Citrus Sinensis ID: 027744
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 219 | 2.2.26 [Sep-21-2011] | |||||||
| P33368 | 253 | Uncharacterized oxidoredu | N/A | no | 0.867 | 0.750 | 0.287 | 1e-14 | |
| Q29529 | 244 | Carbonyl reductase [NADPH | yes | no | 0.794 | 0.713 | 0.280 | 2e-14 | |
| P42556 | 289 | Pteridine reductase 1 OS= | N/A | no | 0.616 | 0.467 | 0.331 | 3e-14 | |
| P51831 | 246 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.643 | 0.573 | 0.333 | 1e-13 | |
| Q8CPI3 | 244 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.776 | 0.696 | 0.309 | 4e-12 | |
| Q5HPW0 | 244 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.776 | 0.696 | 0.309 | 4e-12 | |
| O53927 | 270 | Uncharacterized oxidoredu | no | no | 0.652 | 0.529 | 0.315 | 1e-11 | |
| Q01782 | 288 | Pteridine reductase 1 OS= | yes | no | 0.671 | 0.510 | 0.307 | 1e-11 | |
| P08074 | 244 | Carbonyl reductase [NADPH | yes | no | 0.789 | 0.709 | 0.290 | 1e-11 | |
| O80713 | 257 | Short-chain dehydrogenase | no | no | 0.835 | 0.712 | 0.288 | 2e-11 |
| >sp|P33368|YOHF_ECOLI Uncharacterized oxidoreductase YohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2 | Back alignment and function desciption |
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Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVK 69
E+V LD+ EGA A++K Q LG +D V+ G M L + DE++K+
Sbjct: 55 EIVQLDLGNLPEGAL--ALEKLIQRLGRIDVLVN---NAGAMTKAPFLDMAFDEWRKIFT 109
Query: 70 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 129
++ + + R+M + GG I+ +TS+ E P A+AY A ++ L +
Sbjct: 110 VDVDGAFLCSQIAARQMVKQGQGGRIINITSV--HEHTPLPDASAYTAAKHALGGLTKAM 167
Query: 130 AMEIGKHKIRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
A+E+ +HKI VN +A G ++ D+ + E ++ L R A +++AS
Sbjct: 168 ALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGA--------THEIAS 219
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSITRPRMR 216
V++L S+G+ Y TG ++ VDG + P+
Sbjct: 220 LVVWLCSEGANYTTGQSLIVDGGFMLANPQFN 251
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Escherichia coli (strain K12) (taxid: 83333) EC: 1EC: .EC: -EC: .EC: -EC: .EC: - |
| >sp|Q29529|CBR2_PIG Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1 | Back alignment and function description |
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Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
EA ++A +G +D V+ MQ L ++ F + +N + + + + V R M
Sbjct: 65 EATERALGGVGPVDLLVNNAAV-ALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMI 123
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
E GSIV ++S++ YPG AAY + ++ L ++ AME+G HKIRVN + +
Sbjct: 124 ERGVPGSIVNVSSMV--SHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTV 181
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
L + ++E P+ ++ +V+ D+ +++++L+SD S +G++I+VD
Sbjct: 182 VLTAMGRSVTSDPELARKLKERHPMRKFAEVE-DVVNSILFLLSDRSASTSGSSIFVD 238
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May function in the pulmonary metabolism of endogenous carbonyl compounds, such as aliphatic aldehydes and ketones derived from lipid peroxidation, 3-ketosteroids and fatty aldehydes, as well as in xenobiotic metabolism. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|P42556|PTR1_LEITA Pteridine reductase 1 OS=Leishmania tarentolae GN=PTR1 PE=1 SV=1 | Back alignment and function description |
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Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 71 NFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
N +AP+FL+KA +R+ +++A SIV + + ++ L G Y ++ L
Sbjct: 148 NAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLL--GYTMYTMAKEALEGL 205
Query: 126 VRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
R+AA+E+ +IRVNG++ GL L D+ P +V ++ R PL++ +++
Sbjct: 206 TRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQED-----YRRKVPLYQRNSSAEEVSD 260
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSITR 212
VI+L S ++Y+TGT I VDG S+TR
Sbjct: 261 VVIFLCSPKAKYITGTCIKVDGGYSLTR 288
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Exhibits a NADPH-dependent biopterin reductase activity. Has good activity with folate and significant activity with dihydrofolate and dihydrobiopterin, but not with quinonoid dihydrobiopterin. Confers resistance to methotrexate (MTX). Leishmania tarentolae (taxid: 5689) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 3 EC: 3 |
| >sp|P51831|FABG_BACSU 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Bacillus subtilis (strain 168) GN=fabG PE=3 SV=3 | Back alignment and function description |
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Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 12/153 (7%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+++ EDE+ ++ IN + KAV R+M + ++G I+ ++SI+G PG A Y
Sbjct: 99 MRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSG-RIINVSSIVGVSGN--PGQANYV 155
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLH 173
A A + L +++A E+ I VN IA G + D+ V Q+ +K + PL
Sbjct: 156 AAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDV-QDEMLKQI----PLA 210
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R+ + +D++S V +L S+G+RYMTG T+++DG
Sbjct: 211 RFGE-PSDVSSVVTFLASEGARYMTGQTLHIDG 242
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Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 0 |
| >sp|Q8CPI3|FABG_STAES 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1 | Back alignment and function description |
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Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRR 85
E + + G++D V+ G +D L ++ E E+ ++ N + ++ V +
Sbjct: 69 EMIKEVVSQFGSVDVLVN---NAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQ 125
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
M ++G +I+ LTSI+GA PG A Y A A + L +TAA E+ I VN +A
Sbjct: 126 MLRQRSG-AIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELASRGITVNAVAP 182
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
G + D A+ + +++ E PL R+ + D+A+TV +L SD ++Y+TG TI+V+
Sbjct: 183 GFIVSD-MTNALSDDLKDQML-EQIPLKRFGE-DTDIANTVAFLASDKAKYITGQTIHVN 239
Query: 206 G 206
G
Sbjct: 240 G 240
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Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 0 |
| >sp|Q5HPW0|FABG_STAEQ 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1 | Back alignment and function description |
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Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRR 85
E + + G++D V+ G +D L ++ E E+ ++ N + ++ V +
Sbjct: 69 EMIKEVVSQFGSVDVLVN---NAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQ 125
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
M ++G +I+ LTSI+GA PG A Y A A + L +TAA E+ I VN +A
Sbjct: 126 MLRQRSG-AIINLTSIVGAMGN--PGQANYVATKAGVIGLTKTAARELASRGITVNAVAP 182
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
G + D A+ + +++ E PL R+ + D+A+TV +L SD ++Y+TG TI+V+
Sbjct: 183 GFIVSD-MTNALSDDLKDQML-EQIPLKRFGE-DTDIANTVAFLASDKAKYITGQTIHVN 239
Query: 206 G 206
G
Sbjct: 240 G 240
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Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 0 EC: 0 |
| >sp|O53927|Y1714_MYCTU Uncharacterized oxidoreductase Rv1714/MT1753.1 OS=Mycobacterium tuberculosis GN=Rv1714 PE=3 SV=1 | Back alignment and function description |
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Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
++F ++ N W + +A GR + E GGS+V ++S+ G G G +AY A
Sbjct: 119 EDFDAVMDANVRGAWLVCRAAGRVLLEQGQGGSVVLVSSVRGG-LGNAAGYSAYCPSKAG 177
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA----PLHRWLD 177
L +T A E G H IRVN +A + + + REA PL R+ +
Sbjct: 178 TDLLAKTLAAEWGGHGIRVNALAPTVFRSAVTEWMFTDDPKGRATREAMLARIPLRRFAE 237
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D +IYL+SD S + TG +Y+DG
Sbjct: 238 -PEDFVGALIYLLSDASSFYTGQVMYLDG 265
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Mycobacterium tuberculosis (taxid: 1773) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q01782|PTR1_LEIMA Pteridine reductase 1 OS=Leishmania major GN=PTR1 PE=1 SV=2 | Back alignment and function description |
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Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPGAAAYGA 117
E L N +AP+FL+KA R + A G + + + G Y
Sbjct: 137 ETATADLFGSNAIAPYFLIKAFAHRFAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 196
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWL 176
++ L R+AA+E+ +IRVNG+ GL L D+ P AV + R PL++
Sbjct: 197 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGH-----RSKVPLYQRD 251
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+++ VI+L S ++Y+TGT + VDG S+TR
Sbjct: 252 SSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 287
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Exhibits a NADPH-dependent biopterin reductase activity. Has good activity with folate and significant activity with dihydrofolate and dihydrobiopterin, but not with quinonoid dihydrobiopterin. Confers resistance to methotrexate (MTX). Leishmania major (taxid: 5664) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 3 EC: 3 |
| >sp|P08074|CBR2_MOUSE Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+A +KA +G +D V+ MQ L+V ++ F + +N + + + + V R M
Sbjct: 65 DATEKALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 123
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
GSIV ++S++ +P Y + ++ L + AME+G HKIRVN + +
Sbjct: 124 NRGVPGSIVNVSSMVA--HVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 181
Query: 148 HLQDE-YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
L D ++ E A KL +E PL ++ +V+ D+ +++++L+SD S +G I VD
Sbjct: 182 VLTDMGKKVSADPEFARKL-KERHPLRKFAEVE-DVVNSILFLLSDRSASTSGGGILVD 238
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May function in the pulmonary metabolism of endogenous carbonyl compounds, such as aliphatic aldehydes and ketones derived from lipid peroxidation, 3-ketosteroids and fatty aldehydes, as well as in xenobiotic metabolism. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 17 DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP---LQVGEDEFKKLVKINFV 73
D+ ++E + AV + G LD ++ G M+ P L + ++F + + +N
Sbjct: 63 DVTNEKE--VENAVKFTVEKYGKLDVL---FSNAGVMEQPGSFLDLNLEQFDRTMAVNVR 117
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
+K R M E GSIV TS+ G PG AY A ++ LV++A +
Sbjct: 118 GAAAFIKHAARAMVEKGTRGSIVCTTSVASEIGG--PGPHAYTASKHALLGLVKSACGGL 175
Query: 134 GKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVRE---AAPLHRWLDVK-NDLAST 185
GK+ IRVNG+A Y +A E V++V E A + + + +K +A
Sbjct: 176 GKYGIRVNGVA-------PYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEA 228
Query: 186 VIYLISDGSRYMTGTTIYVDGAQSITRP 213
++L SD S Y++G + VDG S+ +P
Sbjct: 229 ALFLASDDSAYVSGQNLAVDGGYSVVKP 256
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Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 219 | ||||||
| TAIR|locus:2078693 | 296 | AT3G01980 [Arabidopsis thalian | 0.771 | 0.570 | 0.633 | 2.9e-66 | |
| TAIR|locus:2100621 | 280 | AT3G55290 [Arabidopsis thalian | 0.904 | 0.707 | 0.326 | 1.8e-23 | |
| TAIR|locus:505006251 | 312 | AT2G17845 [Arabidopsis thalian | 0.917 | 0.644 | 0.326 | 2.9e-23 | |
| TAIR|locus:2100636 | 279 | AT3G55310 [Arabidopsis thalian | 0.904 | 0.709 | 0.311 | 5.5e-22 | |
| TAIR|locus:2031376 | 282 | AT1G63380 [Arabidopsis thalian | 0.926 | 0.719 | 0.300 | 3e-21 | |
| TAIR|locus:2075296 | 288 | AT3G46170 [Arabidopsis thalian | 0.876 | 0.666 | 0.311 | 1e-20 | |
| UNIPROTKB|P33368 | 253 | yohF "predicted oxidoreductase | 0.894 | 0.774 | 0.290 | 2.6e-15 | |
| CGD|CAL0001490 | 260 | orf19.5763 [Candida albicans ( | 0.643 | 0.542 | 0.301 | 6.9e-15 | |
| UNIPROTKB|Q5A8I5 | 260 | SPS19 "Putative uncharacterize | 0.643 | 0.542 | 0.301 | 6.9e-15 | |
| TIGR_CMR|CBU_1514 | 166 | CBU_1514 "oxidoreductase, shor | 0.680 | 0.897 | 0.326 | 2.1e-13 |
| TAIR|locus:2078693 AT3G01980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 563 (203.2 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 107/169 (63%), Positives = 131/169 (77%)
Query: 51 GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP 110
GK+QD LQV +DEF ++ KIN APWFLLKAV RMK+ +GGSIVF+ +I ER LYP
Sbjct: 128 GKVQDILQVSQDEFHRITKINLTAPWFLLKAVATRMKDHGSGGSIVFMATIASGERALYP 187
Query: 111 XXXXXXXXXXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170
+IHQLVR +AM +GKHKIRVN I+RGLHL DEY +VG++RA KLV++AA
Sbjct: 188 GADAYASTSAAIHQLVRASAMSLGKHKIRVNMISRGLHLDDEYTASVGRDRAQKLVKDAA 247
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 219
PL +WL+ DL STVIYLISDGSR+MTGTT+ VDGAQS+TRPR++SYM
Sbjct: 248 PLGQWLNPDTDLYSTVIYLISDGSRFMTGTTVLVDGAQSLTRPRLKSYM 296
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| TAIR|locus:2100621 AT3G55290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 66/202 (32%), Positives = 104/202 (51%)
Query: 11 VEVVGLDMEEDREGA-FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVK 69
++ L+++ + A +AV +A I G +DA ++ G ++ L + EDE+ + K
Sbjct: 72 IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFK 131
Query: 70 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTA 129
N PW + K V M+++K GGS++ ++SI G RG+ P + + R
Sbjct: 132 TNLKGPWLVSKHVCMLMRDAKRGGSVINISSIAGI-RGMLPGGLAYACSKGGVDTMSRMM 190
Query: 130 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIY 188
A+E+G HKIRVN IA GL + E + Q+ +K V E PL V L S V Y
Sbjct: 191 ALELGVHKIRVNSIAPGL-FKSEITQGLMQKEWLKNVTERTVPLKVQQTVDPGLTSLVRY 249
Query: 189 LISDGSRYMTGTTIYVDGAQSI 210
LI D S+Y++G T VD ++
Sbjct: 250 LIHDSSQYISGNTYIVDSGATL 271
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| TAIR|locus:505006251 AT2G17845 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 67/205 (32%), Positives = 104/205 (50%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G E + LD+ D +AV KA +I G +DA ++ + G ++ L + EDE+ K+
Sbjct: 101 GIQAEALELDVSSDA-ATVQKAVKKAWEIFGKIDALINNAGFRGNVKSSLDLSEDEWDKV 159
Query: 68 VKINFVAPWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLV 126
K N W + K V M+++K GGS++ ++S+ RG P + +
Sbjct: 160 FKTNLTGTWLVSKYVCILMRDAKRGGGSVINISSVSWLHRGQVPGGVAYACSKGGVDTMT 219
Query: 127 RTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLAST 185
R A+E+G +KIRVN IA GL L+ E + Q+ +K V E PL V L S
Sbjct: 220 RMMALELGVYKIRVNSIAPGL-LKSEITQGLMQKEWLKTVIERTVPLKVQQTVDPGLTSL 278
Query: 186 VIYLISDGSRYMTGTTIYVDGAQSI 210
+ YL+ D S+Y++G T VD S+
Sbjct: 279 LRYLVHDSSKYISGNTYIVDAGASL 303
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| TAIR|locus:2100636 AT3G55310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 63/202 (31%), Positives = 103/202 (50%)
Query: 11 VEVVGLDMEEDREGA-FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVK 69
++ L+++ + A +AV +A I G +DA ++ G ++ L + EDE+ +
Sbjct: 71 IQAAALELDVSSDAATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVFN 130
Query: 70 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTA 129
N PW + K V M+++K GGS++ ++S+ G R + P + + R
Sbjct: 131 TNLKGPWLVAKYVCVLMRDAKRGGSVINISSVAGV-RSIVPGGLAYSCSKGGVDTMSRMM 189
Query: 130 AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIY 188
A+E+G HKIRVN IA GL + E A+ Q+ +K V E PL + L S V Y
Sbjct: 190 AIELGVHKIRVNSIAPGL-FKSEITQALMQKEWLKNVTERTVPLKVQQTIDPGLTSLVRY 248
Query: 189 LISDGSRYMTGTTIYVDGAQSI 210
LI D S+Y++G T VD ++
Sbjct: 249 LIHDSSQYISGNTYIVDSGATL 270
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| TAIR|locus:2031376 AT1G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 62/206 (30%), Positives = 102/206 (49%)
Query: 7 GGQPVEVVGLDMEEDREG-AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G V+ V L+++ E +AV +A + G +D ++ G ++ L + E+E+
Sbjct: 67 GAIGVQAVALELDVSSEADTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSEEEWD 126
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQL 125
K+ + N W + K V M++++ GGS++ ++SI G RGL + +
Sbjct: 127 KVFRTNLTGSWLISKYVCLLMRDAERGGSVINVSSISGLHRGLLRGGLAYACSKGGVDTM 186
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLAS 184
R A+E+ +KIRVN IA G+ + E + Q+ +K V E PL V L S
Sbjct: 187 TRMMAIELAVYKIRVNSIAPGI-FRSEITQGLFQKEWLKKVTEKVVPLKMQQTVDPGLTS 245
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSI 210
V YLI D S+Y+TG T VD ++
Sbjct: 246 LVRYLIHDSSQYVTGNTYIVDSGTTL 271
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| TAIR|locus:2075296 AT3G46170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 61/196 (31%), Positives = 97/196 (49%)
Query: 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 75
LD+ D + V A I G +DA ++ G ++ L + ++E+ + K N P
Sbjct: 87 LDVTSDA-ATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVFKTNLTGP 145
Query: 76 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQLVRTAAMEIGK 135
W + K V M+++K GGS++ ++SI G RG+ P + + + A+E+G
Sbjct: 146 WLVSKYVCVLMRDAKLGGSVINISSIAGI-RGILPGALAYACSKIGVDTMSKMMAVELGV 204
Query: 136 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLISDGS 194
HKIRVN IA G+ + E + Q+ K V E PL V + S V YLI D S
Sbjct: 205 HKIRVNSIAPGI-FKSEITQGLMQKEWFKNVTERTVPLKLQQTVDPGITSLVRYLIHDSS 263
Query: 195 RYMTGTTIYVDGAQSI 210
+Y++G T VD ++
Sbjct: 264 QYISGNTYIVDSGATL 279
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| UNIPROTKB|P33368 yohF "predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 61/210 (29%), Positives = 103/210 (49%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDP-LQVGEDEFK 65
G E+V LD+ EGA A++K Q LG +D V+ G M + P L + DE++
Sbjct: 51 GVRAEIVQLDLGNLPEGAL--ALEKLIQRLGRIDVLVN---NAGAMTKAPFLDMAFDEWR 105
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXXSIHQL 125
K+ ++ + + R+M + GG I+ +TS+ E P ++ L
Sbjct: 106 KIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSV--HEHTPLPDASAYTAAKHALGGL 163
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRWLDVKNDLAS 184
+ A+E+ +HKI VN +A G P+ + VK E + PL R+ +++AS
Sbjct: 164 TKAMALELVRHKILVNAVAPGAIAT---PMNGMDDSDVKPDAEPSIPLRRF-GATHEIAS 219
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSITRPR 214
V++L S+G+ Y TG ++ VDG + P+
Sbjct: 220 LVVWLCSEGANYTTGQSLIVDGGFMLANPQ 249
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| CGD|CAL0001490 orf19.5763 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXX 120
+D+F ++K++ P L KA+G++M E+ G IVF S++ + G+
Sbjct: 115 QDKFDDVIKVDLNIPVKLTKAIGKKMLETNTKGKIVFTASLLSFQGGML--STPYAISKG 172
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
++ Q + + E IRVN IA G +++ ++ +E K+V P+ RW + +
Sbjct: 173 ALKQFTQAVSNEWSSRGIRVNSIAPG-YIKTNLTDSMSEENK-KIVDLRIPMKRWGN-PD 229
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
D ++YL SD S+Y+TG T+ VDG
Sbjct: 230 DFMGPIVYLTSDASKYVTGDTLLVDG 255
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| UNIPROTKB|Q5A8I5 SPS19 "Putative uncharacterized protein SPS19" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXXXX 120
+D+F ++K++ P L KA+G++M E+ G IVF S++ + G+
Sbjct: 115 QDKFDDVIKVDLNIPVKLTKAIGKKMLETNTKGKIVFTASLLSFQGGML--STPYAISKG 172
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
++ Q + + E IRVN IA G +++ ++ +E K+V P+ RW + +
Sbjct: 173 ALKQFTQAVSNEWSSRGIRVNSIAPG-YIKTNLTDSMSEENK-KIVDLRIPMKRWGN-PD 229
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
D ++YL SD S+Y+TG T+ VDG
Sbjct: 230 DFMGPIVYLTSDASKYVTGDTLLVDG 255
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| TIGR_CMR|CBU_1514 CBU_1514 "oxidoreductase, short chain dehydrogenase/reductase family" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 50/153 (32%), Positives = 76/153 (49%)
Query: 59 VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPXXXXXXXX 118
V E++F + + +N P+FL +AV + M GSI+ ++SI + L
Sbjct: 16 VTEEQFNQAINVNLKGPFFLTQAVAKHMIAHSKTGSIINISSISSFKAELNISAYECAKA 75
Query: 119 XXSIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVGQERAVKLVREAAPLHRWLD 177
S+ L ++AA+ + H IRVN I+ GL D PI R + + PL R +
Sbjct: 76 GESM--LTKSAALALAPHHIRVNTISPGLTATDMTQPINDPLARPLSERAQPIPLGR-VG 132
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
D A I+L SD S ++TG+ I VDG +SI
Sbjct: 133 QPKDHAGAAIFLASDESSWITGSNIIVDGGESI 165
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00037883001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (266 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | HPLA | SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (487 aa) | • | 0.483 | |||||||
 | ADH3 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (381 aa) | • | 0.483 | |||||||
 | CCD1 | SubName- Full=Chromosome chr13 scaffold_45, whole genome shotgun sequence; (542 aa) | • | 0.481 | |||||||
 | GSVIVG00030690001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (320 aa) | • | 0.462 | |||||||
 | GSVIVG00021545001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (215 aa) | • | 0.454 | |||||||
 | GSVIVG00030697001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (319 aa) | • | 0.447 | |||||||
 | GSVIVG00025486001 | SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (248 aa) | • | 0.447 | |||||||
 | GSVIVG00017972001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (332 aa) | • | 0.438 | |||||||
 | GSVIVG00016740001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (517 aa) | • | 0.436 | |||||||
 | GSVIVG00021145001 | SubName- Full=Chromosome chr1 scaffold_22, whole genome shotgun sequence; (345 aa) | • | 0.433 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 219 | |||
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-31 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-25 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 2e-25 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 3e-24 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-23 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 4e-23 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 6e-23 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-21 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 1e-20 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 2e-20 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 1e-19 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 1e-19 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 6e-19 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-19 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 1e-18 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 2e-18 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 3e-18 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 3e-18 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 5e-18 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 5e-18 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 8e-18 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 9e-18 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 1e-17 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 2e-17 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 3e-17 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 3e-17 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 5e-17 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 6e-17 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 8e-17 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 1e-16 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 1e-16 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-16 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 1e-16 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 2e-16 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 4e-16 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 5e-16 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 6e-16 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 7e-16 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 7e-16 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 8e-16 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 1e-15 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 1e-15 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 1e-15 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 3e-15 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 3e-15 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 4e-15 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 5e-15 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 5e-15 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 7e-15 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 8e-15 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 8e-15 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 9e-15 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 2e-14 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 3e-14 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 6e-14 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-14 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 1e-13 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 2e-13 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 2e-13 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 2e-13 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 2e-13 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 4e-13 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 5e-13 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 6e-13 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 7e-13 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 8e-13 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 1e-12 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 1e-12 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 2e-12 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 2e-12 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 2e-12 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 2e-12 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 2e-12 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 2e-12 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 3e-12 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 3e-12 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 3e-12 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 6e-12 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 8e-12 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 9e-12 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-11 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 3e-11 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 6e-11 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 7e-11 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 8e-11 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 1e-10 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-10 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 2e-10 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 3e-10 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 6e-10 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 7e-10 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 8e-10 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 8e-10 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 8e-10 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 9e-10 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 1e-09 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 1e-09 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 2e-09 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 2e-09 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 2e-09 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 3e-09 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-09 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 4e-09 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 4e-09 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 5e-09 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 6e-09 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 6e-09 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 9e-09 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 1e-08 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 1e-08 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 1e-08 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 2e-08 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 2e-08 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 2e-08 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 3e-08 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 3e-08 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-08 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 3e-08 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 4e-08 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 6e-08 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 9e-08 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 1e-07 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 1e-07 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-07 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-07 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 3e-07 | |
| PRK06505 | 271 | PRK06505, PRK06505, enoyl-(acyl carrier protein) r | 3e-07 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 3e-07 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 4e-07 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 6e-07 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 6e-07 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 7e-07 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 8e-07 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 9e-07 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 9e-07 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 1e-06 | |
| PRK08690 | 261 | PRK08690, PRK08690, enoyl-(acyl carrier protein) r | 1e-06 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 1e-06 | |
| PRK06603 | 260 | PRK06603, PRK06603, enoyl-(acyl carrier protein) r | 2e-06 | |
| PRK06997 | 260 | PRK06997, PRK06997, enoyl-(acyl carrier protein) r | 3e-06 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 3e-06 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 3e-06 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 3e-06 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 3e-06 | |
| PLN02730 | 303 | PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r | 4e-06 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 4e-06 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-06 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 7e-06 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 8e-06 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 9e-06 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 1e-05 | |
| PRK07889 | 256 | PRK07889, PRK07889, enoyl-(acyl carrier protein) r | 1e-05 | |
| PRK07984 | 262 | PRK07984, PRK07984, enoyl-(acyl carrier protein) r | 2e-05 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 2e-05 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 2e-05 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 2e-05 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 2e-05 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 2e-05 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 3e-05 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 3e-05 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 3e-05 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 4e-05 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 4e-05 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 4e-05 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 5e-05 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 7e-05 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-05 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 1e-04 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 2e-04 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 2e-04 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 2e-04 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 2e-04 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 2e-04 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 3e-04 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 4e-04 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 4e-04 | |
| PRK06300 | 299 | PRK06300, PRK06300, enoyl-(acyl carrier protein) r | 9e-04 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 0.001 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 0.001 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 0.001 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 0.001 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 0.002 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 0.002 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 0.004 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 3e-31
Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E + V++A + G LD V+ + ++ ++++ +++ +N + L +A
Sbjct: 58 EEDVEALVEEALEEFGRLDILVNN-AGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAA 116
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
MK+ GG IV ++S+ R PG AAY A A++ L R+ A+E+ + IRVN
Sbjct: 117 LPHMKKQG-GGRIVNISSV-AGLRP-LPGQAAYAASKAALEGLTRSLALELAPYGIRVNA 173
Query: 143 IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
+A GL +G E A K + A PL R + ++A V++L SD + Y+TG I
Sbjct: 174 VAPGLVDTPMLA-KLGPEEAEKELAAAIPLGRLGTPE-EVAEAVVFLASDEASYITGQVI 231
Query: 203 YVD 205
VD
Sbjct: 232 PVD 234
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 1e-25
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
GG V D+ +D E + V A + G +D V+ G ++ E+++
Sbjct: 54 AGGGRAAAVAADVSDDEESV-EALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWD 112
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+++ +N + + L +A MK+ IV ++S+ G G PG AAY A A++ L
Sbjct: 113 RVIDVNLLGAFLLTRAALPLMKK----QRIVNISSVAG--LGGPPGQAAYAASKAALIGL 166
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER-AVKLVREAAPLHRWLDVKNDLAS 184
+ A+E+ IRVN +A G E A+K + PL R + ++A+
Sbjct: 167 TKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPE-EVAA 225
Query: 185 TVIYLISDG-SRYMTGTTIYVDGAQS 209
V +L SD + Y+TG T+ VDG
Sbjct: 226 AVAFLASDEAASYITGQTLPVDGGLL 251
|
Length = 251 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 2e-25
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 31/210 (14%)
Query: 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDP-LQVGEDEFKK 66
P +V+ LD+ D DE +K + G +D VH + E + P L + F K
Sbjct: 45 PADVIPLDVTSD--EDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLK 102
Query: 67 LVKIN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ I+ F++ L KA M E GGSIV L+ I AER ++PG G A++
Sbjct: 103 ALDISAYSFIS---LAKAAKPLMNE---GGSIVALSYI-AAER-VFPGYGGMGVAKAALE 154
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-------AVGQERAVKLVREAAPLHRWL 176
L R A E+G+ IRVN I+ G P G ++ V+ E APL R
Sbjct: 155 SLARYLAYELGRKGIRVNTISAG-------PTKTTAGSGIGGFDKMVEYAEEMAPLGRNA 207
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+ +L+SD +R +TG +YVDG
Sbjct: 208 SAE-EVANAAAFLLSDLARGITGQILYVDG 236
|
Length = 239 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 3e-24
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 6 KGGQPVEVVGLDME--EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
GG+ VV D+ +D E F ++ G LD V G + ++
Sbjct: 46 LGGK-AVVVRADVSQPQDVEEMFAAVKER----FGRLDVLVSN-AAAGAFRPLSELTPAH 99
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ + N A + + M+E GG IV ++S+ G+ R P A G A++
Sbjct: 100 WDAKMNTNLKALVHCAQQAAKLMRERG-GGRIVAISSL-GSIR-ALPNYLAVGTAKAALE 156
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
LVR A+E+G IRVN ++ G+ D +E ++ P R D+A
Sbjct: 157 ALVRYLAVELGPRGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTP-QDVA 215
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQSI 210
V +L SD +R +TG T+ VDG SI
Sbjct: 216 DAVGFLCSDAARMITGQTLVVDGGLSI 242
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 92.9 bits (232), Expect = 4e-23
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 33/214 (15%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG------- 60
G V+ D+ + E A ++ A + G LD V+ G
Sbjct: 53 GGEARVLVFDVSD--EAAVRALIEAAVEAFGALDILVNN------------AGITRDALL 98
Query: 61 ----EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
E+++ +++ +N + +++A M +++ G IV ++S+ G PG Y
Sbjct: 99 PRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVT--GNPGQTNYS 155
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRW 175
A A + + A+E+ I VN +A G + + G VK PL R
Sbjct: 156 AAKAGVIGFTKALALELASRGITVNAVAPGF---IDTDMTEGLPEEVKAEILKEIPLGRL 212
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209
+ ++A+ V +L SD + Y+TG I V+G
Sbjct: 213 GQPE-EVANAVAFLASDAASYITGQVIPVNGGMY 245
|
Length = 246 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 4e-23
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 24 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83
A AV + G LD V + ++ ++++++++ +N + L +A
Sbjct: 68 AALKAAVAAGVEDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAAL 126
Query: 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
+ + GG IV +S+ G G YPG A Y A A + R A+E+ I VN +
Sbjct: 127 PALIRA-GGGRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALELAARNITVNSV 184
Query: 144 ARGLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 197
G + +G + + + A PL R + + D+A+ V++L SD +RY+
Sbjct: 185 HPGG-------VDTPMAGNLGDAQWAEAIAAAIPLGRLGEPE-DIAAAVLFLASDEARYI 236
Query: 198 TGTTIYVDG 206
TG T+ VDG
Sbjct: 237 TGQTLPVDG 245
|
Length = 251 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 6e-23
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
FK ++ I+ + KAVG+R+ E+K GGSI+ +++ A G P A A +
Sbjct: 105 FKTVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNISAT-YAYTGS-PFQVHSAAAKAGVD 162
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRW 175
L R+ A+E G + IRVN IA G PI ++ K + E PL R
Sbjct: 163 ALTRSLAVEWGPYGIRVNAIAPG-------PIPTTEGMERLAPSGKSEKKMIERVPLGRL 215
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
++A+ ++L+SD + Y+ GTT+ VDG Q +
Sbjct: 216 -GTPEEIANLALFLLSDAASYINGTTLVVDGGQWL 249
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 88.3 bits (220), Expect = 2e-21
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80
E + AV A + G++D V+ + L V E EF ++ +N +P+ +
Sbjct: 63 SDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQ 122
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC-AASIHQLVRTAAMEIGKHKIR 139
A M+ GG+IV + S R PG Y A A I L + A E+G KIR
Sbjct: 123 AAVPAMRGEG-GGAIVNVAST-AGLRP-RPGLGWYNASKGAVIT-LTKALAAELGPDKIR 178
Query: 140 VNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 195
VN +A + L+ + RA PL R L D+A+ ++L SD +
Sbjct: 179 VNAVAPVVVETGLLEAFMGEPTPENRAK--FLATIPLGR-LGTPEDIANAALFLASDEAS 235
Query: 196 YMTGTTIYVDGAQSIT 211
++TG T+ VDG + +
Sbjct: 236 WITGVTLVVDGGRCVG 251
|
Length = 251 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 1e-20
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVK 69
V + + D A + G LD V+ G + + + +++++ +
Sbjct: 60 VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDE---ITPEQWEQTLA 116
Query: 70 INFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 129
+N ++ +A +K S GG I+ L+S+ G R YPG Y A ++ LV++
Sbjct: 117 VNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG--RLGYPGRTPYAASKWAVVGLVKSL 174
Query: 130 AMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVR------EAAPLHRWLDVKN 180
A+E+G IRVN I G+ A Q+ + L E L R ++
Sbjct: 175 AIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEP-E 233
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
D+A+T ++L S +RY+TG I VDG
Sbjct: 234 DIAATALFLASPAARYITGQAISVDG 259
|
Length = 264 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 2e-20
Identities = 63/188 (33%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 23 EGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
A + V A + G D V+ + Q ED + +L IN AP+ L+
Sbjct: 62 FAACADLVAAAFRAFGRCDVLVNNASAFYPT----PLGQGSEDAWAELFGINLKAPYLLI 117
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+A RR+ S GSI+ + + +R L G AY A++ L R+AA+E+ IR
Sbjct: 118 QAFARRLAGS-RNGSIINIIDAM-TDRPL-TGYFAYCMSKAALEGLTRSAALELAP-NIR 173
Query: 140 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
VNGIA GL L E A +E A++ V PL R + ++A VI+L+ S Y+TG
Sbjct: 174 VNGIAPGLILLPEDMDAEYRENALRKV----PLKRRPSAE-EIADAVIFLLD--SNYITG 226
Query: 200 TTIYVDGA 207
I VDG
Sbjct: 227 QIIKVDGG 234
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 1e-19
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQVGE 61
G V D+ FD A + G +D V+ G M + E
Sbjct: 50 AAGGKAIAVQADVSDPSQVARLFDAAE----KAFGGVDILVN---NAGVMLKKPIAETSE 102
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+EF ++ +N +F+L+ +R+++ GG I+ ++S + A P AY A+
Sbjct: 103 EEFDRMFTVNTKGAFFVLQEAAKRLRD---GGRIINISSSLTAAY--TPNYGAYAGSKAA 157
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ R A E+G I VN +A G D + A E AV+ + +PL R + + D
Sbjct: 158 VEAFTRVLAKELGGRGITVNAVAPGPVDTDMF-YAGKTEEAVEGYAKMSPLGRLGEPE-D 215
Query: 182 LASTVIYLISDGSRYMTGTTIYVDG 206
+A V +L S R++ G I +G
Sbjct: 216 IAPVVAFLASPDGRWVNGQVIRANG 240
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.6 bits (207), Expect = 1e-19
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 5/198 (2%)
Query: 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLV 68
+ VE + E A AV+ + G +D V+ + + E E++ ++
Sbjct: 52 EGVEATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGI-IRRHPAEEFPEAEWRDVI 110
Query: 69 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 128
+N +F+ +AV R M + G I+ + S++ +E G P AY A + L +
Sbjct: 111 DVNLNGVFFVSQAVARHMIKQG-HGKIINICSLL-SELG-GPPVPAYAASKGGVAGLTKA 167
Query: 129 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
A E +H I+VN IA G + V + + P RW + DL ++
Sbjct: 168 LATEWARHGIQVNAIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPE-DLVGAAVF 226
Query: 189 LISDGSRYMTGTTIYVDG 206
L SD S Y+ G I+VDG
Sbjct: 227 LASDASDYVNGQIIFVDG 244
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 6e-19
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINF 72
L M+ E E ++ + G +D V+ M L +EF +L IN
Sbjct: 54 HALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINL 113
Query: 73 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 132
+ + + R M E G +IV + S G L P AY A A++ L R+ A E
Sbjct: 114 TGAYLVAREALRLMIEQGHGAAIVNVASGAGL-VAL-PKRTAYSASKAAVISLTRSLACE 171
Query: 133 IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL----VREAAPLHRWLDVKNDLASTVIY 188
IRVN + G + ERA KL VR PL R L ++A V +
Sbjct: 172 WAAKGIRVNAVLPG---YVRTQMVAELERAGKLDPSAVRSRIPLGR-LGRPEEIAEAVFF 227
Query: 189 LISDGSRYMTGTTIYVDG 206
L SD + Y+TG+T+ VDG
Sbjct: 228 LASDQASYITGSTLVVDG 245
|
Length = 520 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 81.4 bits (202), Expect = 8e-19
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
E E A DEA + G +D V+ G +D L ++ E+++ +++ N +
Sbjct: 67 AESVERAVDEAKAE----FGGVDILVNN---AGITRDNLLMRMKEEDWDRVIDTNLTGVF 119
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
L KAV R M + + G I+ ++S++G PG A Y A A + ++ A E+
Sbjct: 120 NLTKAVARPMMK-QRSGRIINISSVVGLMGN--PGQANYAASKAGVIGFTKSLARELASR 176
Query: 137 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
I VN +A G D A+ ++ ++ PL R + ++AS V +L SD + Y
Sbjct: 177 GITVNAVAPGFIETDMTD-ALPEDVKEAIL-AQIPLGRLGQPE-EIASAVAFLASDEAAY 233
Query: 197 MTGTTIYVDG 206
+TG T++V+G
Sbjct: 234 ITGQTLHVNG 243
|
Length = 248 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 1e-18
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K+V++N +AP + +A M++ GGSIV + S+ G R PG AAYGA A + L
Sbjct: 101 KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG--RRPSPGTAAYGAAKAGLLNL 158
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
R+ A+E K+RVN + GL ++ + G + V PL R L D+A
Sbjct: 159 TRSLAVEWAP-KVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGR-LATPADIAWA 216
Query: 186 VIYLISDGSRYMTGTTIYVDG 206
++L SD + Y++G + V G
Sbjct: 217 CLFLASDLASYVSGANLEVHG 237
|
Length = 252 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-18
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G E+ LD+ + EGA +A+DK Q LG +D V+ L + DE++K+
Sbjct: 51 GVRAEIRQLDLSDLPEGA--QALDKLIQRLGRIDVLVNN-AGAMTKAPFLDMDFDEWRKI 107
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
++ + + R M + GG I+ +TS+ E PGA+AY A ++ L +
Sbjct: 108 FTVDVDGAFLCSQIAARHMVKQGQGGRIINITSV--HEHTPLPGASAYTAAKHALGGLTK 165
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQERA-VKLV-REAAPLHRWLDVKNDL 182
A+E+ +H I VN +A G IA G + + VK R PL R D ++
Sbjct: 166 AMALELVEHGILVNAVAPG-------AIATPMNGMDDSDVKPDSRPGIPLGRPGDTH-EI 217
Query: 183 ASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 219
AS V +L S+G+ Y TG ++ VDG + P+ S +
Sbjct: 218 ASLVAWLCSEGASYTTGQSLIVDGGFMLANPQFNSEL 254
|
Length = 256 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 3e-18
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFL 78
DRE V++ + LG +D V G +D L + E+++ ++ N + L
Sbjct: 59 DRE-DVKAVVEEIEEELGPIDILV---NNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNL 114
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+AV R M + + G I+ ++S++G G G A Y A A + ++ A E+ I
Sbjct: 115 TQAVLRIMIKQR-SGRIINISSVVGL-MG-NAGQANYAASKAGVIGFTKSLAKELASRNI 171
Query: 139 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
VN +A G D E+ K + PL R ++A+ V +L SD + Y+T
Sbjct: 172 TVNAVAPGFIDTDM--TDKLSEKVKKKILSQIPLGR-FGTPEEVANAVAFLASDEASYIT 228
Query: 199 GTTIYVDG 206
G I+VDG
Sbjct: 229 GQVIHVDG 236
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 3e-18
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 16/187 (8%)
Query: 25 AFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
+ D A LG LD V+ T + + D + ++ +N + +L+A
Sbjct: 70 SVQRFFDAAAAALGGLDGLVNNAGITNSKSATE---LDIDTWDAVMNVNVRGTFLMLRAA 126
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS---IHQLVRTAAMEIGKHKIR 139
+++S G + + GA GA AS + + R+ A E+G I
Sbjct: 127 LPHLRDSGRGRIVNLASDTALW------GAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180
Query: 140 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
VN IA GL + V + + L R V +D+A V++L+SD +R++TG
Sbjct: 181 VNAIAPGLTATEAT-AYVPADERHAYYLKGRALERL-QVPDDVAGAVLFLLSDAARFVTG 238
Query: 200 TTIYVDG 206
+ V+G
Sbjct: 239 QLLPVNG 245
|
Length = 250 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-18
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 22/197 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVA 74
E D A D AV + G LD + + L+ +EF++++ +N
Sbjct: 63 EADVRAAVDTAVAR----FGRLDIMFNNAGVLGAPCYSI---LETSLEEFERVLDVNVYG 115
Query: 75 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
+ K R M +K G SIV + S+ G GL G AY A ++ L R+AA E+G
Sbjct: 116 AFLGTKHAARVMIPAKKG-SIVSVASVAGVVGGL--GPHAYTASKHAVLGLTRSAATELG 172
Query: 135 KHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
+H IRVN ++ P+ E + VR AA L D+A+ V+YL
Sbjct: 173 EHGIRVNCVSPYGVAT---PLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYL 229
Query: 190 ISDGSRYMTGTTIYVDG 206
SD SRY++G + VDG
Sbjct: 230 ASDDSRYVSGQNLVVDG 246
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.2 bits (195), Expect = 5e-18
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E+D E V + G + V+ G + + E++F+ K+N + + L
Sbjct: 60 EQDLEAVVKATVSQ----FGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+ M+++ GG+I+ ++S+ + AAYG+ A+++ + R A ++G I
Sbjct: 116 SQLCAPHMQKA-GGGAILNISSMSSENKN--VRIAAYGSSKAAVNHMTRNLAFDLGPKGI 172
Query: 139 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
RVN +A G D +V + + + PL R L D+A+ ++L S S +++
Sbjct: 173 RVNAVAPGAVKTDALA-SVLTPEIERAMLKHTPLGR-LGEPEDIANAALFLCSPASAWVS 230
Query: 199 GTTIYVDG 206
G + V G
Sbjct: 231 GQVLTVSG 238
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 8e-18
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDP-LQVG 60
GG+ V LD+ D++ A+D+A + G D V+ P L++
Sbjct: 47 AGGKAV-AYKLDVS-DKD-QVFSAIDQAAEKFGGFDVMVNNAGVAPI------TPILEIT 97
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E+E KK+ +N F ++A R+ K+ GG I+ SI G E P +AY +
Sbjct: 98 EEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG--NPILSAYSSTKF 155
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEY----------PIAVGQE---RAVK 164
++ L +TAA E+ I VN G+ + +E PI G E +
Sbjct: 156 AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA 215
Query: 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L R + P D+A V +L S+ S Y+TG +I VDG
Sbjct: 216 LGRPSEP--------EDVAGLVSFLASEDSDYITGQSILVDG 249
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 9e-18
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFVAPWFLLKAVGR 84
++ + + G +D + G L +++ K++ +N + +A +
Sbjct: 74 EKTFKQIQKDFGKIDILIAN---AGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAAAK 130
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
K+ G S++ S+ G AAY A A++ L ++ A+E K+ IRVN I+
Sbjct: 131 IFKKQGKG-SLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSIS 189
Query: 145 RGLHLQD-----EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
G D + + E + L R A P +L +YL SD S Y TG
Sbjct: 190 PGYIDTDLTDFVDKELRKKWESYIPLKRIALP--------EELVGAYLYLASDASSYTTG 241
Query: 200 TTIYVDG 206
+ + +DG
Sbjct: 242 SDLIIDG 248
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.8 bits (194), Expect = 1e-17
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
D V +A +++G++D ++ G + QD L+ G ++ ++ IN +FL +AV +
Sbjct: 71 DSIVSQAVEVMGHIDILIN---NAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAK 127
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+ + GG I+ + S++ + G+ +Y A +++ L R A E+ ++ I VN IA
Sbjct: 128 QFVKQGNGGKIINIASMLSFQGGIR--VPSYTASKSAVMGLTRALATELSQYNINVNAIA 185
Query: 145 RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204
G D + + E P RW +DLA I+L S S Y+TG T+ V
Sbjct: 186 PGYMATDNTAALRADTARNEAILERIPASRW-GTPDDLAGPAIFLSSSASDYVTGYTLAV 244
Query: 205 DG 206
DG
Sbjct: 245 DG 246
|
Length = 251 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 2e-17
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG--EDE 63
G + D+ DRE + V+K G +D V+ G +D L + E++
Sbjct: 46 ALGGNAAALEADVS-DREAV-EALVEKVEAEFGPVDILVNN---AGITRDNLLMRMSEED 100
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ ++ +N + + +AV R M + ++G I+ ++S++G G PG A Y A A +
Sbjct: 101 WDAVINVNLTGVFNVTQAVIRAMIKRRSG-RIINISSVVG-LIG-NPGQANYAASKAGVI 157
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
++ A E+ I VN +A G D E+ + + + PL R L ++A
Sbjct: 158 GFTKSLAKELASRGITVNAVAPGFIDTDM--TDALPEKVKEKILKQIPLGR-LGTPEEVA 214
Query: 184 STVIYLISDGSRYMTGTTIYVDG 206
+ V +L SD + Y+TG ++V+G
Sbjct: 215 NAVAFLASDDASYITGQVLHVNG 237
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 3e-17
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86
D A+ A G D V+C ++ L + + F +++ +N + + V R M
Sbjct: 65 DAAIRAALAAAGAFDGLVNCAGI-ASLESALDMTAEGFDRVMAVNARGAALVARHVARAM 123
Query: 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146
+ GGSIV ++S A GL P AY A A++ + R +E+G H IRVN +
Sbjct: 124 IAAGRGGSIVNVSSQ-AALVGL-PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPT 181
Query: 147 LHLQDEYPIAV-----GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 201
+ L P+A Q+ L PL R+ +V +D+A+ +++L+SD + ++G +
Sbjct: 182 VTLT---PMAAEAWSDPQKSGPMLAA--IPLGRFAEV-DDVAAPILFLLSDAASMVSGVS 235
Query: 202 IYVDGAQSIT 211
+ VDG +
Sbjct: 236 LPVDGGYTAR 245
|
Length = 245 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 3e-17
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 25 AFDEAVDKAC----QILGNLDAFVHCYTY---EGKMQDPLQVGEDEFKKLVKIN---FVA 74
+ DE + + + G LD VH + L F K + I+ V+
Sbjct: 62 SNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSLVS 121
Query: 75 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
L KA M GGSIV L S +G+ER + PG G A++ VR A E+G
Sbjct: 122 ---LAKAALPIMNP---GGSIVTL-SYLGSER-VVPGYNVMGVAKAALESSVRYLAYELG 173
Query: 135 KHKIRVNGIARGLHLQDEYPI------AVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVI 187
+ IRVN I+ G PI + ++ ++ + APL R + ++ +T
Sbjct: 174 RKGIRVNAISAG-------PIKTLAASGITGFDKMLEYSEQRAPLGRNVTA-EEVGNTAA 225
Query: 188 YLISDGSRYMTGTTIYVDGAQSI 210
+L+SD S +TG IYVDG I
Sbjct: 226 FLLSDLSSGITGEIIYVDGGYHI 248
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 5e-17
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+A ++A +G +D V+ +Q L+V ++ F + +N A + + V R M
Sbjct: 65 DATEEALGSVGPVDLLVNNAAV-AILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARGMI 123
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
GSIV ++S ++R L Y + A++ L + A+E+G HKIRVN + +
Sbjct: 124 ARGVPGSIVNVSSQA-SQRAL-TNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNPTV 181
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D K + PL ++ +V+ D+ + +++L+SD S TG+T+ VDG
Sbjct: 182 VMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVE-DVVNAILFLLSDKSSMTTGSTLPVDG 239
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 6e-17
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEF 64
G+ VV D+ E G +AV+ G LD V+ G M +P L +
Sbjct: 58 GRRAHVVAADLAHPEATAGLAGQAVEA----FGRLDIVVN--NVGGTMPNPLLSTSTKDL 111
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
N L A M E GGS++ ++S +G G G AAYG A++
Sbjct: 112 ADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG--RGFAAYGTAKAALAH 169
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
R AA+++ +IRVN IA G L + + + +A PL R L D+A+
Sbjct: 170 YTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRR-LGDPEDIAA 227
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215
+YL S Y+TG T+ VDG +T P +
Sbjct: 228 AAVYLASPAGSYLTGKTLEVDGG--LTFPNL 256
|
Length = 263 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 8e-17
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEF 64
G V LD+ R+ + D V A + G +D + + M L + D +
Sbjct: 51 GPAAIAVSLDVT--RQDSIDRIVAAAVERFGGIDILFNNAALFD----MAPILDISRDSY 104
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+L +N +FL++AV R M E GG I+ + S G RG + Y A A++
Sbjct: 105 DRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAG-RRG-EALVSHYCATKAAVIS 162
Query: 125 LVRTAAMEIGKHKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLH 173
++AA+ + +H I VN IA G+ G+++ +LV EA PL
Sbjct: 163 YTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKK--RLVGEAVPLG 220
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
R + V +DL ++L S + Y+ T VDG
Sbjct: 221 R-MGVPDDLTGMALFLASADADYIVAQTYNVDGGN 254
|
Length = 257 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 1e-16
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 6 KGGQPVEVVG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE--- 61
GG+ + V + EED F A+ + G LD V+ +Q E
Sbjct: 51 VGGKAIAVQADVSKEEDVVALFQSAIKE----FGTLDILVN----NAGLQGDASSHEMTL 102
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+++ K++ +N + + +R ++SK G I+ ++S+ E+ +PG Y A
Sbjct: 103 EDWNKVIDVNLTGQFLCAREAIKRFRKSKIKGKIINMSSV--HEKIPWPGHVNYAASKGG 160
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ + +T A E IRVN IA G A + P+ R + +
Sbjct: 161 VKMMTKTLAQEYAPKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEP-EE 219
Query: 182 LASTVIYLISDGSRYMTGTTIYVDG 206
+A+ +L SD + Y+TGTT++VDG
Sbjct: 220 IAAAAAWLASDEASYVTGTTLFVDG 244
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 1e-16
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 2 MGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE 61
+ +LKG V D+ ++ + A AVD A G L VHC + Q+
Sbjct: 51 IEALKGAGAVRYEPADVTDEDQVA--RAVDAATAWHGRLHGVVHCAGGSETIGPITQIDS 108
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
D +++ V +N ++LK R + GGS V ++SI + + GA YG ++
Sbjct: 109 DAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAASNTHRWFGA--YGVTKSA 165
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ L++ AA E+G +RVN I GL D R PL R +V+ D
Sbjct: 166 VDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVE-D 224
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQSITR-PRMRSYM 219
+A+ ++L+SD + ++TG I VDG + R P S +
Sbjct: 225 VANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSML 263
|
Length = 276 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 1e-16
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVH--CYTYEGKMQDPLQVGEDEFK 65
G+ + V D+ D+ A + AV A + G +D V+ + + D + +DE+
Sbjct: 55 GRRAQAVQADVT-DKA-ALEAAVAAAVERFGRIDILVNNAGIFEDKPLAD---MSDDEWD 109
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+++ +N + LL+AV M++ + GG IV ++S+ G PG + Y A A + L
Sbjct: 110 EVIDVNLSGVFHLLRAVVPPMRK-QRGGRIVNISSV-AGLPGW-PGRSNYAAAKAGLVGL 166
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
+ A E+ ++ I VN +A G D + + R K PL R D+A
Sbjct: 167 TKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKD--AETPLGR-SGTPEDIARA 223
Query: 186 VIYLISDGSRYMTGTTIYVDGA 207
V +L SD S Y+TG I V G
Sbjct: 224 VAFLCSDASDYITGQVIEVTGG 245
|
Length = 249 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 1e-16
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGL-YPGAAAYGA 117
E + +L N +AP+FL+KA +R ++A + + + ++ A G Y
Sbjct: 116 EVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTM 175
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
++ L R+AA+E+ +IRVNG+A GL L P A+ E R PL +
Sbjct: 176 AKHALEGLTRSAALELAPLQIRVNGVAPGLSL---LPDAMPFEVQEDY-RRKVPLGQREA 231
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+A VI+L+S ++Y+TGT I VDG S+TR
Sbjct: 232 SAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR 266
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 2e-16
Identities = 61/233 (26%), Positives = 91/233 (39%), Gaps = 46/233 (19%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFK 65
G P +G+ + E A A ++A G +D V G + +++++
Sbjct: 467 GGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSN---AGIAISGPIEETSDEDWR 523
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG--AAAYGACAASIH 123
+ +N + + + R MK GGSIVF I ++ + PG AYGA A+
Sbjct: 524 RSFDVNATGHFLVAREAVRIMKAQGLGGSIVF----IASKNAVNPGPNFGAYGAAKAAEL 579
Query: 124 QLVRTAAMEIGKHKIRVNGIA-----RGLHLQDEYPIAVGQERAVK-------------- 164
LVR A+E+G IRVNG+ RG + + RA
Sbjct: 580 HLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG---EWIEARAAAYGLSEEELEEFYRA 636
Query: 165 ---LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG--AQSITR 212
L RE P D+A V++L S TG I VDG A + R
Sbjct: 637 RNLLKREVTP--------EDVAEAVVFLASGLLSKTTGAIITVDGGNAAAFLR 681
|
Length = 681 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 4e-16
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 29/206 (14%)
Query: 27 DEAVDKACQILGNLDAFVHC-------YTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFL 78
+ V + + G +D V+ + K ++ E F K+ IN + +
Sbjct: 65 NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLM 124
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+AV R+M + G IV ++S G E G + Y A A+++ R+ A E+GKH I
Sbjct: 125 SQAVARQM-VKQHDGVIVNMSSEAGLEGSE--GQSCYAATKAALNSFTRSWAKELGKHNI 181
Query: 139 RVNGIARGL-------HLQDEYPIAVGQERAVKLVRE------AAPLHRW--LDVKNDLA 183
RV G+A G+ + E +A + V+ +R PL R L ++A
Sbjct: 182 RVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS---EVA 238
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQS 209
V YL+SD + Y+TG T + G ++
Sbjct: 239 DLVCYLLSDRASYITGVTTNIAGGKT 264
|
Length = 266 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.0 bits (182), Expect = 5e-16
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+E+++L+ IN + +AV MKE+ GGSI+ ++SI G G P AAY A +
Sbjct: 101 EEWRRLLDINLTGVFLGTRAVIPPMKEA-GGGSIINMSSIEGL-VGD-PALAAYNASKGA 157
Query: 122 IHQLVRTAAMEIGKHK--IRVNGIARGL---HLQDEYPIA---VGQERAVKLVREAAPLH 173
+ L ++AA+E IRVN + G + DE IA +G + R P
Sbjct: 158 VRGLTKSAALECATQGYGIRVNSVHPGYIYTPMTDELLIAQGEMGNYPNTPMGRAGEP-- 215
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207
+++A V+YL SD S ++TG+ + VDG
Sbjct: 216 ------DEIAYAVVYLASDESSFVTGSELVVDGG 243
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 6e-16
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLD-AFVHCYTYEGKMQDPLQVGEDEFK 65
GG+ V + G D+ + E V A + G LD AF + T G+M ++ + ++
Sbjct: 54 GGEAVALAG-DVRD--EAYAKALVALAVERFGGLDIAFNNAGTL-GEMGPVAEMSLEGWR 109
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+ + N + + K M + GGS++F ++ +G G PG AAY A A + L
Sbjct: 110 ETLATNLTSAFLGAKHQIPAMLA-RGGGSLIFTSTFVGHTAGF-PGMAAYAASKAGLIGL 167
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
+ A E G IRVN + G A+ V L R + ++A
Sbjct: 168 TQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKR-MAQPEEIAQA 226
Query: 186 VIYLISDGSRYMTGTTIYVDGAQSITR 212
++L SD + ++TGT + VDG SITR
Sbjct: 227 ALFLASDAASFVTGTALLVDGGVSITR 253
|
Length = 254 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 7e-16
Identities = 56/186 (30%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89
VD + G +D F + EGK G DEF K+V IN ++ L+ V + M+E
Sbjct: 73 VDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVLKVMREQ 132
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149
+ G IV S +G RG+ + Y A + L R +A+E G++ IR+N IA G L
Sbjct: 133 GS-GMIVNTAS-VGGIRGVG-NQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAIL 189
Query: 150 QDEYPIAVGQ------ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 203
++ Q E A + P+ R+ + + ++A+ V +L+SD + Y+ +
Sbjct: 190 TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPE-EVAAVVAFLLSDDAGYVNAAVVP 248
Query: 204 VDGAQS 209
+DG QS
Sbjct: 249 IDGGQS 254
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 7e-16
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
++ E+++ ++ IN W KAV M E GGSI+ +S+ G + L PG A Y A
Sbjct: 111 ELSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGL-KAL-PGLAHYAA 168
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGI------ARGLHLQDEYPIAVGQERAVKLVREAAP 171
+ L +T A E+ ++ IRVN I + + + A + A P
Sbjct: 169 AKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALP 228
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++ + D+A V++L SD SRY+TG + VD
Sbjct: 229 VSGFVPPE-DVADAVLWLASDESRYITGHQLPVDA 262
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 8e-16
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ + + IN + + RM GGSIV L+SI G + PG AYGA A+
Sbjct: 100 AVWDQTMAINLRGTFLCCRHAAPRMIAR-GGGSIVNLSSIAG--QSGDPGYGAYGASKAA 156
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
I L RT A E+ IR N +A GL L + G L L
Sbjct: 157 IRNLTRTLAAELRHAGIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLG 216
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A+ V++L+SD + ++TG + VDG
Sbjct: 217 RPEDVAAAVVFLLSDDASFITGQVLCVDG 245
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 1e-15
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 18/197 (9%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
D V+KA G +D V+ ++ ++++ + + ++ +++A
Sbjct: 61 DPEDIDRLVEKAGDAFGRVDILVN-NAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119
Query: 82 VGRRMKESKAGGSIVFLTSIIGAE--RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
V MKE G IV ++S+ E L A LV+T + E+ +
Sbjct: 120 VLPGMKERGWG-RIVNISSLTVKEPEPNLVLSNVARAGLIG----LVKTLSRELAPDGVT 174
Query: 140 VNGI---------ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 190
VN + R L + E A K V PL R +LA+ + +L
Sbjct: 175 VNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKP-EELAALIAFLA 233
Query: 191 SDGSRYMTGTTIYVDGA 207
S+ + Y+TG I VDG
Sbjct: 234 SEKASYITGQAILVDGG 250
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-15
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 26 FDEAVDKACQILGNLDAFVH----CYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLK 80
+ +D+A + G+ D V+ PL + E++ KK+ +N F ++
Sbjct: 67 VEALIDQAVEKFGSFDVMVNNAGIAPI------TPLLTITEEDLKKVYAVNVFGVLFGIQ 120
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
A R+ K+ GG I+ +SI G + +P AY A ++ L +TAA E+ I V
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQG--FPNLGAYSASKFAVRGLTQTAAQELAPKGITV 178
Query: 141 NG-------------IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
N I + P G + PL R L D+A V
Sbjct: 179 NAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSI----PLGR-LSEPEDVAGLVS 233
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L S+ S Y+TG TI VDG
Sbjct: 234 FLASEDSDYITGQTILVDG 252
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 1e-15
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
L F+K V +N +F+ G+ MKE GGSIV + S+ G G + G Y
Sbjct: 103 LDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGI--YS 159
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRW 175
A++ + + A E IRVN + GL ++ A+ + A+ K PL R
Sbjct: 160 ITKAAVISMTKAFAKECAPFGIRVNALLPGL-TDTKFASALFKNDAILKQALAHIPLRR- 217
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+++A V+YL SD S Y TG + VDG
Sbjct: 218 HAEPSEMAGAVLYLASDASSYTTGECLNVDG 248
|
Length = 252 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 3e-15
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 22/214 (10%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD-PL-QVGE 61
+ V + LD+ E ++ + G +D ++ K+ +
Sbjct: 47 TNLYKNRVIALELDITSKES--IKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPY 104
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGA-----A 113
+++ +++ +N + +A + K+ GSI+ + SI I + +Y
Sbjct: 105 EQWNEVLNVNLGGAFLCSQAFIKLFKKQG-KGSIINIASIYGVIAPDFRIYENTQMYSPV 163
Query: 114 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPL 172
Y A I L + A IRVN I+ G I Q ++ + PL
Sbjct: 164 EYSVIKAGIIHLTKYLAKYYADTGIRVNAISPG-------GILNNQPSEFLEKYTKKCPL 216
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R L+ + DL +I+L+SD S Y+TG + +DG
Sbjct: 217 KRMLNPE-DLRGAIIFLLSDASSYVTGQNLVIDG 249
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 3e-15
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
D + ++ +N KA + S GG IV + + + G PG AY A A
Sbjct: 104 DTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGAGAALKAG--PGMGAYAAAKAG 160
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ +L A E+ I VN + + I RA A RW+ +
Sbjct: 161 VARLTEALAAELLDRGITVNAVLPSI-------IDTPPNRADMP---DADFSRWVTPE-Q 209
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+A+ + +L+SD ++ +TG +I VDG ++
Sbjct: 210 IAAVIAFLLSDEAQAITGASIPVDGGVALP 239
|
Length = 239 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 4e-15
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG---AAAYGAC 118
+ + K++ +N + L +AV +R + G I+ + S+ G G P AY
Sbjct: 111 EAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPPEVMDTIAYNTS 169
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP---IAVGQERAVKLVREAAPLHRW 175
++ R A E G H IRVN IA G +P ER + + PL R
Sbjct: 170 KGAVINFTRALAAEWGPHGIRVNAIAPGF-----FPTKMTRGTLERLGEDLLAHTPLGR- 223
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
L DL + L SD S+++TG + VDG S
Sbjct: 224 LGDDEDLKGAALLLASDASKHITGQILAVDGGVSA 258
|
Length = 259 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 5e-15
Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 36/235 (15%)
Query: 4 SLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVG 60
SL G V D+ E+D A D VDK G LD V+ G D V
Sbjct: 61 SLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK----FGTLDIMVNNAGLTGPPCPDIRNVE 116
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
EF+K+ +N + +K R M K G SIV L S+ A GL G AY
Sbjct: 117 LSEFEKVFDVNVKGVFLGMKHAARIMIPLKKG-SIVSLCSVASAIGGL--GPHAYTGSKH 173
Query: 121 SIHQLVRTAAMEIGKHKIRVN-----GIARGL---HL-QDE--------YPIAVGQERAV 163
++ L R+ A E+GKH IRVN + L HL +DE + G+ +
Sbjct: 174 AVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL 233
Query: 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSY 218
K V E +D+A+ V++L SD +RY++G + +DG + T +R +
Sbjct: 234 KGV-ELTV--------DDVANAVLFLASDEARYISGLNLMIDGGFTCTNHSLRVF 279
|
Length = 280 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 5e-15
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+E+ K++ +N A +L K + ++K G IV ++S+ G +PG Y A+
Sbjct: 105 EEYDKVMNLNLRAVIYLTKLAVPHLIKTK--GEIVNVSSVAGGRS--FPGVLYYCISKAA 160
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA----------- 170
+ Q R A+E+ +RVN ++ G+ I G R + + E
Sbjct: 161 LDQFTRCTALELAPKGVRVNSVSPGV-------IVTGFHRRMGMPEEQYIKFLSRAKETH 213
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
PL R V +++A + +L SD S ++TG + VDG + +
Sbjct: 214 PLGRPGTV-DEVAEAIAFLASDASSFITGQLLPVDGGRHL 252
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 7e-15
Identities = 61/204 (29%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 25 AFDEAVDKAC----QILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVA 74
DE++D + G LD VH + K + D L + F + I+ F A
Sbjct: 66 TNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTA 125
Query: 75 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
L KA M GGSI+ LT +G+ER + P G A++ VR A ++G
Sbjct: 126 ---LAKAARPLMNN---GGSILTLT-YLGSERVV-PNYNVMGVAKAALEASVRYLAADLG 177
Query: 135 KHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
K IRVN I+ G PI + +K APL R + ++ ++ +T
Sbjct: 178 KEGIRVNAISAG-------PIRTLAASGIGDFRKMLKENEANAPLRRNVTIE-EVGNTAA 229
Query: 188 YLISDGSRYMTGTTIYVDGAQSIT 211
+L+SD S +TG IYVD I
Sbjct: 230 FLLSDLSSGITGEIIYVDSGYHIM 253
|
Length = 259 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 8e-15
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E+++ ++ NF A + L + +K S G +IVF++S+ G P A YGA
Sbjct: 105 EEDYSLIMSTNFEAAYHLSRLAHPLLKASGNG-NIVFISSVAGVIA--VPSGAPYGATKG 161
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
+++QL R+ A E K IRVN +A + + Q+ + V E PL R+ + +
Sbjct: 162 ALNQLTRSLACEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPE- 220
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
++A+ V +L + Y+TG I VDG
Sbjct: 221 EVAALVAFLCMPAASYITGQIIAVDG 246
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 8e-15
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 23/191 (12%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+ V + + G LD V+ Y+ + + ++ +K + N + ++L KA +K
Sbjct: 94 DLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLK 153
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
+ G SI+ TS+ A +G P Y A +I R ++++ + IRVN +A G
Sbjct: 154 K---GSSIINTTSVT-AYKG-SPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGP 208
Query: 148 --------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
+E G + V + R P ++A ++L S S Y+TG
Sbjct: 209 IWTPLIPSSFPEEKVSEFGSQ--VPMGRAGQPA--------EVAPAYVFLASQDSSYVTG 258
Query: 200 TTIYVDGAQSI 210
++V+G + I
Sbjct: 259 QVLHVNGGEII 269
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 9e-15
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 13/206 (6%)
Query: 3 GSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGED 62
+L + E E AF + + G LD V+ + L+ +
Sbjct: 311 EALGDEHLSVQADITDEAAVESAFAQIQAR----WGRLDVLVNNAGIAEVFKPSLEQSAE 366
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+F ++ +N + +A R M + GG IV L SI P AY A A++
Sbjct: 367 DFTRVYDVNLSGAFACARAAARLMSQ---GGVIVNLGSIASL--LALPPRNAYCASKAAV 421
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKN 180
L R+ A E IRVN +A G +++ +A+ +R PL R L
Sbjct: 422 TMLSRSLACEWAPAGIRVNTVAPG-YIETPAVLALKASGRADFDSIRRRIPLGR-LGDPE 479
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
++A + +L S + Y+ G T+ VDG
Sbjct: 480 EVAEAIAFLASPAASYVNGATLTVDG 505
|
Length = 520 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 2e-14
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG---SIVFLTSIIGAERGLYPGAAAYGA 117
E + K++ IN + +FL +A+ ++ + ++ + SI G +YGA
Sbjct: 103 ESGWDKVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGSIAGI-VVSGLENYSYGA 161
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
A++HQL R A E+ I VN IA G + A++ ++ PL RW
Sbjct: 162 SKAAVHQLTRKLAKELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRW-G 220
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A I L S Y+TG I VDG
Sbjct: 221 RPEDMAGLAIMLASRAGAYLTGAVIPVDG 249
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 3e-14
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCY-TYEGKMQDPLQVGEDEFKK 66
G+ + D+ +D A + AV G +D V+ TY + D L ++
Sbjct: 51 GERARFIATDITDDA--AIERAVATVVARFGRVDILVNLACTY---LDDGLASSRADWLA 105
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----AERGLYPGAAAYGACAASI 122
+ +N V+ L +A + + GG+IV TSI R LYP A A+I
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLA--RGGGAIVNFTSISAKFAQTGRWLYP------ASKAAI 157
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN-- 180
QL R+ AM++ IRVN ++ G G +RA K R AAP H V +
Sbjct: 158 RQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRA-KADRVAAPFHLLGRVGDPE 216
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
++A V +L SD + ++TG VDG S P
Sbjct: 217 EVAQVVAFLCSDAASFVTGADYAVDGGYSALGP 249
|
Length = 261 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 6e-14
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 6 KGGQPVEV-VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
GGQ + E++ D A+ K LG +D V+ G P + +F
Sbjct: 58 LGGQAFACRCDITSEQELSALADFALSK----LGKVDILVN--NAGGGGPKPFDMPMADF 111
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
++ ++N + + L + V M E GG I+ +TS+ + + +Y + A+
Sbjct: 112 RRAYELNVFSFFHLSQLVAPEM-EKNGGGVILTITSMAAENKNI--NMTSYASSKAAASH 168
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
LVR A ++G+ IRVNGIA G L D + E K+++ P+ R L D+A+
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH-TPIRR-LGQPQDIAN 226
Query: 185 TVIYLISDGSRYMTGTTIYVDG 206
++L S + +++G + V G
Sbjct: 227 AALFLCSPAASWVSGQILTVSG 248
|
Length = 255 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.9 bits (167), Expect = 7e-14
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
EED E ++ V+K G +D V+ G L + ++E+ +++ +N
Sbjct: 67 EEDVENLVEQIVEK----FGKIDILVN---NAGISNFGLVTDMTDEEWDRVIDVNLTGVM 119
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA---AAYGACAASIHQLVRTAAMEI 133
L + M + K G IV ++SI GL GA Y A +++ + A E+
Sbjct: 120 LLTRYALPYMIKRK-SGVIVNISSI----WGLI-GASCEVLYSASKGAVNAFTKALAKEL 173
Query: 134 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKL-------VREAAPLHRWLDVKNDLASTV 186
IRVN +A G A+ E + E PL R + ++A V
Sbjct: 174 APSGIRVNAVAPG---------AIDTEMWSSFSEEDKEGLAEEIPLGRLGKPE-EIAKVV 223
Query: 187 IYLISDGSRYMTGTTIYVDG 206
++L SD + Y+TG I VDG
Sbjct: 224 LFLASDDASYITGQIITVDG 243
|
Length = 247 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 1e-13
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
++F++++ I+ AP+ + KAV M + K G I+ + S++ +E G +AY A
Sbjct: 109 EDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMM-SELG-RETVSAYAAAKGG 165
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVK-----LVREAAPLHRW 175
+ L + A E G+ I+ NGI G + P+ Q + + P RW
Sbjct: 166 LKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARW 225
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D DLA ++L SD S ++ G +YVDG
Sbjct: 226 GD-PEDLAGPAVFLASDASNFVNGHILYVDG 255
|
Length = 265 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 2e-13
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS-- 121
FK +V I+ + + +LKA ++ + G SI+ I A + P CAA
Sbjct: 110 FKTVVDIDLLGTFNVLKAAYPLLR--RPGASIIQ----ISAPQAFVPMPMQAHVCAAKAG 163
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---------VREAAPL 172
+ L RT A+E G IRVN I G PIA G E +L V ++ PL
Sbjct: 164 VDMLTRTLALEWGPEGIRVNSIVPG-------PIA-GTEGMARLAPSPELQAAVAQSVPL 215
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
R K D+A+ ++L SD + Y+TG + VDG S+
Sbjct: 216 KRN-GTKQDIANAALFLASDMASYITGVVLPVDGGWSL 252
|
Length = 264 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 61/205 (29%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAP 75
+E+ F+ ++ G + HC + K + L+ D F L+ N A
Sbjct: 71 DEEITACFETIKEEV----GVIHGVAHCIAFANKEDLRGEFLETSRDGF--LLAQNISA- 123
Query: 76 WFLLKAVGRRMKE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
+ L AV R K+ GGSIV LT +G ER + G AS+ V+ A ++G
Sbjct: 124 -YSLTAVAREAKKLMTEGGSIVTLT-YLGGERVV-QNYNVMGVAKASLEASVKYLANDLG 180
Query: 135 KHKIRVNGIARGLHLQDEYPIAVGQERAV-------KLVREAAPLHRWLDVKNDLASTVI 187
K IRVN I+ G PI + V K + E APL R + ++ T
Sbjct: 181 KDGIRVNAISAG-------PIRTLSAKGVGGFNSILKEIEERAPLRRTTT-QEEVGDTAA 232
Query: 188 YLISDGSRYMTGTTIYVDGAQSITR 212
+L SD SR +TG I+VD I
Sbjct: 233 FLFSDLSRGVTGENIHVDSGYHIIG 257
|
Length = 257 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-13
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 38 GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94
G LD VHC + GK + D + F + ++I+ + L KA M E GGS
Sbjct: 86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGS 142
Query: 95 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154
IV LT +G R + P G A++ VR A E+G IRVN I+ G P
Sbjct: 143 IVTLT-YLGGVRAI-PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAG-------P 193
Query: 155 I------AVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207
I AVG + V E APL R + + ++ +T +L+SD + +TG TIYVD
Sbjct: 194 IRTLASSAVGGILDMIHHVEEKAPLRRTV-TQTEVGNTAAFLLSDLASGITGQTIYVDAG 252
Query: 208 QSI 210
I
Sbjct: 253 YCI 255
|
Length = 258 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-13
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ L++ + VAP L + +RMK + G I+ +TSI G + G A Y A
Sbjct: 110 AAIRALLETDLVAPILLSRLAAQRMKR-QGYGRIIAITSIAG--QVARAGDAVYPAAKQG 166
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ L+R A E G H I N IA G + + + PL RW +
Sbjct: 167 LTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGR-PEE 225
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+A ++L S + Y+ G + VDG S+
Sbjct: 226 IAGAAVFLASPAASYVNGHVLAVDGGYSV 254
|
Length = 256 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 4e-13
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 35 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94
+ G LD FV+ G ++ +++ E + + IN A F + + M E GG
Sbjct: 78 EEFGRLDVFVN-NAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLM-EKVGGGK 135
Query: 95 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154
I+ L+S+ G+ R L G A++ L R A+E+ I VN ++ G D
Sbjct: 136 IISLSSL-GSIRYL-ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALK 193
Query: 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+E ++ R P R ++ + D+A+ V++L S + + G TI VDG +S+
Sbjct: 194 HFPNREELLEDARAKTPAGRMVEPE-DVANAVLFLCSPEADMIRGQTIIVDGGRSL 248
|
Length = 250 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 5e-13
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85
+++A G++D V+ G + +D ++ E ++ ++ +N + +F+ +A +
Sbjct: 74 ALLERAVAEFGHIDILVN---NAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKH 130
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
GG I+ + S++ + G+ +Y A + + + R A E KH I VN IA
Sbjct: 131 FIAQGNGGKIINIASMLSFQGGIR--VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAP 188
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
G + E+ + + P RW + +DL V++L S S Y+ G TI VD
Sbjct: 189 GYMATNNTQQLRADEQRSAEILDRIPAGRW-GLPSDLMGPVVFLASSASDYINGYTIAVD 247
Query: 206 G 206
G
Sbjct: 248 G 248
|
Length = 253 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 6e-13
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 12/190 (6%)
Query: 27 DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
E V + G +D +C + + G + L +D++ + +N + + ++KAV
Sbjct: 58 KEQVAALAKEEGRIDVLFNCAGFVHHGSI---LDCEDDDWDFAMNLNVRSMYLMIKAVLP 114
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+M K GSI+ ++S+ + +G+ P Y A++ L ++ A + + IR N I
Sbjct: 115 KMLARK-DGSIINMSSVASSIKGV-PNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAIC 172
Query: 145 RGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
G L++ E A+K PL R L ++A+ +YL SD S Y+TGT
Sbjct: 173 PGTVDTPSLEERIQAQPDPEEALKAFAARQPLGR-LATPEEVAALAVYLASDESAYVTGT 231
Query: 201 TIYVDGAQSI 210
+ +DG S+
Sbjct: 232 AVVIDGGWSL 241
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 7e-13
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 55 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE---SKAG--GSIVFLTSIIGAERGLY 109
D L + ED F +L+ IN P+FL +AV RRM E G SI+F+TSI +
Sbjct: 96 DLLDLTEDSFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTSI--NAYLVS 153
Query: 110 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169
P Y A + R A + I V+ I GL + + V ++ +
Sbjct: 154 PNRGEYCISKAGLSMATRLLAYRLADEGIAVHEIRPGL-IHTDMTAPVKEKYDELIAAGL 212
Query: 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
P+ RW D+A V L S Y TG I +DG S+ R
Sbjct: 213 VPIRRW-GQPEDIAKAVRTLASGLLPYSTGQPINIDGGLSMRR 254
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 8e-13
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 20 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
EDRE V A + G +D V + L E+ + K++ +N A +
Sbjct: 72 EDRE----RLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMT 127
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
KAV M E + GGS+V ++S+ +PG Y ++ L + A E+ IR
Sbjct: 128 KAVVPEM-EKRGGGSVVIVSSVAAFHP--FPGLGPYNVSKTALLGLTKNLAPELAPRNIR 184
Query: 140 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
VN +A GL ++ + A+ ++AV+ + R L D A V +L S+ + Y+TG
Sbjct: 185 VNCLAPGL-IKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASYITG 243
Query: 200 TTIYVDG 206
T+ V G
Sbjct: 244 ETVVVGG 250
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.7 bits (158), Expect = 1e-12
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+E+ ++ +N + + +A M ++ GG IV + S+ G G Y A A
Sbjct: 108 IEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG--NRGQVNYAASKA 165
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---VREAAPLHRWLD 177
+ L +T A E+ I VN +A G I + P+ R +
Sbjct: 166 GLIGLTKTLANELAPRGITVNAVAPGA-------INTPMADNAAPTEHLLNPVPVQRLGE 218
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+++A+ V +L+SD + Y+TG I VDG
Sbjct: 219 -PDEVAALVAFLVSDAASYVTGQVIPVDG 246
|
Length = 249 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 1e-12
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
R+ V++ G LD + E + + E EF ++ +N W +K
Sbjct: 67 RDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKY 126
Query: 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141
M ++ GG+IV S+ G G P + Y A ++ L ++AA+E K IRVN
Sbjct: 127 QIPLML-AQGGGAIVNTASVAGL--GAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183
Query: 142 GIARGLHLQDEYPIAVGQERAVKLVREAA-PLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
+ + D + A + A P+ R V+ ++AS V+YL SDG+ + TG
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVE-EVASAVLYLCSDGASFTTGH 242
Query: 201 TIYVDG 206
+ VDG
Sbjct: 243 ALMVDG 248
|
Length = 253 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 70
V+V ++++ + A E ++K + LG V+ Y D + +E K +
Sbjct: 68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNN-DFSNLTAEELDKHYMV 126
Query: 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 130
N A LL + R + K+GG I+ +TS G +G G AY A +I L + A
Sbjct: 127 NVRAT-TLLSSQFARGFDKKSGGRIINMTS--GQFQGPMVGELAYAATKGAIDALTSSLA 183
Query: 131 MEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIY 188
E+ I VN I G P G E + + P R + D A + +
Sbjct: 184 AEVAHLGITVNAINPG-------PTDTGWMTEEIKQGLLPMFPFGR-IGEPKDAARLIKF 235
Query: 189 LISDGSRYMTGTTIYVDG 206
L S+ + ++TG I+ +G
Sbjct: 236 LASEEAEWITGQIIHSEG 253
|
Length = 256 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDE 63
G V+ L + +E + + A G LD V+ +Q P++ ++
Sbjct: 46 GDAGGSVIYLPADVTKEDEIADMIAAAAAEFGGLDILVN----NAGIQHVAPIEEFPPED 101
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ +++ + + + ++A MK+ + G I+ + S G P +AY A +
Sbjct: 102 WDRIIAVMLTSAFHTIRAALPHMKK-QGWGRIINIASAHGLVA--SPFKSAYVAAKHGLI 158
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-----------ERAV--KLVREAA 170
L + A+E+ +H I VN I G P+ Q E V +++ +
Sbjct: 159 GLTKVLALEVAEHGITVNAICPGYVRT---PLVEKQIADQAKTRGIPEEQVIREVMLKGQ 215
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P R++ V ++A T +YL SD + +TG I +DG
Sbjct: 216 PTKRFVTVD-EVAETALYLASDAAAQITGQAIVLDG 250
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 25 AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
AV + LG L V+ ++ E++++ ++ IN + +A R
Sbjct: 72 DLRAAVARTEAELGALTLAVNAAGIANA-NPAEEMEEEQWQTVMDINLTGVFLSCQAEAR 130
Query: 85 RMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
M E+ GGSIV + S+ G RGL A Y A A + L ++ AME IRVN
Sbjct: 131 AMLEN-GGGSIVNIASMSGIIVNRGLL--QAHYNASKAGVIHLSKSLAMEWVGRGIRVNS 187
Query: 143 IARGLHL--QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
I+ G + P V Q KL E P+ R V +++ ++L+SD + + TG
Sbjct: 188 ISPGYTATPMNTRPEMVHQ---TKLFEEQTPMQRMAKV-DEMVGPAVFLLSDAASFCTGV 243
Query: 201 TIYVDG 206
+ VDG
Sbjct: 244 DLLVDG 249
|
Length = 254 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 2e-12
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDEF 64
+ +G+ M+ E A + +D A + G +D V+ +Q P++ +++
Sbjct: 50 KAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVN----NAGIQHVAPIEDFPTEKW 105
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
KK++ I + KA MK GG I+ + S+ G G AAY + +
Sbjct: 106 KKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVG--SAGKAAYVSAKHGLIG 162
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ------------ERAVK-LVREAAP 171
L + A+E H + VN I G P+ Q E ++ ++ P
Sbjct: 163 LTKVVALEGATHGVTVNAICPGYVDT---PLVRKQIPDLAKERGISEEEVLEDVLLPLVP 219
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R+ V+ ++A ++L S ++ +TG VDG
Sbjct: 220 QKRFTTVE-EIADYALFLASFAAKGVTGQAWVVDG 253
|
Length = 258 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFL-TSIIGAERGLYPGAAAY 115
+++ E E+ ++ +N + +F +K GR + + G IV L TS++GA Y +AY
Sbjct: 106 VEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGAFTPFY---SAY 159
Query: 116 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVREAAPLH 173
A + R A+ E G I V + G + P QE AV + AA L
Sbjct: 160 AGSKAPVEHFTRAASKEFGARGISVTAVGPG---PMDTPFFYPQEGAEAVAYHKTAAALS 216
Query: 174 RWLDVK----NDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+ + +L++DG ++TG TI ++G
Sbjct: 217 PFSKTGLTDIEDIVPFIRFLVTDG-WWITGQTILING 252
|
Length = 257 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 2e-12
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E ++ ++++N + K M+ GGSIV S + G G AAY A
Sbjct: 102 EADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG--RGRAAYVASKG 158
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWL 176
+I L R A++ IRVN +A G + + + E + +R P++R+
Sbjct: 159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRF- 217
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
++A ++L SD S + TGTT+ VDG
Sbjct: 218 GTAEEVAQAALFLASDESSFATGTTLVVDGGWLA 251
|
Length = 252 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 3e-12
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 10/183 (5%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQ-DPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
D G +D V+ G M+ D L V D +KK + +N +AV + M
Sbjct: 74 ADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA 133
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
+ + GG+IV +S + + YG ++ L + A E+G IRVN IA G
Sbjct: 134 K-RGGGAIVNQSST-----AAWLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGP 187
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207
+ E V + V + + PL R + DL ++L+SD + ++TG VDG
Sbjct: 188 -IDTEATRTVTPKEFVADMVKGIPLSR-MGTPEDLVGMCLFLLSDEASWITGQIFNVDGG 245
Query: 208 QSI 210
Q I
Sbjct: 246 QII 248
|
Length = 250 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 3e-12
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
E F + N P+FL++A+ + SIV SI A G+ P ++ Y A
Sbjct: 98 DWDEAMFDRSFNTNVKGPYFLIQAL---LPLLANPASIVLNGSI-NAHIGM-PNSSVYAA 152
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARG---------LHLQDEYPIAVGQERAVKLVRE 168
A++ L +T + E+ IRVN ++ G L L + + ++
Sbjct: 153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEAT-----LDAVAAQIQA 207
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209
PL R+ ++A V+YL SD S ++ G+ I VDG S
Sbjct: 208 LVPLGRFGTP-EEIAKAVLYLASDESAFIVGSEIIVDGGMS 247
|
Length = 249 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 3e-12
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
+ E ++ L N AP+FL +A +++ K G+IV +T I AER L G Y A
Sbjct: 103 SITEAQWDDLFASNLKAPFFLSQAAAPQLR--KQRGAIVNITDI-HAERPL-KGYPVYCA 158
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHL---QDEYPIAVGQERAVKLVREAAPLHR 174
A++ L R+ A+E+ +RVN +A G L ++ + PL R
Sbjct: 159 AKAALEMLTRSLALELAPE-VRVNAVAPGAILWPEDGNSFDEEARQAILART----PLKR 213
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+ D+A V +L++D S ++TG + VDG +S+T
Sbjct: 214 IGTPE-DIAEAVRFLLADAS-FITGQILAVDGGRSLTL 249
|
Length = 249 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 6e-12
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 17/202 (8%)
Query: 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 75
+ ++ + + D V G++D V+ + + + + + +L IN
Sbjct: 54 ISLDVTDQASIDRCVAALVDRWGSIDILVNNAAL-FDLAPIVDITRESYDRLFAINVSGT 112
Query: 76 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 135
F+++AV R M GG I+ + S G RG Y A A++ L ++A + + +
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAG-RRG-EALVGVYCATKAAVISLTQSAGLNLIR 170
Query: 136 HKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
H I VN IA G+ G+++ +LV EA P R + DL
Sbjct: 171 HGINVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKK--RLVGEAVPFGR-MGRAEDLTG 227
Query: 185 TVIYLISDGSRYMTGTTIYVDG 206
I+L S + Y+ T VDG
Sbjct: 228 MAIFLASTDADYIVAQTYNVDG 249
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 8e-12
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 6 KGGQPVEVVGLDME--EDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G V D+ ED A + G LDA V+ T G + L
Sbjct: 53 ALGAKAVFVQADLSDVEDCRRVVAAADEA----FGRLDALVNAAGLTDRGTI---LDTSP 105
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ F + +N AP+FL++ + M+ KA G+IV + S+ + G P AAY A +
Sbjct: 106 ELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM--SAHGGQPFLAAYCASKGA 163
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK----------LVREAA- 170
+ L R AA + +++IRVNG+ G +A E ++ L + AA
Sbjct: 164 LATLTRNAAYALLRNRIRVNGLNIGW-------MATEGEDRIQREFHGAPDDWLEKAAAT 216
Query: 171 -PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
P R LD +++A V +L+SD S MTG+ I D QS+
Sbjct: 217 QPFGRLLDP-DEVARAVAFLLSDESGLMTGSVIDFD--QSV 254
|
Length = 260 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 9e-12
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFK 65
G+ + D+ + A VD A + G++D V+ G + D + E ++
Sbjct: 51 GRRFLSLTADLSD--IEAIKALVDSAVEEFGHIDILVN---NAGIIRRADAEEFSEKDWD 105
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
++ +N + +FL +A + + GG I+ + S++ + G+ +Y A ++ L
Sbjct: 106 DVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--VPSYTASKHAVAGL 163
Query: 126 VRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
+ A E I VN IA G + + + ++R + E P RW +D+
Sbjct: 164 TKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRN-AAILERIPAGRW-GTPDDIGG 221
Query: 185 TVIYLISDGSRYMTGTTIYVDG 206
++L S S Y+ G T+ VDG
Sbjct: 222 PAVFLASSASDYVNGYTLAVDG 243
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 2e-11
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 26/198 (13%)
Query: 16 LDMEEDREGAFDEA--VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 73
LD+ +D E FD VD C G LD + + L +E++ + N
Sbjct: 52 LDLSDDLEPLFDWVPSVDILCNTAGILDDY----------KPLLDTSLEEWQHIFDTNLT 101
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
+ + L +A +M E K G I+ + SI G G AAY A ++ + A++
Sbjct: 102 STFLLTRAYLPQMLERK-SGIIINMCSIASFVAG--GGGAAYTASKHALAGFTKQLALDY 158
Query: 134 GKHKIRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
K I+V GIA G + D P + V P+ RW + + ++A ++
Sbjct: 159 AKDGIQVFGIAPGAVKTPMTAADFEPGGLADW-----VARETPIKRWAEPE-EVAELTLF 212
Query: 189 LISDGSRYMTGTTIYVDG 206
L S + YM GT + +DG
Sbjct: 213 LASGKADYMQGTIVPIDG 230
|
Length = 235 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 3e-11
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 34/204 (16%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
+ + AV G +D V+ + V E+++ K + IN + + +A
Sbjct: 72 DSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVSEEDWDKTIDINLKGSFLMAQA 130
Query: 82 VGRRMKESKAGGSIVFLTS---IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
VGR M GG IV L S ++ ER AY A A + + + A+E G + I
Sbjct: 131 VGRHMIA-AGGGKIVNLASQAGVVALER-----HVAYCASKAGVVGMTKVLALEWGPYGI 184
Query: 139 RVNGIARGLHLQDEYPIAVGQ--------ERAVKLV---REAAPLHRWLDVKNDLASTVI 187
VN I+ + L +G+ ERA KL+ R A P ++A+ +
Sbjct: 185 TVNAISPTVVLT-----ELGKKAWAGEKGERAKKLIPAGRFAYP--------EEIAAAAL 231
Query: 188 YLISDGSRYMTGTTIYVDGAQSIT 211
+L SD + +TG + +DG +I
Sbjct: 232 FLASDAAAMITGENLVIDGGYTIQ 255
|
Length = 255 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 6e-11
Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 34/216 (15%)
Query: 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKL 67
+G+ + E A ++A G LD V + G + +++ +
Sbjct: 48 GPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVV---SNAGIATSSPIAETSLEDWNRS 104
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPG--AAAYGACAASIHQL 125
+ IN + + + R MK GG+IVF ++ + PG AAAY A A+ L
Sbjct: 105 MDINLTGHFLVSREAFRIMKSQGIGGNIVF----NASKNAVAPGPNAAAYSAAKAAEAHL 160
Query: 126 VRTAAMEIGKHKIRVN-----GIARGLHLQDE-----YPIAVGQ-ERAVK----LVREAA 170
R A+E G+ IRVN + RG + + A G E + L RE
Sbjct: 161 ARCLALEGGEDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVL 220
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P D+A V+ + S+ TG + VDG
Sbjct: 221 P--------EDVAEAVVAMASEDFGKTTGAIVTVDG 248
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 7e-11
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQ--ILGNLDAFVHCYTYEGKMQDPL-QVG 60
K G+ V V +D+ E E EA+++ + IL N + + PL +
Sbjct: 60 KEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIR--------RAPLLEYK 111
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++ ++ IN + + L +AV + M + +G I+ + S++ + G + AY A
Sbjct: 112 DEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG-KIINIASMLSFQGGKF--VPAYTASKH 168
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 179
+ L + A E+ + I+VN IA G + + PI + R +++ + P RW +
Sbjct: 169 GVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL-KRIPAGRWGEP- 226
Query: 180 NDLASTVIYLISDGSRYMTGTTIYVDGA 207
+DL ++L S S Y+ G + VDG
Sbjct: 227 DDLMGAAVFLASRASDYVNGHILAVDGG 254
|
Length = 258 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 8e-11
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
+ + V+ A G LD V+ + + L+V E+EF ++ +N + + +A
Sbjct: 62 KRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQA 121
Query: 82 VGRRMKESKAGGSIVFLTSIIGAE-RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
+ M+E + GG I+ + S G R PG Y A + + A+E+ IRV
Sbjct: 122 LVPHMEE-QGGGVIINIASTAGLRPR---PGLTWYNASKGWVVTATKAMAVELAPRNIRV 177
Query: 141 NGI---ARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM 197
N + A L + E K R PL R D+A+ +YL SD + ++
Sbjct: 178 NCLCPVAGETPLLSMFMGEDTPENRAKF-RATIPLGRLSTPD-DIANAALYLASDEASFI 235
Query: 198 TGTTIYVDGAQSI 210
TG + VDG + I
Sbjct: 236 TGVALEVDGGRCI 248
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 1e-10
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
+RM++ GGSI+ L+S A +G A++ +V+ AA E+G+ IRVN +
Sbjct: 137 KRMEKV-GGGSIISLSST--GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAV 193
Query: 144 ARGLHLQDEYPIAVGQERA------VK-LVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
+ G PI +A VK E +PL+R + DLA ++L S+ + +
Sbjct: 194 SGG-------PIDTDALKAFTNYEEVKAKTEELSPLNR-MGQPEDLAGACLFLCSEKASW 245
Query: 197 MTGTTIYVDG 206
+TG TI VDG
Sbjct: 246 LTGQTIVVDG 255
|
Length = 260 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-10
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL---VKINFVAPWFL 78
E A ++KA ++L +D V T G ++D + +EF L + + P +
Sbjct: 65 TESA-RNVIEKAAKVLNAIDGLV--VTVGGYVEDTV----EEFSGLEEMLTNHIKIPLYA 117
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+ A R +KE G SIV ++S+ G + P +Y A + + V A E+ I
Sbjct: 118 VNASLRFLKE---GSSIVLVSSMSGIYKA-SPDQLSYAVAKAGLAKAVEILASELLGRGI 173
Query: 139 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
RVNGIA D P ++ KL + AP D A +I+L++D + ++
Sbjct: 174 RVNGIAPTTISGDFEP-ERNWKKLRKLGDDMAP-------PEDFAKVIIWLLTDEADWVD 225
Query: 199 GTTIYVDG 206
G I VDG
Sbjct: 226 GVVIPVDG 233
|
Length = 238 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 2e-10
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89
+D+ LG +D V C + L + +EF++L N + +A + M +
Sbjct: 77 LDQVTAELGGIDIAV-CNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ 135
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149
GG I+ S+ G + + Y A A++ L + A+E+ HKIRVN ++ G ++
Sbjct: 136 GQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPG-YI 194
Query: 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209
E + + L PL R L +LA +YL S+ S YMTG+ I +DG +
Sbjct: 195 LTELVEPYTEYQP--LWEPKIPLGR-LGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT 251
|
Length = 253 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-10
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 35/201 (17%)
Query: 25 AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE------DEFKKLVKINFVAPWFL 78
A DE V + + G +D V+ L++G ++++ +N + +
Sbjct: 61 AVDEVVQRLEREYGPIDVLVNVAGI-------LRLGAIDSLSDEDWQATFAVNTFGVFNV 113
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+AV RMK ++G +IV + S A G AAY A A++ L + +E+ + I
Sbjct: 114 SQAVSPRMKRRRSG-AIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGI 170
Query: 139 RVNGIA---------RGLHLQDEYPIAVGQERAVK----LVREAAPLHRWLDVKNDLAST 185
R N ++ R L DEY G+++ + R PL + + +D+A+
Sbjct: 171 RCNVVSPGSTDTEMQRQL-WNDEY----GEQQVIAGSPEQFRLGIPLGK-IAEPSDIANA 224
Query: 186 VIYLISDGSRYMTGTTIYVDG 206
V++L SD + ++T + VDG
Sbjct: 225 VLFLASDLASHITMHDLVVDG 245
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 6e-10
Identities = 44/142 (30%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
R+M+E GG+IVF+ S G A+AY A A+ L R A E G + IRVN +
Sbjct: 537 RQMREQGLGGNIVFIASKNAVYAG--KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTV 594
Query: 144 ARGLHLQDE--YPIAVGQERAVKLVREAAPLHRWLDVKN---------DLASTVIYLISD 192
LQ + +ERA A L + D+A V +L S
Sbjct: 595 NPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASS 654
Query: 193 GSRYMTGTTIYVDG--AQSITR 212
S TG I VDG + R
Sbjct: 655 KSEKTTGCIITVDGGVPAAFLR 676
|
Length = 676 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 7e-10
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 76 WFLLKAVGRRMKESKAGGSIVFL--TSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
++ +AVG+ E G+I+ + T A G+ AAA A + + RT A+E
Sbjct: 114 FYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA----KAGVLAMTRTLAVEW 169
Query: 134 G-KHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPLHRWLDVKNDLAS 184
G K+ IRVN IA G PI E A K ++ PL R L ++A
Sbjct: 170 GRKYGIRVNAIAPG-------PIERTGGADKLWESEEAAKRTIQSVPLGR-LGTPEEIAG 221
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQ 208
+L+SD + Y+ GT I +DG Q
Sbjct: 222 LAYFLLSDEAAYINGTCITMDGGQ 245
|
Length = 252 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 8e-10
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 26/202 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC-------YTYEGKMQDPLQVGEDEFKKLVKIN 71
E+D + A A K G LD V+C TY K Q P + F++++ +N
Sbjct: 59 EKDVKAALALAKAK----FGRLDIVVNCAGIAVAAKTYNKKGQQP--HSLELFQRVINVN 112
Query: 72 FVAPWFLLKAVGRRM--KESKAGGS--IVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
+ + +++ M E GG ++ T+ + A G G AAY A I +
Sbjct: 113 LIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEG-QIGQAAYSASKGGIVGMTL 171
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK--LVREAAPLHRWLDVKNDLAST 185
A ++ IRV IA GL + P+ G V+ L ++ R L + A
Sbjct: 172 PIARDLAPQGIRVVTIAPGLF---DTPLLAGLPEKVRDFLAKQVPFPSR-LGDPAEYAHL 227
Query: 186 VIYLISDGSRYMTGTTIYVDGA 207
V ++I + Y+ G I +DGA
Sbjct: 228 VQHIIEN--PYLNGEVIRLDGA 247
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 8e-10
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 55 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA 114
D L++ D+ +L KIN AP+ R+M E GG I+ + S+ G +R G AA
Sbjct: 90 DALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNG-DRMPVAGMAA 145
Query: 115 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 174
Y A +++ + R A + G I +N + G D P A G + + +H
Sbjct: 146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP-ANGPMKDM--------MHS 196
Query: 175 WLDVK-----NDLASTVIYLISDGSRYMTGTTIYVDGA 207
++ +K ++A V +L + ++TG +DGA
Sbjct: 197 FMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234
|
Length = 237 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 8e-10
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 60/235 (25%)
Query: 11 VEVVGLDMEEDREG-----------AFDEAVDKACQIL----GNLDAFVHCYTYEG--KM 53
+V+G D + + AV + CQ L G LD V+ G +M
Sbjct: 33 AKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNA---AGILRM 89
Query: 54 QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--G 111
+ ++++++ +N + L +AV + + + G+IV +G+ P G
Sbjct: 90 GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIV----TVGSNAAHVPRIG 144
Query: 112 AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERA 162
AAYGA A++ L + +E+ + +R N ++ R L DE G+++
Sbjct: 145 MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTL-WVDED----GEQQV 199
Query: 163 VK-----------LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ L + A P ++A+ V++L SD + ++T I VDG
Sbjct: 200 IAGFPEQFKLGIPLGKIARP--------QEIANAVLFLASDLASHITLQDIVVDG 246
|
Length = 252 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 9e-10
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCY-TYEGKMQDPLQVGEDE 63
L+ G P+ + LD+ + A E + G +DA V+C DPL ++
Sbjct: 36 LEYGDPLRLTPLDVADAA--AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLST--ED 91
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+++ +N + LL+AV MK+ + G+IV + S A AAYGA A++
Sbjct: 92 WEQTFAVNVTGVFNLLQAVAPHMKDRR-TGAIVTVAS--NAAHVPRISMAAYGASKAALA 148
Query: 124 QLVRTAAMEIGKHKIRVNGIARG--------LHLQDEYPIAVGQERAVKLVREA----AP 171
L + +E+ + +R N ++ G DE G + + V E P
Sbjct: 149 SLSKCLGLELAPYGVRCNVVSPGSTDTAMQRTLWHDED----GAAQVIAGVPEQFRLGIP 204
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L + + D+A+ V++L SD + ++T + VDG
Sbjct: 205 LGK-IAQPADIANAVLFLASDQAGHITMHDLVVDG 238
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-09
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGED 62
G E + +D+ + A + + LG+ + Y+ +++ ++ +
Sbjct: 63 ESYGVRCEHMEIDLSQPY--APNRVFYAVSERLGDPSILINNAAYSTHTRLE---ELTAE 117
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+ K +N A L A ++ + KAGG I+ LTS G G P AY A +I
Sbjct: 118 QLDKHYAVNVRATMLLSSAFAKQY-DGKAGGRIINLTS--GQSLGPMPDELAYAATKGAI 174
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKN 180
++ A E+ + I VN + G P G E + P R +
Sbjct: 175 EAFTKSLAPELAEKGITVNAVNPG-------PTDTGWITEELKHHLVPKFPQGRVGEPV- 226
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDGA 207
D A + +L+S+ ++++TG I+ +G
Sbjct: 227 DAARLIAFLVSEEAKWITGQVIHSEGG 253
|
Length = 256 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 1e-09
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86
D AV A Q LG +D V+ ++ K + +++L+ IN + AV M
Sbjct: 68 DTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGM 126
Query: 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146
E AG IV + S A R G A Y AC + +T A E +H I VN + G
Sbjct: 127 VERGAG-RIVNIAS--DAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPG 183
Query: 147 ---LHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
L D+ E+ + A PL R L +DL +++ SD + ++TG +
Sbjct: 184 PTDTALLDDICGGAENPEKLREAFTRAIPLGR-LGQPDDLPGAILFFSSDDASFITGQVL 242
Query: 203 YVDG 206
V G
Sbjct: 243 SVSG 246
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 2e-09
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
A+ +A + G +D V ++ L + +++ + IN W + KAV M
Sbjct: 71 AAIKRAKEKEGRIDILV-NNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMI 129
Query: 88 ESKAGGSIVFLTSIIG---AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
K G IV ++S+ G A+ PG AY A+I L ++ A+E + IRVN I
Sbjct: 130 ARK-DGRIVMMSSVTGDMVAD----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAIC 184
Query: 145 RGLHLQDEYPIAVG---------QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 195
G P+A E + + +A PL R L ++ +L SD S
Sbjct: 185 PGYVRT---PMAESIARQSNPEDPESVLTEMAKAIPLRR-LADPLEVGELAAFLASDESS 240
Query: 196 YMTGTTIYVDGAQSI 210
Y+TGT +DG ++
Sbjct: 241 YLTGTQNVIDGGSTL 255
|
Length = 263 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 2e-09
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149
GGS+ S GAE+ + G A++ VR A E+G IRV+ I+ G
Sbjct: 139 TNGGSL-LTMSYYGAEK-VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPG--- 193
Query: 150 QDEYPI----AVGQERAVKLVREA---APLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
P+ A G + L+ +A APL R +D+ +D+ + +L SD +R +TG T+
Sbjct: 194 ----PLKTRAASGIDDFDALLEDAAERAPLRRLVDI-DDVGAVAAFLASDAARRLTGNTL 248
Query: 203 YVDGAQSI 210
Y+DG I
Sbjct: 249 YIDGGYHI 256
|
Length = 258 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 2e-09
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
E VD Q G +D V M E + ++ + + P+ LL+A +MK
Sbjct: 61 ELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMK 120
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG- 146
++ GGSI+F+TS + + + YG A+ L + A E+ + I V I
Sbjct: 121 KAG-GGSIIFITSAVP--KKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNF 177
Query: 147 LHLQDEYPIAVGQE--RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204
+ +P + + + V+ PL R L +++ + V +L S + +TG
Sbjct: 178 FNSPTYFPTSDWENNPELRERVKRDVPLGR-LGRPDEMGALVAFLASRRADPITGQFFAF 236
Query: 205 DG 206
G
Sbjct: 237 AG 238
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 3e-09
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 12/184 (6%)
Query: 25 AFDEAVDKACQILGNLDAFVHCYTYEGKMQ-DPLQVGEDE-FKKLVKINFVAPWFLLKAV 82
A D A G +D V+ G M + + E F + + N + +L+
Sbjct: 69 AVTRLFDAAETAFGRIDVLVNN---AGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREA 125
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
R + + GG I+ L++ PG Y A A++ LV A E+ I VN
Sbjct: 126 ARHLGQ---GGRIINLST--SVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNA 180
Query: 143 IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
+A G + + E+ +L APL R L ++A+ V +L ++ G +
Sbjct: 181 VAPGPVATELFFNGKSAEQIDQLAG-LAPLER-LGTPEEIAAAVAFLAGPDGAWVNGQVL 238
Query: 203 YVDG 206
V+G
Sbjct: 239 RVNG 242
|
Length = 245 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 52/154 (33%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA-----Y 115
E+++ K++KIN + +K SK G+IV + S G G AA Y
Sbjct: 100 EEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGI------GTAAEGTTFY 152
Query: 116 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL---VREAAPL 172
A I L R A E+GK+ IRVN +A G D QE A KL R L
Sbjct: 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL 212
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A+ V++L SD +RY+TG I DG
Sbjct: 213 KT-TGKPEDIANIVLFLASDDARYITGQVIVADG 245
|
Length = 255 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 4e-09
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 18/190 (9%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVGEDEF 64
G + LD+ DR A + A++ + G +D V+ G + D++
Sbjct: 51 GAGAALALALDVT-DRA-AVEAAIEALPEEFGRIDILVN---NAGLALGDPLDEADLDDW 105
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+++ N +AV M E K G I+ L SI G YPG A YGA A++
Sbjct: 106 DRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRY--PYPGGAVYGATKAAVRA 162
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEY---PIAVGQERAVKLVREAAPLHRWLDVKND 181
E+ IRV I+ GL E+ ERA K+ + L D
Sbjct: 163 FSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALT-----PED 217
Query: 182 LASTVIYLIS 191
+A V++ +
Sbjct: 218 IAEAVLFAAT 227
|
Length = 246 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-09
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 7 GGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-----KMQDPLQV 59
G VE V D+ E + D AV++ LG LD V+ G M D
Sbjct: 67 GLGRVEAVVCDVTSEAQVDALIDAAVER----LGRLDVLVNNAGLGGQTPVVDMTD---- 118
Query: 60 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGA 117
DE+ +++ + + +A R M+ GG IV S++G A+ G A Y A
Sbjct: 119 --DEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG----QAHYAA 172
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV------REAAP 171
A + L R +A+E ++ +R+N +A + + E +L R A P
Sbjct: 173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEP 232
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204
W ++A+ + +L SD S Y+TG + V
Sbjct: 233 ---W-----EVANVIAFLASDYSSYLTGEVVSV 257
|
Length = 262 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 5e-09
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 55 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-----GSIVFLTSI----IGAE 105
D L + + F +++ IN P+FL +AV +RM SIVF++S+ +
Sbjct: 97 DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN 156
Query: 106 RGLYPGAAAYGACA--ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163
RG Y C A + + A + + I V + GL ++ + V +
Sbjct: 157 RGEY--------CISKAGLSMAAQLFAARLAEEGIGVYEVRPGL-IKTDMTAPV-TAKYD 206
Query: 164 KLVREA-APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
L+ + P+ RW D+A V L S Y TG I+VDG SI R
Sbjct: 207 ALIAKGLVPMPRW-GEPEDVARAVAALASGDLPYSTGQAIHVDGGLSIPR 255
|
Length = 256 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 54.4 bits (131), Expect = 6e-09
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149
+ GGSI+ +S G LY + Y A ++ ++ A+E G+ IR N IA G
Sbjct: 131 EQGGSIINTSSFSGQAADLY--RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPG--- 185
Query: 150 QDEYPI-----AVGQERAVKLVREA----APLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
E P+ ++ A K RE PL R L ++A V++L SD S ++TG
Sbjct: 186 TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGR-LGKPEEVAKLVVFLASDDSSFITGE 244
Query: 201 TIYVDG 206
TI +DG
Sbjct: 245 TIRIDG 250
|
Length = 272 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 6e-09
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+AV++ + LG LD V+ ++ Q + ++ K K N + + + KA +K
Sbjct: 113 DAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK 172
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAA---YGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+ G +I+ SI G Y G Y A +IH R+ A + + IRVN +A
Sbjct: 173 Q---GSAIINTGSITG-----YEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVA 224
Query: 145 RGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
G PI + E V P+ R +LA ++L S S Y+T
Sbjct: 225 PG-------PIWTPLIPSDFDEEKVSQFGSNTPMQRPGQ-PEELAPAYVFLASPDSSYIT 276
Query: 199 GTTIYVDGAQSIT 211
G ++V+G +
Sbjct: 277 GQMLHVNGGVIVN 289
|
Length = 290 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 9e-09
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 7 GGQPVEVVG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---D 62
GG+ + V G + +E D AV + G LD ++ +++ + E +
Sbjct: 56 GGEAIAVKGDVTVESDVVNLIQTAVKE----FGTLDVMIN----NAGIENAVPSHEMSLE 107
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
++ K++ N + + + E G+I+ ++S+ E+ +P Y A +
Sbjct: 108 DWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV--HEQIPWPLFVHYAASKGGV 165
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLD 177
+ T AME IRVN I G PI A ++RA V P+ +
Sbjct: 166 KLMTETLAMEYAPKGIRVNNIGPG---AINTPINAEKFADPKQRAD--VESMIPMGY-IG 219
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A+ +L S + Y+TG T++ DG
Sbjct: 220 KPEEIAAVAAWLASSEASYVTGITLFADG 248
|
Length = 261 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 1e-08
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89
V A + G +DA V+ M+ ++ ++++N + L +A + ES
Sbjct: 73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES 132
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL-- 147
GGSIV + S+ R P AY ++ ++ A E+G IRVN +A G
Sbjct: 133 --GGSIVMINSM--VLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIW 188
Query: 148 ---------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
H +Y + V Q A + L R L +++AS V++L SD +R +T
Sbjct: 189 GDPLKGYFRHQAGKYGVTVEQIYAE--TAANSDLKR-LPTDDEVASAVLFLASDLARAIT 245
Query: 199 GTTIYVDG 206
G T+ V+
Sbjct: 246 GQTLDVNC 253
|
Length = 258 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 48/206 (23%)
Query: 30 VDKACQILGNLDAFVH---------CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80
V +A ++LG +DA V C +E D L+ ++ VAP +L
Sbjct: 67 VKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAA--------LLHLVAPGYLTT 118
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
+ + E K G +V+L+S+ E P A + QL + + G IR
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVSVKEP--MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRA 176
Query: 141 NGI---------ARGLHLQDEYPIAVGQERAV-------KLVREAAPLHR---WLDVKND 181
+ AR E + +ER V + V E PL R W +
Sbjct: 177 YTVLLGSFDTPGAR------ENLARIAEERGVSFEETWEREVLERTPLKRTGRW----EE 226
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGA 207
L S + +L+S+ + YM G+TI DGA
Sbjct: 227 LGSLIAFLLSENAEYMLGSTIVFDGA 252
|
Length = 259 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 1e-08
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQ-VGEDE 63
GQ + L + A A+D +G +D V+ MQ PL+ D
Sbjct: 55 KGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVN----NAGMQFRTPLEDFPADA 110
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-ERGLYPGAAAYGACAASI 122
F++L++ N + +++ +AV R M ++ G I+ + S+ A R PG A Y A ++
Sbjct: 111 FERLLRTNISSVFYVGQAVARHMI-ARGAGKIINIASVQSALAR---PGIAPYTATKGAV 166
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 182
L + A + KH ++ N IA G V + + P RW V+ +L
Sbjct: 167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVE-EL 225
Query: 183 ASTVIYLISDGSRYMTGTTIYVDG 206
++L SD S ++ G +YVDG
Sbjct: 226 VGACVFLASDASSFVNGHVLYVDG 249
|
Length = 255 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 44/210 (20%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 28 EAVDKACQIL----GNLDAFVHC-------------YTYEGKMQDPLQVGEDEFKKLVKI 70
++++A + + G +D ++ + Q+ + E+ ++ + +
Sbjct: 67 ASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFDL 126
Query: 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRT 128
N + + G+ M E K GGSI+ ++S+ P AY A A++ +
Sbjct: 127 NLNGSFLPSQVFGKDMLEQK-GGSIINISSM----NAFSPLTKVPAYSAAKAAVSNFTQW 181
Query: 129 AAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
A+E +RVN IA G L D +R+ K++ P+ R+
Sbjct: 182 LAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSY----TDRSNKILGR-TPMGRFGKP 236
Query: 179 KNDLASTVIYLISDG-SRYMTGTTIYVDGA 207
+ +L +++L S+ S ++TG I VDG
Sbjct: 237 E-ELLGALLFLASEKASSFVTGVVIPVDGG 265
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 2e-08
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
EDE++ + + N + + L + +K+ + +IV + S+ G A YG A
Sbjct: 109 EDEWRGIFETNLFSAFELSRYAHPLLKQHASS-AIVNIGSVSGLTH--VRSGAPYGMTKA 165
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAA 170
++ Q+ R A+E + IRVN +A L D Y + V E
Sbjct: 166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYY----------EQVIERT 215
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
P+ R + ++A+ V +L + Y+TG I VDG
Sbjct: 216 PMRR-VGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFLRY 255
|
Length = 257 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-08
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
++ +++++++ +N + + AV + E++ G I+ ++SIIG G G Y A
Sbjct: 102 KLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGF--GQTNYSA 158
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
A + ++ A+E+ K + VN I G + E V +E K+V + P R
Sbjct: 159 AKAGMLGFTKSLALELAKTNVTVNAICPGF-IDTEMVAEVPEEVRQKIVAK-IPKKR-FG 215
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+++A V+YL DG+ Y+TG + ++G
Sbjct: 216 QADEIAKGVVYLCRDGA-YITGQQLNING 243
|
Length = 247 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-08
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG--SIVFLTSIIGAERGLYPGAAAYGAC 118
E E+ ++ +N A + + +AV R M + +AG +I + S +G + + P AA+ GA
Sbjct: 107 EQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT-ITPYAASKGA- 164
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+ L R +E+ +H I+VNGIA G + V E + + P RW D
Sbjct: 165 ---VKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDP 221
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ +L ++L S S ++ G ++VDG
Sbjct: 222 Q-ELIGAAVFLSSKASDFVNGHLLFVDG 248
|
Length = 254 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 3e-08
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+++ ++++ ++++N A + L + + M + G I+ +TS++G PG A Y
Sbjct: 97 VRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYG-RIINITSVVGVTGN--PGQANYC 153
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLH 173
A A + ++ A EI + VN +A G + + ++ + + A P+
Sbjct: 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-----NDKQKEAIMGAIPMK 208
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
R + ++AS V YL S + Y+TG TI+V+G ++
Sbjct: 209 R-MGTGAEVASAVAYLASSEAAYVTGQTIHVNGGMAM 244
|
Length = 245 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-08
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
LL+AV KE +G I T++ + + P Y A++ R A E+
Sbjct: 115 GALNLLQAVLPDFKERGSGRVINIGTNL--FQNPVVP-YHDYTTAKAALLGFTRNMAKEL 171
Query: 134 GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 193
G + I VN ++ GL L+ A + + + PL + D+A V++ S
Sbjct: 172 GPYGITVNMVSGGL-LKVTDASAATPKEVFDAIAQTTPL-GKVTTPQDIADAVLFFASPW 229
Query: 194 SRYMTGTTIYVDG 206
+R +TG + VDG
Sbjct: 230 ARAVTGQNLVVDG 242
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-08
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 7 GGQPVEVVG-LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
GG+ V G + E D FD G LDA V+ + +
Sbjct: 51 GGRACVVAGDVANEADVIAMFDAVQSA----FGRLDALVNNAGIVAPSMPLADMDAARLR 106
Query: 66 KLVKINFVAPWFLLKAVGRRMKESK--AGGSIVFLTSIIGAERGLYPGAAA-YGACAASI 122
++ N + + + RR+ + GG+IV ++SI A R P Y ++
Sbjct: 107 RMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSI--ASRLGSPNEYVDYAGSKGAV 164
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKND 181
L A E+G H +RVN + GL ++ E + GQ RA +L PL R + ++
Sbjct: 165 DTLTLGLAKELGPHGVRVNAVRPGL-IETEIHASGGQPGRAARL-GAQTPLGRAGEA-DE 221
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQ 208
+A T+++L+SD + Y+TG + V G +
Sbjct: 222 VAETIVWLLSDAASYVTGALLDVGGGR 248
|
Length = 248 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 4e-08
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL-LK 80
E + + +A +G L V+ G Q+ DE+++++ IN V FL K
Sbjct: 62 DEAQWQALLAQAADAMGGLSVLVNNAGV-GSFGAIEQIELDEWRRVMAIN-VESIFLGCK 119
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
++ S+ SIV ++S+ + P AY A A++ L ++ A++ + + V
Sbjct: 120 HALPYLRASQPA-SIVNISSVAAFKAE--PDYTAYNASKAAVASLTKSIALDCARRGLDV 176
Query: 141 -----------NGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIY 188
GI + + +G+E A KL R PL R L +D+A V+Y
Sbjct: 177 RCNSIHPTFIRTGIVDPIFQR------LGEEEATRKLARGV-PLGR-LGEPDDVAHAVLY 228
Query: 189 LISDGSRYMTGTTIYVDGAQS 209
L SD SR++TG + +DG
Sbjct: 229 LASDESRFVTGAELVIDGGIC 249
|
Length = 251 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 25/216 (11%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK--MQDPLQVGEDEF 64
V+ + + + AV A + G LD V+ G DPL + ++++
Sbjct: 54 DVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNN---AGINVFADPLAMTDEDW 110
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTS-----IIGAERGLYPGAAAYGACA 119
++ ++ W +AV M E + GSIV + S II PG Y
Sbjct: 111 RRCFAVDLDGAWNGCRAVLPGMVE-RGRGSIVNIASTHAFKII-------PGCFPYPVAK 162
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLH--R 174
+ L R +E +RVN IA G L +++ A A + E L +
Sbjct: 163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAAR--AETLALQPMK 220
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ ++A T ++L SD + ++ T I +DG +S+
Sbjct: 221 RIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV 256
|
Length = 260 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 9e-08
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 86 MKESKAGGSIVFLTS--IIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
MK + G IV + S I GA +Y A +++ RT A+E+ ++ I VN +
Sbjct: 114 MKLREQG-RIVNICSRAIFGA-----LDRTSYSAAKSALVGCTRTWALELAEYGITVNAV 167
Query: 144 ARGLHLQDEYPIA--VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 201
A G + + VG E K V + P+ R L ++A+ + +L+SD + ++TG
Sbjct: 168 APGPIETELFRQTRPVGSEEE-KRVLASIPMRR-LGTPEEVAAAIAFLLSDDAGFITGQV 225
Query: 202 IYVDGAQSI 210
+ VDG S+
Sbjct: 226 LGVDGGGSL 234
|
Length = 234 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 1e-07
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGAC 118
+++ ++ +N A + + MK+ + G I+ + S+ GL +AY A
Sbjct: 102 TEKWDAIIALNLSAVFHTTRLALPHMKK-QGWGRIINIASV----HGLVASANKSAYVAA 156
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD--EYPIA-------VGQERAVK-LVRE 168
+ L + A+E + N I G L E I+ V QE+A + L+ E
Sbjct: 157 KHGVVGLTKVVALETAGTGVTCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLE 216
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P +++ + L T ++L SD + +TGT + VDG
Sbjct: 217 KQPSKQFVTPE-QLGDTAVFLASDAASQITGTAVSVDG 253
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 1e-07
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 12 EVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC-Y----TYEGKMQDPLQVGEDEF 64
+V LD+ +E E ++ +K G +D V+C Y Y K D V D+F
Sbjct: 58 SLVELDITDQESLEEFLSKSAEK----YGKIDGAVNCAYPRNKDYGKKFFD---VSLDDF 110
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI--IGAER-GLYPGAA-----AYG 116
+ + ++ + + + + K+ GG++V ++SI + A + +Y G + Y
Sbjct: 111 NENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYA 169
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRW 175
A A I L + A IRVN ++ G I Q A + ++
Sbjct: 170 AIKAGIIHLTKYLAKYFKDSNIRVNCVSPG-------GILDNQPEAFLNAYKKCCNGKGM 222
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
LD +D+ T+++L+SD S+Y+TG I VD
Sbjct: 223 LDP-DDICGTLVFLLSDQSKYITGQNIIVD 251
|
Length = 256 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 1e-07
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 2 MGSLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPL 57
+ GQ V + D+ E+ E AF +AV+K G D V+C + G +D
Sbjct: 47 AEANASGQKVSYISADLSDYEEVEQAFAQAVEK----GGPPDLVVNCAGISIPGLFED-- 100
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAY 115
+ +EF++ + +N+ + AV MKE + G IVF++S L G +AY
Sbjct: 101 -LTAEEFERGMDVNYFGSLNVAHAVLPLMKEQR-PGHIVFVSSQA----ALVGIYGYSAY 154
Query: 116 GACAASIHQLVRTAAMEIGKHKIRV 140
++ L + E+ + IRV
Sbjct: 155 CPSKFALRGLAESLRQELKPYNIRV 179
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-07
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 115 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 174
Y A++ L R A E+G + I VN ++ GL L+ A + L+ PL +
Sbjct: 159 YTTAKAALLGLTRNLAAELGPYGITVNMVSGGL-LRTTDASAATPDEVFDLIAATTPLRK 217
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + A V++ S +R +TG + VDG
Sbjct: 218 -VTTPQEFADAVLFFASPWARAVTGQNLVVDG 248
|
Length = 253 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 35/215 (16%)
Query: 5 LKGGQPVEVVGLDMEED--------REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP 56
L GG PV LD+ ++ G FD V A G
Sbjct: 41 LGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGP---------------V 85
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+ + + F + + +A R+ GGS+ F S A R G
Sbjct: 86 RALPLAAAQAAMDSKFWGAYRVARAA--RIAP---GGSLTF-VSGFAAVRPS-ASGVLQG 138
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL-HRW 175
A A++ L R A+E+ +RVN ++ GL + G R A L R
Sbjct: 139 AINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARR 196
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ D+A+ +++L ++G + TG+T+ VDG +I
Sbjct: 197 VGQPEDVANAILFLAANG--FTTGSTVLVDGGHAI 229
|
Length = 230 |
| >gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-07
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151
GGS++ LT G + P G A++ VR A + G IRVN I+ G
Sbjct: 138 GGSMLTLT--YGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAG----- 190
Query: 152 EYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204
P+ +G RA+ + +PL R + + +++ + +YL+SD S +TG +V
Sbjct: 191 --PVRTLAGAGIGDARAIFSYQQRNSPLRRTVTI-DEVGGSALYLLSDLSSGVTGEIHFV 247
Query: 205 DGAQSIT 211
D +I
Sbjct: 248 DSGYNIV 254
|
Length = 271 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 3e-07
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 36/136 (26%)
Query: 92 GGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA----- 144
GG+IV ++SI A RG+ P +AA G A L + A E +H IRVN +A
Sbjct: 136 GGAIVNVSSI--ATRGINRVPYSAAKGGVNA----LTASLAFEYAEHGIRVNAVAPGGTE 189
Query: 145 -------RGLHLQDEYPIAVGQERA-----VKLVREAAPLHRW--LDVKNDLASTVIYLI 190
R Q E QE+A V +++ + R+ +D + + +++L
Sbjct: 190 APPRRVPRNAAPQSE------QEKAWYQQIVDQTLDSSLMKRYGTID---EQVAAILFLA 240
Query: 191 SDGSRYMTGTTIYVDG 206
SD + Y+TGT + V G
Sbjct: 241 SDEASYITGTVLPVGG 256
|
Length = 260 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 4e-07
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 22/199 (11%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80
DR+ F AV + G+L+ V+ + E++F K+ IN + ++
Sbjct: 62 DRDQVFA-AVRQVVDTFGDLNVVVNNAGV-APTTPIETITEEQFDKVYNINVGGVIWGIQ 119
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
A K+ GG I+ TS G P A Y + ++ L +TAA ++ I V
Sbjct: 120 AAQEAFKKLGHGGKIINATSQAGVVGN--PELAVYSSTKFAVRGLTQTAARDLASEGITV 177
Query: 141 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW-------------LDVKNDLASTVI 187
N A G+ + P+ + A ++ A W L D+A+ V
Sbjct: 178 NAYAPGIV---KTPMM--FDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVS 232
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L S Y+TG TI VDG
Sbjct: 233 FLAGPDSDYITGQTIIVDG 251
|
Length = 256 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 6e-07
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF-- 64
GG+ +G+ M+ E A + +DK + G++D V +Q + F
Sbjct: 55 GGK---AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVS----NAGIQIVNPIENYSFAD 107
Query: 65 -KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
KK+ I+ + KA + M + GG ++++ S+ E P +AY +
Sbjct: 108 WKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS--PLKSAYVTAKHGLL 165
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHL----QDEYP-----IAVGQERAVKLVREAAPLHR 174
L R A E KH +R + + G + P + + +E VK V +
Sbjct: 166 GLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDG 225
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A TV++L S S +TG + V
Sbjct: 226 VFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH 257
|
Length = 262 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 6e-07
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 25/194 (12%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKINFVAPWFLL 79
E + D + + G LD VH + K + + D F + I+ +
Sbjct: 72 EASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISV----YSF 127
Query: 80 KAVGRRM-KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
AV +R K GGSI+ LT GAE+ + P G A++ V+ A+++G I
Sbjct: 128 TAVAQRAEKLMTDGGSILTLT-YYGAEK-VMPHYNVMGVAKAALEASVKYLAVDLGPKNI 185
Query: 139 RVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLIS 191
RVN I+ G PI +G R + K APL R + + ++ + +YL+S
Sbjct: 186 RVNAISAG-------PIKTLAASGIGDFRYILKWNEYNAPLRRTVTI-EEVGDSALYLLS 237
Query: 192 DGSRYMTGTTIYVD 205
D SR +TG +VD
Sbjct: 238 DLSRGVTGEVHHVD 251
|
Length = 272 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 7e-07
Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 16/191 (8%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E V + LG +D V G + +E+ +++ +N P+ L +
Sbjct: 59 ETLVKFVVYAMLEKLGRIDVLV-NNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
+ K G I+ + S + P + AY A + L AM +G IRVN
Sbjct: 118 RDELI--KNKGRIINIASTRAFQS--EPDSEAYAASKGGLVALTHALAMSLGPD-IRVNC 172
Query: 143 IARGLHLQDEYPIAVGQERAVKLVRE----AAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
I+ G E QE + + P R K D+A+ V++L + ++T
Sbjct: 173 ISPGWINTTEQ-----QEFTAAPLTQEDHAQHPAGRVGTPK-DIANLVLFLCQQDAGFIT 226
Query: 199 GTTIYVDGAQS 209
G T VDG +
Sbjct: 227 GETFIVDGGMT 237
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 8e-07
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLV 68
+EV+ LD+ + E + AV + + G +D V+ Y G +++ +E ++L
Sbjct: 48 LEVLELDVTD--EESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEE---TSIEEVRELF 102
Query: 69 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 128
++N P + +A M++ G IV ++S+ G P Y A A++ L +
Sbjct: 103 EVNVFGPLRVTRAFLPLMRKQG-SGRIVNVSSVAG--LVPTPFLGPYCASKAALEALSES 159
Query: 129 AAMEIGKHKIRV 140
+E+ I+V
Sbjct: 160 LRLELAPFGIKV 171
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 9e-07
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+++ ++++ VK+ +L +A+ M E K G I++ TS+ A + P A
Sbjct: 102 MEMSMEDWEGAVKLLLYPAVYLTRALVPAM-ERKGFGRIIYSTSV--AIKEPIPNIALSN 158
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV---KLVREA---- 169
S+ LVRT A E+G I VNGI G+ ++ + I + Q+RA K V EA
Sbjct: 159 VVRISMAGLVRTLAKELGPKGITVNGIMPGI-IRTDRVIQLAQDRAKREGKSVEEALQEY 217
Query: 170 ---APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
PL R L ++ V +L SD Y+ G I VDG +
Sbjct: 218 AKPIPLGR-LGEPEEIGYLVAFLASDLGSYINGAMIPVDGGR 258
|
Length = 263 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (113), Expect = 9e-07
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
+ E F ++V +N AP+F+++ R++++ I+ ++S A R P AY
Sbjct: 106 ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS---RIINISS--AATRISLPDFIAYSM 160
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
+I+ + T A ++G I VN I G D + + + +R +
Sbjct: 161 TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGE 220
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
V+ D+A T +L S SR++TG I V G +
Sbjct: 221 VE-DIADTAAFLASPDSRWVTGQLIDVSGGSCL 252
|
Length = 252 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 1e-06
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 113 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQ--ER 161
AY A A+I + A+ K IRVN IA R L ++ G ER
Sbjct: 172 PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNED-----GSLTER 226
Query: 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDG 206
A K++ P+ R+ + +L T+++L + S ++TG + VDG
Sbjct: 227 ANKIL-AHTPMGRFGKPE-ELLGTLLWLADEKASSFVTGVVLPVDG 270
|
Length = 278 |
| >gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
L R M + + S +GA R + P G AS+ +R A +GK I
Sbjct: 127 LAKAARPMMRGRNSAIVAL--SYLGAVRAI-PNYNVMGMAKASLEAGIRFTAACLGKEGI 183
Query: 139 RVNGIARGLHLQDEYPIAV-------GQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
R NGI+ G PI + + V PL R + ++ ++ +T +L+S
Sbjct: 184 RCNGISAG-------PIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE-EVGNTAAFLLS 235
Query: 192 DGSRYMTGTTIYVDGAQSI 210
D S +TG YVDG SI
Sbjct: 236 DLSSGITGEITYVDGGYSI 254
|
Length = 261 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-06
Identities = 57/244 (23%), Positives = 91/244 (37%), Gaps = 61/244 (25%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFD---------EAVDKAC-QILGNLDAFVHCYTYEGKMQ 54
L V+G+D E ++D A + G +DA + G
Sbjct: 4 LLRFLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-TA 62
Query: 55 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE--------R 106
V ++NF+ L +A+ RM GG+IV + S+ GAE +
Sbjct: 63 PVELV--------ARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHK 111
Query: 107 GL-----YPGAAAY--------GAC-----AASIHQLVRTAAMEIGKHKIRVNGIARGLH 148
L + AA+ A I +R A G IRVN +A G
Sbjct: 112 ALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGP- 170
Query: 149 LQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
PI +GQER + +A + R ++ A+ +++L SD +R++ G +
Sbjct: 171 --VFTPILGDFRSMLGQER---VDSDAKRMGR-PATADEQAAVLVFLCSDAARWINGVNL 224
Query: 203 YVDG 206
VDG
Sbjct: 225 PVDG 228
|
Length = 241 |
| >gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-06
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151
GGSIV LT GAE+ + P G A++ V+ A ++G++ IRVN I+ G
Sbjct: 139 GGSIVTLT-YYGAEK-VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAG----- 191
Query: 152 EYPI------AVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204
PI A+G +K APL R + D+ +YL S+ S+ +TG YV
Sbjct: 192 --PIKTLASSAIGDFSTMLKSHAATAPLKRNT-TQEDVGGAAVYLFSELSKGVTGEIHYV 248
Query: 205 DGAQSI 210
D +I
Sbjct: 249 DCGYNI 254
|
Length = 260 |
| >gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 3e-06
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 100 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-- 157
S +GAER + P G AS+ VR A+ +G IR NGI+ G PI
Sbjct: 145 SYLGAERVV-PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAG-------PIKTLA 196
Query: 158 -----GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+ + V APL R + ++ ++ + +L+SD + +TG +VD +
Sbjct: 197 ASGIKDFGKILDFVESNAPLRRNVTIE-EVGNVAAFLLSDLASGVTGEITHVDSGFNAVV 255
Query: 213 PRM 215
M
Sbjct: 256 GGM 258
|
Length = 260 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 3e-06
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
L+ G V V D+ + ++ ++ ++ G D ++ G + + DE
Sbjct: 44 ELRPGLRVTTVKADLSD--AAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDE 101
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+K +N +P L + R K+ ++V ++S GA + G Y + A+
Sbjct: 102 LQKYFDLNLTSPVCLTSTLLRAFKKRGLKKTVVNVSS--GAAVNPFKGWGLYCSSKAARD 159
Query: 124 QLVRTAAME 132
R A E
Sbjct: 160 MFFRVLAAE 168
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 3e-06
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
M ++ GG I+ L S+ G G Y A A + + A+E+ K KI VN IA
Sbjct: 122 MIRARQGGRIITLASVSGVMGN--RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
GL + + E + + P++R + ++AS +L+SDG+ Y+T I V+
Sbjct: 180 GL---IDTEMLAEVEHDLDEALKTVPMNR-MGQPAEVASLAGFLMSDGASYVTRQVISVN 235
Query: 206 G 206
G
Sbjct: 236 G 236
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG------------------------ 103
+K+N+ L++A+ R+++ G + V ++SI G
Sbjct: 80 LKVNYFGLRALMEALLPRLRKGH-GPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVA 138
Query: 104 -AERGLYPGAAAY-GACAASIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAV 157
AE PG AY G+ A R AA + +RVN +A G LQ
Sbjct: 139 LAEHAGQPGYLAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPR 198
Query: 158 GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
G E V P+ R + +++A + +L SD + ++ G ++VDG
Sbjct: 199 GGESVDAFV---TPMGRRAEP-DEIAPVIAFLASDAASWINGANLFVDG 243
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 11 VEVVGLDMEEDR--EGAFDEAVDKACQILGNLDAFVHCYTY------EGKMQDPLQVGED 62
+V D+ D E AF ++ +G +D VH Y G + D + G
Sbjct: 57 DLLVECDVASDESIERAFATIKER----VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYA 112
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ + + +A V + + G SIV LT G+ER + P G A+
Sbjct: 113 LAQDISAYSLIA-------VAKYARPLLNPGASIVTLT-YFGSERAI-PNYNVMGIAKAA 163
Query: 122 IHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPL 172
+ VR A ++GK IRVN I+ G+ + + R V V
Sbjct: 164 LESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDL-LKESDSRTVDGV------ 216
Query: 173 HRWLDVK-NDLASTVIYLISDGSRYMTGTTIYVD 205
V ++ +T +L+SD S +TG IYVD
Sbjct: 217 ----GVTIEEVGNTAAFLLSDLSTGVTGDIIYVD 246
|
Length = 252 |
| >gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 4e-06
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 78 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG----ACAASIHQLVRTAAMEI 133
LL+ G M GG+ + LT I A + PG YG + A++ R A E
Sbjct: 160 LLQHFGPIMNP---GGASISLTYI--ASERIIPG---YGGGMSSAKAALESDTRVLAFEA 211
Query: 134 G-KHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
G K+KIRVN I+ G L A+G + ++ APL + L +++ + +L S
Sbjct: 212 GRKYKIRVNTISAG-PLGSRAAKAIGFIDDMIEYSYANAPLQKELTA-DEVGNAAAFLAS 269
Query: 192 DGSRYMTGTTIYVD 205
+ +TG TIYVD
Sbjct: 270 PLASAITGATIYVD 283
|
Length = 303 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 4e-06
Identities = 66/226 (29%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 8 GQPVEVVGLDME--EDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQD-PLQVGE 61
G V VV D+ D + A D+ VD G LD FV + Y + D P + +
Sbjct: 51 GDHVLVVEGDVTSYADNQRAVDQTVDA----FGKLDCFVGNAGIWDYNTSLVDIPAETLD 106
Query: 62 DEFKKLVKINFVAPWFL-LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA--YGAC 118
F ++ +N V + L KA +K S GGS++F S YPG Y A
Sbjct: 107 TAFDEIFNVN-VKGYLLGAKAALPALKAS--GGSMIFTLS----NSSFYPGGGGPLYTAS 159
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVG-QERAVK-------LVREA 169
++ LVR A E+ IRVNG+A G + D P ++G E ++ ++
Sbjct: 160 KHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI 218
Query: 170 APLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSITRPR 214
PL + D + L S SR +TG I DG I R
Sbjct: 219 TPLQFAPQPE-DHTGPYVLLASRRNSRALTGVVINADGGLGIRGIR 263
|
Length = 263 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 7e-06
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
L++ E++K++++N + ++ +AV M E ++G I+ ++S G ++G +AY
Sbjct: 101 LELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSG-DIINISSTAG-QKG-AAVTSAYS 157
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGI---------ARGLHLQDEYPIAVGQ-ERAVKLV 166
A + L + E+ KH IRV + A L L D P V Q E + +
Sbjct: 158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFI 217
Query: 167 REAAPLHRWLDVKN 180
L++ +K+
Sbjct: 218 VAQLKLNKRTFIKS 231
|
Length = 239 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 7e-06
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
++ E+ ++ N + + + + + M E + G I+ ++S+ G +G + G Y
Sbjct: 97 KRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE-QGYGRIINISSVNG-LKGQF-GQTNYS 153
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWL 176
A A + + A E ++ I VN IA G ++ +G E +V P+ R L
Sbjct: 154 AAKAGMIGFTKALASEGARYGITVNCIAPG-YIATPMVEQMGPEVLQSIV-NQIPMKR-L 210
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A+ V +L+S+ + ++TG TI ++G
Sbjct: 211 GTPEEIAAAVAFLVSEAAGFITGETISING 240
|
Length = 245 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 8e-06
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
+GG+ + V D+ E D F EAVD+ LG LDA V+ G ++ +++ + +
Sbjct: 50 QGGEALAVAA-DVADEADVLRLF-EAVDRE---LGRLDALVN---NAGILEAQMRLEQMD 101
Query: 64 FKKLVKI---NFVAPWFLLKAVGRRM--KESKAGGSIVFLTSIIGAERGLYPGA-AAYGA 117
+L +I N V + + +RM + GG+IV ++S+ A R PG Y A
Sbjct: 102 AARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM--AARLGSPGEYIDYAA 159
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
+I + A E+ IRVN + G+ + E + G+ V V+ P+ R
Sbjct: 160 SKGAIDTMTIGLAKEVAAEGIRVNAVRPGV-IYTEIHASGGEPGRVDRVKAGIPMGRGGT 218
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A +++L+SD + Y TGT I V G
Sbjct: 219 A-EEVARAILWLLSDEASYTTGTFIDVSG 246
|
Length = 248 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 9e-06
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGAC 118
+F + +++N V + + + M G I+ + S +G++ AA +G
Sbjct: 102 GDFDRSLQVNLVGYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGV 161
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE--------YPIAVG-QERAVKLV-RE 168
L ++ A+++ +H I VN + G L+ Y +G +E V+ +
Sbjct: 162 G-----LTQSLALDLAEHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYID 216
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
PL R D + D+ + +++ S + Y TG +I + G Q
Sbjct: 217 KVPLKRGCDYQ-DVLNMLLFYASPKASYCTGQSINITGGQ 255
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K + +F + + + + + M+E GG+IV + S+ G G + YGA A++ L
Sbjct: 110 KHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRP--AYGLSIYGAMKAAVINL 164
Query: 126 VRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 182
+ A+E+ KIRVN IA G L + +G + + + + LD ++
Sbjct: 165 TKYLALEL-APKIRVNAIAPGFVKTKLGESLFKVLGMSEK-EFAEKFTLMGKILD-PEEV 221
Query: 183 ASTVIYLISDGSRYMTGTTIYVDGAQSI 210
A V ++ +TG +D +S+
Sbjct: 222 AEFVAAILK--IESITGQVFVLDSGESL 247
|
Length = 252 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 1e-05
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 8 GQPVEVVGLDMEE--DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQ-VGEDEF 64
G V D+E +G AV++ G +D ++ P + E++
Sbjct: 51 GDAAHVHTADLETYAGAQGVVRAAVER----FGRVDVLINNVG-GTIWAKPYEHYEEEQI 105
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ ++ + + +AV M E + G IV ++SI A RG+Y Y A ++
Sbjct: 106 EAEIRRSLFPTLWCCRAVLPHMLERQQG-VIVNVSSI--ATRGIY--RIPYSAAKGGVNA 160
Query: 125 LVRTAAMEIGKHKIRVNGIARG-------------LHLQDEYPIAVGQERAVKLVREAAP 171
L + A E + IRVN +A G + ++ V +R V +++
Sbjct: 161 LTASLAFEHARDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEK--VWYQRIVDQTLDSSL 218
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ R+ + ++ +++L SD + Y+TGT + V G
Sbjct: 219 MGRYGTI-DEQVRAILFLASDEASYITGTVLPVGG 252
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 1e-05
Identities = 58/220 (26%), Positives = 87/220 (39%), Gaps = 49/220 (22%)
Query: 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLV 68
+P V+ LD+ + D+ + + LD VH + P + +
Sbjct: 57 EPAPVLELDVTNEEH--LASLADRVREHVDGLDGVVHSIGFA-----P--------QSAL 101
Query: 69 KINFV-APW-----------FLLKAVGRRMKE-SKAGGSIVFLTSIIGAERGLYPGAAAY 115
NF+ APW + LK++ + + GGSIV L A +P
Sbjct: 102 GGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLD--FDATVA-WPAYDWM 158
Query: 116 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVRE 168
G A++ R A ++G IRVN +A G PI G E + E
Sbjct: 159 GVAKAALESTNRYLARDLGPRGIRVNLVAAG-------PIRTLAAKAIPGFELLEEGWDE 211
Query: 169 AAPLHRWLDVKN--DLASTVIYLISDGSRYMTGTTIYVDG 206
APL W DVK+ +A V+ L+SD TG ++VDG
Sbjct: 212 RAPLG-W-DVKDPTPVARAVVALLSDWFPATTGEIVHVDG 249
|
Length = 256 |
| >gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-05
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152
GS + S +GAER + P G AS+ VR A +G +RVN I+ G
Sbjct: 138 GSALLTLSYLGAERAI-PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAG------ 190
Query: 153 YPIAVGQERAVKLVRE-------AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
PI +K R+ P+ R + ++ D+ ++ +L SD S ++G ++VD
Sbjct: 191 -PIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSAAFLCSDLSAGISGEVVHVD 248
Query: 206 GAQSI 210
G SI
Sbjct: 249 GGFSI 253
|
Length = 262 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-05
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
EED + V++ G +D V+ + Q + EF+ L+ +N ++ +
Sbjct: 71 EEDIKTLISVTVER----FGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
K +++S+ G+I+ L+S++G+ AA Y A +I + + A++ ++ +
Sbjct: 127 SKYALPHLRKSQ--GNIINLSSLVGSIG--QKQAAPYVATKGAITAMTKALAVDESRYGV 182
Query: 139 RVNGIARG---LHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
RVN I+ G L +E A +K A L R + + + ++L ++ +
Sbjct: 183 RVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGR-MGTEAESGLAALFLAAEAT 241
Query: 195 RYMTGTTIYVDG 206
+ TG + + G
Sbjct: 242 -FCTGIDLLLSG 252
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK---LVREAAPLHRWL 176
A++ RT A + +IRVN I G L R L R + P
Sbjct: 164 AALWTATRTLAQALAP-RIRVNAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTP----- 217
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
++A+ V YL+ + +TG I VDG Q
Sbjct: 218 ---EEIAAAVRYLLD--APSVTGQMIAVDGGQ 244
|
Length = 258 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 2e-05
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-YPGAAAYGACA 119
E+ F +++ +N AP+FL++ + + +A G ++ ++S AE L + G+ AYG
Sbjct: 111 EEIFDEIMAVNIKAPFFLIQ---QTLPLLRAEGRVINISS---AEVRLGFTGSIAYGLSK 164
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 179
+++ + A +G+ I VN I G D + ++ R V+
Sbjct: 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE 224
Query: 180 NDLASTVIYLISDGSRYMTGTTIYVDGA 207
D+A V +L S SR++TG I V G
Sbjct: 225 -DIADAVAFLASSDSRWVTGQIIDVSGG 251
|
Length = 254 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-05
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGAC 118
+F + +++N V + + R M G I+ + S +G++ AA +G
Sbjct: 103 GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGV 162
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL------VREA--- 169
L ++ A+++ ++ I V+ + G L+ ++ + A KL V +
Sbjct: 163 G-----LTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYID 217
Query: 170 -APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
PL R D + D+ + +++ S + Y TG +I V G Q
Sbjct: 218 KVPLKRGCDYQ-DVLNMLLFYASPKASYCTGQSINVTGGQ 256
|
Length = 259 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 2e-05
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 70 INFVAPWFLLKAVGRRM-KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 128
+N A + ++AV M K S+ G++V + S+ G +P AY A A + +
Sbjct: 107 LNLEAAYLCVEAVLEGMLKRSR--GAVVNIGSVNGMAALGHP---AYSAAKAGLIHYTKL 161
Query: 129 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVI 187
A+E G+ IR N +A G + V V + +++ PL + D+A+ V+
Sbjct: 162 LAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPD-DVANAVL 220
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L S +R +TG + VDG
Sbjct: 221 FLASPAARAITGVCLPVDG 239
|
Length = 257 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 9/137 (6%)
Query: 6 KGGQPVEV-VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
GGQ + + V + E+ + VD+ G LD V+ + F
Sbjct: 62 AGGQALPIVVDVRDEDQVRALVEATVDQF----GRLDILVN-NAGAIWLSLVEDTPAKRF 116
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ ++N + L +A M ++ G I+ ++ + G AY A A + +
Sbjct: 117 DLMQRVNLRGTYLLSQAALPHMVKAGQG-HILNISPPLSLRPA--RGDVAYAAGKAGMSR 173
Query: 125 LVRTAAMEIGKHKIRVN 141
L A E+ +H I VN
Sbjct: 174 LTLGLAAELRRHGIAVN 190
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
L G D ++++ +N + + KA M GSI+ S + A G +Y
Sbjct: 98 LNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFV-AVMGSATSQISYT 155
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVK-LVREAAP 171
A + + R ++ + IRVN + G LQ+ + A ERA + LV P
Sbjct: 156 ASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELF--AKDPERAARRLVH--VP 211
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209
+ R+ + ++A+ V +L SD + ++T +T VDG S
Sbjct: 212 MGRFAE-PEEIAAAVAFLASDDASFITASTFLVDGGIS 248
|
Length = 255 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 37 LGNLDAFVHCYTY---EGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93
LG +D VH + E L+ ++ F ++I+ + L +A+ + + G
Sbjct: 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GA 137
Query: 94 SIVFLTSIIGAERGLYPGAAAY-------GACAASIHQLVRTAAMEIGKHKIRVNGIARG 146
S++ L+ Y G Y G A++ VR A+++GK IRVN I+ G
Sbjct: 138 SVLTLS---------YLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAG 188
Query: 147 LHLQDEYPI------AVGQERAVKLVREA-APLHRWLDVKNDLASTVIYLISDGSRYMTG 199
PI +G R + E APL + + ++ ++ ++ +YL+SD S +TG
Sbjct: 189 -------PIKTLAASGIGDFRMILKWNEINAPLKKNVSIE-EVGNSGMYLLSDLSSGVTG 240
Query: 200 TTIYVDGAQSI 210
YVD +I
Sbjct: 241 EIHYVDAGYNI 251
|
Length = 274 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-05
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 53 MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM-------KESKAGGSIVFLTSIIGAE 105
Q + V +F + N +F+ + V +RM +K GG I+ + S+ G
Sbjct: 99 TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR 158
Query: 106 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165
+ P Y A++ + R A+E G+H I VN I G ++ E + +
Sbjct: 159 --VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPG-YIDTEINHHHWETEQGQK 215
Query: 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
+ P R + DL ++ L +D S+++ G I D
Sbjct: 216 LVSMLPRKR-VGKPEDLDGLLLLLAADESQFINGAIISAD 254
|
Length = 258 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 4e-05
Identities = 42/198 (21%), Positives = 70/198 (35%), Gaps = 15/198 (7%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
G QP LD+ + + LD +H G + +
Sbjct: 50 EEGGRQPQ-WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQV 108
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
++ + ++N A + L +A+ + +S AG S+VF +S +G + GA Y +
Sbjct: 109 WQDVXQVNVNATFMLTQALLPLLLKSDAG-SLVFTSSSVGRQGRANWGA--YAVSKFATE 165
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
L + A E + +RVN I G P L D+
Sbjct: 166 GLXQVLADEYQQRNLRVNCINPG---------GTRTAMRASAFPTEDPQK--LKTPADIM 214
Query: 184 STVIYLISDGSRYMTGTT 201
++L+ D SR TG T
Sbjct: 215 PLYLWLMGDDSRRKTGMT 232
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 4e-05
Identities = 49/228 (21%), Positives = 85/228 (37%), Gaps = 34/228 (14%)
Query: 11 VEVVGLDMEEDREGAFD-------------EAVDKACQILGNLDAFVHCYTYE--GKMQD 55
V+ D++E D + +D G +D V+ E G +
Sbjct: 31 SNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHA 90
Query: 56 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI--IGAERGLYPGAA 113
V EDE+ +++ +N + + K M + G I+ + S+ R AA
Sbjct: 91 ---VEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRN----AA 142
Query: 114 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARG------LHLQDEYPIAVGQERAVKLVR 167
AY ++ L R+ A++ IR + G L E + E + +R
Sbjct: 143 AYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIR 201
Query: 168 EAAPLHRWLDV--KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
E +H V ++A V +L SD + ++TG + VDG P
Sbjct: 202 EWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRALIP 249
|
Length = 258 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152
G I+ ++S+ G ++G + G Y A A + + A E + VN I+ G ++ +
Sbjct: 130 GRIINISSVNG-QKGQF-GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG-YIATD 186
Query: 153 YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208
+A+ ++ +V P+ R L ++A+ V +L S+ + Y+TG T+ ++G
Sbjct: 187 MVMAMREDVLNSIV-AQIPVGR-LGRPEEIAAAVAFLASEEAGYITGATLSINGGL 240
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-05
Identities = 24/138 (17%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
+ ++ LD+ ++ + + AV + G LD ++ +V ++
Sbjct: 43 GASHSRLHILELDVTDEIAESAE-AVAERLGDAG-LDVLINNAGILHSYGPASEVDSEDL 100
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASI 122
++ ++N + P L +A + A I+ ++S +G + + Y A A++
Sbjct: 101 LEVFQVNVLGPLLLTQAF-LPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAAL 158
Query: 123 HQLVRTAAMEIGKHKIRV 140
+ L ++ A+E+ + I V
Sbjct: 159 NMLTKSLAVELKRDGITV 176
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCY----------TYEGKMQDPLQVGEDEFKKLV 68
EED E F + + G L+ ++ +GK+ + + ++F+ ++
Sbjct: 66 EEDVEATFAQIA----EDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSL--EQFQSVI 119
Query: 69 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 128
+N + + +M ES + G I+ ++SI R G Y A A + + T
Sbjct: 120 DVNLTGVFLCGREAAAKMIESGSKGVIINISSI---ARAGNMGQTNYSASKAGVAAMTVT 176
Query: 129 AAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
A E+ ++ IRV IA G+ P A+ ER K++ P+ R L ++A
Sbjct: 177 WAKELARYGIRVAAIAPGVIETEMTAAMKPEAL--ERLEKMI----PVGR-LGEPEEIAH 229
Query: 185 TVIYLISDGSRYMTGTTIYVDGA 207
TV ++I + Y+TG + +DG
Sbjct: 230 TVRFIIE--NDYVTGRVLEIDGG 250
|
Length = 253 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 1e-04
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 10/130 (7%)
Query: 7 GGQPVEVVGLDMEEDREGAFDE-AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-DEF 64
G + D+ E F++ A A G LD VHC Y + PL E+
Sbjct: 54 GHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALS-PLDFQTVAEW 112
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASI 122
+IN VAP L +A+ +K+S S++F +G G P A +GA A++
Sbjct: 113 VNQYRINTVAPMGLTRALFPLLKQS-PDASVIF----VGESHGETPKAYWGGFGASKAAL 167
Query: 123 HQLVRTAAME 132
+ L + AA E
Sbjct: 168 NYLCKVAADE 177
|
Length = 239 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 84 RRM--KESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGKHKIRV 140
+RM K +GG+IV ++S A R PG Y A +I L ++E+ IRV
Sbjct: 124 KRMALKHGGSGGAIVNVSS--AASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181
Query: 141 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
N + G + E + G+ V V+ P+ R ++A +++L+SD + Y+TG+
Sbjct: 182 NCVRPGF-IYTEMHASGGEPGRVDRVKSNIPMQRG-GQPEEVAQAIVWLLSDKASYVTGS 239
Query: 201 TIYVDGAQ 208
I + G +
Sbjct: 240 FIDLAGGK 247
|
Length = 247 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 23/198 (11%)
Query: 28 EAVDKACQILGNLDAFVHC---YTYEGKMQD-PLQVGEDEFKKLVKINFVAPWFL-LKAV 82
AV + + G LD F+ + Y + D P + ++ F +L IN V + L KA
Sbjct: 67 RAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHIN-VKGYILGAKAA 125
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
+ ++ GS++F S G YP G Y A ++ LV+ A E+ H IRV
Sbjct: 126 LPALYATE--GSVIFTVS----NAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IRV 178
Query: 141 NGIARGLHLQDEY-PIAVGQERAVK-------LVREAAPLHRWLDVKNDLASTVIYLISD 192
NG+A G + D P ++GQ +++ PL + ++ + V
Sbjct: 179 NGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLASRG 238
Query: 193 GSRYMTGTTIYVDGAQSI 210
+R TGT I DG +
Sbjct: 239 DNRPATGTVINYDGGMGV 256
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G V LD+ +D + + A D + G LD V+ K D ++ +
Sbjct: 47 AEGLSVRFHQLDVTDD--ASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQAR 104
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+ +K NF + +A+ +K+S AG IV ++S +G +AYG A+++ L
Sbjct: 105 ETMKTNFFGTVDVTQALLPLLKKSPAG-RIVNVSSGLG------SLTSAYGVSKAALNAL 157
Query: 126 VRTAAMEIGKHKIRVNGIARGL 147
R A E+ + I+VN G
Sbjct: 158 TRILAKELKETGIKVNACCPGW 179
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 2e-04
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGEDE 63
G VV LDM ++ V++A ++ G LD + + D D
Sbjct: 50 LGAPSPHVVPLDMS--DLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHD---TSIDV 104
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI---IGAERGLYPGAAAYGACAA 120
+K++++N+ P L KA + E GSIV ++SI IG P AY AA
Sbjct: 105 DRKIMEVNYFGPVALTKAALPHLIERS-QGSIVVVSSIAGKIGV-----PFRTAY---AA 155
Query: 121 SIHQL 125
S H L
Sbjct: 156 SKHAL 160
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Query: 3 GSLKGGQPVEVVGLDMEE-DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--DPLQV 59
G VE V D + + A +A+ G +D VH G + +
Sbjct: 39 ALSASGGDVEAVPYDARDPEDARALVDALR---DRFGRIDVLVHN---AGIGRPTTLREG 92
Query: 60 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA 119
+ E + IN +AP L +A+ ++E+ G +VFL S+ G +R L G A Y A
Sbjct: 93 SDAELEAHFSINVIAPAELTRALLPALREA-GSGRVVFLNSLSG-KRVL-AGNAGYSASK 149
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARG 146
++ L E H +RV+ + G
Sbjct: 150 FALRALAHALRQEGWDHGVRVSAVCPG 176
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 3e-04
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+ V++A + LG LD V+ + ++D + ++F K N A ++L KA +
Sbjct: 123 QLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHL- 181
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146
G SI+ SI + P Y + A+I + A ++ + IRVN +A G
Sbjct: 182 --PPGASIINTGSIQSYQPS--PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPG 236
|
Length = 300 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 4e-04
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
L+ G + F ++ N + + + +K S+ G+IV ++S A G G + Y
Sbjct: 99 LEAGREAFVASLERNLIHYYVMAHYCLPHLKASR--GAIVNISSKT-ALTG-QGGTSGYA 154
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGI----------ARGLHLQDEYPIAVGQERAVKLV 166
A + L R A+ + K +RVN + + D+ E + +
Sbjct: 155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDD------PEAKLAAI 208
Query: 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
PL + ++A T ++L+S+ S + TG ++VDG
Sbjct: 209 TAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDG 248
|
Length = 258 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 4e-04
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 54 QDPLQVGEDEFKKLVKINFVAPWFLLKA-VGRRMKESKAGGSIVFLTSIIGA-ERGLYPG 111
Q E +L N +AP L + +G+ G + F++S +G+ E
Sbjct: 87 QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQ---GVLAFMSSQLGSVELPDGGE 143
Query: 112 AAAYGACAASIHQLVRTAAMEIGKHKIRV 140
Y A A+++ + R+ E+G+ + V
Sbjct: 144 MPLYKASKAALNSMTRSFVAELGEPTLTV 172
|
Length = 225 |
| >gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 9e-04
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYG----ACAASIHQLVRTAAMEIG-KHKIRVNGIA 144
GGS + LT + + R + PG YG + A++ + A E G + IRVN I+
Sbjct: 168 NPGGSTISLT-YLASMRAV-PG---YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS 222
Query: 145 RGLHLQDEYPIAVG-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 203
G L A+G ER V ++ APL ++ + + + +L+S + +TG T+Y
Sbjct: 223 AG-PLASRAGKAIGFIERMVDYYQDWAPLPEPMEAE-QVGAAAAFLVSPLASAITGETLY 280
Query: 204 VD 205
VD
Sbjct: 281 VD 282
|
Length = 299 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.001
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 14/127 (11%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFK 65
G V V D+ DR+ A + LG LD VH G + D ++ + F+
Sbjct: 51 GAEVTVAACDVA-DRD-ALAALLAALPAALGPLDGVVHN---AGVLDDGPLEELTPERFE 105
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+++ W L + G+ V +S+ G PG A Y A A++ L
Sbjct: 106 RVLAPKVTGAWNLHELTRDL-----DLGAFVLFSSVAGVLGS--PGQANYAAANAALDAL 158
Query: 126 VRTAAME 132
E
Sbjct: 159 AEHRRAE 165
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.001
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 58 QVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGA 117
+ +E V +N +AP L + K+ K ++ ++S GA + Y G +AY +
Sbjct: 99 KAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS--GAAKNPYFGWSAYCS 156
Query: 118 CAASIHQLVRTAAME 132
A + +T A E
Sbjct: 157 SKAGLDMFTQTVATE 171
|
Length = 251 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYP--GAAAYGACAA 120
+K + +N M ++K G G IV + S+ GLYP Y A
Sbjct: 104 EKTIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVA----GLYPAPQFPVYSASKH 159
Query: 121 SIHQLVRTAAME-IGKHKIRVNGIARGL 147
+ R+ A K +RVN I G
Sbjct: 160 GVVGFTRSLADLLEYKTGVRVNAICPGF 187
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.001
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89
V +A + LG LD + + D + ++F+K IN A ++L + +
Sbjct: 119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEA---IPLL 175
Query: 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG--- 146
G SI+ +SI + P Y A A+I R A ++ + IRVN +A G
Sbjct: 176 PKGASIITTSSIQAYQPS--PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIW 233
Query: 147 --LHL-----QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
L + QD+ P GQ+ +K + A +LA +YL S S Y+T
Sbjct: 234 TALQISGGQTQDKIP-QFGQQTPMKRAGQPA----------ELAPVYVYLASQESSYVTA 282
Query: 200 TTIYVDGAQSI 210
V G + +
Sbjct: 283 EVHGVCGGEHL 293
|
Length = 294 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.002
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 30 VDKACQILGNLDAFVHCYTYEGKMQDPLQVG--EDEFKKLVKINFVAPWFLLKAVGRRMK 87
VD A + G LD V+ G ++D + E+E+ ++ ++ + L+ +
Sbjct: 83 VDAAVETFGGLDVLVN---NAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWR 139
Query: 88 -ESKAG----GSIVFLTSIIGAERGLYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
ESKAG I+ +S GA GL G Y A A I L AA E+G++ + V
Sbjct: 140 AESKAGRAVDARIINTSS--GA--GLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTV 195
Query: 141 NGIA 144
N IA
Sbjct: 196 NAIA 199
|
Length = 286 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
K G VEV+ D+ E E DE ++ I D V+ + G L++ DE
Sbjct: 53 KTGVEVEVIPADLSDPEALERLEDELKERGGPI----DVLVNNAGF-GTFGPFLELSLDE 107
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAAS 121
++++++N +A L KAV M E AG I+ + S GL P A Y A A
Sbjct: 108 EEEMIQLNILALTRLTKAVLPGMVERGAGH-IINIGSAA----GLIPTPYMAVYSATKAF 162
Query: 122 IHQLVRTAAMEIGKHKIRV 140
+ E+ ++V
Sbjct: 163 VLSFSEALREELKGTGVKV 181
|
Length = 265 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 36.9 bits (86), Expect = 0.004
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP--GAAAYGAC 118
E+++ +++++ + + +A M++ K G I+ +S A GLY G A Y A
Sbjct: 109 EEDWDLVMRVHLKGSFKVTRAAWPYMRKQK-FGRIINTSS--AA--GLYGNFGQANYSAA 163
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIA 144
+ L T A+E K+ I N IA
Sbjct: 164 KLGLLGLSNTLAIEGAKYNITCNTIA 189
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 219 | |||
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.98 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.98 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.98 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.98 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.98 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.98 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.98 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.97 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.97 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.97 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.97 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.97 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.97 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.97 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.97 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.97 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.97 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.97 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.97 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.97 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.97 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.97 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.97 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.97 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.97 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.97 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.97 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.97 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.96 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.96 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.96 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.96 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.96 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.96 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.96 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.96 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.96 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.96 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.96 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.95 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.95 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.95 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.95 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.95 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.95 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.94 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.94 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.94 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.94 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.94 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.94 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.94 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.94 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.94 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.94 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.94 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.94 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.94 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.94 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.93 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.93 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.93 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.93 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.92 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.92 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.92 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.92 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.91 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.91 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.9 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.9 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.9 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.9 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.89 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.88 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.88 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.87 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.86 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.85 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.85 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.79 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.78 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.76 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.65 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.63 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.51 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.51 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.5 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.49 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.48 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.47 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.46 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.44 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.43 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.41 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.38 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.33 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.33 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.29 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.23 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.21 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.2 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.19 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.18 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.17 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.14 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.13 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.13 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.1 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.09 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.09 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.07 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.07 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.06 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.02 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 98.97 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 98.96 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 98.95 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 98.94 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 98.94 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 98.93 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 98.92 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 98.88 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 98.88 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 98.88 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 98.88 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 98.87 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 98.85 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 98.84 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 98.83 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.8 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.76 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 98.74 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.71 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 98.63 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 98.61 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 98.6 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 98.59 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 98.58 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 98.56 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.5 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 98.5 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 98.34 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 98.31 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 98.28 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 98.26 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.24 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.24 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 98.12 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 98.11 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.08 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.9 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.75 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 97.58 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 97.45 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.31 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 97.25 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 97.18 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 97.17 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.46 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 96.41 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 95.84 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 95.69 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 95.57 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 95.28 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 94.99 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 94.42 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 93.11 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 92.63 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 91.07 | |
| PLN00106 | 323 | malate dehydrogenase | 87.51 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 84.55 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 83.72 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 83.61 | |
| PF12241 | 237 | Enoyl_reductase: Trans-2-enoyl-CoA reductase catal | 81.41 |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=235.29 Aligned_cols=196 Identities=23% Similarity=0.380 Sum_probs=175.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++...+.||++++ ++++..+++..+.+|+++++|||||+. ....+..+..++|+..+.+|+.|.|+++|++.+.|
T Consensus 60 g~~~h~aF~~DVS~a--~~v~~~l~e~~k~~g~psvlVncAGIt-rD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~ 136 (256)
T KOG1200|consen 60 GYGDHSAFSCDVSKA--HDVQNTLEEMEKSLGTPSVLVNCAGIT-RDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAM 136 (256)
T ss_pred CCCccceeeeccCcH--HHHHHHHHHHHHhcCCCcEEEEcCccc-cccceeeccHHHHHHHHHhhchhhHHHHHHHHHHH
Confidence 335778899999999 999999999999999999999999996 77888899999999999999999999999999995
Q ss_pred HhcC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 87 KESK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 87 ~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
...+ .+.+||++||+.+.. + .-++..|+++|+++.+|+|++++|++++|||+|.+.||++.|||..... + .....
T Consensus 137 ~~~~~~~~sIiNvsSIVGki-G-N~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp-~-~v~~k 212 (256)
T KOG1200|consen 137 VMNQQQGLSIINVSSIVGKI-G-NFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMP-P-KVLDK 212 (256)
T ss_pred HHhcCCCceEEeehhhhccc-c-cccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcC-H-HHHHH
Confidence 5433 245999999999984 4 5788999999999999999999999999999999999999999998753 3 33334
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...++|++|++.++ |+|..+.||+|+.++++||+.+.++||..+
T Consensus 213 i~~~iPmgr~G~~E-evA~~V~fLAS~~ssYiTG~t~evtGGl~m 256 (256)
T KOG1200|consen 213 ILGMIPMGRLGEAE-EVANLVLFLASDASSYITGTTLEVTGGLAM 256 (256)
T ss_pred HHccCCccccCCHH-HHHHHHHHHhccccccccceeEEEeccccC
Confidence 44899999999998 999999999999999999999999999864
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=247.11 Aligned_cols=189 Identities=30% Similarity=0.467 Sum_probs=171.9
Q ss_pred EEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
+++||++++ ++++++++++.+.+ |++|++|||+|.... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+
T Consensus 48 ~~~~D~~~~--~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (241)
T PF13561_consen 48 VIQCDLSDE--ESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK 125 (241)
T ss_dssp EEESCTTSH--HHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred eEeecCcch--HHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 699999999 99999999999999 999999999998633 378888999999999999999999999999998876
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+|+||++||..+... .+++..|+++|+|+++|+|+++.|+++ +|||||+|.||++.|++.......+...+...
T Consensus 126 ---~gsii~iss~~~~~~--~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~ 200 (241)
T PF13561_consen 126 ---GGSIINISSIAAQRP--MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELK 200 (241)
T ss_dssp ---EEEEEEEEEGGGTSB--STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHH
T ss_pred ---CCCcccccchhhccc--CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhh
Confidence 589999999988633 688889999999999999999999999 99999999999999998666555566667777
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++|+++|+ |||++++||+|+.++++|||+|.+|||++
T Consensus 201 ~~~pl~r~~~~~-evA~~v~fL~s~~a~~itG~~i~vDGG~s 241 (241)
T PF13561_consen 201 KRIPLGRLGTPE-EVANAVLFLASDAASYITGQVIPVDGGFS 241 (241)
T ss_dssp HHSTTSSHBEHH-HHHHHHHHHHSGGGTTGTSEEEEESTTGG
T ss_pred hhhccCCCcCHH-HHHHHHHHHhCccccCccCCeEEECCCcC
Confidence 889999999888 99999999999999999999999999985
|
... |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=242.34 Aligned_cols=194 Identities=24% Similarity=0.281 Sum_probs=168.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
.++++++||++|+ ++++++++++.+++|++|++|||||...+ ..++.+.+.++|++.+++|+.+++.+++.++|+
T Consensus 55 ~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~ 132 (252)
T PRK06079 55 EEDLLVECDVASD--ESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPL 132 (252)
T ss_pred CceeEEeCCCCCH--HHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHh
Confidence 4678999999999 99999999999999999999999997532 267788999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|.+ +|+||++||..+.. + .+.+..|+++|+|+.+|+++++.|++++|||+|+|+||+|+|++.......+...+.
T Consensus 133 ~~~---~g~Iv~iss~~~~~-~-~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~ 207 (252)
T PRK06079 133 LNP---GASIVTLTYFGSER-A-IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKE 207 (252)
T ss_pred ccc---CceEEEEeccCccc-c-CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHH
Confidence 964 58999999988863 2 578899999999999999999999999999999999999999976543222222333
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|++++.+|+ |+|+++.||+++.+++++|+++.+|||+++
T Consensus 208 ~~~~~p~~r~~~pe-dva~~~~~l~s~~~~~itG~~i~vdgg~~~ 251 (252)
T PRK06079 208 SDSRTVDGVGVTIE-EVGNTAAFLLSDLSTGVTGDIIYVDKGVHL 251 (252)
T ss_pred HHhcCcccCCCCHH-HHHHHHHHHhCcccccccccEEEeCCceec
Confidence 34567889999998 999999999999999999999999999764
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=240.98 Aligned_cols=196 Identities=27% Similarity=0.438 Sum_probs=171.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++++ ++++++++++.+.+|++|++|||||.. ...++.+.++++|++++++|+.+++.+++.+++.|+
T Consensus 54 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~iD~lv~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 130 (251)
T PRK12481 54 GRKFHFITADLIQQ--KDIDSIVSQAVEVMGHIDILINNAGII-RRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFV 130 (251)
T ss_pred CCeEEEEEeCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 557788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+||++||..+... .+....|+++|+|+++|+++++.|++++|||+|.|+||++.|++.......+...+...
T Consensus 131 ~~~~~g~ii~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~ 208 (251)
T PRK12481 131 KQGNGGKIINIASMLSFQG--GIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAIL 208 (251)
T ss_pred HcCCCCEEEEeCChhhcCC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHH
Confidence 7643589999999988733 47788999999999999999999999999999999999999998765332222222333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++++.+|+ |+|+++.||+++.+.+++|+++.+|||+.
T Consensus 209 ~~~p~~~~~~pe-eva~~~~~L~s~~~~~~~G~~i~vdgg~~ 249 (251)
T PRK12481 209 ERIPASRWGTPD-DLAGPAIFLSSSASDYVTGYTLAVDGGWL 249 (251)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCcCCceEEECCCEe
Confidence 567888989988 99999999999999999999999999975
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=245.04 Aligned_cols=194 Identities=23% Similarity=0.287 Sum_probs=166.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
...++||++|. ++++++++++.+++|++|++|||||+... ..++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 59 ~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~ 136 (271)
T PRK06505 59 DFVLPCDVEDI--ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP 136 (271)
T ss_pred ceEEeCCCCCH--HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc
Confidence 35789999999 99999999999999999999999997532 14677899999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... .+.+..|+++|+|+.+|+|+++.|++++|||||+|+||++.|++...............
T Consensus 137 ~---~G~Iv~isS~~~~~~--~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~ 211 (271)
T PRK06505 137 D---GGSMLTLTYGGSTRV--MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQ 211 (271)
T ss_pred c---CceEEEEcCCCcccc--CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHh
Confidence 3 589999999988632 57888999999999999999999999999999999999999997543222212222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...|++++.+|+ |+|++++||+++.+.++||+++.+|||+++..
T Consensus 212 ~~~p~~r~~~pe-eva~~~~fL~s~~~~~itG~~i~vdgG~~~~~ 255 (271)
T PRK06505 212 RNSPLRRTVTID-EVGGSALYLLSDLSSGVTGEIHFVDSGYNIVS 255 (271)
T ss_pred hcCCccccCCHH-HHHHHHHHHhCccccccCceEEeecCCcccCC
Confidence 456888988998 99999999999999999999999999987654
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=244.55 Aligned_cols=193 Identities=25% Similarity=0.327 Sum_probs=165.7
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++||++|. ++++++++++.+++|++|++|||||+..+ ..++.+.+.++|++++++|+.+++++++.++|.|++
T Consensus 58 ~~~~~Dv~d~--~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~ 135 (274)
T PRK08415 58 YVYELDVSKP--EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND 135 (274)
T ss_pred eEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc
Confidence 6789999999 99999999999999999999999997532 357788999999999999999999999999999964
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+|+||++||..+..+ .+.+..|+++|+|+.+|+++++.|++++|||+|+|+||+++|++................
T Consensus 136 ---~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 210 (274)
T PRK08415 136 ---GASVLTLSYLGGVKY--VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEI 210 (274)
T ss_pred ---CCcEEEEecCCCccC--CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhh
Confidence 489999999888633 577889999999999999999999999999999999999999865432111112222224
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|++++.+|+ |+|++++||+++.+.++||+++.+|||+.+..
T Consensus 211 ~~pl~r~~~pe-dva~~v~fL~s~~~~~itG~~i~vdGG~~~~~ 253 (274)
T PRK08415 211 NAPLKKNVSIE-EVGNSGMYLLSDLSSGVTGEIHYVDAGYNIMG 253 (274)
T ss_pred hCchhccCCHH-HHHHHHHHHhhhhhhcccccEEEEcCcccccC
Confidence 56888989998 99999999999989999999999999987653
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=239.61 Aligned_cols=194 Identities=32% Similarity=0.445 Sum_probs=167.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++|++|+ ++++++++++.+++|++|++|||||+... ..++.+.+.++|++++++|+.+++.+++.++|.|
T Consensus 60 ~~~~~~~Dl~d~--~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m 137 (258)
T PRK07370 60 PSLFLPCDVQDD--AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM 137 (258)
T ss_pred cceEeecCcCCH--HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHH
Confidence 567899999999 99999999999999999999999997521 3577888999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+||++||..+.. + .+.+..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.......+...+..
T Consensus 138 ~~---~g~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~ 212 (258)
T PRK07370 138 SE---GGSIVTLTYLGGVR-A-IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHV 212 (258)
T ss_pred hh---CCeEEEEecccccc-C-CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhh
Confidence 74 58999999988863 2 6888999999999999999999999999999999999999999764321111222223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++++.+|+ |+++++.||+++.++++||+++.+|||+++.
T Consensus 213 ~~~~p~~r~~~~~-dva~~~~fl~s~~~~~~tG~~i~vdgg~~~~ 256 (258)
T PRK07370 213 EEKAPLRRTVTQT-EVGNTAAFLLSDLASGITGQTIYVDAGYCIM 256 (258)
T ss_pred hhcCCcCcCCCHH-HHHHHHHHHhChhhccccCcEEEECCccccc
Confidence 3557888999998 9999999999999999999999999998764
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=238.98 Aligned_cols=193 Identities=24% Similarity=0.306 Sum_probs=165.7
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++||++|+ ++++++++++.+++|++|++|||||.... ..++.+.+.++|++++++|+.+++.+++.+.|+|++
T Consensus 61 ~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~ 138 (260)
T PRK06603 61 FVSELDVTNP--KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD 138 (260)
T ss_pred eEEEccCCCH--HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4679999999 99999999999999999999999997532 246778899999999999999999999999999963
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+|+||++||..+.. + .+.+..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.......+...+....
T Consensus 139 ---~G~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 213 (260)
T PRK06603 139 ---GGSIVTLTYYGAEK-V-IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAA 213 (260)
T ss_pred ---CceEEEEecCcccc-C-CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHh
Confidence 58999999988863 2 578899999999999999999999999999999999999999975422111112223335
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|+++++.|+ |+|++++||+++.+.++||+++.+|||+.+..
T Consensus 214 ~~p~~r~~~pe-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 256 (260)
T PRK06603 214 TAPLKRNTTQE-DVGGAAVYLFSELSKGVTGEIHYVDCGYNIMG 256 (260)
T ss_pred cCCcCCCCCHH-HHHHHHHHHhCcccccCcceEEEeCCcccccC
Confidence 67889989998 99999999999999999999999999988754
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=238.21 Aligned_cols=195 Identities=25% Similarity=0.304 Sum_probs=165.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC---CC-CCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
....++||++|. ++++++++++.+++|++|++|||||+.... .+ +.+.+.++|++++++|+.+++.+++.+.|.
T Consensus 57 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~ 134 (261)
T PRK08690 57 SELVFRCDVASD--DEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPM 134 (261)
T ss_pred CceEEECCCCCH--HHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 356799999999 999999999999999999999999985321 12 356788999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|+++ +|+||++||..+.. + .+++..|+++|+|+.+|+++++.|++++|||||.|+||+++|++.......+.....
T Consensus 135 m~~~--~g~Iv~iss~~~~~-~-~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~ 210 (261)
T PRK08690 135 MRGR--NSAIVALSYLGAVR-A-IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGH 210 (261)
T ss_pred hhhc--CcEEEEEccccccc-C-CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHH
Confidence 9754 48999999998863 2 678899999999999999999999999999999999999999976543222222222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+..|++|+.+|+ |+|+++.||+++.+.++||+++.+|||+.+.
T Consensus 211 ~~~~~p~~r~~~pe-evA~~v~~l~s~~~~~~tG~~i~vdgG~~~~ 255 (261)
T PRK08690 211 VAAHNPLRRNVTIE-EVGNTAAFLLSDLSSGITGEITYVDGGYSIN 255 (261)
T ss_pred HhhcCCCCCCCCHH-HHHHHHHHHhCcccCCcceeEEEEcCCcccc
Confidence 33557899999998 9999999999999999999999999998764
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=237.65 Aligned_cols=196 Identities=25% Similarity=0.314 Sum_probs=169.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++. ++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 57 ~~~~~~~~~Dv~~~--~~i~~~~~~~~-~~g~iD~lv~nag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~ 132 (263)
T PRK08339 57 NVDVSYIVADLTKR--EDLERTVKELK-NIGEPDIFFFSTGGP-KPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAME 132 (263)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHH-hhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 99999999985 589999999999985 557788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++ .|+||++||..+.. + .+.+..|+++|+|+.+|++++++|++++|||||+|+||+++|++......
T Consensus 133 ~~~-~g~Ii~isS~~~~~-~-~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~ 209 (263)
T PRK08339 133 RKG-FGRIIYSTSVAIKE-P-IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKS 209 (263)
T ss_pred HcC-CCEEEEEcCccccC-C-CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCC
Confidence 765 69999999998863 2 67888999999999999999999999999999999999999997543211
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...+......|++++..|+ |+|+++.||+++.+.++||+++.+|||+...
T Consensus 210 ~~~~~~~~~~~~p~~r~~~p~-dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 210 VEEALQEYAKPIPLGRLGEPE-EIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHhccCCcccCcCHH-HHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 112222333567889999998 9999999999999999999999999998654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=236.57 Aligned_cols=195 Identities=22% Similarity=0.240 Sum_probs=164.5
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC---CC-CCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QD-PLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
..+++||++|+ ++++++++++.+++|++|++|||||..... .+ +.+.+.++|++.+++|+.+++.+++.++|+|
T Consensus 58 ~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m 135 (260)
T PRK06997 58 DLVFPCDVASD--EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPML 135 (260)
T ss_pred cceeeccCCCH--HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 35789999999 999999999999999999999999985321 12 3567889999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
.+ +|+||++||..+.. + .+.+..|+++|+|+.+|+++++.|++++|||||.|+||+++|++.......+...+..
T Consensus 136 ~~---~g~Ii~iss~~~~~-~-~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~ 210 (260)
T PRK06997 136 SD---DASLLTLSYLGAER-V-VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFV 210 (260)
T ss_pred CC---CceEEEEecccccc-C-CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHH
Confidence 43 58999999988863 2 5778899999999999999999999999999999999999998754322112222223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
....|+++..+|+ |+++++.||+++.+.++||+++.+|||++....
T Consensus 211 ~~~~p~~r~~~pe-dva~~~~~l~s~~~~~itG~~i~vdgg~~~~~~ 256 (260)
T PRK06997 211 ESNAPLRRNVTIE-EVGNVAAFLLSDLASGVTGEITHVDSGFNAVVG 256 (260)
T ss_pred HhcCcccccCCHH-HHHHHHHHHhCccccCcceeEEEEcCChhhccc
Confidence 3456888988988 999999999999899999999999999887653
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=235.92 Aligned_cols=196 Identities=28% Similarity=0.340 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+... ..++.+.+.++|++.+++|+.+++.+++.++|
T Consensus 58 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (257)
T PRK08594 58 GQESLLLPCDVTSD--EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKK 135 (257)
T ss_pred CCceEEEecCCCCH--HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 45788999999999 99999999999999999999999997532 35677889999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+|.+ +|+||++||..+... .+.+..|+++|+|+++|+++++.|++++|||||+|+||+++|++.......+....
T Consensus 136 ~~~~---~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~ 210 (257)
T PRK08594 136 LMTE---GGSIVTLTYLGGERV--VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILK 210 (257)
T ss_pred hccc---CceEEEEcccCCccC--CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHH
Confidence 9964 589999999988633 57788999999999999999999999999999999999999986533211111122
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......|+++..+|+ |+|++++||+++.++++||+++.+|||+++.
T Consensus 211 ~~~~~~p~~r~~~p~-~va~~~~~l~s~~~~~~tG~~~~~dgg~~~~ 256 (257)
T PRK08594 211 EIEERAPLRRTTTQE-EVGDTAAFLFSDLSRGVTGENIHVDSGYHII 256 (257)
T ss_pred HHhhcCCccccCCHH-HHHHHHHHHcCcccccccceEEEECCchhcc
Confidence 223556888888888 9999999999999999999999999998753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=233.17 Aligned_cols=196 Identities=27% Similarity=0.368 Sum_probs=168.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|.
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (253)
T PRK05867 57 GGKVVPVCCDVSQH--QQVTSMLDQVTAELGGIDIAVCNAGII-TVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMV 133 (253)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999985 557778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+|+++||..+...........|+++|+|++++++++++|++++|||+|+|+||+++|++..... + ..+...
T Consensus 134 ~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~--~-~~~~~~ 210 (253)
T PRK05867 134 KQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT--E-YQPLWE 210 (253)
T ss_pred hcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch--H-HHHHHH
Confidence 7654589999999887532211245789999999999999999999999999999999999999875432 1 122233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.++++||+.+.+|||++.
T Consensus 211 ~~~~~~r~~~p~-~va~~~~~L~s~~~~~~tG~~i~vdgG~~~ 252 (253)
T PRK05867 211 PKIPLGRLGRPE-ELAGLYLYLASEASSYMTGSDIVIDGGYTC 252 (253)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCcccCCcCCCeEEECCCccC
Confidence 567889989998 999999999999999999999999999864
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=234.96 Aligned_cols=192 Identities=23% Similarity=0.348 Sum_probs=165.5
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++||++|. ++++++++++.+++|++|++|||||.... ..++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 62 ~~~~~~D~~~~--~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~ 139 (258)
T PRK07533 62 PIFLPLDVREP--GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT 139 (258)
T ss_pred ceEEecCcCCH--HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc
Confidence 56899999999 99999999999999999999999997522 25677889999999999999999999999999995
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+|+++||..+.. . .+.+..|+++|+|+.+|+++++.|++++|||||+|+||+++|++.......+...+...
T Consensus 140 ~---~g~Ii~iss~~~~~-~-~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 214 (258)
T PRK07533 140 N---GGSLLTMSYYGAEK-V-VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAA 214 (258)
T ss_pred c---CCEEEEEecccccc-C-CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHH
Confidence 3 58999999988763 2 57888999999999999999999999999999999999999998654322122222333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|+.++||+++.+.+++|+.+.+|||+++
T Consensus 215 ~~~p~~r~~~p~-dva~~~~~L~s~~~~~itG~~i~vdgg~~~ 256 (258)
T PRK07533 215 ERAPLRRLVDID-DVGAVAAFLASDAARRLTGNTLYIDGGYHI 256 (258)
T ss_pred hcCCcCCCCCHH-HHHHHHHHHhChhhccccCcEEeeCCcccc
Confidence 567888988888 999999999999899999999999999864
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=235.78 Aligned_cols=193 Identities=23% Similarity=0.303 Sum_probs=164.9
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
...+++|++|+ ++++++++++.+++|++|++|||||+... ..++.+.+.++|++++++|+.+++.+++.+.|+|+
T Consensus 62 ~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 139 (272)
T PRK08159 62 FVAGHCDVTDE--ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT 139 (272)
T ss_pred ceEEecCCCCH--HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 56799999999 99999999999999999999999997532 35677889999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+.. + .+.+..|+++|+|+.+|+++++.|++++|||+|+|+||+++|++...............
T Consensus 140 ~---~g~Iv~iss~~~~~-~-~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~ 214 (272)
T PRK08159 140 D---GGSILTLTYYGAEK-V-MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNE 214 (272)
T ss_pred C---CceEEEEecccccc-C-CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHH
Confidence 3 58999999987753 2 68889999999999999999999999999999999999999987543211112222222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|++++||+++.+.++||+++.+|||+.+.
T Consensus 215 ~~~p~~r~~~pe-evA~~~~~L~s~~~~~itG~~i~vdgG~~~~ 257 (272)
T PRK08159 215 YNAPLRRTVTIE-EVGDSALYLLSDLSRGVTGEVHHVDSGYHVV 257 (272)
T ss_pred hCCcccccCCHH-HHHHHHHHHhCccccCccceEEEECCCceee
Confidence 356888888887 9999999999999999999999999998754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=232.41 Aligned_cols=198 Identities=25% Similarity=0.345 Sum_probs=171.4
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.+++||++|+ +++.++++++.+.++++|++|||||.. ...+..+.+.++|++++++|+.+++.++++++|.|
T Consensus 56 ~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 132 (260)
T PRK07063 56 AGARVLAVPADVTDA--ASVAAAVAAAEEAFGPLDVLVNNAGIN-VFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGM 132 (260)
T ss_pred CCceEEEEEccCCCH--HHHHHHHHHHHHHhCCCcEEEECCCcC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 356788999999999 999999999999999999999999985 45666778899999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc----chHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERA 162 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~ 162 (219)
++++ .|+||++||..+... .++...|+++|+|+++++++++.|++++|||+|+|+||++.|++..... ..+..
T Consensus 133 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~ 209 (260)
T PRK07063 133 VERG-RGSIVNIASTHAFKI--IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAA 209 (260)
T ss_pred HhhC-CeEEEEECChhhccC--CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHH
Confidence 8765 689999999988632 5778899999999999999999999999999999999999999864321 11212
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........|++++++|+ |+|++++||+++.+.++||+++.+|||+++.
T Consensus 210 ~~~~~~~~~~~r~~~~~-~va~~~~fl~s~~~~~itG~~i~vdgg~~~~ 257 (260)
T PRK07063 210 RAETLALQPMKRIGRPE-EVAMTAVFLASDEAPFINATCITIDGGRSVL 257 (260)
T ss_pred HHHHHhcCCCCCCCCHH-HHHHHHHHHcCccccccCCcEEEECCCeeee
Confidence 22333567889999998 9999999999999999999999999998764
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=231.13 Aligned_cols=197 Identities=25% Similarity=0.358 Sum_probs=170.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 57 ~~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (254)
T PRK06114 57 GRRAIQIAADVTSK--ADLRAAVARTEAELGALTLAVNAAGIA-NANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAML 133 (254)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+....+...+..|+++|+|+++++++++.|+.++|||+|+|+||+++|++.......+. .+...
T Consensus 134 ~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~-~~~~~ 211 (254)
T PRK06114 134 ENG-GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQ-TKLFE 211 (254)
T ss_pred hcC-CcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHH-HHHHH
Confidence 765 6899999999886332223468999999999999999999999999999999999999998653211222 22333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |++++++||+++.++++||+++.+|||+..
T Consensus 212 ~~~p~~r~~~~~-dva~~~~~l~s~~~~~~tG~~i~~dgg~~~ 253 (254)
T PRK06114 212 EQTPMQRMAKVD-EMVGPAVFLLSDAASFCTGVDLLVDGGFVC 253 (254)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCcCCceEEECcCEec
Confidence 667899999998 999999999999999999999999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=231.19 Aligned_cols=200 Identities=26% Similarity=0.381 Sum_probs=173.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++++ ++++++++++.++++++|++|||||......++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~ 131 (254)
T PRK07478 54 GGEAVALAGDVRDE--AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAML 131 (254)
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 9999999999999999999999999864456778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+...+ .+++..|+++|+|+++++++++++++++||++++|+||+++|++.......+.......
T Consensus 132 ~~~-~~~iv~~sS~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 209 (254)
T PRK07478 132 ARG-GGSLIFTSTFVGHTAG-FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVA 209 (254)
T ss_pred hcC-CceEEEEechHhhccC-CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHH
Confidence 765 6899999998875222 57889999999999999999999999999999999999999998665433333333444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...|.+++.+|+ |+|+.++||+++...+++|+++.+|||+++.+
T Consensus 210 ~~~~~~~~~~~~-~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~~ 253 (254)
T PRK07478 210 GLHALKRMAQPE-EIAQAALFLASDAASFVTGTALLVDGGVSITR 253 (254)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCCCCCeEEeCCchhccC
Confidence 556788888887 99999999999988999999999999987654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=231.63 Aligned_cols=196 Identities=22% Similarity=0.285 Sum_probs=164.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC-----CCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD-----PLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
++.++.||++|+ ++++++++++.+.+|++|++|||||+. +..+ +.+.+.++|++++++|+.+++.+++.+.|
T Consensus 57 ~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~linnAg~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 133 (262)
T PRK07984 57 SDIVLPCDVAED--ASIDAMFAELGKVWPKFDGFVHSIGFA-PGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133 (262)
T ss_pred CceEeecCCCCH--HHHHHHHHHHHhhcCCCCEEEECCccC-CccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 467899999999 999999999999999999999999975 3222 55678999999999999999999999988
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.|++ +|+||++||..+. .+ .+.+..|+++|+|+++|+++++.|++++|||||+|+||+++|++...........+
T Consensus 134 ~~~~---~g~Iv~iss~~~~-~~-~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~ 208 (262)
T PRK07984 134 MLNP---GSALLTLSYLGAE-RA-IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLA 208 (262)
T ss_pred HhcC---CcEEEEEecCCCC-CC-CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHH
Confidence 6642 5899999998875 32 57888999999999999999999999999999999999999986543212122222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
......|++++..|+ |++++++||+++.+++++|+++.+|||+.+...+
T Consensus 209 ~~~~~~p~~r~~~pe-dva~~~~~L~s~~~~~itG~~i~vdgg~~~~~~~ 257 (262)
T PRK07984 209 HCEAVTPIRRTVTIE-DVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMN 257 (262)
T ss_pred HHHHcCCCcCCCCHH-HHHHHHHHHcCcccccccCcEEEECCCccccccc
Confidence 233567889999998 9999999999998999999999999998765533
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=229.52 Aligned_cols=197 Identities=23% Similarity=0.378 Sum_probs=172.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++.+++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|+
T Consensus 56 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~D~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 132 (253)
T PRK08993 56 GRRFLSLTADLRKI--DGIPALLERAVAEFGHIDILVNNAGLI-RREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFI 132 (253)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999985 556788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+||++||..+... .+....|+++|+|+++++++++.++.++||+++.|+||+++|++.......+.......
T Consensus 133 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~ 210 (253)
T PRK08993 133 AQGNGGKIINIASMLSFQG--GIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEIL 210 (253)
T ss_pred hCCCCeEEEEECchhhccC--CCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHH
Confidence 7643589999999988633 46778999999999999999999999999999999999999998765433333333334
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..|.+++..|+ |+|+.+.||+++.+++++|+++.+|||+.+
T Consensus 211 ~~~p~~r~~~p~-eva~~~~~l~s~~~~~~~G~~~~~dgg~~~ 252 (253)
T PRK08993 211 DRIPAGRWGLPS-DLMGPVVFLASSASDYINGYTIAVDGGWLA 252 (253)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEEECCCEec
Confidence 667889999998 999999999999999999999999999754
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=228.51 Aligned_cols=201 Identities=32% Similarity=0.484 Sum_probs=168.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH-hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhch-HHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI-LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA-PWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~ 85 (219)
+.++..+.||++++ ++++.+++...++ +|++|++|||||......++.+.+.++|++.+++|++| .+.+.+.+.++
T Consensus 59 ~~~~~~~~~Dv~~~--~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~ 136 (270)
T KOG0725|consen 59 GGKVLAIVCDVSKE--VDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPM 136 (270)
T ss_pred CCeeEEEECcCCCH--HHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHH
Confidence 56799999999999 9999999999999 79999999999987555589999999999999999995 66666777777
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCc-chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch---HH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ER 161 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~ 161 (219)
+++++ +|.|+++||..+.... .+. .+|+++|+|+++|+|+++.||+++|||+|+|.||.+.|++....... +.
T Consensus 137 ~~~~~-gg~I~~~ss~~~~~~~--~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~ 213 (270)
T KOG0725|consen 137 LKKSK-GGSIVNISSVAGVGPG--PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEE 213 (270)
T ss_pred HHhcC-CceEEEEeccccccCC--CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhH
Confidence 76655 8999999999887443 333 79999999999999999999999999999999999999982211111 22
Q ss_pred HHHH--HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 162 AVKL--VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 162 ~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
..+. .....|+++.+.|+ |+++.+.||+++++++++|+.+.+|||++...+.
T Consensus 214 ~~~~~~~~~~~p~gr~g~~~-eva~~~~fla~~~asyitG~~i~vdgG~~~~~~~ 267 (270)
T KOG0725|consen 214 FKEATDSKGAVPLGRVGTPE-EVAEAAAFLASDDASYITGQTIIVDGGFTVVGPS 267 (270)
T ss_pred HhhhhccccccccCCccCHH-HHHHhHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence 2222 33456899999998 9999999999998889999999999999887643
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=230.93 Aligned_cols=196 Identities=23% Similarity=0.285 Sum_probs=163.2
Q ss_pred eEEEEecC--Cccc----------------hhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhh
Q 027744 11 VEVVGLDM--EEDR----------------EGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKIN 71 (219)
Q Consensus 11 ~~~~~~Dl--~~~~----------------~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n 71 (219)
...+++|+ ++.+ +++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|
T Consensus 74 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN 153 (303)
T PLN02730 74 TKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISAS 153 (303)
T ss_pred CeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHH
Confidence 56889999 5441 13899999999999999999999998632 23688899999999999999
Q ss_pred hchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCc-chhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCcc
Q 027744 72 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHL 149 (219)
Q Consensus 72 ~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~-~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~ 149 (219)
+.+++.++|.++|+|++ .|+||++||..+.. + .+++ ..|+++|+|+++|+++++.|+++ +|||+|+|+||+++
T Consensus 154 ~~~~~~l~~~~~p~m~~---~G~II~isS~a~~~-~-~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~ 228 (303)
T PLN02730 154 SYSFVSLLQHFGPIMNP---GGASISLTYIASER-I-IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG 228 (303)
T ss_pred hHHHHHHHHHHHHHHhc---CCEEEEEechhhcC-C-CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence 99999999999999975 48999999998863 2 4544 58999999999999999999986 79999999999999
Q ss_pred CCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
|++.......+..........|++++..|+ |++++++||+|+.+.+++|+++.+|||++...
T Consensus 229 T~~~~~~~~~~~~~~~~~~~~pl~r~~~pe-evA~~~~fLaS~~a~~itG~~l~vdGG~~~~g 290 (303)
T PLN02730 229 SRAAKAIGFIDDMIEYSYANAPLQKELTAD-EVGNAAAFLASPLASAITGATIYVDNGLNAMG 290 (303)
T ss_pred CchhhcccccHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence 998764211222222233445778888887 99999999999999999999999999987764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=229.56 Aligned_cols=193 Identities=26% Similarity=0.258 Sum_probs=163.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++++++||++|+ ++++++++++.+.+|++|++|||||+... ..++.+.++++|++++++|+.+++.+++.++|+|
T Consensus 58 ~~~~~~~Dv~~~--~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m 135 (256)
T PRK07889 58 PAPVLELDVTNE--EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLM 135 (256)
T ss_pred CCcEEeCCCCCH--HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 577899999999 99999999999999999999999998522 1356778899999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+|+++++... .+ .+.+..|+++|+|+.+|+++++.|++++|||+|+|+||+++|++..............
T Consensus 136 ~~---~g~Iv~is~~~~--~~-~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 209 (256)
T PRK07889 136 NE---GGSIVGLDFDAT--VA-WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGW 209 (256)
T ss_pred cc---CceEEEEeeccc--cc-CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHH
Confidence 73 589999987543 22 5778889999999999999999999999999999999999999865432222222333
Q ss_pred HhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++ ++.+|+ |+|+.++||+++.+.+++|+++.+|||++..
T Consensus 210 ~~~~p~~~~~~~p~-evA~~v~~l~s~~~~~~tG~~i~vdgg~~~~ 254 (256)
T PRK07889 210 DERAPLGWDVKDPT-PVARAVVALLSDWFPATTGEIVHVDGGAHAM 254 (256)
T ss_pred HhcCccccccCCHH-HHHHHHHHHhCcccccccceEEEEcCceecc
Confidence 3556777 578887 9999999999998999999999999998754
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=228.13 Aligned_cols=199 Identities=24% Similarity=0.297 Sum_probs=168.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.+++++++|++|. ++++++++++.+.++++|++|||||... ...++.+.+.++|.+.+++|+.+++.+++.+++.|.
T Consensus 48 ~~~~~~~~Dv~d~--~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~ 125 (259)
T PRK08340 48 GEVYAVKADLSDK--DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWL 125 (259)
T ss_pred CCceEEEcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 3688999999999 9999999999999999999999999742 234577888999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+....|+||++||..+..+ .++...|+++|+|+.+++++++.+++++|||+++|+||+++|++......
T Consensus 126 ~~~~~g~iv~isS~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~ 203 (259)
T PRK08340 126 EKKMKGVLVYLSSVSVKEP--MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVS 203 (259)
T ss_pred hcCCCCEEEEEeCcccCCC--CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCc
Confidence 5433689999999988632 57788999999999999999999999999999999999999998643211
Q ss_pred -hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 159 -QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
++..........|++|++.|+ |+|+++.||+++.++++||+++.+|||+..-.
T Consensus 204 ~~~~~~~~~~~~~p~~r~~~p~-dva~~~~fL~s~~~~~itG~~i~vdgg~~~~~ 257 (259)
T PRK08340 204 FEETWEREVLERTPLKRTGRWE-ELGSLIAFLLSENAEYMLGSTIVFDGAMTRGV 257 (259)
T ss_pred hHHHHHHHHhccCCccCCCCHH-HHHHHHHHHcCcccccccCceEeecCCcCCCC
Confidence 111122233567889999998 99999999999999999999999999986543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=230.68 Aligned_cols=195 Identities=23% Similarity=0.283 Sum_probs=168.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.++++++.+.+|++|++|||||......++.+.++++|++++++|+.+++.+++++.|+|+
T Consensus 99 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 176 (294)
T PRK07985 99 GRKAVLLPGDLSDE--KFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP 176 (294)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 45688999999999 9999999999999999999999999753456788899999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... .+....|+++|+|+++++++++.|++++|||+|+|+||++.|++.......+.......
T Consensus 177 ~---~g~iv~iSS~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~ 251 (294)
T PRK07985 177 K---GASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFG 251 (294)
T ss_pred c---CCEEEEECCchhccC--CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHh
Confidence 4 589999999988733 57788999999999999999999999999999999999999998532211222222333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++..|+ |+|++++||+++.+.+++|+++.+|||+++
T Consensus 252 ~~~~~~r~~~pe-dva~~~~fL~s~~~~~itG~~i~vdgG~~~ 293 (294)
T PRK07985 252 QQTPMKRAGQPA-ELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_pred ccCCCCCCCCHH-HHHHHHHhhhChhcCCccccEEeeCCCeeC
Confidence 567888989998 999999999999999999999999999864
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=227.90 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=170.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-----CCCCCCCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
+.+++++++|++|+ ++++++++++.+.++++|++|||||..+ ...++.+.+.++|++.+++|+.+++.+++.+
T Consensus 58 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 135 (260)
T PRK08416 58 GIKAKAYPLNILEP--ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEA 135 (260)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999998642 2346677888999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 83 ~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+|.|++.+ .|+||++||..+... .+.+..|+++|+|+++++++++.|++++||||++|+||+++|++.......+..
T Consensus 136 ~~~~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~ 212 (260)
T PRK08416 136 AKRMEKVG-GGSIISLSSTGNLVY--IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEV 212 (260)
T ss_pred HHhhhccC-CEEEEEEeccccccC--CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHH
Confidence 99998765 689999999887533 578889999999999999999999999999999999999999986543333333
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+......|++++.+|+ |+|++++||+++...+++|+.+.+|||+++
T Consensus 213 ~~~~~~~~~~~r~~~p~-~va~~~~~l~~~~~~~~~G~~i~vdgg~~~ 259 (260)
T PRK08416 213 KAKTEELSPLNRMGQPE-DLAGACLFLCSEKASWLTGQTIVVDGGTTF 259 (260)
T ss_pred HHHHHhcCCCCCCCCHH-HHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence 34444567888888998 999999999999889999999999999864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=224.42 Aligned_cols=200 Identities=22% Similarity=0.278 Sum_probs=171.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.+++||++|+ ++++++++++.++++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|+++
T Consensus 45 ~~~~~~~D~~~~--~~i~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (258)
T PRK06398 45 DVDYFKVDVSNK--EQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ 121 (258)
T ss_pred ceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 578999999999 999999999999999999999999985 66788889999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------hHHH-
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERA- 162 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~~- 162 (219)
+ .|+||++||..+..+ .+++..|+++|+|+++++++++.|+.+. |++|+|+||+++|++...... .+..
T Consensus 122 ~-~g~iv~isS~~~~~~--~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~ 197 (258)
T PRK06398 122 D-KGVIINIASVQSFAV--TRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVE 197 (258)
T ss_pred C-CeEEEEeCcchhccC--CCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhH
Confidence 5 699999999988633 5788999999999999999999999876 999999999999997643210 1111
Q ss_pred --HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCccc
Q 027744 163 --VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRS 217 (219)
Q Consensus 163 --~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~ 217 (219)
........|++++.+|+ |+|++++||+++.+.+++|+++.+|||++...|+-.+
T Consensus 198 ~~~~~~~~~~~~~~~~~p~-eva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~ 253 (258)
T PRK06398 198 RKIREWGEMHPMKRVGKPE-EVAYVVAFLASDLASFITGECVTVDGGLRALIPLSTP 253 (258)
T ss_pred HHHHhhhhcCCcCCCcCHH-HHHHHHHHHcCcccCCCCCcEEEECCccccCCCCCCC
Confidence 11222456888888988 9999999999998999999999999999877665443
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=225.65 Aligned_cols=197 Identities=22% Similarity=0.324 Sum_probs=168.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ +++..+++++.+.+|++|++|||||......++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 53 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 130 (272)
T PRK08589 53 GGKAKAYHVDISDE--QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMM 130 (272)
T ss_pred CCeEEEEEeecCCH--HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999999864446777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--HH----
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ER---- 161 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~---- 161 (219)
++ +|+||++||..+..+ .+....|+++|+|+++|++++++|+.++||++|+|+||+++|++....... ..
T Consensus 131 ~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 206 (272)
T PRK08589 131 EQ--GGSIINTSSFSGQAA--DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKT 206 (272)
T ss_pred Hc--CCEEEEeCchhhcCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHH
Confidence 75 489999999988633 567889999999999999999999999999999999999999986543221 11
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.........|++++.+|+ |+|+++.+|+++..++++|+++.+|||+...
T Consensus 207 ~~~~~~~~~~~~~~~~~~-~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~ 255 (272)
T PRK08589 207 FRENQKWMTPLGRLGKPE-EVAKLVVFLASDDSSFITGETIRIDGGVMAY 255 (272)
T ss_pred HhhhhhccCCCCCCcCHH-HHHHHHHHHcCchhcCcCCCEEEECCCcccC
Confidence 111111345788888887 9999999999998999999999999998654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=222.91 Aligned_cols=196 Identities=22% Similarity=0.412 Sum_probs=172.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.+.|.
T Consensus 57 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (254)
T PRK08085 57 GIKAHAAPFNVTHK--QEVEAAIEHIEKDIGPIDVLINNAGIQ-RRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV 133 (254)
T ss_pred CCeEEEEecCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45688899999999 999999999999999999999999985 556788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+.. + .++...|+++|+++++++++++++++++||++|+|+||+++|++.......+.......
T Consensus 134 ~~~-~~~iv~isS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~ 210 (254)
T PRK08085 134 KRQ-AGKIINICSMQSEL-G-RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLC 210 (254)
T ss_pred HcC-CcEEEEEccchhcc-C-CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHH
Confidence 765 68999999988763 3 57788999999999999999999999999999999999999998765433333334444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++++|+ |+|+++.||+++.++++||+.+.+|||+..
T Consensus 211 ~~~p~~~~~~~~-~va~~~~~l~~~~~~~i~G~~i~~dgg~~~ 252 (254)
T PRK08085 211 KRTPAARWGDPQ-ELIGAAVFLSSKASDFVNGHLLFVDGGMLV 252 (254)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCCcCCEEEECCCeee
Confidence 667889999988 999999999999999999999999999754
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=228.48 Aligned_cols=195 Identities=23% Similarity=0.310 Sum_probs=169.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||+++. ++++++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++.+++.++++|+
T Consensus 105 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 182 (300)
T PRK06128 105 GRKAVALPGDLKDE--AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP 182 (300)
T ss_pred CCeEEEEecCCCCH--HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC
Confidence 45788999999999 9999999999999999999999999754456788899999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +++||++||..++.. .+.+..|+++|+|+++|++++++++.++||++++|+||++.|++.......+...+.+.
T Consensus 183 ~---~~~iv~~sS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~ 257 (300)
T PRK06128 183 P---GASIINTGSIQSYQP--SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFG 257 (300)
T ss_pred c---CCEEEEECCccccCC--CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHh
Confidence 4 579999999988733 57788999999999999999999999999999999999999998643221222223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|+++++.|+ |+|.++++|+++.+.+++|+++.+|||+.+
T Consensus 258 ~~~p~~r~~~p~-dva~~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 258 SETPMKRPGQPV-EMAPLYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred cCCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence 567889999998 999999999999889999999999999865
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=222.65 Aligned_cols=196 Identities=22% Similarity=0.355 Sum_probs=171.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||+++. +++.++++++.+.+|++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 62 ~~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (258)
T PRK06935 62 GRKVTFVQVDLTKP--ESAEKVVKEALEEFGKIDILVNNAGTI-RRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMA 138 (258)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .+.+..|+++|+|++++++++++|+.++|||+|.|+||+++|++.......+.......
T Consensus 139 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 215 (258)
T PRK06935 139 KQG-SGKIINIASMLSFQG--GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL 215 (258)
T ss_pred hcC-CeEEEEECCHHhccC--CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHH
Confidence 865 689999999988633 57788999999999999999999999999999999999999998654333222222333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|.+++..|+ |+++++.||+++.+++++|+++.+|||+.+
T Consensus 216 ~~~~~~~~~~~~-dva~~~~~l~s~~~~~~~G~~i~~dgg~~~ 257 (258)
T PRK06935 216 KRIPAGRWGEPD-DLMGAAVFLASRASDYVNGHILAVDGGWLV 257 (258)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcChhhcCCCCCEEEECCCeec
Confidence 567888999998 999999999999999999999999999754
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=224.50 Aligned_cols=196 Identities=20% Similarity=0.259 Sum_probs=169.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 58 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 134 (265)
T PRK07062 58 GARLLAARCDVLDE--ADVAAFAAAVEARFGGVDMLVNNAGQG-RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLR 134 (265)
T ss_pred CceEEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45788999999999 999999999999999999999999985 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----hHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~ 162 (219)
+++ .|+||++||..+... .+....|+++|+|+.+++++++.|+.++||++++|+||+++|++...... ....
T Consensus 135 ~~~-~g~iv~isS~~~~~~--~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 211 (265)
T PRK07062 135 ASA-AASIVCVNSLLALQP--EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSW 211 (265)
T ss_pred ccC-CcEEEEeccccccCC--CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCCh
Confidence 765 689999999988633 57788999999999999999999999999999999999999997543211 0001
Q ss_pred HHHH-----HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLV-----REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~-----~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.... ....|++++.+|+ |+|++++||+++.+.++||+++.+|||+..
T Consensus 212 ~~~~~~~~~~~~~p~~r~~~p~-~va~~~~~L~s~~~~~~tG~~i~vdgg~~~ 263 (265)
T PRK07062 212 EAWTAALARKKGIPLGRLGRPD-EAARALFFLASPLSSYTTGSHIDVSGGFAR 263 (265)
T ss_pred HHHHHHHhhcCCCCcCCCCCHH-HHHHHHHHHhCchhcccccceEEEcCceEe
Confidence 1111 1346888989998 999999999999889999999999999754
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=220.52 Aligned_cols=194 Identities=22% Similarity=0.317 Sum_probs=164.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH----hC--CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI----LG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~----~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.++..+.+|+++. +++..+++++.+. ++ ++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ 129 (252)
T PRK12747 53 GGSAFSIGANLESL--HGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQ 129 (252)
T ss_pred CCceEEEecccCCH--HHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence 44678899999999 8999999888763 34 899999999985 556788889999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 82 ~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
++|.|++ .|+||++||..+... .++...|+++|+|+++++++++.|+.++|||+|+|+||++.|++.......+.
T Consensus 130 ~~~~~~~---~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~ 204 (252)
T PRK12747 130 ALSRLRD---NSRIINISSAATRIS--LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM 204 (252)
T ss_pred HHHHhhc---CCeEEEECCcccccC--CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH
Confidence 9999975 489999999998733 57788999999999999999999999999999999999999998654333333
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.........+++++..|+ |+|+++.||+++...+++|+.+.+|||+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~~~G~~i~vdgg~~~ 252 (252)
T PRK12747 205 MKQYATTISAFNRLGEVE-DIADTAAFLASPDSRWVTGQLIDVSGGSCL 252 (252)
T ss_pred HHHHHHhcCcccCCCCHH-HHHHHHHHHcCccccCcCCcEEEecCCccC
Confidence 333332334678888888 999999999999889999999999999753
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=223.04 Aligned_cols=199 Identities=21% Similarity=0.332 Sum_probs=170.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC--------------CCCCCcCHHHHHHHHHhhhc
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--------------QDPLQVGEDEFKKLVKINFV 73 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~--------------~~~~~~~~~~~~~~~~~n~~ 73 (219)
+.++.++++|++++ +++..+++++.+.++++|++|||||...+. .++.+.+.++|++.+++|+.
T Consensus 58 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 135 (278)
T PRK08277 58 GGEALAVKADVLDK--ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLL 135 (278)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhH
Confidence 45788999999999 999999999999999999999999964221 34667889999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 74 ~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+++.+++.+++.|++++ .|+||++||..+..+ .++...|+++|+|+++++++++.++.++|||+|+|.||++.|++.
T Consensus 136 ~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~ 212 (278)
T PRK08277 136 GTLLPTQVFAKDMVGRK-GGNIINISSMNAFTP--LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN 212 (278)
T ss_pred HHHHHHHHHHHHHHhcC-CcEEEEEccchhcCC--CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence 99999999999998765 689999999988733 578899999999999999999999999999999999999999975
Q ss_pred ccccch-----HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCccccC
Q 027744 154 PIAVGQ-----ERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 154 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~~ 212 (219)
...... ....+......|++++++|+ |+|++++||+++ .+.++||+++.+|||+..+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~ 276 (278)
T PRK08277 213 RALLFNEDGSLTERANKILAHTPMGRFGKPE-ELLGTLLWLADEKASSFVTGVVLPVDGGFSAYS 276 (278)
T ss_pred hhhhccccccchhHHHHHhccCCccCCCCHH-HHHHHHHHHcCccccCCcCCCEEEECCCeeccc
Confidence 432211 12222333567889999998 999999999999 89999999999999987764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=226.48 Aligned_cols=182 Identities=23% Similarity=0.315 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccc
Q 027744 25 AFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG 103 (219)
Q Consensus 25 ~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~ 103 (219)
+++++++++.+++|++|++|||||... ...++.+.+.++|++++++|+.++++++++++|+|++ +|+|++++|..+
T Consensus 105 si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~---~G~ii~iss~~~ 181 (299)
T PRK06300 105 TISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP---GGSTISLTYLAS 181 (299)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCeEEEEeehhh
Confidence 689999999999999999999998642 2578889999999999999999999999999999975 478999999888
Q ss_pred cccCCCCCcc-hhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchh
Q 027744 104 AERGLYPGAA-AYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181 (219)
Q Consensus 104 ~~~~~~~~~~-~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 181 (219)
. .+ .+.+. .|+++|+|+.+|+++++.|+++ +|||+|+|+||++.|++.......+..........|+++...|+ |
T Consensus 182 ~-~~-~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-e 258 (299)
T PRK06300 182 M-RA-VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAE-Q 258 (299)
T ss_pred c-Cc-CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHH-H
Confidence 6 33 46554 8999999999999999999987 59999999999999998653221122223333556888888887 9
Q ss_pred HHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 182 LASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 182 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
+++.++||+++.+.++||+++.+|||++...
T Consensus 259 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 289 (299)
T PRK06300 259 VGAAAAFLVSPLASAITGETLYVDHGANVMG 289 (299)
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCcceec
Confidence 9999999999989999999999999998764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=220.05 Aligned_cols=198 Identities=27% Similarity=0.370 Sum_probs=167.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ +++.++++++.+.++++|++|||||.. .... .+.+.++|++.+++|+.+++.+++.+.++|+
T Consensus 51 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (261)
T PRK08265 51 GERARFIATDITDD--AAIERAVATVVARFGRVDILVNLACTY-LDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA 126 (261)
T ss_pred CCeeEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh
Confidence 34688999999999 999999999999999999999999975 3233 3568899999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--HHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~ 165 (219)
++ +|+||++||..+... .+.+..|+++|+++++++++++.|+.++|||+|+|+||++.|++....... +.....
T Consensus 127 -~~-~g~ii~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~ 202 (261)
T PRK08265 127 -RG-GGAIVNFTSISAKFA--QTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRV 202 (261)
T ss_pred -cC-CcEEEEECchhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHh
Confidence 43 689999999988633 577889999999999999999999999999999999999999986543221 111112
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
.....|++++.+|+ |+|++++||+++...+++|+.+.+|||+++..+.
T Consensus 203 ~~~~~p~~r~~~p~-dva~~~~~l~s~~~~~~tG~~i~vdgg~~~~~~~ 250 (261)
T PRK08265 203 AAPFHLLGRVGDPE-EVAQVVAFLCSDAASFVTGADYAVDGGYSALGPE 250 (261)
T ss_pred hcccCCCCCccCHH-HHHHHHHHHcCccccCccCcEEEECCCeeccCCC
Confidence 22345788888888 9999999999998999999999999999877644
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=219.44 Aligned_cols=195 Identities=27% Similarity=0.337 Sum_probs=168.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+++
T Consensus 52 ~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 128 (255)
T PRK06463 52 GVFTIKCDVGNR--DQVKKSKEVVEKEFGRVDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS 128 (255)
T ss_pred CCeEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 467899999999 999999999999999999999999985 55677888999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch---HHHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLV 166 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~ 166 (219)
+ .|+||++||..+... +.++...|+++|+|+++|+++++.|+++.||+++.|+||+++|++....... .......
T Consensus 129 ~-~g~iv~isS~~~~~~-~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~ 206 (255)
T PRK06463 129 K-NGAIVNIASNAGIGT-AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELF 206 (255)
T ss_pred C-CcEEEEEcCHHhCCC-CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHH
Confidence 5 689999999887622 2467788999999999999999999999999999999999999986432221 1222333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....+++++.+|+ |+|+.+++|+++.+.+++|+.+.+|||..-
T Consensus 207 ~~~~~~~~~~~~~-~va~~~~~l~s~~~~~~~G~~~~~dgg~~~ 249 (255)
T PRK06463 207 RNKTVLKTTGKPE-DIANIVLFLASDDARYITGQVIVADGGRID 249 (255)
T ss_pred HhCCCcCCCcCHH-HHHHHHHHHcChhhcCCCCCEEEECCCeee
Confidence 4567888888888 999999999999889999999999999853
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=217.98 Aligned_cols=189 Identities=25% Similarity=0.294 Sum_probs=167.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++.++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+.+.++|.|+
T Consensus 67 g~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 143 (256)
T PRK12859 67 GVKVSSMELDLTQN--DAPKELLNKVTEQLGYPHILVNNAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFD 143 (256)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 45788999999999 999999999999999999999999985 557888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+..+ .+++..|+++|+++++|+++++++++++||+++.|+||+++|++... ...+...
T Consensus 144 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~ 215 (256)
T PRK12859 144 KKS-GGRIINMTSGQFQGP--MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLL 215 (256)
T ss_pred hcC-CeEEEEEcccccCCC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHH
Confidence 765 689999999988632 57889999999999999999999999999999999999999986542 1222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...|+++...|+ |+|+.+.+|+++.+.+++|+++.+|||+
T Consensus 216 ~~~~~~~~~~~~-d~a~~~~~l~s~~~~~~~G~~i~~dgg~ 255 (256)
T PRK12859 216 PMFPFGRIGEPK-DAARLIKFLASEEAEWITGQIIHSEGGF 255 (256)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEEeCCCc
Confidence 556777778887 9999999999998999999999999995
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=221.39 Aligned_cols=198 Identities=27% Similarity=0.307 Sum_probs=166.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHH----HHHHHHhhhchHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE----FKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.++.++++|+++. ++++.+++++.+.++++|++|||||+.....++.+.+.++ |++++++|+.+++.+++.++|
T Consensus 52 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 52 DHVLVVEGDVTSY--ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred CcceEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 4678899999999 9999999999999999999999999853345666666665 899999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-------
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------- 157 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~------- 157 (219)
.|+++ +|+||+++|..+..+ .++...|+++|+|+++|+++++.++++. ||||+|+||++.|++.....
T Consensus 130 ~~~~~--~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~ 204 (263)
T PRK06200 130 ALKAS--GGSMIFTLSNSSFYP--GGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETS 204 (263)
T ss_pred HHHhc--CCEEEEECChhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcc
Confidence 98764 489999999988633 4677899999999999999999999884 99999999999999754210
Q ss_pred --chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCccccCCC
Q 027744 158 --GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 158 --~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~~~~ 214 (219)
..+...+......|+++..+|+ |+|++++||+++. +.++||+++.+|||+.+..++
T Consensus 205 ~~~~~~~~~~~~~~~p~~r~~~~~-eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~~ 263 (263)
T PRK06200 205 ISDSPGLADMIAAITPLQFAPQPE-DHTGPYVLLASRRNSRALTGVVINADGGLGIRGIR 263 (263)
T ss_pred cccccchhHHhhcCCCCCCCCCHH-HHhhhhhheecccccCcccceEEEEcCceeecccC
Confidence 0111223334567899999998 9999999999998 999999999999998876653
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=217.59 Aligned_cols=194 Identities=24% Similarity=0.349 Sum_probs=170.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++++ ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 68 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 144 (262)
T PRK07831 68 LGRVEAVVCDVTSE--AQVDALIDAAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMR 144 (262)
T ss_pred CceEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999985 557788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
.+...|+|++++|..+... .+++..|+++|+|+++++++++.|++++|||+++|+||++.|++.......+.... ..
T Consensus 145 ~~~~~g~iv~~ss~~~~~~--~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~-~~ 221 (262)
T PRK07831 145 ARGHGGVIVNNASVLGWRA--QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE-LA 221 (262)
T ss_pred hcCCCcEEEEeCchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH-HH
Confidence 7643589999999888633 57888999999999999999999999999999999999999998765433333333 33
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+++++..|+ |+|+.++||+++.+.++||+++.+|+|+
T Consensus 222 ~~~~~~r~~~p~-~va~~~~~l~s~~~~~itG~~i~v~~~~ 261 (262)
T PRK07831 222 AREAFGRAAEPW-EVANVIAFLASDYSSYLTGEVVSVSSQH 261 (262)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCcCCceEEeCCCC
Confidence 567888988888 9999999999999999999999999975
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=216.39 Aligned_cols=196 Identities=23% Similarity=0.364 Sum_probs=169.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++..+++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++++.|+
T Consensus 51 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 127 (248)
T TIGR01832 51 GRRFLSLTADLSDI--EAIKALVDSAVEEFGHIDILVNNAGII-RRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFL 127 (248)
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999986 556777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++..|+||++||..+..+ .+....|+++|++++++++++++++.++||++++++||++.|++...............
T Consensus 128 ~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 205 (248)
T TIGR01832 128 KQGRGGKIINIASMLSFQG--GIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAIL 205 (248)
T ss_pred hcCCCeEEEEEecHHhccC--CCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHH
Confidence 7543589999999988633 46788999999999999999999999999999999999999998654332222222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|.+++.+|+ |+|+++.+|+++...+++|+++.+|||+.
T Consensus 206 ~~~~~~~~~~~~-dva~~~~~l~s~~~~~~~G~~i~~dgg~~ 246 (248)
T TIGR01832 206 ERIPAGRWGTPD-DIGGPAVFLASSASDYVNGYTLAVDGGWL 246 (248)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence 557888889988 99999999999989999999999999975
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=216.81 Aligned_cols=198 Identities=19% Similarity=0.291 Sum_probs=172.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 56 ~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~ 132 (261)
T PRK08936 56 GGEAIAVKGDVTVE--SDVVNLIQTAVKEFGTLDVMINNAGIE-NAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFV 132 (261)
T ss_pred CCeEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+..|+||++||..+. .+ .+++..|+++|+|++++++.++.++.++||+++.|+||+++|++.......+.......
T Consensus 133 ~~~~~g~iv~~sS~~~~-~~-~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 210 (261)
T PRK08936 133 EHDIKGNIINMSSVHEQ-IP-WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVE 210 (261)
T ss_pred hcCCCcEEEEEcccccc-CC-CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHH
Confidence 76545899999998876 32 67889999999999999999999999999999999999999998654333332223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+++ |+++.+.||+++...+++|+.+.+|||+.++
T Consensus 211 ~~~~~~~~~~~~-~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~ 253 (261)
T PRK08936 211 SMIPMGYIGKPE-EIAAVAAWLASSEASYVTGITLFADGGMTLY 253 (261)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCcccCCccCcEEEECCCcccC
Confidence 566888888888 9999999999999999999999999998744
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=216.21 Aligned_cols=203 Identities=28% Similarity=0.392 Sum_probs=175.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++.++|.
T Consensus 51 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 127 (256)
T PRK12743 51 GVRAEIRQLDLSDL--PEGAQALDKLIQRLGRIDVLVNNAGAM-TKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMV 127 (256)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 446677889999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+||++||..+..+ .++...|+++|+++++++++++.++.++||+++.|+||+++|++..... . .......
T Consensus 128 ~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~-~~~~~~~ 203 (256)
T PRK12743 128 KQGQGGRIINITSVHEHTP--LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD-S-DVKPDSR 203 (256)
T ss_pred hcCCCeEEEEEeeccccCC--CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC-h-HHHHHHH
Confidence 7543589999999887633 5788999999999999999999999999999999999999999865422 2 2222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCcccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSY 218 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~~ 218 (219)
...++++..+|+ |+++++.+|+++...+++|+.+.+|||+.++.|+-.+-
T Consensus 204 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~ 253 (256)
T PRK12743 204 PGIPLGRPGDTH-EIASLVAWLCSEGASYTTGQSLIVDGGFMLANPQFNSE 253 (256)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCccccCcCCcEEEECCCccccCCccccc
Confidence 556778888887 99999999999988999999999999999888876553
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=216.91 Aligned_cols=197 Identities=27% Similarity=0.386 Sum_probs=171.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++..+++++.+.+|++|++|||+|......++.+.+.++|++++++|+.+++.+++.++|.|.
T Consensus 55 ~~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (253)
T PRK06172 55 GGEALFVACDVTRD--AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLML 132 (253)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45689999999999 9999999999999999999999999854445577889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~ 166 (219)
+++ .++|+++||..+... .+++..|+++|+|+++++++++.++.++||++++|+||.++|++...... .+......
T Consensus 133 ~~~-~~~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 209 (253)
T PRK06172 133 AQG-GGAIVNTASVAGLGA--APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFA 209 (253)
T ss_pred hcC-CcEEEEECchhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHH
Confidence 765 689999999988633 68889999999999999999999999999999999999999998765432 23333334
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|+++..+|+ |+++.++||+++...+++|++|.+|||+++
T Consensus 210 ~~~~~~~~~~~p~-~ia~~~~~l~~~~~~~~~G~~i~~dgg~~~ 252 (253)
T PRK06172 210 AAMHPVGRIGKVE-EVASAVLYLCSDGASFTTGHALMVDGGATA 252 (253)
T ss_pred hccCCCCCccCHH-HHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence 4667888888888 999999999999899999999999999854
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=217.21 Aligned_cols=197 Identities=24% Similarity=0.413 Sum_probs=173.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++.+++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+.+.|+
T Consensus 58 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (255)
T PRK07523 58 GLSAHALAFDVTDH--DAVRAAIDAFEAEIGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMI 134 (255)
T ss_pred CceEEEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35688999999999 999999999999999999999999985 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .+++..|+++|++++++++.++.+++++||++++|+||++.|++.......+.......
T Consensus 135 ~~~-~g~iv~iss~~~~~~--~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 211 (255)
T PRK07523 135 ARG-AGKIINIASVQSALA--RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLE 211 (255)
T ss_pred HhC-CeEEEEEccchhccC--CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHH
Confidence 765 689999999887633 57889999999999999999999999999999999999999998765443333444444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++..|+ |+|+++++|+++.+.+++|+.+.+|||+.++
T Consensus 212 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 212 KRTPAGRWGKVE-ELVGACVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence 667888999988 9999999999998899999999999998654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=216.01 Aligned_cols=197 Identities=28% Similarity=0.441 Sum_probs=170.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++++ ++++++++++.+.++++|++|||||.. +..++.+.+.++|++++++|+.+++.+++.+.+.|.
T Consensus 46 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 122 (252)
T PRK07856 46 GRPAEFHAADVRDP--DQVAALVDAIVERHGRLDVLVNNAGGS-PYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQ 122 (252)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++...|+||++||..+..+ .+.+..|+++|+++++|++.++.|+.++ |+++.|+||+++|++.......+.......
T Consensus 123 ~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 199 (252)
T PRK07856 123 QQPGGGSIVNIGSVSGRRP--SPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVA 199 (252)
T ss_pred hcCCCcEEEEEcccccCCC--CCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHh
Confidence 7543589999999988633 5788999999999999999999999988 999999999999997654333322223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|+++..+|+ |+|+++++|+++..+++||+.+.+|||+..+
T Consensus 200 ~~~~~~~~~~p~-~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 200 ATVPLGRLATPA-DIAWACLFLASDLASYVSGANLEVHGGGERP 242 (252)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence 567888888888 9999999999998899999999999998765
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=216.49 Aligned_cols=197 Identities=25% Similarity=0.315 Sum_probs=169.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++++ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 50 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (256)
T PRK08643 50 GGKAIAVKADVSDR--DQVFAAVRQVVDTFGDLNVVVNNAGVA-PTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFK 126 (256)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35688899999999 999999999999999999999999985 567788889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+.+.+++||++||..+... .++...|+++|++++.+++.++.++.++||++++|+||++.|++......
T Consensus 127 ~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 204 (256)
T PRK08643 127 KLGHGGKIINATSQAGVVG--NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKP 204 (256)
T ss_pred hcCCCCEEEEECccccccC--CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCC
Confidence 7653589999999988633 57788999999999999999999999999999999999999998654211
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.......+....+.+++.+|+ |+|+++.||+++.+.++||+++.+|||+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-~va~~~~~L~~~~~~~~~G~~i~vdgg~~~ 255 (256)
T PRK08643 205 DEWGMEQFAKDITLGRLSEPE-DVANCVSFLAGPDSDYITGQTIIVDGGMVF 255 (256)
T ss_pred chHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEEeCCCeec
Confidence 111112233456788888887 999999999999999999999999999875
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=208.80 Aligned_cols=178 Identities=22% Similarity=0.276 Sum_probs=154.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
+++.++..||+|. ++++.+++.+.++++++|+||||||.. ...++.+.+.++|++|+++|+.|.++.+++++|.|.+
T Consensus 53 ~~~~~~~~DVtD~--~~~~~~i~~~~~~~g~iDiLvNNAGl~-~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~ 129 (246)
T COG4221 53 GAALALALDVTDR--AAVEAAIEALPEEFGRIDILVNNAGLA-LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVE 129 (246)
T ss_pred CceEEEeeccCCH--HHHHHHHHHHHHhhCcccEEEecCCCC-cCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 6799999999999 999999999999999999999999997 6699999999999999999999999999999999999
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+|||+||++|..+ +++...||++|+++..|++.|++|+..++||+..|.||.+.|+.+......++..... +
T Consensus 130 r~-~G~IiN~~SiAG~~~--y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~-~ 205 (246)
T COG4221 130 RK-SGHIINLGSIAGRYP--YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERAD-K 205 (246)
T ss_pred cC-CceEEEecccccccc--CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHH-H
Confidence 87 789999999999744 7999999999999999999999999999999999999999888766655443222222 1
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGS 194 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~ 194 (219)
...-....+|+ |+|+++.|.++...
T Consensus 206 ~y~~~~~l~p~-dIA~~V~~~~~~P~ 230 (246)
T COG4221 206 VYKGGTALTPE-DIAEAVLFAATQPQ 230 (246)
T ss_pred HhccCCCCCHH-HHHHHHHHHHhCCC
Confidence 11222335666 99999999998643
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=215.24 Aligned_cols=196 Identities=27% Similarity=0.347 Sum_probs=171.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. ++++++++++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.++++++++|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (252)
T PRK07035 56 GGKAEALACHIGEM--EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMK 133 (252)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34678899999999 9999999999999999999999999753456777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++|+++||..+..+ .++++.|+++|++++++++++++++.++||++++|+||.+.|++.......+...+...
T Consensus 134 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 210 (252)
T PRK07035 134 EQG-GGSIVNVASVNGVSP--GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQAL 210 (252)
T ss_pred hCC-CcEEEEECchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHH
Confidence 765 689999999888633 57889999999999999999999999999999999999999998765544333333344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|.++..+|+ |+|+.+.+|+++...+++|+++.+|||+.
T Consensus 211 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~dgg~~ 251 (252)
T PRK07035 211 AHIPLRRHAEPS-EMAGAVLYLASDASSYTTGECLNVDGGYL 251 (252)
T ss_pred ccCCCCCcCCHH-HHHHHHHHHhCccccCccCCEEEeCCCcC
Confidence 567888888888 99999999999999999999999999974
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=220.69 Aligned_cols=192 Identities=20% Similarity=0.262 Sum_probs=162.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ +++.++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 63 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 139 (286)
T PRK07791 63 GGEAVANGDDIADW--DGAANLVDAAVETFGGLDVLVNNAGIL-RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWR 139 (286)
T ss_pred CCceEEEeCCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999986 556788899999999999999999999999999997
Q ss_pred hcCC-----CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 88 ESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 88 ~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+... .|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||||+|+|| +.|++.....
T Consensus 140 ~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~----- 211 (286)
T PRK07791 140 AESKAGRAVDARIINTSSGAGLQG--SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF----- 211 (286)
T ss_pred HhcccCCCCCcEEEEeCchhhCcC--CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-----
Confidence 6421 379999999988743 57889999999999999999999999999999999999 7888754321
Q ss_pred HHHHHhhcCCC--CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 163 VKLVREAAPLH--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 163 ~~~~~~~~~~~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.... ...+.+ +..+|+ |+|++++||+++.+.+++|+++.+|||+....
T Consensus 212 ~~~~-~~~~~~~~~~~~pe-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 261 (286)
T PRK07791 212 AEMM-AKPEEGEFDAMAPE-NVSPLVVWLGSAESRDVTGKVFEVEGGKISVA 261 (286)
T ss_pred HHHH-hcCcccccCCCCHH-HHHHHHHHHhCchhcCCCCcEEEEcCCceEEe
Confidence 1111 222333 345676 99999999999989999999999999987653
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=213.68 Aligned_cols=198 Identities=24% Similarity=0.331 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++++++.|.
T Consensus 49 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (252)
T PRK07677 49 PGQVLTVQMDVRNP--EDVQKMVEQIDEKFGRIDALINNAAGN-FICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWI 125 (252)
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHhCCccEEEECCCCC-CCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999974 456778899999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCC-ccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEY-PIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~-~~~~~~~~~~~~ 165 (219)
+....|+|+++||..+... .+....|+++|+|+++++++++.|+.+ +||+++.|+||+++|+.. ......+.....
T Consensus 126 ~~~~~g~ii~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~ 203 (252)
T PRK07677 126 EKGIKGNIINMVATYAWDA--GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKR 203 (252)
T ss_pred hcCCCEEEEEEcChhhccC--CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHH
Confidence 6543589999999988633 467789999999999999999999975 699999999999996432 222222333333
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....+++++.+|+ |+++++.+|+++...+++|+++.+|||+++.
T Consensus 204 ~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~ 248 (252)
T PRK07677 204 TIQSVPLGRLGTPE-EIAGLAYFLLSDEAAYINGTCITMDGGQWLN 248 (252)
T ss_pred HhccCCCCCCCCHH-HHHHHHHHHcCccccccCCCEEEECCCeecC
Confidence 33566788888888 9999999999988889999999999998765
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=214.12 Aligned_cols=198 Identities=22% Similarity=0.265 Sum_probs=173.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++.++.+|++++ +++..+++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|
T Consensus 58 ~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 134 (257)
T PRK09242 58 PEREVHGLAADVSDD--EDRRAILDWVEDHWDGLHILVNNAGGN-IRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLL 134 (257)
T ss_pred CCCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 356789999999999 999999999999999999999999985 55677788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .++||++||..+... .++...|+++|++++.++++++.++.++||+++.++||++.|++.......+...+..
T Consensus 135 ~~~~-~~~ii~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~ 211 (257)
T PRK09242 135 KQHA-SSAIVNIGSVSGLTH--VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQV 211 (257)
T ss_pred HhcC-CceEEEECccccCCC--CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHH
Confidence 8765 689999999988633 5778899999999999999999999999999999999999999876554444433333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|.+++.+|+ |++.++.+|+++...+++|+.+.+|||+..+
T Consensus 212 ~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~i~~~gg~~~~ 255 (257)
T PRK09242 212 IERTPMRRVGEPE-EVAAAVAFLCMPAASYITGQCIAVDGGFLRY 255 (257)
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCcccccccCCEEEECCCeEee
Confidence 3567888888888 9999999999988889999999999997654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=234.90 Aligned_cols=199 Identities=26% Similarity=0.352 Sum_probs=171.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..+++|++|+ ++++++++++.+.+|++|++|||||......++.+.+.++|++++++|+.+++++++.++|+|.
T Consensus 314 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 391 (520)
T PRK06484 314 GDEHLSVQADITDE--AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS 391 (520)
T ss_pred CCceeEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 35678899999999 9999999999999999999999999864456778899999999999999999999999999993
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~ 166 (219)
+ +|+||++||..+... .+++..|+++|+++++|++++++|+.++|||||+|+||+++|++...... .+......
T Consensus 392 --~-~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 466 (520)
T PRK06484 392 --Q-GGVIVNLGSIASLLA--LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSI 466 (520)
T ss_pred --c-CCEEEEECchhhcCC--CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHH
Confidence 2 689999999998733 67889999999999999999999999999999999999999998654321 11112223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
....|+++..+|+ |+|++++||+++...++||+++.+|||+..+..+
T Consensus 467 ~~~~~~~~~~~~~-dia~~~~~l~s~~~~~~~G~~i~vdgg~~~~~~~ 513 (520)
T PRK06484 467 RRRIPLGRLGDPE-EVAEAIAFLASPAASYVNGATLTVDGGWTAFGDA 513 (520)
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEEECCCccCCCCC
Confidence 3567888888888 9999999999998899999999999998766543
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=212.49 Aligned_cols=194 Identities=25% Similarity=0.387 Sum_probs=169.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++++ ++++.+++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+.+.|++
T Consensus 61 ~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 137 (255)
T PRK06841 61 GNAKGLVCDVSDS--QSVEAAVAAVISAFGRIDILVNSAGVA-LLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIA 137 (255)
T ss_pred CceEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHh
Confidence 4577999999999 999999999999999999999999986 5667778899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .++||++||..+... .+.+..|+++|+++++++++++++++++||+++.|+||+++|++.......+.. .....
T Consensus 138 ~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~ 213 (255)
T PRK06841 138 AG-GGKIVNLASQAGVVA--LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKG-ERAKK 213 (255)
T ss_pred cC-CceEEEEcchhhccC--CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHH-HHHHh
Confidence 65 689999999887633 578899999999999999999999999999999999999999986543322222 22335
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..|.+++.+|+ |+++++++|+++.+.+++|+.+.+|||+++
T Consensus 214 ~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~i~~dgg~~~ 254 (255)
T PRK06841 214 LIPAGRFAYPE-EIAAAALFLASDAAAMITGENLVIDGGYTI 254 (255)
T ss_pred cCCCCCCcCHH-HHHHHHHHHcCccccCccCCEEEECCCccC
Confidence 67888888888 999999999999999999999999999865
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=206.01 Aligned_cols=191 Identities=23% Similarity=0.297 Sum_probs=171.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
-+.++..|++++ +.+.+.+-. .+++|.+|||||+. ...++.+.+.+.+++.+.+|+++.+++.|...+.+..+
T Consensus 54 ~I~Pi~~Dls~w--ea~~~~l~~----v~pidgLVNNAgvA-~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R 126 (245)
T KOG1207|consen 54 LIIPIVGDLSAW--EALFKLLVP----VFPIDGLVNNAGVA-TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR 126 (245)
T ss_pred ceeeeEecccHH--HHHHHhhcc----cCchhhhhccchhh-hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc
Confidence 378899999997 555555443 37899999999996 88999999999999999999999999999988877766
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
...|.||++||.++. +. ..+...||++|+|+.+++|+++.|+++++||+|.++|-.+.|+|.+..-.++...+.+...
T Consensus 127 ~~~GaIVNvSSqas~-R~-~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r 204 (245)
T KOG1207|consen 127 QIKGAIVNVSSQASI-RP-LDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR 204 (245)
T ss_pred cCCceEEEecchhcc-cc-cCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhh
Confidence 557889999999986 43 7899999999999999999999999999999999999999999999877777777777799
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+|++|+...+ |+.+++.||+|+.+++.||.++.++||++.
T Consensus 205 iPl~rFaEV~-eVVnA~lfLLSd~ssmttGstlpveGGfs~ 244 (245)
T KOG1207|consen 205 IPLKRFAEVD-EVVNAVLFLLSDNSSMTTGSTLPVEGGFSN 244 (245)
T ss_pred CchhhhhHHH-HHHhhheeeeecCcCcccCceeeecCCccC
Confidence 9999999998 999999999999999999999999999974
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=215.62 Aligned_cols=195 Identities=27% Similarity=0.406 Sum_probs=163.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC--------CCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--------QDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
.++.++.+|++|+ ++++++++++.+.++++|++|||||...+. .++.+.+.++|++++++|+.+++.+++
T Consensus 49 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 49 ENYQFVPTDVSSA--EEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred CceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 3678899999999 999999999999999999999999975221 123467899999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc-CCCCcccc--
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAV-- 157 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~~~~-- 157 (219)
++.++|++++ .|+||++||..+.. + .++...|+++|+++++|+++++.+++++|||+|+|+||++. |++.....
T Consensus 127 ~~~~~~~~~~-~g~iv~isS~~~~~-~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~ 203 (266)
T PRK06171 127 AVARQMVKQH-DGVIVNMSSEAGLE-G-SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEE 203 (266)
T ss_pred HHHHHHHhcC-CcEEEEEccccccC-C-CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhh
Confidence 9999998765 68999999998863 3 57789999999999999999999999999999999999997 55432111
Q ss_pred --------chHHHHHHHHh--hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 158 --------GQERAVKLVRE--AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 158 --------~~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
..+...+.... ..|+++.+.|+ |+|+++.||+++.++++||+++.+|||+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~-eva~~~~fl~s~~~~~itG~~i~vdgg~~ 264 (266)
T PRK06171 204 ALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS-EVADLVCYLLSDRASYITGVTTNIAGGKT 264 (266)
T ss_pred hhccccCCCHHHHHhhhcccccccCCCCCCHH-HhhhheeeeeccccccceeeEEEecCccc
Confidence 01222222223 57889999998 99999999999999999999999999975
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=212.38 Aligned_cols=196 Identities=28% Similarity=0.406 Sum_probs=169.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++++|++|+ +++..+++++.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++++.+.|.+
T Consensus 52 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 128 (257)
T PRK07067 52 PAAIAVSLDVTRQ--DSIDRIVAAAVERFGGIDILFNNAALF-DMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVE 128 (257)
T ss_pred CceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 4588999999999 999999999999999999999999986 5577888899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---------ch
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------GQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------~~ 159 (219)
++.+++||++||..+.. + .++...|+++|++++++++++++++.++||+++.|+||+++|++..... ..
T Consensus 129 ~~~~~~iv~~sS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~ 206 (257)
T PRK07067 129 QGRGGKIINMASQAGRR-G-EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPP 206 (257)
T ss_pred cCCCcEEEEeCCHHhCC-C-CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCH
Confidence 64358999999987753 3 5788999999999999999999999999999999999999998754321 11
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...........|++++..|+ |+|+++++|+++...+++|+++++|||..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 207 GEKKRLVGEAVPLGRMGVPD-DLTGMALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred HHHHHHHhhcCCCCCccCHH-HHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence 12222333567889999998 999999999999899999999999999765
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=214.89 Aligned_cols=189 Identities=19% Similarity=0.267 Sum_probs=156.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|. +++.++++++ ++++++|++|||||+. . ..++|++++++|+.+++++++.+.|.|+
T Consensus 48 ~~~~~~~~~Dv~d~--~~i~~~~~~~-~~~g~id~li~nAG~~-~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 116 (275)
T PRK06940 48 GFDVSTQEVDVSSR--ESVKALAATA-QTLGPVTGLVHTAGVS-P-------SQASPEAILKVDLYGTALVLEEFGKVIA 116 (275)
T ss_pred CCeEEEEEeecCCH--HHHHHHHHHH-HhcCCCCEEEECCCcC-C-------chhhHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 45788999999999 9999999988 5689999999999974 2 2367999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccC-------------------------C---CCCcchhHHhHHHHHHHHHHHHHHhCCCCeE
Q 027744 88 ESKAGGSIVFLTSIIGAERG-------------------------L---YPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-------------------------~---~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~ 139 (219)
+ +|++++++|..+.... + .+++..|+++|+|+..++++++.++.++|||
T Consensus 117 ~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIr 193 (275)
T PRK06940 117 P---GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGAR 193 (275)
T ss_pred h---CCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeE
Confidence 5 4778999998876321 0 0246789999999999999999999999999
Q ss_pred EEEeecCCccCCCCccccc--hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 140 VNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 140 v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
||+|+||++.|++...... .+..........|++++.+|+ |+|++++||+++.++++||+.+.+|||....
T Consensus 194 vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-eia~~~~fL~s~~~~~itG~~i~vdgg~~~~ 266 (275)
T PRK06940 194 INSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPD-EIAALAEFLMGPRGSFITGSDFLVDGGATAS 266 (275)
T ss_pred EEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHH-HHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence 9999999999998643221 111122223456889989998 9999999999999999999999999997644
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=211.60 Aligned_cols=194 Identities=21% Similarity=0.302 Sum_probs=163.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|+++. +++.++++++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (260)
T PRK12823 55 GGEALALTADLETY--AGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHML 132 (260)
T ss_pred CCeEEEEEEeCCCH--HHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45688999999999 9999999999999999999999999643356788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc------cc---
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA------VG--- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~------~~--- 158 (219)
+++ .|+||++||..+. ..+...|+++|+|++.|+++++.+++++||++++|+||++.|++.... ..
T Consensus 133 ~~~-~g~iv~~sS~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 207 (260)
T PRK12823 133 AQG-GGAIVNVSSIATR----GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEK 207 (260)
T ss_pred hcC-CCeEEEEcCcccc----CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccccccc
Confidence 765 6899999998764 245578999999999999999999999999999999999999863210 00
Q ss_pred --hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 159 --QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 159 --~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
............|++++++|+ |+|+++++|+++.+.+++|+.+++|||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~~~g~~~~v~gg~~ 259 (260)
T PRK12823 208 AWYQQIVDQTLDSSLMKRYGTID-EQVAAILFLASDEASYITGTVLPVGGGDL 259 (260)
T ss_pred ccHHHHHHHHhccCCcccCCCHH-HHHHHHHHHcCcccccccCcEEeecCCCC
Confidence 011112222456888888988 99999999999988999999999999963
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=212.45 Aligned_cols=198 Identities=27% Similarity=0.389 Sum_probs=169.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||+++. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 53 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 129 (263)
T PRK08226 53 GHRCTAVVADVRDP--ASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMI 129 (263)
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 567788889999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------hHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QER 161 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~ 161 (219)
+.+ .++||++||..+.... .+.+..|+++|+++++++++++.++.+.||++++|+||+++|++...... .+.
T Consensus 130 ~~~-~~~iv~isS~~~~~~~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 207 (263)
T PRK08226 130 ARK-DGRIVMMSSVTGDMVA-DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPES 207 (263)
T ss_pred hcC-CcEEEEECcHHhcccC-CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHH
Confidence 765 6899999998774222 57788999999999999999999999999999999999999997654211 112
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.........|++++.+|+ |+|+.+.||+++.+.+++|+++.+|||++++
T Consensus 208 ~~~~~~~~~p~~~~~~~~-~va~~~~~l~~~~~~~~~g~~i~~dgg~~~~ 256 (263)
T PRK08226 208 VLTEMAKAIPLRRLADPL-EVGELAAFLASDESSYLTGTQNVIDGGSTLP 256 (263)
T ss_pred HHHHHhccCCCCCCCCHH-HHHHHHHHHcCchhcCCcCceEeECCCcccC
Confidence 222333556888888887 9999999999998999999999999998754
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=215.39 Aligned_cols=203 Identities=29% Similarity=0.364 Sum_probs=167.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.+++++++|++|. ++++++++.+.+.++++|++|||||.... ..++.+.+.++|++++++|+.+++.+++++.+.|
T Consensus 65 ~~~~~~~~~Dl~d~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (280)
T PLN02253 65 EPNVCFFHCDVTVE--DDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIM 142 (280)
T ss_pred CCceEEEEeecCCH--HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 45789999999999 99999999999999999999999997532 2467788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH----HH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE----RA 162 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~ 162 (219)
.+++ .|+|++++|..+... .++...|+++|+|++++++.+++|++++||+++.++||.+.|++.....+.+ ..
T Consensus 143 ~~~~-~g~ii~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~ 219 (280)
T PLN02253 143 IPLK-KGSIVSLCSVASAIG--GLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDA 219 (280)
T ss_pred HhcC-CceEEEecChhhccc--CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhh
Confidence 8755 689999999888633 4667799999999999999999999999999999999999998754322211 11
Q ss_pred -H---HHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCcc
Q 027744 163 -V---KLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMR 216 (219)
Q Consensus 163 -~---~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~ 216 (219)
. .......++ ++..+|+ |+|+++.+|+++.+.+++|+++.+|||+....+..+
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~-dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~~~ 277 (280)
T PLN02253 220 LAGFRAFAGKNANLKGVELTVD-DVANAVLFLASDEARYISGLNLMIDGGFTCTNHSLR 277 (280)
T ss_pred hhhhHHHhhcCCCCcCCCCCHH-HHHHHHHhhcCcccccccCcEEEECCchhhccchhe
Confidence 0 111112233 3446676 999999999999899999999999999987765544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=209.41 Aligned_cols=194 Identities=23% Similarity=0.369 Sum_probs=167.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++.++++.+.+.++++|++|||||.. ...++ +.+.++|++.+++|+.+++.+++++.+.|.
T Consensus 59 ~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~~~d~li~~ag~~-~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (255)
T PRK06113 59 GGQAFACRCDITSE--QELSALADFALSKLGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEME 134 (255)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 44688999999999 999999999999999999999999975 33444 678899999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++||++||..+.. + .+++..|+++|+|++++++++++++.+.|||++++.||++.|++.......+ ......
T Consensus 135 ~~~-~~~iv~isS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~-~~~~~~ 210 (255)
T PRK06113 135 KNG-GGVILTITSMAAEN-K-NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE-IEQKML 210 (255)
T ss_pred hcC-CcEEEEEecccccC-C-CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHH-HHHHHH
Confidence 654 68999999998863 3 5778899999999999999999999999999999999999999876543333 222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...++++++.|+ |+++++.+|+++...+++|+++.+|||...
T Consensus 211 ~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 211 QHTPIRRLGQPQ-DIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCccCCEEEECCCccc
Confidence 566788888888 999999999999899999999999999644
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=213.51 Aligned_cols=196 Identities=21% Similarity=0.294 Sum_probs=161.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCH----HHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE----DEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.+++++++|+++. +++.++++++.+.++++|++|||||......++.+.+. ++|++++++|+.+++.++++++
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 127 (262)
T TIGR03325 50 GDAVVGVEGDVRSL--DDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAAL 127 (262)
T ss_pred CCceEEEEeccCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHH
Confidence 44688999999999 99999999999999999999999997532334444443 5799999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---ch-
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQ- 159 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~- 159 (219)
|.|.+. +|+||+++|..+..+ .+....|+++|+|+++|++++++++++. ||+|+|+||++.|++..... ..
T Consensus 128 ~~~~~~--~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~ 202 (262)
T TIGR03325 128 PALVAS--RGSVIFTISNAGFYP--NGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADK 202 (262)
T ss_pred HHHhhc--CCCEEEEeccceecC--CCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccc
Confidence 999764 478999999888633 4677899999999999999999999986 99999999999999864311 11
Q ss_pred ----HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCcccc
Q 027744 160 ----ERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 211 (219)
....+......|++|+++|+ |+|++++||+++ .+.++||+++.+|||+...
T Consensus 203 ~~~~~~~~~~~~~~~p~~r~~~p~-eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~~ 258 (262)
T TIGR03325 203 SISTVPLGDMLKSVLPIGRMPDAE-EYTGAYVFFATRGDTVPATGAVLNYDGGMGVR 258 (262)
T ss_pred cccccchhhhhhhcCCCCCCCChH-HhhhheeeeecCCCcccccceEEEecCCeeec
Confidence 01123333457899999998 999999999997 4678999999999998754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=209.49 Aligned_cols=198 Identities=22% Similarity=0.284 Sum_probs=166.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++++|++|. ++++++++++.+.++++|++|||||... ...++.+.+.++|++++++|+.+++.+++.++++|+
T Consensus 49 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (260)
T PRK06523 49 EGVEFVAADLTTA--EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI 126 (260)
T ss_pred CceeEEecCCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 4678999999999 9999999999999999999999999642 245677788999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++ .|+||++||..+..+. .++...|+++|++++++++.+++++.++||++++|+||+++|++......
T Consensus 127 ~~~-~g~ii~isS~~~~~~~-~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 204 (260)
T PRK06523 127 ARG-SGVIIHVTSIQRRLPL-PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTD 204 (260)
T ss_pred hcC-CcEEEEEecccccCCC-CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCC
Confidence 765 6899999999886321 23788999999999999999999999999999999999999998643211
Q ss_pred hHHHHHHH---HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLV---REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...... ....|+++..+|+ |+|+++.||+++..++++|+.+.+|||+...
T Consensus 205 ~~~~~~~~~~~~~~~p~~~~~~~~-~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 205 YEGAKQIIMDSLGGIPLGRPAEPE-EVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHHHHHHHHhccCccCCCCCHH-HHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 01111111 1346788888888 9999999999998999999999999998653
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=209.96 Aligned_cols=197 Identities=24% Similarity=0.394 Sum_probs=170.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||+++. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++++|+
T Consensus 58 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (265)
T PRK07097 58 GIEAHGYVCDVTDE--DGVQAMVSQIEKEVGVIDILVNNAGII-KRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMI 134 (265)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 556788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------hHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QER 161 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~ 161 (219)
+.+ .++||++||..+.. + .+++..|+++|++++.+++++++++.++||++++|+||.+.|++...... ...
T Consensus 135 ~~~-~g~iv~isS~~~~~-~-~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (265)
T PRK07097 135 KKG-HGKIINICSMMSEL-G-RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHP 211 (265)
T ss_pred hcC-CcEEEEEcCccccC-C-CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchh
Confidence 765 79999999988763 3 57789999999999999999999999999999999999999997654321 111
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.........|.+++..|+ |+|+++.+|+++..++++|+.+.+|||+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~ 260 (265)
T PRK07097 212 FDQFIIAKTPAARWGDPE-DLAGPAVFLASDASNFVNGHILYVDGGILAY 260 (265)
T ss_pred HHHHHHhcCCccCCcCHH-HHHHHHHHHhCcccCCCCCCEEEECCCceec
Confidence 222233456777888887 9999999999998899999999999997654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=209.60 Aligned_cols=193 Identities=22% Similarity=0.232 Sum_probs=163.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++++ ++++.++++ ++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+.|.|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~----~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (259)
T PRK06125 56 GVDVAVHALDLSSP--EAREQLAAE----AGDIDILVNNAGAI-PGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMK 128 (259)
T ss_pred CCceEEEEecCCCH--HHHHHHHHH----hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 888877654 58899999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--------ch
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--------GQ 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--------~~ 159 (219)
+++ .|+||++||..+..+ .+.+..|+++|+|+++++++++.|+.++|||+|+|+||+++|++..... ..
T Consensus 129 ~~~-~g~iv~iss~~~~~~--~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~ 205 (259)
T PRK06125 129 ARG-SGVIVNVIGAAGENP--DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGD 205 (259)
T ss_pred HcC-CcEEEEecCccccCC--CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCC
Confidence 765 689999999888633 4678899999999999999999999999999999999999999644321 11
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+..........|++++.+|+ |+|++++||+++.+.++||+++.+|||+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~ 256 (259)
T PRK06125 206 ESRWQELLAGLPLGRPATPE-EVADLVAFLASPRSGYTSGTVVTVDGGISAR 256 (259)
T ss_pred HHHHHHHhccCCcCCCcCHH-HHHHHHHHHcCchhccccCceEEecCCeeec
Confidence 22222233456788888887 9999999999998999999999999998754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=207.48 Aligned_cols=195 Identities=18% Similarity=0.237 Sum_probs=165.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCC-CcEEEeccccCC-----CCCCCCCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGN-LDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
.++.++++|++++ ++++.+++++.+.+++ +|++|||||... ...++.+.+.++|++.+++|+.+++.+++.+
T Consensus 52 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 129 (253)
T PRK08642 52 DRAIALQADVTDR--EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAA 129 (253)
T ss_pred CceEEEEcCCCCH--HHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHH
Confidence 4688999999999 9999999999999887 999999998631 1245778899999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 83 ~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
++.|.+.+ .|+|+++||..+.. +..++..|+++|+|++.+++.++++++++|||+|+|+||+++|+........ ..
T Consensus 130 ~~~~~~~~-~g~iv~iss~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~-~~ 205 (253)
T PRK08642 130 LPGMREQG-FGRIINIGTNLFQN--PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD-EV 205 (253)
T ss_pred HHHHHhcC-CeEEEEECCccccC--CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH-HH
Confidence 99998765 68999999987642 2467789999999999999999999999999999999999999865433222 23
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........|++++.+|+ |+|+++.+|+++...+++|+.+.+|||+..
T Consensus 206 ~~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~~~vdgg~~~ 252 (253)
T PRK08642 206 FDLIAATTPLRKVTTPQ-EFADAVLFFASPWARAVTGQNLVVDGGLVM 252 (253)
T ss_pred HHHHHhcCCcCCCCCHH-HHHHHHHHHcCchhcCccCCEEEeCCCeec
Confidence 33344667888888998 999999999999889999999999999743
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=208.23 Aligned_cols=196 Identities=26% Similarity=0.430 Sum_probs=172.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++++ +++.++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+++.|.
T Consensus 59 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 135 (256)
T PRK06124 59 GGAAEALAFDIADE--EAVAAAFARIDAEHGRLDILVNNVGAR-DRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMK 135 (256)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44688999999999 999999999999999999999999985 557788889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++++++.++.|+.+.||+++.|+||.++|++.......+.......
T Consensus 136 ~~~-~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 212 (256)
T PRK06124 136 RQG-YGRIIAITSIAGQVA--RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLA 212 (256)
T ss_pred hcC-CcEEEEEeechhccC--CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHH
Confidence 765 689999999988633 57889999999999999999999999999999999999999998654433344444444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+.+++..|+ |+++++++|+++.+.++||+.+.+|||+.+
T Consensus 213 ~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~G~~i~~dgg~~~ 254 (256)
T PRK06124 213 QRTPLGRWGRPE-EIAGAAVFLASPAASYVNGHVLAVDGGYSV 254 (256)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCcccCCcCCCEEEECCCccc
Confidence 567888888888 999999999999999999999999999865
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=203.49 Aligned_cols=187 Identities=21% Similarity=0.298 Sum_probs=157.7
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
++++.+|++|. ++++.+++++.+.++++|++|||||.. ......+.+.++|++++++|+.+++.+++.+++.|++++
T Consensus 48 ~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~ 124 (236)
T PRK06483 48 AQCIQADFSTN--AGIMAFIDELKQHTDGLRAIIHNASDW-LAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG 124 (236)
T ss_pred CEEEEcCCCCH--HHHHHHHHHHHhhCCCccEEEECCccc-cCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC
Confidence 57899999999 999999999999999999999999975 334556778999999999999999999999999998753
Q ss_pred -CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 91 -AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 91 -~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
..|+||++||..+. .+ .+.+..|+++|+++++|++++++|+++ +||+|+|+||++.|+... .+.........
T Consensus 125 ~~~g~iv~~ss~~~~-~~-~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~~~~~~~~ 197 (236)
T PRK06483 125 HAASDIIHITDYVVE-KG-SDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAYRQKALAK 197 (236)
T ss_pred CCCceEEEEcchhhc-cC-CCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHHHHHHhcc
Confidence 14799999998876 33 577899999999999999999999988 599999999999875431 12222223345
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.++++...|+ |+++.+.||++ +.++||+++.+|||+.+
T Consensus 198 ~~~~~~~~~~-~va~~~~~l~~--~~~~~G~~i~vdgg~~~ 235 (236)
T PRK06483 198 SLLKIEPGEE-EIIDLVDYLLT--SCYVTGRSLPVDGGRHL 235 (236)
T ss_pred CccccCCCHH-HHHHHHHHHhc--CCCcCCcEEEeCccccc
Confidence 6788888887 99999999997 67999999999999865
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-31 Score=205.35 Aligned_cols=196 Identities=19% Similarity=0.252 Sum_probs=167.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.||+++. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|.+
T Consensus 53 ~~~~~~~~D~~~~--~~i~~~~~~~~~~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 129 (259)
T PRK12384 53 GMAYGFGADATSE--QSVLALSRGVDEIFGRVDLLVYNAGIA-KAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIR 129 (259)
T ss_pred ceeEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 4689999999999 999999999999999999999999985 5567888999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc-cCCCCccccc---------
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVG--------- 158 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v-~t~~~~~~~~--------- 158 (219)
++..++||++||..+.. + .+....|+++|+|+++++++++.+++++||+++.++||.+ .+++.....+
T Consensus 130 ~~~~~~iv~~ss~~~~~-~-~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~ 207 (259)
T PRK12384 130 DGIQGRIIQINSKSGKV-G-SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIK 207 (259)
T ss_pred CCCCcEEEEecCccccc-C-CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCC
Confidence 54247999999987753 2 4677899999999999999999999999999999999975 5665433211
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+...+...+..+++++..++ |+++++++|+++...+++|+++++|||..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~-dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~ 258 (259)
T PRK12384 208 PDEVEQYYIDKVPLKRGCDYQ-DVLNMLLFYASPKASYCTGQSINVTGGQVM 258 (259)
T ss_pred hHHHHHHHHHhCcccCCCCHH-HHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence 223333344567889999998 999999999998888999999999999865
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-31 Score=204.16 Aligned_cols=196 Identities=22% Similarity=0.313 Sum_probs=168.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|+++. ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++++.+.|+
T Consensus 47 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 123 (252)
T PRK08220 47 DYPFATFVLDVSDA--AAVAQVCQRLLAETGPLDVLVNAAGIL-RMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFR 123 (252)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 557788889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER------ 161 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~------ 161 (219)
+++ .|+|+++||..+..+ .++...|+++|++++.+++++++++.+.||++++++||.+.|++.........
T Consensus 124 ~~~-~g~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 200 (252)
T PRK08220 124 RQR-SGAIVTVGSNAAHVP--RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVI 200 (252)
T ss_pred hCC-CCEEEEECCchhccC--CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhh
Confidence 765 689999999887632 57789999999999999999999999999999999999999997654322111
Q ss_pred --HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 162 --AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 162 --~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+......|++++..|+ |+|+++++|+++...+++|+++.+|||..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~i~~~gg~~~ 250 (252)
T PRK08220 201 AGFPEQFKLGIPLGKIARPQ-EIANAVLFLASDLASHITLQDIVVDGGATL 250 (252)
T ss_pred hhHHHHHhhcCCCcccCCHH-HHHHHHHHHhcchhcCccCcEEEECCCeec
Confidence 011222446778888888 999999999999889999999999999765
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=202.35 Aligned_cols=194 Identities=20% Similarity=0.274 Sum_probs=167.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..+.||++|. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 52 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (246)
T PRK12938 52 GFDFIASEGNVGDW--DSTKAAFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMV 128 (246)
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45678889999999 999999999999999999999999985 446778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+.. + .+++..|+++|++++.+++++++++...||++++|+||++.|++..... . ...+...
T Consensus 129 ~~~-~~~iv~isS~~~~~-~-~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-~-~~~~~~~ 203 (246)
T PRK12938 129 ERG-WGRIINISSVNGQK-G-QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P-DVLEKIV 203 (246)
T ss_pred HcC-CeEEEEEechhccC-C-CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-h-HHHHHHH
Confidence 765 68999999988763 3 5788899999999999999999999999999999999999999875432 2 2222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+.++..+++ ++++++.+|+++...+++|+.+.+|||+.+
T Consensus 204 ~~~~~~~~~~~~-~v~~~~~~l~~~~~~~~~g~~~~~~~g~~~ 245 (246)
T PRK12938 204 ATIPVRRLGSPD-EIGSIVAWLASEESGFSTGADFSLNGGLHM 245 (246)
T ss_pred hcCCccCCcCHH-HHHHHHHHHcCcccCCccCcEEEECCcccC
Confidence 456777778887 999999999999889999999999999753
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=201.46 Aligned_cols=191 Identities=21% Similarity=0.300 Sum_probs=164.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH-H
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-M 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l 86 (219)
+.++.++++|+++. +++..+++++.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+++. +
T Consensus 47 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~i~~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 123 (239)
T TIGR01831 47 GGNARLLQFDVADR--VACRTLLEADIAEHGAYYGVVLNAGIT-RDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMI 123 (239)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 4566778899999999999999999999988644 4
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .++||++||..+... .+++..|+++|+++++++++++.++.++||+++.++||+++|++...... .....
T Consensus 124 ~~~~-~~~iv~vsS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~- 197 (239)
T TIGR01831 124 RARQ-GGRIITLASVSGVMG--NRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH--DLDEA- 197 (239)
T ss_pred hhcC-CeEEEEEcchhhccC--CCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH--HHHHH-
Confidence 4444 689999999888633 57888999999999999999999999999999999999999998765321 12222
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
....|+++..+|+ |+++.++||+++.+.+++|+.+.+|||+
T Consensus 198 ~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~gg~ 238 (239)
T TIGR01831 198 LKTVPMNRMGQPA-EVASLAGFLMSDGASYVTRQVISVNGGM 238 (239)
T ss_pred HhcCCCCCCCCHH-HHHHHHHHHcCchhcCccCCEEEecCCc
Confidence 2567888888888 9999999999999999999999999995
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=202.66 Aligned_cols=197 Identities=23% Similarity=0.343 Sum_probs=168.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ +++.++++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++++++.|+
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 129 (250)
T PRK08063 53 GRKALAVKANVGDV--EKIKEMFAQIDEEFGRLDVFVNNAASG-VLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME 129 (250)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999975 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+++++++++++.++.++||++++|+||++.|++...............
T Consensus 130 ~~~-~g~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~ 206 (250)
T PRK08063 130 KVG-GGKIISLSSLGSIRY--LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDAR 206 (250)
T ss_pred hcC-CeEEEEEcchhhccC--CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHh
Confidence 765 689999999877522 57788999999999999999999999999999999999999988654322222222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+.++..+++ |+|+.+++++++...+++|+++.+|||..++
T Consensus 207 ~~~~~~~~~~~~-dva~~~~~~~~~~~~~~~g~~~~~~gg~~~~ 249 (250)
T PRK08063 207 AKTPAGRMVEPE-DVANAVLFLCSPEADMIRGQTIIVDGGRSLL 249 (250)
T ss_pred cCCCCCCCcCHH-HHHHHHHHHcCchhcCccCCEEEECCCeeee
Confidence 445666777777 9999999999987888999999999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=205.96 Aligned_cols=194 Identities=25% Similarity=0.372 Sum_probs=168.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||+++. ++++++++++.+.++++|++|||||......++.+.+.++|.+.+++|+.+++.+++++.+.|+
T Consensus 95 ~~~~~~~~~Dl~~~--~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 172 (290)
T PRK06701 95 GVKCLLIPGDVSDE--AFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK 172 (290)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 44688999999999 9999999999999999999999999754456778899999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ .++||++||..++.. .+....|+++|+|++.++++++.++.+.||++++|+||.++|++.......+.... ..
T Consensus 173 ~---~g~iV~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~-~~ 246 (290)
T PRK06701 173 Q---GSAIINTGSITGYEG--NETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ-FG 246 (290)
T ss_pred h---CCeEEEEecccccCC--CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHH-HH
Confidence 4 479999999988733 57778999999999999999999999999999999999999998765433333322 33
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+++++..++ |+|+++++|+++...+++|+++.+|||+..
T Consensus 247 ~~~~~~~~~~~~-dva~~~~~ll~~~~~~~~G~~i~idgg~~~ 288 (290)
T PRK06701 247 SNTPMQRPGQPE-ELAPAYVFLASPDSSYITGQMLHVNGGVIV 288 (290)
T ss_pred hcCCcCCCcCHH-HHHHHHHHHcCcccCCccCcEEEeCCCccc
Confidence 556788888887 999999999999889999999999999754
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-31 Score=211.20 Aligned_cols=191 Identities=15% Similarity=0.097 Sum_probs=153.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEecc-ccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCY-TYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++.+++||++++ ++++++++++.+.+|++|++|||| |... ...++.+.+.++|++++++|+.+++.+++.++
T Consensus 66 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 143 (305)
T PRK08303 66 GGRGIAVQVDHLVP--EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFAL 143 (305)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34678899999999 999999999999999999999999 7521 12567778899999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeeccccccc-CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--chH
Q 027744 84 RRMKESKAGGSIVFLTSIIGAER-GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--GQE 160 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~-~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~ 160 (219)
|+|++++ +|+||++||..+... .+.+....|+++|+|+.+|+++++.|+++.|||+|+|+||++.|++..... ..+
T Consensus 144 p~m~~~~-~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~ 222 (305)
T PRK08303 144 PLLIRRP-GGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEE 222 (305)
T ss_pred HHhhhCC-CcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCcc
Confidence 9998765 689999999766421 113456789999999999999999999999999999999999999753221 111
Q ss_pred HHHHHHHhhcC-CCCCCCCchhHHHHHHHhccCCC-CcccceEEE
Q 027744 161 RAVKLVREAAP-LHRWLDVKNDLASTVIYLISDGS-RYMTGTTIY 203 (219)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~ 203 (219)
...... ...| +++..+|+ |+|++++||+++.. .++||+++.
T Consensus 223 ~~~~~~-~~~p~~~~~~~pe-evA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 223 NWRDAL-AKEPHFAISETPR-YVGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred chhhhh-ccccccccCCCHH-HHHHHHHHHHcCcchhhcCCcEEE
Confidence 111111 2345 45556777 99999999999874 589999876
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-30 Score=202.09 Aligned_cols=197 Identities=27% Similarity=0.384 Sum_probs=169.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ +++.++++++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 48 ~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (254)
T TIGR02415 48 GGKAVAYKLDVSDK--DQVFSAIDQAAEKFGGFDVMVNNAGVA-PITPILEITEEELKKVYNVNVKGVLFGIQAAARQFK 124 (254)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 667888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------- 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------- 159 (219)
+.+..++|+++||..+... .+.++.|+++|++++.+++.+++++.+.||+++.++||+++|++.......
T Consensus 125 ~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~ 202 (254)
T TIGR02415 125 KQGHGGKIINAASIAGHEG--NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKP 202 (254)
T ss_pred hCCCCeEEEEecchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCc
Confidence 8653589999999888633 578899999999999999999999999999999999999999986543211
Q ss_pred -HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 -ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...........+.+++.+|+ |+++++.+|+++...+++|+++.+|||+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~g~~~~~d~g~~~ 253 (254)
T TIGR02415 203 IGEGFEEFSSEIALGRPSEPE-DVAGLVSFLASEDSDYITGQSILVDGGMVY 253 (254)
T ss_pred hHHHHHHHHhhCCCCCCCCHH-HHHHHHHhhcccccCCccCcEEEecCCccC
Confidence 11122233556788888887 999999999999889999999999999764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=200.56 Aligned_cols=190 Identities=22% Similarity=0.362 Sum_probs=160.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++++ ++++.+.++++|++|||||......++.+.+.++|++++++|+.+++.+++.+++.|++
T Consensus 45 ~~~~~~~~D~~~~--------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 116 (235)
T PRK06550 45 GNFHFLQLDLSDD--------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLE 116 (235)
T ss_pred CcEEEEECChHHH--------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3578889999763 55556667899999999997534467778899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .++||++||..+... .++...|+++|+++++++++++.++.++||++++++||+++|++.......+........
T Consensus 117 ~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~ 193 (235)
T PRK06550 117 RK-SGIIINMCSIASFVA--GGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVAR 193 (235)
T ss_pred cC-CcEEEEEcChhhccC--CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhc
Confidence 65 689999999988633 577889999999999999999999999999999999999999986544333333333445
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..|++++..|+ |+|+++++|+++...+++|+++.+|||+.+
T Consensus 194 ~~~~~~~~~~~-~~a~~~~~l~s~~~~~~~g~~~~~~gg~~~ 234 (235)
T PRK06550 194 ETPIKRWAEPE-EVAELTLFLASGKADYMQGTIVPIDGGWTL 234 (235)
T ss_pred cCCcCCCCCHH-HHHHHHHHHcChhhccCCCcEEEECCceec
Confidence 67888888888 999999999999889999999999999754
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=201.80 Aligned_cols=194 Identities=25% Similarity=0.364 Sum_probs=167.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++.++++++.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++++.+.|.
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T PRK06949 57 GGAAHVVSLDVTDY--QSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMI 133 (258)
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999985 556777788999999999999999999999999997
Q ss_pred hcCC-------CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 88 ESKA-------GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 88 ~~~~-------~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
.+.. .++||++||..+... .+....|+++|++++.+++.++.++.++||++++|+||+++|++.......+
T Consensus 134 ~~~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~ 211 (258)
T PRK06949 134 ARAKGAGNTKPGGRIINIASVAGLRV--LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE 211 (258)
T ss_pred hcCCcCCCCCCCeEEEEECcccccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH
Confidence 6532 479999999887632 5778899999999999999999999999999999999999999876433332
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.. .......+.++.+.|+ |+++.++||+++.+.+++|+.+.+|||+
T Consensus 212 ~~-~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~~~G~~i~~dgg~ 257 (258)
T PRK06949 212 QG-QKLVSMLPRKRVGKPE-DLDGLLLLLAADESQFINGAIISADDGF 257 (258)
T ss_pred HH-HHHHhcCCCCCCcCHH-HHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence 22 2233566888888988 9999999999999999999999999997
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=199.43 Aligned_cols=194 Identities=21% Similarity=0.294 Sum_probs=169.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|+++. +++.++++++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 51 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 127 (245)
T PRK12824 51 EDQVRLKELDVTDT--EECAEALAEIEEEEGPVDILVNNAGIT-RDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMC 127 (245)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45689999999999 999999999999999999999999986 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++||++||..+. .+ .++...|+++|+++++++++++.++.+.|++++.++||++.|++..... +.......
T Consensus 128 ~~~-~~~iv~iss~~~~-~~-~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~ 202 (245)
T PRK12824 128 EQG-YGRIINISSVNGL-KG-QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG--PEVLQSIV 202 (245)
T ss_pred HhC-CeEEEEECChhhc-cC-CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC--HHHHHHHH
Confidence 765 6899999999886 33 6788999999999999999999999999999999999999999865532 22223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...++++..+++ |+++++.+|+++...+++|+.+.+|||+++
T Consensus 203 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 203 NQIPMKRLGTPE-EIAAAVAFLVSEAAGFITGETISINGGLYM 244 (245)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCccccCccCcEEEECCCeec
Confidence 556777778887 999999999988888999999999999875
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=191.69 Aligned_cols=195 Identities=28% Similarity=0.326 Sum_probs=175.8
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++||+++. ++++.+++++.+++|++|++||+.+..+ -.+.+.+.+.+.|...+++...+...+.+++.|.|.
T Consensus 58 ~~v~~cDV~~d--~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~ 135 (259)
T COG0623 58 DLVLPCDVTND--ESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN 135 (259)
T ss_pred CeEEecCCCCH--HHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC
Confidence 56899999999 9999999999999999999999999863 246778899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
. +|.|+.++-..+. +. .|.+...+.+|+++++-+|.++.+++++|||||.|.-|+++|=..........+.....
T Consensus 136 ~---ggSiltLtYlgs~-r~-vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e 210 (259)
T COG0623 136 N---GGSILTLTYLGSE-RV-VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENE 210 (259)
T ss_pred C---CCcEEEEEeccce-ee-cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHH
Confidence 6 6899999988775 33 68899999999999999999999999999999999999999976666555566666777
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
...|+++..+.+ ||+++.+||+|+-++.+||+++.||+|+++...
T Consensus 211 ~~aPl~r~vt~e-eVG~tA~fLlSdLssgiTGei~yVD~G~~i~~m 255 (259)
T COG0623 211 ANAPLRRNVTIE-EVGNTAAFLLSDLSSGITGEIIYVDSGYHIMGM 255 (259)
T ss_pred hhCCccCCCCHH-HhhhhHHHHhcchhcccccceEEEcCCceeecc
Confidence 889999999987 999999999999999999999999999998763
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=198.88 Aligned_cols=191 Identities=23% Similarity=0.358 Sum_probs=166.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|.
T Consensus 54 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 130 (245)
T PRK12937 54 GGRAIAVQADVADA--AAVTRLFDAAETAFGRIDVLVNNAGVM-PLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLG 130 (245)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhc
Confidence 45789999999999 999999999999999999999999986 556777889999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
. .++|+++||..+... .+++..|+++|++++.+++.++.++.+.|++++.++||++.|++.......+.. ....
T Consensus 131 ~---~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~~ 204 (245)
T PRK12937 131 Q---GGRIINLSTSVIALP--LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQI-DQLA 204 (245)
T ss_pred c---CcEEEEEeeccccCC--CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHH-HHHH
Confidence 4 589999999877633 578899999999999999999999999999999999999999985433222332 2333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...|+++..+++ |+++.+.+++++...+++|+.+.+|||+
T Consensus 205 ~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 244 (245)
T PRK12937 205 GLAPLERLGTPE-EIAAAVAFLAGPDGAWVNGQVLRVNGGF 244 (245)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCccccCccccEEEeCCCC
Confidence 567888888887 9999999999998889999999999986
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=200.90 Aligned_cols=196 Identities=24% Similarity=0.316 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|+ ++++.+++++.+.++++|++|||||...+..++.+.+.++|++++++|+.+++.+++++.+.|+
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (258)
T PRK07890 53 GRRALAVPTDITDE--DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA 130 (258)
T ss_pred CCceEEEecCCCCH--HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45689999999999 9999999999999999999999999864556777889999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---------c
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------G 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------~ 158 (219)
+. +++||++||..+..+ .+++..|+++|++++.+++.++.+++++||+++.++||++.|++..... .
T Consensus 131 ~~--~~~ii~~sS~~~~~~--~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~ 206 (258)
T PRK07890 131 ES--GGSIVMINSMVLRHS--QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVT 206 (258)
T ss_pred hC--CCEEEEEechhhccC--CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCC
Confidence 65 479999999988632 5788999999999999999999999999999999999999998754321 1
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..........+++++.+++ |+++++.+++++...+++|+++.+|||+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-dva~a~~~l~~~~~~~~~G~~i~~~gg~~~ 257 (258)
T PRK07890 207 VEQIYAETAANSDLKRLPTDD-EVASAVLFLASDLARAITGQTLDVNCGEYH 257 (258)
T ss_pred HHHHHHHHhhcCCccccCCHH-HHHHHHHHHcCHhhhCccCcEEEeCCcccc
Confidence 122222223456777888887 999999999998778999999999999864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=199.14 Aligned_cols=194 Identities=23% Similarity=0.353 Sum_probs=165.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+..+++|++|. +++.++++++.+.++++|++|||||.. ...++.+.+.+++++++++|+.+++.+++.+++.|++.
T Consensus 52 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 128 (251)
T PRK07069 52 VAFAAVQDVTDE--AQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS 128 (251)
T ss_pred eEEEEEeecCCH--HHHHHHHHHHHHHcCCccEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 456789999999 999999999999999999999999985 55677888999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCC--eEEEEeecCCccCCCCcccc---chHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAV---GQERAVK 164 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~g--i~v~~i~pG~v~t~~~~~~~---~~~~~~~ 164 (219)
+ .++|+++||..+... .+.+..|+++|++++.++++++.++.+++ |+++.|+||+++|++..... ..+....
T Consensus 129 ~-~~~ii~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 205 (251)
T PRK07069 129 Q-PASIVNISSVAAFKA--EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATR 205 (251)
T ss_pred C-CcEEEEecChhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHH
Confidence 5 689999999988633 57888999999999999999999997654 99999999999999865322 1222222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......+.+++.+|+ |+++.+++|+++...++||+.+.+|||++.
T Consensus 206 ~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~i~~~~g~~~ 250 (251)
T PRK07069 206 KLARGVPLGRLGEPD-DVAHAVLYLASDESRFVTGAELVIDGGICA 250 (251)
T ss_pred HHhccCCCCCCcCHH-HHHHHHHHHcCccccCccCCEEEECCCeec
Confidence 233456777778887 999999999999889999999999999764
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=199.77 Aligned_cols=190 Identities=21% Similarity=0.280 Sum_probs=163.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++..+++++.+.++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+.+++.+.|.
T Consensus 66 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 142 (256)
T PRK12748 66 GVRCEHMEIDLSQP--YAPNRVFYAVSERLGDPSILINNAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD 142 (256)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 34689999999999 999999999999999999999999985 567788889999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.. .++||++||..+..+ .++...|+++|+++++++++++.++...||+++.++||.++|++.... ......
T Consensus 143 ~~~-~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~-----~~~~~~ 214 (256)
T PRK12748 143 GKA-GGRIINLTSGQSLGP--MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE-----LKHHLV 214 (256)
T ss_pred hcC-CeEEEEECCccccCC--CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh-----HHHhhh
Confidence 654 689999999887632 567889999999999999999999999999999999999999875432 111122
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+..+...|+ |+|+.+.+|+++...+++|+++.+|||++
T Consensus 215 ~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~g~~~~~d~g~~ 255 (256)
T PRK12748 215 PKFPQGRVGEPV-DAARLIAFLVSEEAKWITGQVIHSEGGFS 255 (256)
T ss_pred ccCCCCCCcCHH-HHHHHHHHHhCcccccccCCEEEecCCcc
Confidence 345556667776 99999999999988899999999999975
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=200.51 Aligned_cols=196 Identities=25% Similarity=0.315 Sum_probs=166.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++++ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++++.|++
T Consensus 58 ~~~~~~~~Dv~~~--~~i~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~ 134 (264)
T PRK07576 58 PEGLGVSADVRDY--AAVEAAFAQIADEFGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR 134 (264)
T ss_pred CceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4678899999999 999999999999999999999999975 4567778899999999999999999999999999976
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc-CCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+|+++||..+... .+.+..|+++|++++.|+++++.++.++||+++.++||.+. |+......+.+.......
T Consensus 135 ~--~g~iv~iss~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~ 210 (264)
T PRK07576 135 P--GASIIQISAPQAFVP--MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA 210 (264)
T ss_pred C--CCEEEEECChhhccC--CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH
Confidence 4 489999999887632 57889999999999999999999999999999999999997 553333333333333333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...|+++...|+ |+|+.+.+|+++...+++|+.+.+|||+.+-.
T Consensus 211 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~~~gg~~~~~ 254 (264)
T PRK07576 211 QSVPLKRNGTKQ-DIANAALFLASDMASYITGVVLPVDGGWSLGG 254 (264)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcChhhcCccCCEEEECCCcccCc
Confidence 456788888887 99999999999888899999999999986543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-30 Score=197.22 Aligned_cols=184 Identities=26% Similarity=0.379 Sum_probs=155.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++.+|++|. +++.++++ .++++|++|||||.. ...+..+.++++|++++++|+.+++.+++.+.+.|++
T Consensus 53 ~~~~~~D~~~~--~~~~~~~~----~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-- 123 (237)
T PRK12742 53 ATAVQTDSADR--DAVIDVVR----KSGALDILVVNAGIA-VFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-- 123 (237)
T ss_pred CeEEecCCCCH--HHHHHHHH----HhCCCcEEEECCCCC-CCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--
Confidence 56788999998 77766654 357899999999985 4456677889999999999999999999999999864
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
.|+||++||..+. ..+.++...|+++|++++.+++.+++++.++||++++|+||+++|++.....+ ..+......
T Consensus 124 -~g~iv~isS~~~~-~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~---~~~~~~~~~ 198 (237)
T PRK12742 124 -GGRIIIIGSVNGD-RMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP---MKDMMHSFM 198 (237)
T ss_pred -CCeEEEEeccccc-cCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH---HHHHHHhcC
Confidence 5899999998874 22357889999999999999999999999999999999999999998654221 122233556
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
+++++.+|+ |+++.+.||+++.++++||+++.+|||++
T Consensus 199 ~~~~~~~p~-~~a~~~~~l~s~~~~~~~G~~~~~dgg~~ 236 (237)
T PRK12742 199 AIKRHGRPE-EVAGMVAWLAGPEASFVTGAMHTIDGAFG 236 (237)
T ss_pred CCCCCCCHH-HHHHHHHHHcCcccCcccCCEEEeCCCcC
Confidence 788888888 99999999999999999999999999975
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=197.43 Aligned_cols=196 Identities=22% Similarity=0.351 Sum_probs=162.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||+++. ++++++++++.+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++.+++.|.
T Consensus 51 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (248)
T PRK06947 51 GGRACVVAGDVANE--ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS 128 (248)
T ss_pred CCcEEEEEeccCCH--HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34789999999999 9999999999999999999999999864445677889999999999999999999999999887
Q ss_pred hcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
.++ ..++||++||..+.... ...+..|+++|++++++++++++++.+.||+++.++||+++|++.......+. ...
T Consensus 129 ~~~~~~~~~ii~~sS~~~~~~~-~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~-~~~ 206 (248)
T PRK06947 129 TDRGGRGGAIVNVSSIASRLGS-PNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGR-AAR 206 (248)
T ss_pred hcCCCCCcEEEEECchhhcCCC-CCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHH-HHH
Confidence 542 14789999998876322 22456899999999999999999999999999999999999998643211111 122
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.....|+++..+++ |+++.+++++++...+++|+++.+|||.
T Consensus 207 ~~~~~~~~~~~~~e-~va~~~~~l~~~~~~~~~G~~~~~~gg~ 248 (248)
T PRK06947 207 LGAQTPLGRAGEAD-EVAETIVWLLSDAASYVTGALLDVGGGR 248 (248)
T ss_pred HhhcCCCCCCcCHH-HHHHHHHHHcCccccCcCCceEeeCCCC
Confidence 22445667777776 9999999999998899999999999983
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=198.12 Aligned_cols=193 Identities=22% Similarity=0.347 Sum_probs=163.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.+++++++|+++. +++..+++++.+.+|++|++|||||...+ ..++.+.+.++|++.+++|+.+++.+++++.|+|
T Consensus 55 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (255)
T PRK05717 55 GENAWFIAMDVADE--AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYL 132 (255)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34688999999999 99999999999999999999999998533 2567788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
.+. .|+||++||..+... .+.+..|+++|++++.+++.++++++. +|++++++||++.|++....... ......
T Consensus 133 ~~~--~g~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~ 206 (255)
T PRK05717 133 RAH--NGAIVNLASTRARQS--EPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRAE-PLSEAD 206 (255)
T ss_pred HHc--CcEEEEEcchhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccch-HHHHHH
Confidence 764 489999999988633 567889999999999999999999987 49999999999999875432211 122222
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
....+.++..+|+ |+++.+.+++++...+++|+.+.+|||+.
T Consensus 207 ~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~gg~~ 248 (255)
T PRK05717 207 HAQHPAGRVGTVE-DVAAMVAWLLSRQAGFVTGQEFVVDGGMT 248 (255)
T ss_pred hhcCCCCCCcCHH-HHHHHHHHHcCchhcCccCcEEEECCCce
Confidence 2456778888888 99999999999888899999999999975
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-30 Score=200.54 Aligned_cols=195 Identities=29% Similarity=0.412 Sum_probs=153.6
Q ss_pred CcceEEEEecCCccchhHH----HHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCH-----------HHHHHHHHhhh
Q 027744 8 GQPVEVVGLDMEEDREGAF----DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-----------DEFKKLVKINF 72 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~----~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~ 72 (219)
+.++.++++|++|+ +++ +++++++.+.+|++|+||||||.. ...++.+.+. ++|.+++++|+
T Consensus 51 ~~~~~~~~~Dv~d~--~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~ 127 (267)
T TIGR02685 51 PNSAVTCQADLSNS--ATLFSRCEAIIDACFRAFGRCDVLVNNASAF-YPTPLLRGDAGEGVGDKKSLEVQVAELFGSNA 127 (267)
T ss_pred CCceEEEEccCCCc--hhhHHHHHHHHHHHHHccCCceEEEECCccC-CCCcccccccccccccchhhHHHHHHHHHhhh
Confidence 34677899999998 755 556666667789999999999975 3334433333 36999999999
Q ss_pred chHHHHHHHHHHHHHhcC-----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 73 VAPWFLLKAVGRRMKESK-----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 73 ~~~~~l~~~~~~~l~~~~-----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
.+++.+++++.+.|+... ..++|++++|..+..+ .+++..|+++|+|+++|+++++.|+.++||+++.|+||+
T Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~ 205 (267)
T TIGR02685 128 IAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP--LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGL 205 (267)
T ss_pred HHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCC--CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCC
Confidence 999999999999986531 2468999999887532 578899999999999999999999999999999999999
Q ss_pred ccCCCCccccchHHHHHHHHhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 148 HLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 148 v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
+.|+... ....... .....++. +...|+ |+++.+++|+++...+++|+.+.+|||+.+.+
T Consensus 206 ~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 266 (267)
T TIGR02685 206 SLLPDAM---PFEVQED-YRRKVPLGQREASAE-QIADVVIFLVSPKAKYITGTCIKVDGGLSLTR 266 (267)
T ss_pred ccCcccc---chhHHHH-HHHhCCCCcCCCCHH-HHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence 8876322 1222222 22345554 566776 99999999999989999999999999998764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=196.71 Aligned_cols=194 Identities=24% Similarity=0.340 Sum_probs=163.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|. +++.++++++.+.++++|++|||||......++.+.++++|++++++|+.+++.+++.+++.|.
T Consensus 51 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (248)
T PRK06123 51 GGEALAVAADVADE--ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMS 128 (248)
T ss_pred CCcEEEEEeccCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34688999999999 9999999999999999999999999864445677889999999999999999999999999997
Q ss_pred hcC--CCCeEEEeecccccccCCCCC-cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 88 ESK--AGGSIVFLTSIIGAERGLYPG-AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 88 ~~~--~~g~iv~iss~~~~~~~~~~~-~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++. ++|+|+++||..+... .+. +..|+++|+++++++++++.++.+.||++++|+||.+.|++........ ...
T Consensus 129 ~~~~~~~g~iv~~sS~~~~~~--~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~-~~~ 205 (248)
T PRK06123 129 TRHGGRGGAIVNVSSMAARLG--SPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPG-RVD 205 (248)
T ss_pred hcCCCCCeEEEEECchhhcCC--CCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHH-HHH
Confidence 642 2478999999887633 233 4679999999999999999999999999999999999999754322222 222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
......|+++..+++ |+++++++++++...+++|+++++|||
T Consensus 206 ~~~~~~p~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 206 RVKAGIPMGRGGTAE-EVARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEeecCC
Confidence 333556888878887 999999999998888899999999997
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=200.10 Aligned_cols=142 Identities=20% Similarity=0.223 Sum_probs=130.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++++++||++|+ +++.++++++.++||++|+||||||+. ........+.+++...|++|++|+..++++++|+|+++
T Consensus 64 ~v~~~~~Dvs~~--~~~~~~~~~~~~~fg~vDvLVNNAG~~-~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r 140 (282)
T KOG1205|consen 64 KVLVLQLDVSDE--ESVKKFVEWAIRHFGRVDVLVNNAGIS-LVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR 140 (282)
T ss_pred ccEEEeCccCCH--HHHHHHHHHHHHhcCCCCEEEecCccc-cccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc
Confidence 699999999999 999999999999999999999999997 47777888999999999999999999999999999998
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCC--eEEEEeecCCccCCCCccccc
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~g--i~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ .|+||++||++|+.. .|....|++||+|+.+|..+|++|+.+.+ |++ .|+||+|+|++......
T Consensus 141 ~-~GhIVvisSiaG~~~--~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~ 207 (282)
T KOG1205|consen 141 N-DGHIVVISSIAGKMP--LPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL 207 (282)
T ss_pred C-CCeEEEEeccccccC--CCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence 7 799999999999854 67778999999999999999999999877 666 99999999997765433
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-30 Score=199.65 Aligned_cols=191 Identities=17% Similarity=0.206 Sum_probs=156.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCC----cEEEeccccCCCCC-CCCC-cCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNL----DAFVHCYTYEGKMQ-DPLQ-VGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~i----d~lv~~ag~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.++.++.+|+++. ++++++++++.+.++.+ |++|||||...... ...+ .+.++|++++++|+.+++.+++.
T Consensus 54 ~~~v~~~~~Dl~~~--~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~ 131 (256)
T TIGR01500 54 GLRVVRVSLDLGAE--AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSS 131 (256)
T ss_pred CceEEEEEeccCCH--HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHH
Confidence 55789999999999 99999999998887643 69999999753322 2233 35789999999999999999999
Q ss_pred HHHHHHhcC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--
Q 027744 82 VGRRMKESK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-- 158 (219)
Q Consensus 82 ~~~~l~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-- 158 (219)
++|.|++++ ..++||++||..+..+ .+.+..|+++|+|+++|+++++.|++++||++++++||+++|++.....+
T Consensus 132 ~~~~l~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~ 209 (256)
T TIGR01500 132 VLKAFKDSPGLNRTVVNISSLCAIQP--FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES 209 (256)
T ss_pred HHHHHhhcCCCCCEEEEECCHHhCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc
Confidence 999998653 2479999999988633 57889999999999999999999999999999999999999998654221
Q ss_pred -hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 159 -QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.+..........|++++.+|+ |+|+.+++|++ ..+++||+++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~p~-eva~~~~~l~~-~~~~~~G~~~~~ 254 (256)
T TIGR01500 210 VDPDMRKGLQELKAKGKLVDPK-VSAQKLLSLLE-KDKFKSGAHVDY 254 (256)
T ss_pred CChhHHHHHHHHHhcCCCCCHH-HHHHHHHHHHh-cCCcCCcceeec
Confidence 122233344667888889998 99999999997 578999998764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=198.61 Aligned_cols=198 Identities=28% Similarity=0.415 Sum_probs=169.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ +++.++++++.+.++++|++|||||......++.+.+.++|+.++++|+.+++.+++++.+.|.
T Consensus 57 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (276)
T PRK05875 57 AGAVRYEPADVTDE--DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELV 134 (276)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35788999999999 9999999999999999999999999754446677788999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++|+++||..+... .++...|+++|++++.+++.+++++..++|+++.|+||+++|++.......+.......
T Consensus 135 ~~~-~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (276)
T PRK05875 135 RGG-GGSFVGISSIAASNT--HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYR 211 (276)
T ss_pred hcC-CcEEEEEechhhcCC--CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHH
Confidence 765 689999999988633 47788999999999999999999999999999999999999998765433333322222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+..+++.++ |+++++.+|++.....++|+++++|||+.+.
T Consensus 212 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~ 254 (276)
T PRK05875 212 ACTPLPRVGEVE-DVANLAMFLLSDAASWITGQVINVDGGHMLR 254 (276)
T ss_pred cCCCCCCCcCHH-HHHHHHHHHcCchhcCcCCCEEEECCCeecc
Confidence 456777888888 9999999999988888999999999998863
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=196.52 Aligned_cols=193 Identities=26% Similarity=0.345 Sum_probs=163.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++..+++.+.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.|+|.
T Consensus 51 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 127 (249)
T PRK06500 51 GESALVIRADAGDV--AAQKALAQALAEAFGRLDAVFINAGVA-KFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA 127 (249)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 34688999999999 999999999999999999999999985 556777889999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-c---hHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-G---QERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-~---~~~~~ 163 (219)
. .+++++++|..+... .+....|+++|+++++++++++.++.++||+++.++||.++|++..... . .....
T Consensus 128 ~---~~~~i~~~S~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 202 (249)
T PRK06500 128 N---PASIVLNGSINAHIG--MPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVA 202 (249)
T ss_pred c---CCEEEEEechHhccC--CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHH
Confidence 4 478999999877532 5778999999999999999999999999999999999999999754311 1 11222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.......|+++..+|+ |+|+++.+|+++...+++|+.+.+|||.+
T Consensus 203 ~~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~i~~~gg~~ 247 (249)
T PRK06500 203 AQIQALVPLGRFGTPE-EIAKAVLYLASDESAFIVGSEIIVDGGMS 247 (249)
T ss_pred HHHHhcCCCCCCcCHH-HHHHHHHHHcCccccCccCCeEEECCCcc
Confidence 2233556777888887 99999999999888899999999999975
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=194.99 Aligned_cols=195 Identities=25% Similarity=0.387 Sum_probs=168.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|.
T Consensus 55 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (250)
T PRK12939 55 GGRAHAIAADLADP--ASVQRFFDAAAAALGGLDGLVNNAGIT-NSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLR 131 (250)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35789999999999 999999999999999999999999986 456778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|++|++||..+.. + .+....|+++|++++.+++.++.++++.+|+++.|+||++.|++....... .......
T Consensus 132 ~~~-~g~iv~isS~~~~~-~-~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~ 207 (250)
T PRK12939 132 DSG-RGRIVNLASDTALW-G-APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD-ERHAYYL 207 (250)
T ss_pred HcC-CeEEEEECchhhcc-C-CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh-HHHHHHH
Confidence 765 68999999988763 2 577789999999999999999999999999999999999999987654322 2223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+..++.+++ |+|+++++++++..++++|+.|.+|||..+
T Consensus 208 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~i~~~gg~~~ 249 (250)
T PRK12939 208 KGRALERLQVPD-DVAGAVLFLLSDAARFVTGQLLPVNGGFVM 249 (250)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 556777888887 999999999998888999999999999765
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=194.71 Aligned_cols=193 Identities=24% Similarity=0.365 Sum_probs=165.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|+++. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.+.+++
T Consensus 52 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 128 (245)
T PRK12936 52 ERVKIFPANLSDR--DEVKALGQKAEADLEGVDILVNNAGIT-KDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMR 128 (245)
T ss_pred CceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 4678899999999 999999999999999999999999985 4567778889999999999999999999999998876
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .++||++||..+.. + .+....|+++|+++..+++.+++++.+.|+++++++||+++|++..... +...+....
T Consensus 129 ~~-~~~iv~~sS~~~~~-~-~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~ 203 (245)
T PRK12936 129 RR-YGRIINITSVVGVT-G-NPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN--DKQKEAIMG 203 (245)
T ss_pred hC-CCEEEEECCHHhCc-C-CCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC--hHHHHHHhc
Confidence 65 68999999987763 3 5778899999999999999999999999999999999999998765432 122222224
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+..++..|+ |+++++.+|+++...+++|+++.+|||+.+
T Consensus 204 ~~~~~~~~~~~-~ia~~~~~l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12936 204 AIPMKRMGTGA-EVASAVAYLASSEAAYVTGQTIHVNGGMAM 244 (245)
T ss_pred CCCCCCCcCHH-HHHHHHHHHcCccccCcCCCEEEECCCccc
Confidence 56777878887 999999999998888999999999999754
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=195.34 Aligned_cols=198 Identities=28% Similarity=0.399 Sum_probs=168.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++++ +++.++++++.+.++++|++|||||.. ...++.+.+.++|+.++++|+.+++.+.+++.+.|.
T Consensus 58 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (263)
T PRK07814 58 GRRAHVVAADLAHP--EATAGLAGQAVEAFGRLDIVVNNVGGT-MPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLML 134 (263)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999975 456777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+....|+|+++||..+... .++...|+++|++++.++++++.++.+ +|+++.|+||++.|++...............
T Consensus 135 ~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~ 211 (263)
T PRK07814 135 EHSGGGSVINISSTMGRLA--GRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPME 211 (263)
T ss_pred hhcCCeEEEEEccccccCC--CCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHH
Confidence 7433689999999988643 578899999999999999999999987 6999999999999987654322333333333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...++.+..+++ |+|+.++|++++....++|+.+.+|||.....
T Consensus 212 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~~~~~~~~ 255 (263)
T PRK07814 212 KATPLRRLGDPE-DIAAAAVYLASPAGSYLTGKTLEVDGGLTFPN 255 (263)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCcCCCEEEECCCccCCC
Confidence 456777777777 99999999999888899999999999987743
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=201.38 Aligned_cols=184 Identities=23% Similarity=0.285 Sum_probs=149.4
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
.++++||++|. ++++++++++. +++|++|||||.. .. +.|+.++++|+.+++.+++.++|+|.+
T Consensus 25 ~~~~~~Dl~~~--~~v~~~~~~~~---~~iD~li~nAG~~-~~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~-- 88 (241)
T PRK12428 25 DGFIQADLGDP--ASIDAAVAALP---GRIDALFNIAGVP-GT--------APVELVARVNFLGLRHLTEALLPRMAP-- 88 (241)
T ss_pred hHhhcccCCCH--HHHHHHHHHhc---CCCeEEEECCCCC-CC--------CCHHHhhhhchHHHHHHHHHHHHhccC--
Confidence 35689999999 99999988763 6899999999974 21 248899999999999999999999864
Q ss_pred CCCeEEEeeccccccc-------------------------CCCCCcchhHHhHHHHHHHHHHHH-HHhCCCCeEEEEee
Q 027744 91 AGGSIVFLTSIIGAER-------------------------GLYPGAAAYGACAASIHQLVRTAA-MEIGKHKIRVNGIA 144 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~-------------------------~~~~~~~~y~~sK~a~~~l~~~l~-~e~~~~gi~v~~i~ 144 (219)
+|+||++||.+++.. .+.++...|+++|+|++++++.++ .+++++|||||+|+
T Consensus 89 -~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~ 167 (241)
T PRK12428 89 -GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVA 167 (241)
T ss_pred -CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEee
Confidence 489999999988621 124677899999999999999999 99999999999999
Q ss_pred cCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 145 RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 145 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
||.+.|++..................|+++..+|+ |+|++++||+++...+++|+.+.+|||+....
T Consensus 168 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~~ 234 (241)
T PRK12428 168 PGPVFTPILGDFRSMLGQERVDSDAKRMGRPATAD-EQAAVLVFLCSDAARWINGVNLPVDGGLAATY 234 (241)
T ss_pred cCCccCcccccchhhhhhHhhhhcccccCCCCCHH-HHHHHHHHHcChhhcCccCcEEEecCchHHHh
Confidence 99999998764322111111111235777888887 99999999999888999999999999986543
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-29 Score=194.73 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=169.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. ++++.+++++.+.++++|++|||+|......++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 52 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (251)
T PRK07231 52 GGRAIAVAADVSDE--ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMR 129 (251)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34688999999999 9999999999999999999999999864556677889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--HHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~ 165 (219)
+++ .++||++||..+..+ .++...|+.+|++++.+++.++.+++++||++++++||++.|++....... +.....
T Consensus 130 ~~~-~~~iv~~sS~~~~~~--~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 206 (251)
T PRK07231 130 GEG-GGAIVNVASTAGLRP--RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAK 206 (251)
T ss_pred hcC-CcEEEEEcChhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHH
Confidence 765 689999999988633 678899999999999999999999999899999999999999986654331 122222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....+.+++..++ |+|+++++|+++...+++|+.+.+|||..+
T Consensus 207 ~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~gg~~~ 250 (251)
T PRK07231 207 FLATIPLGRLGTPE-DIANAALFLASDEASWITGVTLVVDGGRCV 250 (251)
T ss_pred HhcCCCCCCCcCHH-HHHHHHHHHhCccccCCCCCeEEECCCccC
Confidence 33556777888887 999999999998888999999999999754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=215.38 Aligned_cols=199 Identities=26% Similarity=0.389 Sum_probs=168.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++++|++++ ++++++++++.+.++++|++|||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 127 (520)
T PRK06484 50 GPDHHALAMDVSDE--AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLM 127 (520)
T ss_pred CCceeEEEeccCCH--HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34678899999999 99999999999999999999999997422 3567788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH-HHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKL 165 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~ 165 (219)
++++.+++||++||..+... .+.+..|+++|+++++|++++++|+.++||+++.|+||++.|++.......... ...
T Consensus 128 ~~~~~g~~iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~ 205 (520)
T PRK06484 128 IEQGHGAAIVNVASGAGLVA--LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSA 205 (520)
T ss_pred HhcCCCCeEEEECCcccCCC--CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHH
Confidence 87653459999999988743 578899999999999999999999999999999999999999986543221111 112
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....+.++..+|+ ++++.+.+|+++...+++|+++.+|||+...
T Consensus 206 ~~~~~~~~~~~~~~-~va~~v~~l~~~~~~~~~G~~~~~~gg~~~~ 250 (520)
T PRK06484 206 VRSRIPLGRLGRPE-EIAEAVFFLASDQASYITGSTLVVDGGWTVY 250 (520)
T ss_pred HHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCceEEecCCeecc
Confidence 22445677777887 9999999999998999999999999998654
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=197.69 Aligned_cols=192 Identities=24% Similarity=0.417 Sum_probs=156.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++++ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++++.++|.
T Consensus 60 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 136 (257)
T PRK12744 60 GAKAVAFQADLTTA--AAVEKLFDDAKAAFGRPDIAINTVGKV-LKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLN 136 (257)
T ss_pred CCcEEEEecCcCCH--HHHHHHHHHHHHhhCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhc
Confidence 34688999999999 999999999999999999999999985 456778889999999999999999999999999986
Q ss_pred hcCCCCeEEEe-ecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH--H
Q 027744 88 ESKAGGSIVFL-TSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV--K 164 (219)
Q Consensus 88 ~~~~~g~iv~i-ss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~--~ 164 (219)
. .++++++ ||..+. . .+.+..|+++|+|++.|++++++|+.++||+++.++||++.|++.......+... .
T Consensus 137 ~---~~~iv~~~ss~~~~-~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~ 210 (257)
T PRK12744 137 D---NGKIVTLVTSLLGA-F--TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHK 210 (257)
T ss_pred c---CCCEEEEecchhcc-c--CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccc
Confidence 4 4677776 454442 2 4678899999999999999999999999999999999999999764322211110 0
Q ss_pred HHHhhcCCC--CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLH--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......++. ++..|+ |+++++.+|+++ ..+++|+++.+|||+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~-dva~~~~~l~~~-~~~~~g~~~~~~gg~~~ 256 (257)
T PRK12744 211 TAAALSPFSKTGLTDIE-DIVPFIRFLVTD-GWWITGQTILINGGYTT 256 (257)
T ss_pred ccccccccccCCCCCHH-HHHHHHHHhhcc-cceeecceEeecCCccC
Confidence 011123333 667777 999999999995 67899999999999764
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=191.20 Aligned_cols=193 Identities=22% Similarity=0.304 Sum_probs=167.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++++ +++.++++++.+.++++|++|||+|.. ....+.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 49 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 125 (242)
T TIGR01829 49 GFDFRVVEGDVSSF--ESCKAAVAKVEAELGPIDVLVNNAGIT-RDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMR 125 (242)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999985 456677889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++|+++||..+. .+ .+++..|+++|++++.+++++++++.++|++++.++||++.|++..... .. ......
T Consensus 126 ~~~-~~~iv~iss~~~~-~~-~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~-~~~~~~ 200 (242)
T TIGR01829 126 ERG-WGRIINISSVNGQ-KG-QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR-ED-VLNSIV 200 (242)
T ss_pred hcC-CcEEEEEcchhhc-CC-CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc-hH-HHHHHH
Confidence 765 6899999998876 33 5778999999999999999999999999999999999999999865432 22 222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+..++..|+ ++++.+.+|+++...+++|+.+.+|||.+
T Consensus 201 ~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~G~~~~~~gg~~ 241 (242)
T TIGR01829 201 AQIPVGRLGRPE-EIAAAVAFLASEEAGYITGATLSINGGLY 241 (242)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCccCCEEEecCCcc
Confidence 456778888887 99999999999888899999999999975
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=193.46 Aligned_cols=172 Identities=22% Similarity=0.248 Sum_probs=150.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++++ +++..+.+++.+..+.||++|||||.. ..+++.+.++++.++++++|+.++..++++++|.|.
T Consensus 55 ~v~v~vi~~DLs~~--~~~~~l~~~l~~~~~~IdvLVNNAG~g-~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~ 131 (265)
T COG0300 55 GVEVEVIPADLSDP--EALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMV 131 (265)
T ss_pred CceEEEEECcCCCh--hHHHHHHHHHHhcCCcccEEEECCCcC-CccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999988999999999995 788999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|.||+|+|.++..+ .|..+.|+++|+++.+|+++|+.|+++.||+|.+++||+|.|++.........
T Consensus 132 ~~~-~G~IiNI~S~ag~~p--~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~------ 202 (265)
T COG0300 132 ERG-AGHIINIGSAAGLIP--TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVY------ 202 (265)
T ss_pred hcC-CceEEEEechhhcCC--CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccc------
Confidence 987 799999999999865 58999999999999999999999999999999999999999999862111110
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
...+...+.+|+ ++|+.++..+..
T Consensus 203 ~~~~~~~~~~~~-~va~~~~~~l~~ 226 (265)
T COG0300 203 LLSPGELVLSPE-DVAEAALKALEK 226 (265)
T ss_pred cccchhhccCHH-HHHHHHHHHHhc
Confidence 111223345565 999999998853
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=195.08 Aligned_cols=196 Identities=21% Similarity=0.310 Sum_probs=161.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++..+++++.+.++++|++|||||.. ....+.... ++|+..+++|+.+++.+++.+.+.|+
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~ 129 (258)
T PRK08628 54 QPRAEFVQVDLTDD--AQCRDAVEQTVAKFGRIDGLVNNAGVN-DGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLK 129 (258)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEECCccc-CCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhh
Confidence 45789999999999 999999999999999999999999974 444444444 99999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---c-hHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---G-QERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---~-~~~~~ 163 (219)
+. .++|+++||..+... .+++..|+++|++++++++.+++|+.++||+++.|+||.++|++..... . .....
T Consensus 130 ~~--~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 205 (258)
T PRK08628 130 AS--RGAIVNISSKTALTG--QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKL 205 (258)
T ss_pred cc--CcEEEEECCHHhccC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHH
Confidence 64 489999999888633 5788999999999999999999999999999999999999999754321 1 11111
Q ss_pred HHHHhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 164 KLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.......+.+ ++.+|+ |+|+.+++++++...+++|+.+.+|||++...
T Consensus 206 ~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~ 254 (258)
T PRK08628 206 AAITAKIPLGHRMTTAE-EIADTAVFLLSERSSHTTGQWLFVDGGYVHLD 254 (258)
T ss_pred HHHHhcCCccccCCCHH-HHHHHHHHHhChhhccccCceEEecCCccccc
Confidence 1222334553 567776 99999999999988899999999999987654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-29 Score=192.98 Aligned_cols=191 Identities=24% Similarity=0.400 Sum_probs=157.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC--CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
..+.+++||++|+ +++.++++++.+.++++|++||||+... ...++.+.+.++|+..+++|+.+++.+++.++++|
T Consensus 55 ~~~~~~~~Dl~d~--~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 132 (256)
T PRK09186 55 KKLSLVELDITDQ--ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYF 132 (256)
T ss_pred CceeEEEecCCCH--HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 3567789999999 9999999999999999999999998532 13467788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCC--------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 87 KESKAGGSIVFLTSIIGAERGL--------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~--------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
++++ .++||++||..+..... ......|+++|++++++++++++++.+.||+++.++||.+.++...
T Consensus 133 ~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---- 207 (256)
T PRK09186 133 KKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---- 207 (256)
T ss_pred HhcC-CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----
Confidence 8765 68999999987652110 0122479999999999999999999999999999999998876421
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
..........+.+++.+|+ |+|+++++++++...+++|+++.+|||++
T Consensus 208 --~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 255 (256)
T PRK09186 208 --AFLNAYKKCCNGKGMLDPD-DICGTLVFLLSDQSKYITGQNIIVDDGFS 255 (256)
T ss_pred --HHHHHHHhcCCccCCCCHH-HhhhhHhheeccccccccCceEEecCCcc
Confidence 1122222344556677887 99999999999888899999999999975
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=192.67 Aligned_cols=195 Identities=26% Similarity=0.368 Sum_probs=168.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|+++. ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++++++|+.+++.+.+.+.+.|+
T Consensus 51 ~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 127 (250)
T TIGR03206 51 GGNAQAFACDITDR--DSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMV 127 (250)
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 556777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc----chHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~ 163 (219)
+.+ .++|+++||..+.. + .+....|+++|+|++.++++++.++.+.|++++.++||.+.|++..... ......
T Consensus 128 ~~~-~~~ii~iss~~~~~-~-~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~ 204 (250)
T TIGR03206 128 ERG-AGRIVNIASDAARV-G-SSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLR 204 (250)
T ss_pred hcC-CeEEEEECchhhcc-C-CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHH
Confidence 765 68999999998863 3 5788899999999999999999999888999999999999999765432 112222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.......+.++..+++ |+|+++.+|+++...+++|+++.+|||..
T Consensus 205 ~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 249 (250)
T TIGR03206 205 EAFTRAIPLGRLGQPD-DLPGAILFFSSDDASFITGQVLSVSGGLT 249 (250)
T ss_pred HHHHhcCCccCCcCHH-HHHHHHHHHcCcccCCCcCcEEEeCCCcc
Confidence 3333566778888887 99999999999999999999999999964
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=192.99 Aligned_cols=196 Identities=23% Similarity=0.314 Sum_probs=164.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH-H
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-M 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l 86 (219)
+.++++++||++|+ ++++++++++.+.++++|++|||||.. ...+..+.+.+.|++++++|+.+++.+++++.++ |
T Consensus 60 ~~~~~~~~~Dl~d~--~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l 136 (259)
T PRK08213 60 GIDALWIAADVADE--ADIERLAEETLERFGHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSM 136 (259)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999975 4566777889999999999999999999999998 6
Q ss_pred HhcCCCCeEEEeecccccccCC--CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~--~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.+++ .++||++||..+....+ ..+...|+++|++++.+++++++++.++|+++++++||+++|++.....+. ..+
T Consensus 137 ~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~--~~~ 213 (259)
T PRK08213 137 IPRG-YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER--LGE 213 (259)
T ss_pred HhcC-CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH--HHH
Confidence 6544 58999999987652211 134589999999999999999999999999999999999999876543322 122
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|.+++++++ |+++.+.+|+++...+++|+.+.+|||..+
T Consensus 214 ~~~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~G~~~~~~~~~~~ 258 (259)
T PRK08213 214 DLLAHTPLGRLGDDE-DLKGAALLLASDASKHITGQILAVDGGVSA 258 (259)
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCeec
Confidence 233566778888887 999999999999999999999999999754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=199.67 Aligned_cols=191 Identities=22% Similarity=0.265 Sum_probs=157.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++++.+ +|++|++|||||+. ....+.+.+.++|+..+++|+.+++.+++.+.++|+
T Consensus 61 g~~~~~~~~Dv~d~--~~~~~~~~~~~~-~g~iD~li~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~ 136 (306)
T PRK07792 61 GAKAVAVAGDISQR--ATADELVATAVG-LGGLDIVVNNAGIT-RDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWR 136 (306)
T ss_pred CCeEEEEeCCCCCH--HHHHHHHHHHHH-hCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 55789999999999 999999999998 99999999999986 556778899999999999999999999999999997
Q ss_pred hcC------CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 88 ESK------AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 88 ~~~------~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
++. ..|+||++||..+.. + .++...|+++|+++++|++.++.|+.++||++|+|+||. .|++.........
T Consensus 137 ~~~~~~~~~~~g~iv~isS~~~~~-~-~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~ 213 (306)
T PRK07792 137 AKAKAAGGPVYGRIVNTSSEAGLV-G-PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP 213 (306)
T ss_pred HhhcccCCCCCcEEEEECCccccc-C-CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc
Confidence 531 137999999998863 3 467889999999999999999999999999999999994 7877543221100
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ... . ......|+ +++..+.||+++...+++|+++.+|||+...
T Consensus 214 ~-~~~-~---~~~~~~pe-~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~ 257 (306)
T PRK07792 214 D-VEA-G---GIDPLSPE-HVVPLVQFLASPAAAEVNGQVFIVYGPMVTL 257 (306)
T ss_pred h-hhh-h---ccCCCCHH-HHHHHHHHHcCccccCCCCCEEEEcCCeEEE
Confidence 0 000 0 11123555 9999999999998889999999999998653
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=196.30 Aligned_cols=188 Identities=17% Similarity=0.184 Sum_probs=158.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|+
T Consensus 61 ~~~~~~~~~D~~~~--~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 137 (273)
T PRK08278 61 GGQALPLVGDVRDE--DQVAAAVAKAVERFGGIDICVNNASAI-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLK 137 (273)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCc-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC-CccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ +|+|+++||..+......+++..|+++|++++.++++++.|+.++||++++|+|| .+.|++......
T Consensus 138 ~~~-~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-------- 208 (273)
T PRK08278 138 KSE-NPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-------- 208 (273)
T ss_pred hcC-CCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc--------
Confidence 765 6899999998765322127788999999999999999999999999999999999 578875443211
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...++.+..+|+ ++|+.+++++++...++||+++ +|++...
T Consensus 209 -~~~~~~~~~~p~-~va~~~~~l~~~~~~~~~G~~~-~~~~~~~ 249 (273)
T PRK08278 209 -GDEAMRRSRTPE-IMADAAYEILSRPAREFTGNFL-IDEEVLR 249 (273)
T ss_pred -ccccccccCCHH-HHHHHHHHHhcCccccceeEEE-eccchhh
Confidence 122345567777 9999999999998889999977 6777643
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=192.31 Aligned_cols=172 Identities=19% Similarity=0.275 Sum_probs=141.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-----CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-----MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+++++++|++++ ++++++++++.+ ++|++|||||.... ..++.+ +.++|++++++|+.+++.+++.++|
T Consensus 45 ~~~~~~~D~~~~--~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~ 118 (223)
T PRK05884 45 DVDAIVCDNTDP--ASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGD 118 (223)
T ss_pred cCcEEecCCCCH--HHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999 999998887643 69999999985211 112333 5789999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.|++ +|+||++||.. .+....|+++|+|+.+|+++++.|++++|||+|+|+||+++|++....
T Consensus 119 ~~~~---~g~Iv~isS~~------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-------- 181 (223)
T PRK05884 119 HLRS---GGSIISVVPEN------PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-------- 181 (223)
T ss_pred Hhhc---CCeEEEEecCC------CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc--------
Confidence 9964 58999999965 245678999999999999999999999999999999999998854211
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|. ..|+ |+++.+.||+++.+.++||+++.+|||+...
T Consensus 182 ---~~~p~---~~~~-~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~~ 221 (223)
T PRK05884 182 ---SRTPP---PVAA-EIARLALFLTTPAARHITGQTLHVSHGALAH 221 (223)
T ss_pred ---cCCCC---CCHH-HHHHHHHHHcCchhhccCCcEEEeCCCeecc
Confidence 11232 2555 9999999999999999999999999998653
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-29 Score=192.79 Aligned_cols=193 Identities=22% Similarity=0.333 Sum_probs=162.6
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+++++|++++ ++++++++++.+.++++|++|||||...+ ..++.+.+.+.|++.+++|+.+++.+++.+++.|++++
T Consensus 54 ~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 131 (255)
T PRK06057 54 LFVPTDVTDE--DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG 131 (255)
T ss_pred cEEEeeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC
Confidence 6789999999 99999999999999999999999997532 24566788999999999999999999999999998765
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHHHHh
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVRE 168 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~ 168 (219)
.++||++||..+. .+..+++..|+++|++++++++.++.++.++||+++.|+||.+.|++...... .+.... ...
T Consensus 132 -~g~iv~~sS~~~~-~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~ 208 (255)
T PRK06057 132 -KGSIINTASFVAV-MGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAAR-RLV 208 (255)
T ss_pred -CcEEEEEcchhhc-cCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHH-HHh
Confidence 6899999998765 33234677899999999999999999999999999999999999998654322 111111 223
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..|.+++.+|+ |+++++.+|+++...+++|+.+.+|||+..
T Consensus 209 ~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~g~~~~~~~g~~~ 249 (255)
T PRK06057 209 HVPMGRFAEPE-EIAAAVAFLASDDASFITASTFLVDGGISG 249 (255)
T ss_pred cCCCCCCcCHH-HHHHHHHHHhCccccCccCcEEEECCCeee
Confidence 45777888887 999999999999999999999999999863
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=190.92 Aligned_cols=196 Identities=26% Similarity=0.334 Sum_probs=167.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+.++++|++|||+|.. ....+.+.+.+++++++++|+.+++.+++.+++.|+
T Consensus 52 ~~~~~~~~~D~~~~--~~~~~~~~~i~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (252)
T PRK06138 52 GGRAFARQGDVGSA--EAVEALVDFVAARWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQ 128 (252)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 45689999999999 999999999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~ 163 (219)
+++ .++|+++||..+.. + .+....|+.+|++++.++++++.++...|+++++++||.+.|++...... .+...
T Consensus 129 ~~~-~~~ii~~sS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 205 (252)
T PRK06138 129 RQG-GGSIVNTASQLALA-G-GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALR 205 (252)
T ss_pred hcC-CeEEEEECChhhcc-C-CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHH
Confidence 765 68999999988763 3 57788999999999999999999999999999999999999997654321 22222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.......+.+++.+++ |+++++++++++...+++|+.+.+|||+++
T Consensus 206 ~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~ 251 (252)
T PRK06138 206 EALRARHPMNRFGTAE-EVAQAALFLASDESSFATGTTLVVDGGWLA 251 (252)
T ss_pred HHHHhcCCCCCCcCHH-HHHHHHHHHcCchhcCccCCEEEECCCeec
Confidence 2232345666677787 999999999999888999999999999864
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=190.05 Aligned_cols=193 Identities=26% Similarity=0.353 Sum_probs=164.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC--CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+++++.+|+++. ++++.+++++.+.++++|++|||||... ...++.+.++++|++.+++|+.+++.+++++++.|
T Consensus 55 ~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (250)
T PRK07774 55 GTAIAVQVDVSDP--DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHM 132 (250)
T ss_pred CcEEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 4678899999999 9999999999999999999999999753 23466778899999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
.+.+ .|+||++||..++ .+...|+++|++++.+++++++++...||+++.++||.+.|++.....+...... .
T Consensus 133 ~~~~-~~~iv~~sS~~~~-----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~-~ 205 (250)
T PRK07774 133 AKRG-GGAIVNQSSTAAW-----LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVAD-M 205 (250)
T ss_pred HHhC-CcEEEEEeccccc-----CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHH-H
Confidence 8765 6899999998764 4467899999999999999999999999999999999999998765444433323 3
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....+..++.+++ |+++.+++++++....++|+++++|+|.++.
T Consensus 206 ~~~~~~~~~~~~~-d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 206 VKGIPLSRMGTPE-DLVGMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 3556666777887 9999999999876667899999999998764
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-28 Score=189.86 Aligned_cols=192 Identities=22% Similarity=0.384 Sum_probs=164.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++++ +++.++++++.+.++++|++|||||.. ....+.+.+.+++++++++|+.+++.+++.+++.|.
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (247)
T PRK12935 55 GHDVYAVQADVSKV--EDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYIT 131 (247)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35789999999999 999999999999999999999999986 556677888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++||++||..+.. + .+++..|+++|+++++++++++.++.+.|++++.++||.+.|++..... .. ......
T Consensus 132 ~~~-~~~iv~~sS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~-~~-~~~~~~ 206 (247)
T PRK12935 132 EAE-EGRIISISSIIGQA-G-GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVP-EE-VRQKIV 206 (247)
T ss_pred HcC-CcEEEEEcchhhcC-C-CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhcc-HH-HHHHHH
Confidence 765 68999999988863 3 4778999999999999999999999989999999999999998765432 22 222223
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+.+++..++ |+++++.++++. ..+++|+.+++|||..
T Consensus 207 ~~~~~~~~~~~e-dva~~~~~~~~~-~~~~~g~~~~i~~g~~ 246 (247)
T PRK12935 207 AKIPKKRFGQAD-EIAKGVVYLCRD-GAYITGQQLNINGGLY 246 (247)
T ss_pred HhCCCCCCcCHH-HHHHHHHHHcCc-ccCccCCEEEeCCCcc
Confidence 456667778887 999999999975 4579999999999963
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=190.99 Aligned_cols=198 Identities=26% Similarity=0.364 Sum_probs=165.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++.+|++++ +++.++++++.+.++++|++|||||... ...++.+.+.++|+.++++|+.+++.+++++.+.|
T Consensus 51 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 128 (256)
T PRK12745 51 GVEVIFFPADVADL--SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRM 128 (256)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 35789999999999 9999999999999999999999999753 23567778899999999999999999999999999
Q ss_pred HhcCC-----CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 87 KESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 87 ~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
.++.. .++|+++||..+... .++...|+++|++++++++.++.++.+.|+++++++||.+.|++....... .
T Consensus 129 ~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-~ 205 (256)
T PRK12745 129 LAQPEPEELPHRSIVFVSSVNAIMV--SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK-Y 205 (256)
T ss_pred HhccCcCCCCCcEEEEECChhhccC--CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh-H
Confidence 87542 357999999888633 577789999999999999999999998999999999999999876543211 1
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.........|++++..+. |+++++.+++++...+++|+++++|||++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~-d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~~ 254 (256)
T PRK12745 206 DALIAKGLVPMPRWGEPE-DVARAVAALASGDLPYSTGQAIHVDGGLSIP 254 (256)
T ss_pred HhhhhhcCCCcCCCcCHH-HHHHHHHHHhCCcccccCCCEEEECCCeecc
Confidence 111111245677788887 9999999999988888999999999998763
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=196.97 Aligned_cols=198 Identities=16% Similarity=0.135 Sum_probs=156.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||+..+..+..+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 46 ~~~~~~~~~Dl~d~--~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~ 123 (308)
T PLN00015 46 KDSYTVMHLDLASL--DSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLK 123 (308)
T ss_pred CCeEEEEEecCCCH--HHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788899999999 9999999999988899999999999853334566788999999999999999999999999998
Q ss_pred hcCC-CCeEEEeeccccccc---C------------------------------CCCCcchhHHhHHHHHHHHHHHHHHh
Q 027744 88 ESKA-GGSIVFLTSIIGAER---G------------------------------LYPGAAAYGACAASIHQLVRTAAMEI 133 (219)
Q Consensus 88 ~~~~-~g~iv~iss~~~~~~---~------------------------------~~~~~~~y~~sK~a~~~l~~~l~~e~ 133 (219)
+++. +|+||++||..+... + .+.++.+|++||+|...+++.+++++
T Consensus 124 ~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~ 203 (308)
T PLN00015 124 KSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRY 203 (308)
T ss_pred hCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhh
Confidence 7531 489999999876411 0 01245779999999999999999999
Q ss_pred CC-CCeEEEEeecCCc-cCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 134 GK-HKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 134 ~~-~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.+ .||++++++||+| .|++..................+.+++.+|+ +.|+.+++++++.....+|+.+..||+.
T Consensus 204 ~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-~~a~~~~~l~~~~~~~~~G~~~~~~g~~ 279 (308)
T PLN00015 204 HEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEE-EAGKRLAQVVSDPSLTKSGVYWSWNGGS 279 (308)
T ss_pred cccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHH-HhhhhhhhhccccccCCCccccccCCcc
Confidence 75 6999999999999 6888754322111100001233455667777 9999999999987778899999998864
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=187.95 Aligned_cols=172 Identities=15% Similarity=0.140 Sum_probs=145.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC-CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++..+.||+++. ++++++++++.+++| ++|++|||||......++.+.+.++|.+.+++|+.+++.+++.++++|
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m 130 (227)
T PRK08862 53 TDNVYSFQLKDFSQ--ESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERM 130 (227)
T ss_pred CCCeEEEEccCCCH--HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45688899999999 999999999999999 999999999865455678889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++++|+||++||..+. +++..|+++|+|+.+|+++++.|++++|||+|+|+||++.|+.... .+.+....
T Consensus 131 ~~~~~~g~Iv~isS~~~~-----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---~~~~~~~~ 202 (227)
T PRK08862 131 RKRNKKGVIVNVISHDDH-----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---AVHWAEIQ 202 (227)
T ss_pred HhcCCCceEEEEecCCCC-----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---HHHHHHHH
Confidence 876446899999996543 5578899999999999999999999999999999999999983221 11111111
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
+|++.++.||++ +.++||+.+.-
T Consensus 203 -------------~~~~~~~~~l~~--~~~~tg~~~~~ 225 (227)
T PRK08862 203 -------------DELIRNTEYIVA--NEYFSGRVVEA 225 (227)
T ss_pred -------------HHHHhheeEEEe--cccccceEEee
Confidence 499999999997 77999998753
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-30 Score=187.58 Aligned_cols=190 Identities=17% Similarity=0.216 Sum_probs=156.4
Q ss_pred CCCCCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHH
Q 027744 2 MGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 2 ~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
|++.++..++.+++|||++. .++++.++++.+.+|++|++||+||+. +..+|++.+++|+.|.++-+..
T Consensus 48 L~ai~p~~~v~F~~~DVt~~--~~~~~~f~ki~~~fg~iDIlINgAGi~---------~dkd~e~Ti~vNLtgvin~T~~ 116 (261)
T KOG4169|consen 48 LQAINPSVSVIFIKCDVTNR--GDLEAAFDKILATFGTIDILINGAGIL---------DDKDWERTINVNLTGVINGTQL 116 (261)
T ss_pred HhccCCCceEEEEEeccccH--HHHHHHHHHHHHHhCceEEEEcccccc---------cchhHHHhhccchhhhhhhhhh
Confidence 45678889999999999999 999999999999999999999999996 4677999999999999999999
Q ss_pred HHHHHHhcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHh--CCCCeEEEEeecCCccCCCCcccc
Q 027744 82 VGRRMKESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 82 ~~~~l~~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~--~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
++|+|.++. ++|-|||+||..|..+ .+..+.|++||+++.+|+|+++... .++||+++++|||++.|++.....
T Consensus 117 alpyMdk~~gG~GGiIvNmsSv~GL~P--~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~ 194 (261)
T KOG4169|consen 117 ALPYMDKKQGGKGGIIVNMSSVAGLDP--MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENID 194 (261)
T ss_pred hhhhhhhhcCCCCcEEEEeccccccCc--cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHH
Confidence 999998864 4689999999999865 6889999999999999999998764 467999999999999999876652
Q ss_pred c---hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 158 G---QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 158 ~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. .........+....-....|+ +++..++..+.. ..||+...+|+|.
T Consensus 195 ~~~~~~e~~~~~~~~l~~~~~q~~~-~~a~~~v~aiE~---~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 195 ASGGYLEYSDSIKEALERAPKQSPA-CCAINIVNAIEY---PKNGAIWKVDSGS 244 (261)
T ss_pred hcCCcccccHHHHHHHHHcccCCHH-HHHHHHHHHHhh---ccCCcEEEEecCc
Confidence 2 111111111222222224555 899999988843 5799999999998
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=190.01 Aligned_cols=196 Identities=22% Similarity=0.304 Sum_probs=164.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH-
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM- 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l- 86 (219)
+.+++++++|++|. +++.++++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|
T Consensus 55 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~ 131 (262)
T PRK13394 55 GGKAIGVAMDVTNE--DAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMY 131 (262)
T ss_pred CceEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCccC-CCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 44688899999999 999999999999999999999999985 55667778899999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch-------
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ------- 159 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~------- 159 (219)
++.+ .++||++||..+.. + .+....|+++|++++++++.++.++.+.||++++++||.+.|++.......
T Consensus 132 ~~~~-~~~iv~~ss~~~~~-~-~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~ 208 (262)
T PRK13394 132 KDDR-GGVVIYMGSVHSHE-A-SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGI 208 (262)
T ss_pred hhcC-CcEEEEEcchhhcC-C-CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCC
Confidence 5544 68999999988763 3 567789999999999999999999998899999999999999875443221
Q ss_pred ---HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ---ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..........+.+++.+++ |+++++.++++.....++|+.+.+|||+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~~l~~~~~~~~~g~~~~~~~g~~~ 261 (262)
T PRK13394 209 SEEEVVKKVMLGKTVDGVFTTVE-DVAQTVLFLSSFPSAALTGQSFVVSHGWFM 261 (262)
T ss_pred ChHHHHHHHHhcCCCCCCCCCHH-HHHHHHHHHcCccccCCcCCEEeeCCceec
Confidence 11122222344567788887 999999999998778899999999999754
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=195.62 Aligned_cols=184 Identities=21% Similarity=0.250 Sum_probs=156.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..++||++|. ++++++++++.+.++++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|.
T Consensus 56 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~vI~nAG~~-~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~ 132 (296)
T PRK05872 56 DDRVLTVVADVTDL--AAMQAAAEEAVERFGGIDVVVANAGIA-SGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALI 132 (296)
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45677888999999 999999999999999999999999986 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch-HHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~ 166 (219)
+. .|+||++||..+... .+.+..|+++|+++++|+++++.|+.++||++++++||+++|++....... +......
T Consensus 133 ~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~ 208 (296)
T PRK05872 133 ER--RGYVLQVSSLAAFAA--APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELR 208 (296)
T ss_pred Hc--CCEEEEEeCHhhcCC--CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHH
Confidence 74 489999999988733 578899999999999999999999999999999999999999987654332 2222222
Q ss_pred Hhh--cCCCCCCCCchhHHHHHHHhccCCCCcccce
Q 027744 167 REA--APLHRWLDVKNDLASTVIYLISDGSRYMTGT 200 (219)
Q Consensus 167 ~~~--~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~ 200 (219)
.. .|+++..+++ |+++.+.++++....++++.
T Consensus 209 -~~~~~p~~~~~~~~-~va~~i~~~~~~~~~~i~~~ 242 (296)
T PRK05872 209 -ARLPWPLRRTTSVE-KCAAAFVDGIERRARRVYAP 242 (296)
T ss_pred -hhCCCcccCCCCHH-HHHHHHHHHHhcCCCEEEch
Confidence 22 2566777777 99999999998877776664
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=188.90 Aligned_cols=196 Identities=28% Similarity=0.391 Sum_probs=165.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++++ +++.++++.+.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+++.|.
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 131 (260)
T PRK06198 55 GAKAVFVQADLSDV--EDCRRVVAAADEAFGRLDALVNAAGLT-DRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMR 131 (260)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45678899999999 999999999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-----chHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-----GQERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~~~ 162 (219)
++...|++|++||..+. .+ .+....|+++|+++++++++++.++...||+++.++||++.|++..... .....
T Consensus 132 ~~~~~g~iv~~ss~~~~-~~-~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~ 209 (260)
T PRK06198 132 RRKAEGTIVNIGSMSAH-GG-QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDW 209 (260)
T ss_pred hcCCCCEEEEECCcccc-cC-CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHH
Confidence 76435899999999886 33 5778899999999999999999999999999999999999998743210 01112
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
........+.++...++ |+++.+.+++++...+++|+++.+|||-.
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~G~~~~~~~~~~ 255 (260)
T PRK06198 210 LEKAAATQPFGRLLDPD-EVARAVAFLLSDESGLMTGSVIDFDQSVW 255 (260)
T ss_pred HHHHhccCCccCCcCHH-HHHHHHHHHcChhhCCccCceEeECCccc
Confidence 22222445677777887 99999999999888899999999999864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=188.28 Aligned_cols=194 Identities=21% Similarity=0.335 Sum_probs=165.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh------CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL------GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~------g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.+++++++|++|+ +++.++++++.+.+ +++|++|||||.. ....+.+.+.+.|+.++++|+.+++.+++.
T Consensus 55 ~~~~~~~~~D~~d~--~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 131 (254)
T PRK12746 55 GGKAFLIEADLNSI--DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIG-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQ 131 (254)
T ss_pred CCcEEEEEcCcCCH--HHHHHHHHHHHHHhccccCCCCccEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 35688999999999 99999999999887 4799999999985 556777889999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 82 ~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
+++.|.+ .+++|++||..+... .+++..|+++|++++.+++++++++.++|++++.++||++.|++.......+.
T Consensus 132 ~~~~~~~---~~~~v~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~ 206 (254)
T PRK12746 132 TLPLLRA---EGRVINISSAEVRLG--FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPE 206 (254)
T ss_pred HHHHhhc---CCEEEEECCHHhcCC--CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChh
Confidence 9999864 479999999887632 57888999999999999999999999999999999999999998765444333
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.........+++++..++ |+++.+.+++++...+++|+.++++||+++
T Consensus 207 ~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~i~~~~~~ 254 (254)
T PRK12746 207 IRNFATNSSVFGRIGQVE-DIADAVAFLASSDSRWVTGQIIDVSGGFCL 254 (254)
T ss_pred HHHHHHhcCCcCCCCCHH-HHHHHHHHHcCcccCCcCCCEEEeCCCccC
Confidence 333443455667777777 999999999998777899999999999653
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=187.44 Aligned_cols=196 Identities=23% Similarity=0.345 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++++ ++++++++++.+.++++|++|||||.. ...+..+.+.++++..+++|+.+++.+++.+++.|+
T Consensus 52 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (258)
T PRK12429 52 GGKAIGVAMDVTDE--EAINAGIDYAVETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMK 128 (258)
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++ .++||++||..+.. + .++...|+++|++++.+++.++.++.+.||++++++||++.|++......
T Consensus 129 ~~~-~~~iv~iss~~~~~-~-~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~ 205 (258)
T PRK12429 129 AQG-GGRIINMASVHGLV-G-SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGIS 205 (258)
T ss_pred hcC-CeEEEEEcchhhcc-C-CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCC
Confidence 876 78999999998863 3 67889999999999999999999999999999999999999987643211
Q ss_pred -hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 -QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
............+.+++.+++ |+|+++.+++++....++|+.+.+|||++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~ 257 (258)
T PRK12429 206 EEEVLEDVLLPLVPQKRFTTVE-EIADYALFLASFAAKGVTGQAWVVDGGWTA 257 (258)
T ss_pred hHHHHHHHHhccCCccccCCHH-HHHHHHHHHcCccccCccCCeEEeCCCEec
Confidence 111222232344566778887 999999999988778899999999999864
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=184.89 Aligned_cols=189 Identities=22% Similarity=0.244 Sum_probs=159.8
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
.++++|+++. ++++++++++.+.+ ++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+.+.+++.|++++
T Consensus 44 ~~~~~D~~~~--~~~~~~~~~~~~~~-~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 118 (234)
T PRK07577 44 ELFACDLADI--EQTAATLAQINEIH-PVDAIVNNVGIA-LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE- 118 (234)
T ss_pred eEEEeeCCCH--HHHHHHHHHHHHhC-CCcEEEECCCCC-CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence 5789999999 99999999998876 589999999985 556777889999999999999999999999999998765
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHHHhhc
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREAA 170 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~ 170 (219)
.++||++||...+ . .+....|+++|+++++++++++.++.+.||++++|+||++.|++.....+ ............
T Consensus 119 ~~~iv~~sS~~~~-~--~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~ 195 (234)
T PRK07577 119 QGRIVNICSRAIF-G--ALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASI 195 (234)
T ss_pred CcEEEEEcccccc-C--CCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcC
Confidence 6899999998643 2 46788999999999999999999999999999999999999998654322 112222222456
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
++++...|+ |+|+.+++|+++...+++|+.+.+|||.+
T Consensus 196 ~~~~~~~~~-~~a~~~~~l~~~~~~~~~g~~~~~~g~~~ 233 (234)
T PRK07577 196 PMRRLGTPE-EVAAAIAFLLSDDAGFITGQVLGVDGGGS 233 (234)
T ss_pred CCCCCcCHH-HHHHHHHHHhCcccCCccceEEEecCCcc
Confidence 677767777 99999999999878889999999999965
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=186.89 Aligned_cols=200 Identities=22% Similarity=0.323 Sum_probs=167.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|. +++..+++++.+.++++|++|||+|.. ...++.+.+.++|+..+.+|+.+++.+++++++.++
T Consensus 48 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (257)
T PRK07074 48 DARFVPVACDLTDA--ASLAAALANAAAERGPVDVLVANAGAA-RAASLHDTTPASWRADNALNLEAAYLCVEAVLEGML 124 (257)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999985 445677788999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~ 166 (219)
+++ .++|+++||..+. . ..+...|+.+|++++.+++++++++.++|++++.++||++.|++...... .+......
T Consensus 125 ~~~-~~~iv~~sS~~~~-~--~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~ 200 (257)
T PRK07074 125 KRS-RGAVVNIGSVNGM-A--ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL 200 (257)
T ss_pred HcC-CeEEEEEcchhhc-C--CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH
Confidence 765 6899999997765 2 24567899999999999999999999999999999999999987543211 22222222
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
....+++++..++ |+++++.+|+++...+++|+.+.+|||+......+
T Consensus 201 ~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~ 248 (257)
T PRK07074 201 KKWYPLQDFATPD-DVANAVLFLASPAARAITGVCLPVDGGLTAGNREM 248 (257)
T ss_pred HhcCCCCCCCCHH-HHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhh
Confidence 2345677888888 99999999999888899999999999987765443
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-28 Score=185.89 Aligned_cols=191 Identities=27% Similarity=0.449 Sum_probs=159.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
...++.+|+++. +++.++++. .+++|++|||+|.. ...+..+.+.++|++.+++|+.+++.+++++.+.+.+.
T Consensus 54 ~~~~~~~D~~~~--~~v~~~~~~----~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 126 (245)
T PRK07060 54 GCEPLRLDVGDD--AAIRAALAA----AGAFDGLVNCAGIA-SLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAA 126 (245)
T ss_pred CCeEEEecCCCH--HHHHHHHHH----hCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 356789999998 777777664 57899999999985 55666778899999999999999999999999998765
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+..++||++||..+..+ .+....|+++|++++.+++.++.++.+.|++++.++||.+.|++.................
T Consensus 127 ~~~~~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~ 204 (245)
T PRK07060 127 GRGGSIVNVSSQAALVG--LPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA 204 (245)
T ss_pred CCCcEEEEEccHHHcCC--CCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc
Confidence 43489999999888633 5778899999999999999999999988999999999999999865433332222333345
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+.+++.+++ |+++++++++++....++|+.+.+|||+.+
T Consensus 205 ~~~~~~~~~~-d~a~~~~~l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK07060 205 IPLGRFAEVD-DVAAPILFLLSDAASMVSGVSLPVDGGYTA 244 (245)
T ss_pred CCCCCCCCHH-HHHHHHHHHcCcccCCccCcEEeECCCccC
Confidence 6778888888 999999999998888999999999999854
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=209.29 Aligned_cols=196 Identities=24% Similarity=0.256 Sum_probs=166.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++..+++|++|. +++.++++++.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+++.|++
T Consensus 465 ~~~~~v~~Dvtd~--~~v~~a~~~i~~~~g~iDilV~nAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~ 541 (676)
T TIGR02632 465 GRAVALKMDVTDE--QAVKAAFADVALAYGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMRE 541 (676)
T ss_pred CcEEEEECCCCCH--HHHHHHHHHHHHhcCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999999 999999999999999999999999985 5567788899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC--CCcccc---------
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD--EYPIAV--------- 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~--~~~~~~--------- 157 (219)
++.+++||++||..+... .++...|+++|++++.++++++.++++.|||+|+|+||.+.++ +.....
T Consensus 542 ~~~~g~IV~iSS~~a~~~--~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~ 619 (676)
T TIGR02632 542 QGLGGNIVFIASKNAVYA--GKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYG 619 (676)
T ss_pred cCCCCEEEEEeChhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhccc
Confidence 654589999999887633 5778999999999999999999999999999999999998643 221110
Q ss_pred -chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 -GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.............++++..+|+ |+|+++.+|+++....+||+++++|||+.-
T Consensus 620 ~~~~~~~~~~~~r~~l~r~v~pe-DVA~av~~L~s~~~~~~TG~~i~vDGG~~~ 672 (676)
T TIGR02632 620 IPADELEEHYAKRTLLKRHIFPA-DIAEAVFFLASSKSEKTTGCIITVDGGVPA 672 (676)
T ss_pred CChHHHHHHHHhcCCcCCCcCHH-HHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence 1122233344667888888887 999999999998788999999999999864
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=184.09 Aligned_cols=193 Identities=20% Similarity=0.336 Sum_probs=160.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC-------CCC-CCcCHHHHHHHHHhhhchHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-------QDP-LQVGEDEFKKLVKINFVAPWFLL 79 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~-------~~~-~~~~~~~~~~~~~~n~~~~~~l~ 79 (219)
+.++.++++|+++. ++++++++++.+.++++|++|||+|..... ..+ .+.+.++|+.++++|+.+++.+.
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 130 (253)
T PRK08217 53 GTEVRGYAANVTDE--EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCG 130 (253)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHH
Confidence 45788999999999 999999999988889999999999975211 112 56788999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 80 ~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
+.+.+.|.++..+++|+++||.... . .++...|+++|+|++++++++++++.++||+++.++||.+.|++.....
T Consensus 131 ~~~~~~l~~~~~~~~iv~~ss~~~~-~--~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-- 205 (253)
T PRK08217 131 REAAAKMIESGSKGVIINISSIARA-G--NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-- 205 (253)
T ss_pred HHHHHHHHhcCCCeEEEEEcccccc-C--CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--
Confidence 9999999876436889999987543 2 4678999999999999999999999989999999999999999875532
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..........|.+++++++ |+++++.+|++ ..+++|+++++|||+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~--~~~~~g~~~~~~gg~~~ 253 (253)
T PRK08217 206 PEALERLEKMIPVGRLGEPE-EIAHTVRFIIE--NDYVTGRVLEIDGGLRL 253 (253)
T ss_pred HHHHHHHHhcCCcCCCcCHH-HHHHHHHHHHc--CCCcCCcEEEeCCCccC
Confidence 22233333566777888887 99999999995 45789999999999853
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=201.89 Aligned_cols=190 Identities=23% Similarity=0.260 Sum_probs=162.1
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
..++.+|+++. ++++++++.+.+.++++|++|||||+. ....+.+.+.++|+.++++|+.+++.+.+.+.+.+..++
T Consensus 258 ~~~~~~Dv~~~--~~~~~~~~~~~~~~g~id~vi~~AG~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 334 (450)
T PRK08261 258 GTALALDITAP--DAPARIAEHLAERHGGLDIVVHNAGIT-RDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD 334 (450)
T ss_pred CeEEEEeCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC
Confidence 35789999999 999999999999999999999999986 567788899999999999999999999999999755444
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
+++||++||..+.. + .+++..|+++|+++++|+++++.++.++||+++.|+||+++|++...... ...+......
T Consensus 335 -~g~iv~~SS~~~~~-g-~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~~~~ 409 (450)
T PRK08261 335 -GGRIVGVSSISGIA-G-NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF--ATREAGRRMN 409 (450)
T ss_pred -CCEEEEECChhhcC-C-CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch--hHHHHHhhcC
Confidence 68999999998863 3 57889999999999999999999999999999999999999987654221 1122222345
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
++.+...|+ |+++++.||+++.+.++||+++.+|||..
T Consensus 410 ~l~~~~~p~-dva~~~~~l~s~~~~~itG~~i~v~g~~~ 447 (450)
T PRK08261 410 SLQQGGLPV-DVAETIAWLASPASGGVTGNVVRVCGQSL 447 (450)
T ss_pred CcCCCCCHH-HHHHHHHHHhChhhcCCCCCEEEECCCcc
Confidence 666767777 99999999999999999999999999864
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=185.32 Aligned_cols=184 Identities=15% Similarity=0.235 Sum_probs=152.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-----CCCCCCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-----MQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
+.++++++||+++. ++++++ .+.++++|++|||||.... ..++.+.+.+.|++.+++|+.+++.+++.+
T Consensus 42 ~~~~~~~~~Dls~~--~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 115 (235)
T PRK09009 42 HDNVQWHALDVTDE--AEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHF 115 (235)
T ss_pred cCceEEEEecCCCH--HHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 35788999999998 777764 4456899999999998632 345677888999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEeeccccccc-CCCCCcchhHHhHHHHHHHHHHHHHHhCC--CCeEEEEeecCCccCCCCccccch
Q 027744 83 GRRMKESKAGGSIVFLTSIIGAER-GLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 83 ~~~l~~~~~~g~iv~iss~~~~~~-~~~~~~~~y~~sK~a~~~l~~~l~~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
+|.|++++ .++++++||..+... .+.+++..|+++|+++++|+++++.|+.+ .+|++++|+||+++|++.....
T Consensus 116 ~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-- 192 (235)
T PRK09009 116 TPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-- 192 (235)
T ss_pred HhhccccC-CceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--
Confidence 99998765 689999998665311 11356789999999999999999999986 6899999999999999875311
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+.++..+|+ |+|+.+++++++..++++|+.+.+|||+.
T Consensus 193 --------~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~g~~~~~~g~~~ 233 (235)
T PRK09009 193 --------QNVPKGKLFTPE-YVAQCLLGIIANATPAQSGSFLAYDGETL 233 (235)
T ss_pred --------hccccCCCCCHH-HHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence 234556667777 99999999999988899999999999985
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=183.59 Aligned_cols=196 Identities=19% Similarity=0.257 Sum_probs=162.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+.++++|++|||+|......++.+.+.++|+.++++|+.+++.+++.+++.|.
T Consensus 50 ~~~~~~~~~D~~d~--~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 127 (247)
T PRK09730 50 GGKAFVLQADISDE--NQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMA 127 (247)
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 34688899999999 9999999999999999999999999754556777889999999999999999999999999987
Q ss_pred hcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+.. .+|+||++||..+.... ...+..|+++|++++.+++.++.++.+.|+++++++||.+.|++........ ....
T Consensus 128 ~~~~~~~g~~v~~sS~~~~~~~-~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~-~~~~ 205 (247)
T PRK09730 128 LKHGGSGGAIVNVSSAASRLGA-PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPG-RVDR 205 (247)
T ss_pred hcCCCCCcEEEEECchhhccCC-CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHH-HHHH
Confidence 652 24789999998776332 1234689999999999999999999999999999999999999754332222 2222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.....|+++...++ |+|+++.+++++...+++|+.+.+|||.
T Consensus 206 ~~~~~~~~~~~~~~-dva~~~~~~~~~~~~~~~g~~~~~~g~~ 247 (247)
T PRK09730 206 VKSNIPMQRGGQPE-EVAQAIVWLLSDKASYVTGSFIDLAGGK 247 (247)
T ss_pred HHhcCCCCCCcCHH-HHHHHHHhhcChhhcCccCcEEecCCCC
Confidence 22455776666776 9999999999987788999999999973
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=186.15 Aligned_cols=180 Identities=18% Similarity=0.271 Sum_probs=148.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++++++||++|. ++++++++++.+.+|++|++|||||.. ...+..+.+.+++.+++++|+.+++.+++.++|.|.+
T Consensus 49 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~lv~nag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~ 125 (246)
T PRK05599 49 TSVHVLSFDAQDL--DTHRELVKQTQELAGEISLAVVAFGIL-GDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRA 125 (246)
T ss_pred CceEEEEcccCCH--HHHHHHHHHHHHhcCCCCEEEEecCcC-CCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3578999999999 999999999999999999999999985 3344556777888999999999999999999999986
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++.+|+||++||..+... .+.+..|+++|+|+.+|+++++.|++++||++++++||++.|++.....+.
T Consensus 126 ~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~--------- 194 (246)
T PRK05599 126 QTAPAAIVAFSSIAGWRA--RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA--------- 194 (246)
T ss_pred cCCCCEEEEEeccccccC--CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC---------
Confidence 543589999999988733 577889999999999999999999999999999999999999875432110
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+ ...+|+ |+|+.++++++.... ++.+.+++++.+
T Consensus 195 --~--~~~~pe-~~a~~~~~~~~~~~~---~~~~~~~~~~~~ 228 (246)
T PRK05599 195 --P--MSVYPR-DVAAAVVSAITSSKR---STTLWIPGRLRV 228 (246)
T ss_pred --C--CCCCHH-HHHHHHHHHHhcCCC---CceEEeCccHHH
Confidence 1 113565 999999999976432 566888887643
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=184.06 Aligned_cols=141 Identities=18% Similarity=0.220 Sum_probs=132.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
++++.+.||+++. +++.+..++++++.|.+|++|||||+. +..++.+.+.+++++++++|+.+++..+++++|.|.+
T Consensus 86 g~~~~y~cdis~~--eei~~~a~~Vk~e~G~V~ILVNNAGI~-~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~ 162 (300)
T KOG1201|consen 86 GEAKAYTCDISDR--EEIYRLAKKVKKEVGDVDILVNNAGIV-TGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE 162 (300)
T ss_pred CceeEEEecCCCH--HHHHHHHHHHHHhcCCceEEEeccccc-cCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh
Confidence 3899999999999 999999999999999999999999997 7889999999999999999999999999999999999
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC---CCeEEEEeecCCccCCCCcc
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK---HKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~---~gi~v~~i~pG~v~t~~~~~ 155 (219)
.+ +|+||+|+|.+|... .++...||+||+|+.+|.+++..|+.. .||+...++|++++|.|...
T Consensus 163 ~~-~GHIV~IaS~aG~~g--~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 163 NN-NGHIVTIASVAGLFG--PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred cC-CceEEEehhhhcccC--CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence 77 899999999999844 688999999999999999999999864 67999999999999999885
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-27 Score=183.19 Aligned_cols=190 Identities=23% Similarity=0.334 Sum_probs=157.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+.+.|.
T Consensus 58 ~~~~~~~~~Dl~d~--~~~~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (258)
T PRK09134 58 GRRAVALQADLADE--AEVRALVARASAALGPITLLVNNASLF-EYDSAASFTRASWDRHMATNLRAPFVLAQAFARALP 134 (258)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCcCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999986 456777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.. .++|++++|..++.. .+.+..|+++|++++.+++++++++.+. |+++.++||++.|..... ....... .
T Consensus 135 ~~~-~~~iv~~~s~~~~~~--~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~---~~~~~~~-~ 206 (258)
T PRK09134 135 ADA-RGLVVNMIDQRVWNL--NPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS---PEDFARQ-H 206 (258)
T ss_pred hcC-CceEEEECchhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC---hHHHHHH-H
Confidence 754 689999998766522 4667799999999999999999999775 999999999998865321 1112222 2
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...++++..+++ |+|++++++++ ...++|+.+.+|||.++.
T Consensus 207 ~~~~~~~~~~~~-d~a~~~~~~~~--~~~~~g~~~~i~gg~~~~ 247 (258)
T PRK09134 207 AATPLGRGSTPE-EIAAAVRYLLD--APSVTGQMIAVDGGQHLA 247 (258)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhc--CCCcCCCEEEECCCeecc
Confidence 345666767777 99999999997 457899999999998654
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-27 Score=182.39 Aligned_cols=190 Identities=24% Similarity=0.345 Sum_probs=162.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH-HHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG-RRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l 86 (219)
+.+++++.+|+++. ++++++++++.+.++++|++|||+|.. ...++.+.+.++|++.+++|+.+++.+++.+. +.+
T Consensus 58 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 134 (249)
T PRK12827 58 GGKALGLAFDVRDF--AATRAALDAGVEEFGRLDILVNNAGIA-TDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMI 134 (249)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999989999999999986 55677888999999999999999999999999 555
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++. .+++|++||..+... .+++..|+.+|++++.+++.++.++.++|+++++++||+++|++....... ...
T Consensus 135 ~~~~-~~~iv~~sS~~~~~~--~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~ 207 (249)
T PRK12827 135 RARR-GGRIVNIASVAGVRG--NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHL 207 (249)
T ss_pred hcCC-CeEEEEECCchhcCC--CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHH
Confidence 5544 689999999888633 577889999999999999999999998999999999999999987654322 222
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
....+..++..++ |+++.+.+++++....++|+.+.+|||.
T Consensus 208 ~~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 208 LNPVPVQRLGEPD-EVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred HhhCCCcCCcCHH-HHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 2445666666776 9999999999888889999999999985
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-27 Score=181.89 Aligned_cols=193 Identities=24% Similarity=0.372 Sum_probs=165.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|+++. +++.++++.+.+.++++|++||++|.. ...++.+.+.++|++.+++|+.+++.+++.+.+.+.
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (247)
T PRK05565 54 GGDAIAVKADVSSE--EDVENLVEQIVEKFGKIDILVNNAGIS-NFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMI 130 (247)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44688999999999 999999999999999999999999986 566777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .+++|++||..+.. + .+....|+.+|++++.+++.++.++...|++++.++||+++|++....... ......
T Consensus 131 ~~~-~~~~v~~sS~~~~~-~-~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~~~~~- 205 (247)
T PRK05565 131 KRK-SGVIVNISSIWGLI-G-ASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-DKEGLA- 205 (247)
T ss_pred hcC-CcEEEEECCHhhcc-C-CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-HHHHHH-
Confidence 765 68999999988763 3 577889999999999999999999998999999999999999887654322 222222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+..++.+++ ++++.+++++++....++|+++.+|+|+.
T Consensus 206 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~~~~~~~ 246 (247)
T PRK05565 206 EEIPLGRLGKPE-EIAKVVLFLASDDASYITGQIITVDGGWT 246 (247)
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCCccCCccCcEEEecCCcc
Confidence 234556667776 99999999999999999999999999964
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=179.53 Aligned_cols=194 Identities=27% Similarity=0.430 Sum_probs=165.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|+++. +++.++++++.+.++++|++||++|.. ...+..+.+.+++++++++|+.+++.+.+.+.+.+.
T Consensus 54 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (248)
T PRK05557 54 GGKALAVQGDVSDA--ESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMM 130 (248)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556677788999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++++++||..+. .+ .++...|+++|++++.+++.+++++...|++++.++||++.|++..... ........
T Consensus 131 ~~~-~~~~v~iss~~~~-~~-~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~--~~~~~~~~ 205 (248)
T PRK05557 131 KQR-SGRIINISSVVGL-MG-NPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP--EDVKEAIL 205 (248)
T ss_pred hcC-CeEEEEEcccccC-cC-CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC--hHHHHHHH
Confidence 765 6899999998765 33 4678899999999999999999999989999999999999998765432 22222333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+.+++..++ |+++.+.+|+++....++|+.+++|||+++
T Consensus 206 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~g~~~~i~~~~~~ 247 (248)
T PRK05557 206 AQIPLGRLGQPE-EIASAVAFLASDEAAYITGQTLHVNGGMVM 247 (248)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCcccCCccccEEEecCCccC
Confidence 555667777787 999999999988778899999999999875
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=182.20 Aligned_cols=183 Identities=21% Similarity=0.252 Sum_probs=152.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++++|+++.+++++.++++++.+.+ +++|++|||||......++.+.+.++|++.+++|+.+++.+++++++.|
T Consensus 55 ~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 134 (239)
T PRK08703 55 HPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLL 134 (239)
T ss_pred CCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345778999998743378899999999888 7899999999976455678889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCC-CeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH-KIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
.+.+ .++++++||..+..+ .+++..|+++|++++.++++++.|+.++ +||++.|+||++.|++.....+.+.
T Consensus 135 ~~~~-~~~iv~~ss~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---- 207 (239)
T PRK08703 135 KQSP-DASVIFVGESHGETP--KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA---- 207 (239)
T ss_pred HhCC-CCEEEEEeccccccC--CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----
Confidence 8765 689999999888633 5778899999999999999999999876 6999999999999997654322111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
..+...++ |++..++|++++.+.++||+++.+
T Consensus 208 ------~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~ 239 (239)
T PRK08703 208 ------KSERKSYG-DVLPAFVWWASAESKGRSGEIVYL 239 (239)
T ss_pred ------ccccCCHH-HHHHHHHHHhCccccCcCCeEeeC
Confidence 11224555 999999999999999999999864
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=178.68 Aligned_cols=197 Identities=26% Similarity=0.416 Sum_probs=168.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++++.+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++.+.+.|+
T Consensus 54 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (251)
T PRK12826 54 GGKARARQVDVRDR--AALKAAVAAGVEDFGRLDILVANAGIF-PLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI 130 (251)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999986 456777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++|+++||..+. ..+.++...|+++|++++.+++.++.++.+.|++++.++||.+.|+......... ......
T Consensus 131 ~~~-~~~ii~~ss~~~~-~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~~~~~~ 207 (251)
T PRK12826 131 RAG-GGRIVLTSSVAGP-RVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-WAEAIA 207 (251)
T ss_pred HcC-CcEEEEEechHhh-ccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-HHHHHH
Confidence 766 6899999998876 1225778899999999999999999999988999999999999999765443321 122233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|.+++.+++ |+|+.++++++....+++|+.+.+|||..++
T Consensus 208 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~ 250 (251)
T PRK12826 208 AAIPLGRLGEPE-DIAAAVLFLASDEARYITGQTLPVDGGATLP 250 (251)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCcCCcEEEECCCccCC
Confidence 456777778887 9999999999887778999999999998764
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=179.69 Aligned_cols=193 Identities=21% Similarity=0.268 Sum_probs=160.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|+++. +++.++++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++++.+.|++
T Consensus 56 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 132 (252)
T PRK06077 56 GEGIGVLADVSTR--EGCETLAKATIDRYGVADILVNNAGLG-LFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE 132 (252)
T ss_pred CeeEEEEeccCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc
Confidence 4678899999999 999999999999999999999999985 5567778888999999999999999999999999865
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--HHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLV 166 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~~ 166 (219)
.++||++||..+..+ .+++..|+++|++++++++++++++++ +++++.+.||++.|++....... .......
T Consensus 133 ---~~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~ 206 (252)
T PRK06077 133 ---GGAIVNIASVAGIRP--AYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFA 206 (252)
T ss_pred ---CcEEEEEcchhccCC--CCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHH
Confidence 479999999988632 688899999999999999999999988 89999999999999875432110 0011112
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
....+.+++..++ |+|++++++++. ..++|+++++|+|+++...
T Consensus 207 ~~~~~~~~~~~~~-dva~~~~~~~~~--~~~~g~~~~i~~g~~~~~~ 250 (252)
T PRK06077 207 EKFTLMGKILDPE-EVAEFVAAILKI--ESITGQVFVLDSGESLKGG 250 (252)
T ss_pred HhcCcCCCCCCHH-HHHHHHHHHhCc--cccCCCeEEecCCeeccCC
Confidence 1223455667887 999999999963 4578999999999988753
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.4e-27 Score=183.56 Aligned_cols=194 Identities=17% Similarity=0.223 Sum_probs=160.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
...++.+|++++ +++.++++++.+.++++|++|||+|.. ...++.+.+.++|+..+++|+.+++.+++.++|.|..+
T Consensus 51 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 127 (272)
T PRK07832 51 VPEHRALDISDY--DAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAA 127 (272)
T ss_pred cceEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 355689999999 999999999999999999999999985 56778889999999999999999999999999999775
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc------chHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------GQERAV 163 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~~~ 163 (219)
+.+|+||++||..+. .+ .+.+..|+++|+++++++++++.|+.++||+++.++||.++|++..... ..+...
T Consensus 128 ~~~g~ii~isS~~~~-~~-~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 205 (272)
T PRK07832 128 GRGGHLVNVSSAAGL-VA-LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQ 205 (272)
T ss_pred CCCcEEEEEcccccc-CC-CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHH
Confidence 435899999998876 33 5778899999999999999999999999999999999999999765421 111111
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
... . ...++..+|+ |+|+.++++++ ...+++++.+.+++|+.+.+
T Consensus 206 ~~~-~-~~~~~~~~~~-~vA~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (272)
T PRK07832 206 KWV-D-RFRGHAVTPE-KAAEKILAGVE-KNRYLVYTSPDIRALYWFKR 250 (272)
T ss_pred HHH-H-hcccCCCCHH-HHHHHHHHHHh-cCCeEEecCcchHHHHHHHh
Confidence 111 1 1234556776 99999999996 56788999999999987665
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=186.24 Aligned_cols=173 Identities=18% Similarity=0.195 Sum_probs=145.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 55 g~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~ 131 (330)
T PRK06139 55 GAEVLVVPTDVTDA--DQVKALATQAASFGGRIDVWVNNVGVG-AVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFK 131 (330)
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 55788999999999 999999999999899999999999985 667888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCC-CeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH-KIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||+++|..+... .+.+..|+++|+|+.+|+++++.|+.+. ||+++.|+||+++|++........ .
T Consensus 132 ~~~-~g~iV~isS~~~~~~--~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~-----~ 203 (330)
T PRK06139 132 KQG-HGIFINMISLGGFAA--QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT-----G 203 (330)
T ss_pred HcC-CCEEEEEcChhhcCC--CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc-----c
Confidence 876 689999999988633 5788999999999999999999999874 899999999999999865321100 0
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
....+.....+|+ ++|+++++++..
T Consensus 204 ~~~~~~~~~~~pe-~vA~~il~~~~~ 228 (330)
T PRK06139 204 RRLTPPPPVYDPR-RVAKAVVRLADR 228 (330)
T ss_pred ccccCCCCCCCHH-HHHHHHHHHHhC
Confidence 0111222345666 999999998854
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-26 Score=175.63 Aligned_cols=194 Identities=29% Similarity=0.466 Sum_probs=166.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++.++++++.+.++++|++||++|.. ....+.+.+.++|+..+++|+.+++.+++.+.++++
T Consensus 55 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (249)
T PRK12825 55 GRRAQAVQADVTDK--AALEAAVAAAVERFGRIDILVNNAGIF-EDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR 131 (249)
T ss_pred CCceEEEECCcCCH--HHHHHHHHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999998889999999999975 666777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .+++|++||..+. .+ .++...|+.+|++++.+++.+++++.+.|++++.++||.+.|++............ .
T Consensus 132 ~~~-~~~~i~~SS~~~~-~~-~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~ 206 (249)
T PRK12825 132 KQR-GGRIVNISSVAGL-PG-WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK--D 206 (249)
T ss_pred hcC-CCEEEEECccccC-CC-CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh--h
Confidence 765 6899999998886 33 57788999999999999999999998889999999999999998765433222111 1
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+.+++..++ |+++.+.+++++....++|+++.++||..+
T Consensus 207 ~~~~~~~~~~~~-dva~~~~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 207 AETPLGRSGTPE-DIARAVAFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred ccCCCCCCcCHH-HHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence 245667777777 999999999988778899999999999754
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=198.52 Aligned_cols=196 Identities=26% Similarity=0.350 Sum_probs=167.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.||+++. +++.++++++.+.+|++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.+.+.|++
T Consensus 470 ~~v~~v~~Dvtd~--~~v~~~~~~~~~~~g~iDvvI~~AG~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~ 546 (681)
T PRK08324 470 DRALGVACDVTDE--AAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKA 546 (681)
T ss_pred CcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4788999999999 999999999999999999999999986 5678888999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc--cCCCCcccc---------
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH--LQDEYPIAV--------- 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v--~t~~~~~~~--------- 157 (219)
++.+|+||++||..+... .++...|+++|++++.+++.++.++.+.||+++.|+||.+ .|++.....
T Consensus 547 ~~~~g~iV~vsS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g 624 (681)
T PRK08324 547 QGLGGSIVFIASKNAVNP--GPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYG 624 (681)
T ss_pred cCCCcEEEEECCccccCC--CCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhcc
Confidence 653489999999988633 4788999999999999999999999999999999999999 777654321
Q ss_pred -chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 -GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+..........+++++..++ |+|+++++++++.....+|+++++|||...
T Consensus 625 ~~~~~~~~~~~~~~~l~~~v~~~-DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 625 LSEEELEEFYRARNLLKREVTPE-DVAEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred CChHHHHHHHHhcCCcCCccCHH-HHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence 1122223344567788888888 999999999987777899999999999754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=176.02 Aligned_cols=184 Identities=23% Similarity=0.382 Sum_probs=149.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++++ +++..++++ .+++|++|||+|.. ...++.+.+.++|++++++|+.+++.+.+ .+.+.
T Consensus 44 ~~~~~~~~~Dl~~~--~~~~~~~~~----~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~ 114 (230)
T PRK07041 44 GAPVRTAALDITDE--AAVDAFFAE----AGPFDHVVITAADT-PGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA 114 (230)
T ss_pred CCceEEEEccCCCH--HHHHHHHHh----cCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc
Confidence 45788999999999 888887765 47899999999986 55677788999999999999999999999 34443
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--HHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~ 165 (219)
+ .|+||++||..++.. .++...|+++|+++++++++++.|+.. +|++.++||++.|++....... ......
T Consensus 115 --~-~g~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~ 187 (230)
T PRK07041 115 --P-GGSLTFVSGFAAVRP--SASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAA 187 (230)
T ss_pred --C-CeEEEEECchhhcCC--CCcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHH
Confidence 2 589999999988633 578899999999999999999999976 9999999999999875432211 112222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....+.++..+|+ |+|+++.+|++. .+++|+.+.+|||+.+
T Consensus 188 ~~~~~~~~~~~~~~-dva~~~~~l~~~--~~~~G~~~~v~gg~~~ 229 (230)
T PRK07041 188 AAERLPARRVGQPE-DVANAILFLAAN--GFTTGSTVLVDGGHAI 229 (230)
T ss_pred HHhcCCCCCCcCHH-HHHHHHHHHhcC--CCcCCcEEEeCCCeec
Confidence 23455777777887 999999999974 5789999999999764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=178.79 Aligned_cols=189 Identities=21% Similarity=0.197 Sum_probs=152.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++++|++|. ++++.+++++.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|+++
T Consensus 47 ~~~~~~~Dv~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 123 (273)
T PRK06182 47 GVHPLSLDVTDE--ASIKAAVDTIIAEEGRIDVLVNNAGYG-SYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ 123 (273)
T ss_pred CCeEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc
Confidence 478899999999 999999999999999999999999985 66788889999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----------h
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----------Q 159 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----------~ 159 (219)
+ .|+||++||..+... .+....|+++|+++++++++++.|+.+.||++++++||+++|++...... .
T Consensus 124 ~-~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 200 (273)
T PRK06182 124 R-SGRIINISSMGGKIY--TPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAY 200 (273)
T ss_pred C-CCEEEEEcchhhcCC--CCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccch
Confidence 5 689999999877533 46677899999999999999999999999999999999999997531100 0
Q ss_pred -HH---HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 160 -ER---AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 160 -~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
+. .........+.++..+|+ ++|++++++++... ....+.+..|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~-~vA~~i~~~~~~~~---~~~~~~~g~~~ 249 (273)
T PRK06182 201 AEQAQAVAASMRSTYGSGRLSDPS-VIADAISKAVTARR---PKTRYAVGFGA 249 (273)
T ss_pred HHHHHHHHHHHHHhhccccCCCHH-HHHHHHHHHHhCCC---CCceeecCcch
Confidence 00 111222334566777887 99999999997421 23445554444
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=175.73 Aligned_cols=196 Identities=27% Similarity=0.440 Sum_probs=162.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|+ +++..+++++.+.++++|++||++|...+.......+.++|++++++|+.+++.+++.+.+.+...
T Consensus 59 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 136 (264)
T PRK12829 59 KVTATVADVADP--AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS 136 (264)
T ss_pred ceEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 578999999999 999999999999999999999999986456677788999999999999999999999999998876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch---------H
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---------E 160 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---------~ 160 (219)
+.+++|+++||..+. .+ .+.+..|+.+|++++.+++.+++++...++++++++||++.|++....... .
T Consensus 137 ~~~~~vv~~ss~~~~-~~-~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~ 214 (264)
T PRK12829 137 GHGGVIIALSSVAGR-LG-YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLD 214 (264)
T ss_pred CCCeEEEEecccccc-cC-CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChh
Confidence 523778888887765 33 577789999999999999999999988899999999999999876433211 1
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..........+.+++..++ |+++++.+++++....++|+.+.+|||...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~-d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~ 263 (264)
T PRK12829 215 EMEQEYLEKISLGRMVEPE-DIAATALFLASPAARYITGQAISVDGNVEY 263 (264)
T ss_pred HHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence 1111222345666777887 999999999987667889999999999764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=171.61 Aligned_cols=192 Identities=26% Similarity=0.391 Sum_probs=162.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|+ ++++++++++.+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+.+.+.+.+.
T Consensus 47 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 123 (239)
T TIGR01830 47 GVKALGVVCDVSDR--EDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI 123 (239)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999985 445666778899999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++++++||..+. .+ .+.+..|+++|++++.+++.+++++...|++++.++||.+.|++.... .. .......
T Consensus 124 ~~~-~~~~v~~sS~~~~-~g-~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~-~~-~~~~~~~ 198 (239)
T TIGR01830 124 KQR-SGRIINISSVVGL-MG-NAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL-SE-KVKKKIL 198 (239)
T ss_pred hcC-CeEEEEECCcccc-CC-CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc-Ch-HHHHHHH
Confidence 655 6899999998776 33 577899999999999999999999998999999999999998865442 22 2222223
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+.+++.+++ |+++.+++++++...+.+|+.+++|+|.
T Consensus 199 ~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~g~~~~~~~g~ 238 (239)
T TIGR01830 199 SQIPLGRFGTPE-EVANAVAFLASDEASYITGQVIHVDGGM 238 (239)
T ss_pred hcCCcCCCcCHH-HHHHHHHHHhCcccCCcCCCEEEeCCCc
Confidence 456677777887 9999999999887778999999999986
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=175.92 Aligned_cols=193 Identities=14% Similarity=0.203 Sum_probs=156.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCC--Cc--EEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGN--LD--AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~--id--~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.+++++++|+++. ++++++++++.+.++. ++ ++|||+|...+..++.+.+.++|.+.+++|+.+++.+++.++
T Consensus 47 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 124 (251)
T PRK06924 47 NSNLTFHSLDLQDV--HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFM 124 (251)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHH
Confidence 45788999999999 9999999999877653 22 899999986566778889999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccc--h
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVG--Q 159 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~--~ 159 (219)
+.|++.+..++||++||..+.. +.+++..|+++|+|++++++.++.+++ +.||++++|.||++.|++...... .
T Consensus 125 ~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~ 202 (251)
T PRK06924 125 KHTKDWKVDKRVINISSGAAKN--PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSK 202 (251)
T ss_pred HHHhccCCCceEEEecchhhcC--CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCc
Confidence 9998754357999999988752 267889999999999999999999975 468999999999999987543111 1
Q ss_pred HH--HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 160 ER--AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 160 ~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
+. .........+.+++..|+ |+|+.+++++++. .+++|+.+.+|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~-~~~~G~~~~v~~ 249 (251)
T PRK06924 203 EDFTNLDRFITLKEEGKLLSPE-YVAKALRNLLETE-DFPNGEVIDIDE 249 (251)
T ss_pred ccchHHHHHHHHhhcCCcCCHH-HHHHHHHHHHhcc-cCCCCCEeehhh
Confidence 11 111222334567777887 9999999999874 789999999875
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=172.42 Aligned_cols=194 Identities=24% Similarity=0.406 Sum_probs=164.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|+ +++.++++++.+.++++|++||++|.. ...+..+.+.++|+..+++|+.+++.+++.+.++|.
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 129 (246)
T PRK05653 53 GGEARVLVFDVSDE--AAVRALIEAAVEAFGALDILVNNAGIT-RDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI 129 (246)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999998899999999999985 456777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++||++||..+.. + ..+...|+.+|++++.+++.+++++.+.|+++++++||.+.++...... ........
T Consensus 130 ~~~-~~~ii~~ss~~~~~-~-~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~ 204 (246)
T PRK05653 130 KAR-YGRIVNISSVSGVT-G-NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--EEVKAEIL 204 (246)
T ss_pred hcC-CcEEEEECcHHhcc-C-CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--HHHHHHHH
Confidence 765 58999999987763 3 5778899999999999999999999888999999999999998765311 11222222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+.+++..++ |+++.+.+++++....++|+++.+|||.++
T Consensus 205 ~~~~~~~~~~~~-dva~~~~~~~~~~~~~~~g~~~~~~gg~~~ 246 (246)
T PRK05653 205 KEIPLGRLGQPE-EVANAVAFLASDAASYITGQVIPVNGGMYM 246 (246)
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCccCCEEEeCCCeeC
Confidence 445666777777 999999999998888899999999999864
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=167.96 Aligned_cols=195 Identities=24% Similarity=0.345 Sum_probs=164.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-----CCCCCCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-----MQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
|.++.+.++|++++ ++++.++...+.+||++|.+|||||+... ..+-...+.+++++.+++|+.|+|+..+.-
T Consensus 54 g~~~vf~padvtse--kdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~ 131 (260)
T KOG1199|consen 54 GGKVVFTPADVTSE--KDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG 131 (260)
T ss_pred CCceEEeccccCcH--HHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence 67899999999999 99999999999999999999999997532 223344678999999999999999999999
Q ss_pred HHHHHhcC-----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 83 GRRMKESK-----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 83 ~~~l~~~~-----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.-.|-... .+|.||+..|.++. .+ ..++.+|++||.++.+|+.-++++++..|||++.|.||..+||+....
T Consensus 132 aglmg~nepdq~gqrgviintasvaaf-dg-q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl- 208 (260)
T KOG1199|consen 132 AGLMGENEPDQNGQRGVIINTASVAAF-DG-QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL- 208 (260)
T ss_pred hhhhcCCCCCCCCcceEEEeeceeeee-cC-ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh-
Confidence 88886542 24889999999987 44 688999999999999999999999999999999999999999998875
Q ss_pred chHHHHHHHHhhcC-CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAP-LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
++....+.....| ..|.+.|. |-+..+-... ++.++||++|.+||...++
T Consensus 209 -pekv~~fla~~ipfpsrlg~p~-eyahlvqaii--enp~lngevir~dgalrm~ 259 (260)
T KOG1199|consen 209 -PEKVKSFLAQLIPFPSRLGHPH-EYAHLVQAII--ENPYLNGEVIRFDGALRMP 259 (260)
T ss_pred -hHHHHHHHHHhCCCchhcCChH-HHHHHHHHHH--hCcccCCeEEEecceecCC
Confidence 3334444445555 34677887 9998888887 6789999999999987654
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=166.01 Aligned_cols=180 Identities=19% Similarity=0.245 Sum_probs=147.3
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHH--hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQI--LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
...++|+++.|+++. ++++.+++++.+. ..++|++|||||+..+.....+.+.+.|.+.+++|..++..++|+++|
T Consensus 52 ~d~rvHii~Ldvt~d--eS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lP 129 (249)
T KOG1611|consen 52 SDSRVHIIQLDVTCD--ESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLP 129 (249)
T ss_pred cCCceEEEEEecccH--HHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHH
Confidence 467999999999999 9999999999988 357999999999987777888888999999999999999999999999
Q ss_pred HHHhcCC----------CCeEEEeecccccccCC-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 85 RMKESKA----------GGSIVFLTSIIGAERGL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 85 ~l~~~~~----------~g~iv~iss~~~~~~~~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
++++... ++.|||+||.++...+. ..++.+|.+||+|+..++|+++.++++.+|-+..++||||+|+|.
T Consensus 130 LLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg 209 (249)
T KOG1611|consen 130 LLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG 209 (249)
T ss_pred HHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence 9987531 24799999998874331 246789999999999999999999999999999999999999998
Q ss_pred ccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 154 PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
..... .+++ +-+..++.-...-...=+|..++-|+
T Consensus 210 g~~a~-----------------ltve-eSts~l~~~i~kL~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 210 GKKAA-----------------LTVE-ESTSKLLASINKLKNEHNGGFFNRDG 244 (249)
T ss_pred CCCcc-----------------cchh-hhHHHHHHHHHhcCcccCcceEccCC
Confidence 84311 2334 55555544444433444788887775
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=176.53 Aligned_cols=191 Identities=20% Similarity=0.234 Sum_probs=155.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ +++..+++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 48 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 124 (275)
T PRK08263 48 GDRLLPLALDVTDR--AAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR 124 (275)
T ss_pred cCCeeEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCc-cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688899999999 999999999999999999999999986 667788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-------hH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------QE 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~ 160 (219)
+++ .++||++||..+... .+....|+++|++++.+++.++.++.+.|++++.++||.+.|++...... ..
T Consensus 125 ~~~-~~~iv~vsS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~ 201 (275)
T PRK08263 125 EQR-SGHIIQISSIGGISA--FPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYD 201 (275)
T ss_pred hcC-CCEEEEEcChhhcCC--CCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhh
Confidence 765 689999999888633 57788999999999999999999999999999999999999998742110 11
Q ss_pred HHHHHHHhhcCCCCC-CCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 161 RAVKLVREAAPLHRW-LDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
..........+.+++ .+|+ |+++.++++++.. ..+++++...++
T Consensus 202 ~~~~~~~~~~~~~~~~~~p~-dva~~~~~l~~~~--~~~~~~~~~~~~ 246 (275)
T PRK08263 202 TLREELAEQWSERSVDGDPE-AAAEALLKLVDAE--NPPLRLFLGSGV 246 (275)
T ss_pred hHHHHHHHHHHhccCCCCHH-HHHHHHHHHHcCC--CCCeEEEeCchH
Confidence 111222233455566 7777 9999999999753 335666554443
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-25 Score=172.52 Aligned_cols=196 Identities=21% Similarity=0.342 Sum_probs=161.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++..+++++.+.++++|++||++|.. ......+.+++++++++++|+.+++.+++.+++.|+
T Consensus 49 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 125 (255)
T TIGR01963 49 GGSVIYLVADVTKE--DEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMK 125 (255)
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999986 445666778899999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------- 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------- 159 (219)
+.+ .+++|++||..+. .+ .+.+..|+.+|++++.++++++.++...+++++.++||++.|++.......
T Consensus 126 ~~~-~~~~v~~ss~~~~-~~-~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~ 202 (255)
T TIGR01963 126 KQG-WGRIINIASAHGL-VA-SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIP 202 (255)
T ss_pred hcC-CeEEEEEcchhhc-CC-CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCC
Confidence 765 6899999998776 33 577899999999999999999999988899999999999999865332111
Q ss_pred --HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 --ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...........+.+.+.+++ |+|+++++++++....++|+.+++|||++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-d~a~~~~~~~~~~~~~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 203 EEQVIREVMLPGQPTKRFVTVD-EVAETALFLASDAAAGITGQAIVLDGGWTA 254 (255)
T ss_pred chHHHHHHHHccCccccCcCHH-HHHHHHHHHcCccccCccceEEEEcCcccc
Confidence 11111121233455677777 999999999987666789999999999864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=193.60 Aligned_cols=178 Identities=16% Similarity=0.172 Sum_probs=147.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++|. +++.++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|.
T Consensus 363 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 439 (582)
T PRK05855 363 GAVAHAYRVDVSDA--DAMEAFAEWVRAEHGVPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMV 439 (582)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHhcCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHH--
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QER-- 161 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~-- 161 (219)
+++.+|+||++||.+++.. .++...|+++|+|+++++++++.|+.++||++++|+||+++|++.....- .+.
T Consensus 440 ~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 517 (582)
T PRK05855 440 ERGTGGHIVNVASAAAYAP--SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEA 517 (582)
T ss_pred hcCCCcEEEEECChhhccC--CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhh
Confidence 8654589999999998733 57889999999999999999999999999999999999999998664321 111
Q ss_pred -HHHHHHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 162 -AVKLVREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
..... ...+..+..+|+ ++|+.+++.++.
T Consensus 518 ~~~~~~-~~~~~~~~~~p~-~va~~~~~~~~~ 547 (582)
T PRK05855 518 RRRGRA-DKLYQRRGYGPE-KVAKAIVDAVKR 547 (582)
T ss_pred hHHhhh-hhhccccCCCHH-HHHHHHHHHHHc
Confidence 01111 111222334566 999999999965
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-26 Score=177.85 Aligned_cols=178 Identities=19% Similarity=0.198 Sum_probs=144.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. +++.++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|.
T Consensus 54 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~ 130 (275)
T PRK05876 54 GFDVHGVMCDVRHR--EEVTHLADEAFRLLGHVDVVFSNAGIV-VGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLL 130 (275)
T ss_pred CCeEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 44688999999999 999999999999999999999999985 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH--HH--
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER--AV-- 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~-- 163 (219)
+++.+|+||++||..+..+ .++...|+++|+++.+|+++++.|+.++||++++++||.++|++......... ..
T Consensus 131 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 208 (275)
T PRK05876 131 EQGTGGHVVFTASFAGLVP--NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQS 208 (275)
T ss_pred hcCCCCEEEEeCChhhccC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCcccccc
Confidence 7654589999999988733 57889999999999999999999999999999999999999997643211000 00
Q ss_pred ---HHHHhhcCCCCCCCCchhHHHHHHHhcc
Q 027744 164 ---KLVREAAPLHRWLDVKNDLASTVIYLIS 191 (219)
Q Consensus 164 ---~~~~~~~~~~~~~~~~~dva~~~~~l~s 191 (219)
...........+.+|+ |+|+.++..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~-dva~~~~~ai~ 238 (275)
T PRK05876 209 STTGSPGPLPLQDDNLGVD-DIAQLTADAIL 238 (275)
T ss_pred ccccccccccccccCCCHH-HHHHHHHHHHH
Confidence 0000001112345666 99999987763
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=170.07 Aligned_cols=191 Identities=28% Similarity=0.416 Sum_probs=157.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
..++++.+|++|. +++..+++++.+.++++|++|||||.. ...++.+.+.++++.++++|+.+++.+++++.+.+.+
T Consensus 57 ~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 133 (249)
T PRK09135 57 GSAAALQADLLDP--DALPELVAACVAAFGRLDALVNNASSF-YPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRK 133 (249)
T ss_pred CceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhh
Confidence 4588999999999 999999999999999999999999985 4466677788999999999999999999999999876
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .+.++++++..+. . +.++...|+.+|++++.+++.+++++.+ ++++++++||++.|+............. ...
T Consensus 134 ~--~~~~~~~~~~~~~-~-~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~~~~~~~-~~~ 207 (249)
T PRK09135 134 Q--RGAIVNITDIHAE-R-PLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQA-ILA 207 (249)
T ss_pred C--CeEEEEEeChhhc-C-CCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCCHHHHHH-HHh
Confidence 5 4788888886664 2 2578889999999999999999999965 6999999999999998654333332222 224
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+..+..+++ |+++++.+++.+ ....+|+++++++|...
T Consensus 208 ~~~~~~~~~~~-d~a~~~~~~~~~-~~~~~g~~~~i~~g~~~ 247 (249)
T PRK09135 208 RTPLKRIGTPE-DIAEAVRFLLAD-ASFITGQILAVDGGRSL 247 (249)
T ss_pred cCCcCCCcCHH-HHHHHHHHHcCc-cccccCcEEEECCCeec
Confidence 45666667776 999999888875 45679999999999864
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=180.70 Aligned_cols=174 Identities=19% Similarity=0.248 Sum_probs=146.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++++|+
T Consensus 56 g~~~~~v~~Dv~d~--~~v~~~~~~~~~~~g~iD~lInnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~ 132 (334)
T PRK07109 56 GGEALAVVADVADA--EAVQAAADRAEEELGPIDTWVNNAMVT-VFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMR 132 (334)
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHCCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55788999999999 999999999999999999999999985 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC--CCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+++ .|+||++||..+... .+.+..|+++|+++++|+++++.|+.. .+|+++.|+||.+.|++...... ..
T Consensus 133 ~~~-~g~iV~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~-----~~ 204 (334)
T PRK07109 133 PRD-RGAIIQVGSALAYRS--IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS-----RL 204 (334)
T ss_pred hcC-CcEEEEeCChhhccC--CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh-----hc
Confidence 875 699999999998733 577899999999999999999999975 47999999999999987542110 01
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.....+..+..+|+ |+|++++++++..
T Consensus 205 ~~~~~~~~~~~~pe-~vA~~i~~~~~~~ 231 (334)
T PRK07109 205 PVEPQPVPPIYQPE-VVADAILYAAEHP 231 (334)
T ss_pred cccccCCCCCCCHH-HHHHHHHHHHhCC
Confidence 11123344556776 9999999999753
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=172.96 Aligned_cols=141 Identities=16% Similarity=0.257 Sum_probs=132.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
.++...++.||+++ ++++++.+.+++..+ ++-+||||||+....++.+-.+.+++++++++|+.|++.+++.++|+
T Consensus 75 s~rl~t~~LDVT~~--esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpL 152 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKP--ESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPL 152 (322)
T ss_pred CCcceeEeeccCCH--HHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 56888999999999 999999999998874 59999999998878899999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
++++ .||||++||..|..+ .|..+.|++||+|++.++.++++|+.+.||+|.+|.||...|++..
T Consensus 153 lr~a--rGRvVnvsS~~GR~~--~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 153 LRRA--RGRVVNVSSVLGRVA--LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred HHhc--cCeEEEecccccCcc--CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 9987 599999999999744 6899999999999999999999999999999999999999999886
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-25 Score=170.54 Aligned_cols=184 Identities=21% Similarity=0.289 Sum_probs=154.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++.++++++++++.+.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.+.+.|.
T Consensus 61 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~ 140 (247)
T PRK08945 61 GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL 140 (247)
T ss_pred CCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 34677888999743338999999999999999999999999865556777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++|+++||..+... .+.+..|+++|++++.++++++.++...||++++++||.+.|++.....+..
T Consensus 141 ~~~-~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~------- 210 (247)
T PRK08945 141 KSP-AASLVFTSSSVGRQG--RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE------- 210 (247)
T ss_pred hCC-CCEEEEEccHhhcCC--CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc-------
Confidence 876 689999999888633 5788899999999999999999999999999999999999998654332211
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
...++.+|+ |+++.+.+++++...+++|+++...
T Consensus 211 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK08945 211 ---DPQKLKTPE-DIMPLYLYLMGDDSRRKNGQSFDAQ 244 (247)
T ss_pred ---cccCCCCHH-HHHHHHHHHhCccccccCCeEEeCC
Confidence 112345666 9999999999998899999987654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-25 Score=171.14 Aligned_cols=186 Identities=19% Similarity=0.257 Sum_probs=148.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. +++.++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++.+++.+.++|+
T Consensus 45 ~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 122 (248)
T PRK10538 45 GDNLYIAQLDVRNR--AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV 122 (248)
T ss_pred ccceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 34688999999999 9999999999999999999999999753345677789999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-c-chHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-V-GQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~-~-~~~~~~~~ 165 (219)
+.+ .++||++||..+. .+ .++...|+++|++++.+++.++.++.+.||+++.|+||.+.|+..... . ......
T Consensus 123 ~~~-~~~iv~isS~~~~-~~-~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~-- 197 (248)
T PRK10538 123 ERN-HGHIINIGSTAGS-WP-YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA-- 197 (248)
T ss_pred hcC-CcEEEEECCcccC-CC-CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHH--
Confidence 765 6899999998876 22 577889999999999999999999999999999999999985544321 1 111111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEE
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i 202 (219)
. .........+|+ |+|++++++++......+++..
T Consensus 198 ~-~~~~~~~~~~~~-dvA~~~~~l~~~~~~~~~~~~~ 232 (248)
T PRK10538 198 E-KTYQNTVALTPE-DVSEAVWWVATLPAHVNINTLE 232 (248)
T ss_pred H-hhccccCCCCHH-HHHHHHHHHhcCCCcccchhhc
Confidence 0 111112234666 9999999999876665555543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-25 Score=175.34 Aligned_cols=195 Identities=15% Similarity=0.120 Sum_probs=146.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|+++. ++++++++++.+.++++|++|||||+..+..+....+.++|+.++++|+.+++.+++.++|+|+
T Consensus 52 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~ 129 (314)
T TIGR01289 52 KDSYTIMHLDLGSL--DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLK 129 (314)
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 45688899999999 9999999999888899999999999753333445678899999999999999999999999998
Q ss_pred hcC-CCCeEEEeeccccccc-------------------------------CCCCCcchhHHhHHHHHHHHHHHHHHhC-
Q 027744 88 ESK-AGGSIVFLTSIIGAER-------------------------------GLYPGAAAYGACAASIHQLVRTAAMEIG- 134 (219)
Q Consensus 88 ~~~-~~g~iv~iss~~~~~~-------------------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~- 134 (219)
+.+ ..|+||++||..+... .++.++.+|++||+|+..+++.+++++.
T Consensus 130 ~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~ 209 (314)
T TIGR01289 130 NSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHD 209 (314)
T ss_pred hCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhcc
Confidence 753 1489999999876411 0123457899999999999999999985
Q ss_pred CCCeEEEEeecCCc-cCCCCccccchHH-HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 135 KHKIRVNGIARGLH-LQDEYPIAVGQER-AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 135 ~~gi~v~~i~pG~v-~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
+.||++++|+||+| .|++......... ..... .....+.+.+++ +.|+.++.++.+.....+|..+..++
T Consensus 210 ~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~a~~l~~~~~~~~~~~~g~~~~~~~ 281 (314)
T TIGR01289 210 ETGITFASLYPGCIADTGLFREHVPLFRTLFPPF-QKYITKGYVSEE-EAGERLAQVVSDPKLKKSGVYWSWGN 281 (314)
T ss_pred CCCeEEEEecCCcccCCcccccccHHHHHHHHHH-HHHHhccccchh-hhhhhhHHhhcCcccCCCceeeecCC
Confidence 46899999999999 6888754221110 00001 111122345666 89999998877644445777776544
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=169.53 Aligned_cols=179 Identities=18% Similarity=0.215 Sum_probs=149.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++.++++++.+.++++|++|||+|.. ...++.+.+.++|+.++++|+.+++.+++.+++.|+
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 130 (241)
T PRK07454 54 GVKAAAYSIDLSNP--EAIAPGIAELLEQFGCPDVLINNAGMA-YTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMR 130 (241)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcc-CCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999985 556777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+..+ .+++..|+++|++++.++++++.++++.|+++++|+||++.|++.......
T Consensus 131 ~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-------- 199 (241)
T PRK07454 131 ARG-GGLIINVSSIAARNA--FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-------- 199 (241)
T ss_pred hcC-CcEEEEEccHHhCcC--CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--------
Confidence 765 689999999988632 678899999999999999999999999999999999999999985431111
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceE
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 201 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~ 201 (219)
......+...++ |+|+++.+++++....+.+..
T Consensus 200 ~~~~~~~~~~~~-~va~~~~~l~~~~~~~~~~~~ 232 (241)
T PRK07454 200 ADFDRSAMLSPE-QVAQTILHLAQLPPSAVIEDL 232 (241)
T ss_pred cccccccCCCHH-HHHHHHHHHHcCCccceeeeE
Confidence 111122335555 999999999997666565543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=166.68 Aligned_cols=164 Identities=18% Similarity=0.265 Sum_probs=136.6
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
.++||+++. +++++++++ ++++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.+.|.|++ .
T Consensus 35 ~~~~D~~~~--~~~~~~~~~----~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~ 104 (199)
T PRK07578 35 DVQVDITDP--ASIRALFEK----VGKVDAVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---G 104 (199)
T ss_pred ceEecCCCh--HHHHHHHHh----cCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C
Confidence 468999999 888888765 47899999999985 5677888899999999999999999999999999974 5
Q ss_pred CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCC
Q 027744 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL 172 (219)
Q Consensus 93 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~ 172 (219)
|+|+++||..+..+ .+++..|+++|+++++|+++++.|+ ++||+++.|+||++.|++.... ...+.
T Consensus 105 g~iv~iss~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~ 170 (199)
T PRK07578 105 GSFTLTSGILSDEP--IPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPG 170 (199)
T ss_pred CeEEEEcccccCCC--CCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCC
Confidence 89999999888633 5788999999999999999999999 8899999999999998763210 11222
Q ss_pred CCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 173 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.....++ |+|+.+..+++. ..+|+++.+
T Consensus 171 ~~~~~~~-~~a~~~~~~~~~---~~~g~~~~~ 198 (199)
T PRK07578 171 FEPVPAA-RVALAYVRSVEG---AQTGEVYKV 198 (199)
T ss_pred CCCCCHH-HHHHHHHHHhcc---ceeeEEecc
Confidence 3345665 999999999963 579998876
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-24 Score=172.14 Aligned_cols=178 Identities=20% Similarity=0.199 Sum_probs=146.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|+ +++.++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++
T Consensus 50 ~~~~~~~~D~~d~--~~~~~~~~~~~~~~~~~d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 126 (277)
T PRK06180 50 DRALARLLDVTDF--DAIDAVVADAEATFGPIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRA 126 (277)
T ss_pred CCeeEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCcc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 4688999999999 999999999999999999999999985 6677888999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----hHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAV 163 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~ 163 (219)
++ .++||++||..+.. + .+++..|+++|+++++++++++.++.+.|+++++++||.+.|++...... .+...
T Consensus 127 ~~-~~~iv~iSS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~ 203 (277)
T PRK06180 127 RR-RGHIVNITSMGGLI-T-MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYD 203 (277)
T ss_pred cC-CCEEEEEecccccC-C-CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHH
Confidence 65 68999999998873 3 57889999999999999999999999999999999999999986432111 11111
Q ss_pred H----H--HHhhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 164 K----L--VREAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 164 ~----~--~~~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
. . .....+..++.+|+ |+|+++++++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~l~~~ 238 (277)
T PRK06180 204 ALFGPIRQAREAKSGKQPGDPA-KAAQAILAAVESD 238 (277)
T ss_pred HHHHHHHHHHHhhccCCCCCHH-HHHHHHHHHHcCC
Confidence 1 0 01122344566777 9999999998653
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-25 Score=171.77 Aligned_cols=177 Identities=16% Similarity=0.139 Sum_probs=146.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ +++..+++++.+.++++|++|||||.. ....+.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 48 ~~~~~~~~~D~~~~--~~~~~~~~~i~~~~~~id~lI~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 124 (270)
T PRK05650 48 GGDGFYQRCDVRDY--SQLTALAQACEEKWGGIDVIVNNAGVA-SGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFK 124 (270)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 556788889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH-HHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER-AVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~ 166 (219)
+.+ .++||++||..+..+ .+....|+++|+++++++++++.|+.+.||+++.|+||+++|++......... .....
T Consensus 125 ~~~-~~~iv~vsS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 201 (270)
T PRK05650 125 RQK-SGRIVNIASMAGLMQ--GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQV 201 (270)
T ss_pred hCC-CCEEEEECChhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHH
Confidence 765 689999999988633 57889999999999999999999999999999999999999998765332111 11111
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.....+...+++ |+|+.++..+..
T Consensus 202 -~~~~~~~~~~~~-~vA~~i~~~l~~ 225 (270)
T PRK05650 202 -GKLLEKSPITAA-DIADYIYQQVAK 225 (270)
T ss_pred -HHHhhcCCCCHH-HHHHHHHHHHhC
Confidence 111112234565 999999998864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=167.62 Aligned_cols=184 Identities=24% Similarity=0.342 Sum_probs=157.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+..+.+|++|. +++.++++++.+.++++|++||++|.. ....+...+.+++++.+++|+.+++.+++.+.+.+.++
T Consensus 55 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 55 ALRIGGIDLVDP--QAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred CceEEEeecCCH--HHHHHHHHHHHHHhCCcCEEEECCccc-CcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 467788999999 999999999999999999999999975 55667778899999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .++||++||..+... .++...|+++|++++.+++.+++++.+.|++++.++||.+.|+......+..
T Consensus 132 ~-~~~iv~~sS~~~~~~--~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~--------- 199 (239)
T PRK12828 132 G-GGRIVNIGAGAALKA--GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA--------- 199 (239)
T ss_pred C-CCEEEEECchHhccC--CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCch---------
Confidence 5 689999999988633 4778899999999999999999999888999999999999998544322111
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..+..++ |+++.+.+++++...+++|+.+.+|||+.+
T Consensus 200 -~~~~~~~~~-dva~~~~~~l~~~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 200 -DFSRWVTPE-QIAAVIAFLLSDEAQAITGASIPVDGGVAL 238 (239)
T ss_pred -hhhcCCCHH-HHHHHHHHHhCcccccccceEEEecCCEeC
Confidence 123345666 999999999988777889999999999864
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-25 Score=172.02 Aligned_cols=166 Identities=18% Similarity=0.210 Sum_probs=143.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.||++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.+++++++++|+.+++.+++.++|.|.++
T Consensus 51 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 127 (273)
T PRK07825 51 LVVGGPLDVTDP--ASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR 127 (273)
T ss_pred cceEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 478899999999 999999999999999999999999986 66788888999999999999999999999999999887
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .|+||++||..+... .+++..|+++|+++.+++++++.|+.++||+++.|+||++.|++......
T Consensus 128 ~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~----------- 193 (273)
T PRK07825 128 G-RGHVVNVASLAGKIP--VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG----------- 193 (273)
T ss_pred C-CCEEEEEcCccccCC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------
Confidence 6 689999999988733 68889999999999999999999999999999999999999987654211
Q ss_pred cCCCCCCCCchhHHHHHHHhccCC
Q 027744 170 APLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.......+++ |+|+.++.++...
T Consensus 194 ~~~~~~~~~~-~va~~~~~~l~~~ 216 (273)
T PRK07825 194 AKGFKNVEPE-DVAAAIVGTVAKP 216 (273)
T ss_pred ccCCCCCCHH-HHHHHHHHHHhCC
Confidence 0111235565 9999999988653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-25 Score=175.65 Aligned_cols=189 Identities=15% Similarity=0.106 Sum_probs=145.1
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
++++++|++|. ++++++++++.+.++++|++|||||.... ....+.++|+..+++|+.+++.+++.++|.|++++
T Consensus 73 v~~~~~Dl~d~--~~v~~~~~~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~ 147 (315)
T PRK06196 73 VEVVMLDLADL--ESVRAFAERFLDSGRRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA 147 (315)
T ss_pred CeEEEccCCCH--HHHHHHHHHHHhcCCCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 78899999999 99999999999999999999999997532 23456788999999999999999999999998765
Q ss_pred CCCeEEEeeccccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 91 AGGSIVFLTSIIGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
.++||++||..+... .+++++..|+.+|++++.+++.+++++.++||++++|+||++.|++........
T Consensus 148 -~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~ 226 (315)
T PRK06196 148 -GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE 226 (315)
T ss_pred -CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh
Confidence 689999999765311 113456789999999999999999999999999999999999999865432221
Q ss_pred HHH-HHHH-hhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 161 RAV-KLVR-EAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 161 ~~~-~~~~-~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
... .... ...+++ ++.+|+ ++|.++++|++......+|..+..|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~~~~~g~~~~~~ 274 (315)
T PRK06196 227 QVALGWVDEHGNPIDPGFKTPA-QGAATQVWAATSPQLAGMGGLYCEDC 274 (315)
T ss_pred hhhhhhhhhhhhhhhhhcCCHh-HHHHHHHHHhcCCccCCCCCeEeCCC
Confidence 111 1110 112222 356676 99999999997544334455554454
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.7e-25 Score=171.86 Aligned_cols=179 Identities=19% Similarity=0.196 Sum_probs=147.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++++|++|. ++++++++.+.+.+|++|++|||||.. ....+.+.+.+++++++++|+.+++.+++.+++.|+
T Consensus 44 ~~~~~~~~~D~~d~--~~~~~~~~~~~~~~g~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 120 (270)
T PRK06179 44 IPGVELLELDVTDD--ASVQAAVDEVIARAGRIDVLVNNAGVG-LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR 120 (270)
T ss_pred cCCCeeEEeecCCH--HHHHHHHHHHHHhCCCCCEEEECCCCC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34688999999999 999999999999999999999999985 667788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch-------H
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------E 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------~ 160 (219)
+++ .++||++||..+... .+....|+++|++++.+++.++.|++++||++++++||++.|++....... .
T Consensus 121 ~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 197 (270)
T PRK06179 121 AQG-SGRIINISSVLGFLP--APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYD 197 (270)
T ss_pred hcC-CceEEEECCccccCC--CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhH
Confidence 876 689999999988633 577889999999999999999999999999999999999999976532210 0
Q ss_pred HH-HHHHH-hhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 161 RA-VKLVR-EAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 161 ~~-~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.. ..... ...+..+...|+ ++|+.++.+++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~va~~~~~~~~~~ 231 (270)
T PRK06179 198 RERAVVSKAVAKAVKKADAPE-VVADTVVKAALGP 231 (270)
T ss_pred HHHHHHHHHHHhccccCCCHH-HHHHHHHHHHcCC
Confidence 00 00000 112334445666 9999999999653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=167.24 Aligned_cols=189 Identities=26% Similarity=0.398 Sum_probs=157.1
Q ss_pred cceEEEEecCCc-cchhHHHHHHHHHHHHhCCCcEEEeccccCCCC-CCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEE-DREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
..+.+..+|+++ . ++++.+++.+.+.+|++|++|||||.. .. .++.+.+.++|++++++|+.+++.+++.+.|.+
T Consensus 57 ~~~~~~~~Dvs~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 133 (251)
T COG1028 57 GRAAAVAADVSDDE--ESVEALVAAAEEEFGRIDILVNNAGIA-GPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLM 133 (251)
T ss_pred CcEEEEEecCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 367888999998 8 999999999999999999999999986 55 488899999999999999999999999888888
Q ss_pred HhcCCCCeEEEeecccccccCCCCC-cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH-HH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPG-AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~-~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~ 164 (219)
++ . +||++||..+. .. ++ +..|+++|+|+.+|++.++.|+.+.||+++.|+||++.|++.......... ..
T Consensus 134 ~~---~-~Iv~isS~~~~-~~--~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~ 206 (251)
T COG1028 134 KK---Q-RIVNISSVAGL-GG--PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALK 206 (251)
T ss_pred hh---C-eEEEECCchhc-CC--CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHH
Confidence 83 3 99999999986 53 55 599999999999999999999999999999999999999988754333200 01
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQ 208 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~ 208 (219)
......+.++...|. +++..+.++.+.. ..+++|+.+.+|||+
T Consensus 207 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 250 (251)
T COG1028 207 RLAARIPLGRLGTPE-EVAAAVAFLASDEAASYITGQTLPVDGGL 250 (251)
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHcCcchhccccCCEEEeCCCC
Confidence 111111455667777 9999999988763 678899999999986
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=170.94 Aligned_cols=140 Identities=24% Similarity=0.219 Sum_probs=126.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++++.+|++|. ++++.+++++.+.+ +++|++|||||.. ...++.+.+.++|+.++++|+.+++.+++.++|.|++
T Consensus 48 ~~~~~~~Dl~d~--~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~ 124 (277)
T PRK05993 48 GLEAFQLDYAEP--ESIAALVAQVLELSGGRLDALFNNGAYG-QPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK 124 (277)
T ss_pred CceEEEccCCCH--HHHHHHHHHHHHHcCCCccEEEECCCcC-CCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh
Confidence 477899999999 99999999997776 6899999999985 5677888999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
++ .|+||++||..+..+ .++...|+++|+++++++++++.|+.++||++++|+||++.|++...
T Consensus 125 ~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 125 QG-QGRIVQCSSILGLVP--MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred cC-CCEEEEECChhhcCC--CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence 75 689999999988633 57789999999999999999999999999999999999999998653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=171.09 Aligned_cols=189 Identities=17% Similarity=0.165 Sum_probs=148.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|+++. +++..+++++.+.++++|++|||||.. ... . .+++..+++|+.+++.+++.+.+.|.
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~ 125 (248)
T PRK07806 55 GGRASAVGADLTDE--ESVAALMDTAREEFGGLDALVLNASGG-MES---G---MDEDYAMRLNRDAQRNLARAALPLMP 125 (248)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHhCCCCcEEEECCCCC-CCC---C---CCcceeeEeeeHHHHHHHHHHHhhcc
Confidence 34678999999999 999999999999999999999999864 211 1 12456789999999999999999985
Q ss_pred hcCCCCeEEEeeccccccc---CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAER---GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~---~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+ .++||++||..+... .+.+.+..|+++|++++.+++.++.++++.||+++++.||.+.|++............
T Consensus 126 ~---~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~ 202 (248)
T PRK07806 126 A---GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA 202 (248)
T ss_pred C---CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH
Confidence 3 479999999654311 1134567899999999999999999999999999999999999876543211000011
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......|.+++.+|+ |+|++++++++ +.+++|++++++||....
T Consensus 203 ~~~~~~~~~~~~~~~-dva~~~~~l~~--~~~~~g~~~~i~~~~~~~ 246 (248)
T PRK07806 203 IEARREAAGKLYTVS-EFAAEVARAVT--APVPSGHIEYVGGADYFL 246 (248)
T ss_pred HHHHHhhhcccCCHH-HHHHHHHHHhh--ccccCccEEEecCcccee
Confidence 111335677889998 99999999997 457899999999998754
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-24 Score=167.63 Aligned_cols=165 Identities=19% Similarity=0.240 Sum_probs=138.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|. +++.++++++.+.++++|++|||||.........+.+.++|+.++++|+.+++.+++.++|.|+++
T Consensus 51 ~~~~~~~Dl~~~--~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~ 128 (257)
T PRK07024 51 RVSVYAADVRDA--DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA 128 (257)
T ss_pred eeEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc
Confidence 789999999999 999999999999999999999999975322223337889999999999999999999999999877
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .++||++||..+.. + .+....|+++|++++.++++++.|+.++||++++++||++.|++.....
T Consensus 129 ~-~~~iv~isS~~~~~-~-~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------ 193 (257)
T PRK07024 129 R-RGTLVGIASVAGVR-G-LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------ 193 (257)
T ss_pred C-CCEEEEEechhhcC-C-CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------
Confidence 6 68999999998863 3 5778899999999999999999999999999999999999998754211
Q ss_pred cCCCCCCCCchhHHHHHHHhccC
Q 027744 170 APLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.+.....+|+ ++++.++..+..
T Consensus 194 ~~~~~~~~~~-~~a~~~~~~l~~ 215 (257)
T PRK07024 194 YPMPFLMDAD-RFAARAARAIAR 215 (257)
T ss_pred CCCCCccCHH-HHHHHHHHHHhC
Confidence 1111123455 999999988864
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-24 Score=167.92 Aligned_cols=192 Identities=17% Similarity=0.254 Sum_probs=153.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. ++++. ++++.+.++++|++|||||.. ....+.+.+.+++++.+++|+.+++.+++.+++.|+
T Consensus 53 ~~~~~~~~~D~~d~--~~~~~-~~~~~~~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (280)
T PRK06914 53 QQNIKVQQLDVTDQ--NSIHN-FQLVLKEIGRIDLLVNNAGYA-NGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMR 128 (280)
T ss_pred CCceeEEecCCCCH--HHHHH-HHHHHHhcCCeeEEEECCccc-ccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 99999 999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+.+ .++||++||..+. .+ .++...|+++|++++.++++++.++.++||+++.++||.++|++......
T Consensus 129 ~~~-~~~iv~vsS~~~~-~~-~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~ 205 (280)
T PRK06914 129 KQK-SGKIINISSISGR-VG-FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETT 205 (280)
T ss_pred hcC-CCEEEEECccccc-CC-CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccc
Confidence 765 6899999998776 33 57888999999999999999999999999999999999999997543211
Q ss_pred ---hHHHHHHHH-hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 ---QERAVKLVR-EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ---~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......... ...+.+++.+++ |+|+++++++++... +..++++.|..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~~---~~~~~~~~~~~~ 257 (280)
T PRK06914 206 SPYKEYMKKIQKHINSGSDTFGNPI-DVANLIVEIAESKRP---KLRYPIGKGVKL 257 (280)
T ss_pred cchHHHHHHHHHHHhhhhhccCCHH-HHHHHHHHHHcCCCC---CcccccCCchHH
Confidence 011111110 112345667777 999999999976433 246777766543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=163.44 Aligned_cols=178 Identities=21% Similarity=0.280 Sum_probs=145.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|+++. +++.++++++.+.++++|++|||||.. ...++.+.++++|++.+++|+.+++++++.+++.|.
T Consensus 58 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~ 134 (274)
T PRK07775 58 GGEAVAFPLDVTDP--DSVKSFVAQAEEALGEIEVLVSGAGDT-YFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI 134 (274)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999985 456777788999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH---HHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER---AVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---~~~ 164 (219)
+++ .++||++||..+... .++...|+++|++++.+++.+++++.+.||++++++||+++|++......... ...
T Consensus 135 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~ 211 (274)
T PRK07775 135 ERR-RGDLIFVGSDVALRQ--RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLED 211 (274)
T ss_pred hcC-CceEEEECChHhcCC--CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHH
Confidence 765 689999999887632 46778999999999999999999999889999999999999986543222111 011
Q ss_pred HHH-hhcCCCCCCCCchhHHHHHHHhccC
Q 027744 165 LVR-EAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 165 ~~~-~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
... .....+++..++ |+|++++++++.
T Consensus 212 ~~~~~~~~~~~~~~~~-dva~a~~~~~~~ 239 (274)
T PRK07775 212 WAKWGQARHDYFLRAS-DLARAITFVAET 239 (274)
T ss_pred HHHhcccccccccCHH-HHHHHHHHHhcC
Confidence 110 112234567777 999999999975
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=163.08 Aligned_cols=179 Identities=17% Similarity=0.221 Sum_probs=143.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHH-HHHHh---CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDK-ACQIL---GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~~~---g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++.++++|+++. +++++++++ +.+.+ +++|++|||+|...+..++.+.+.++|++.+++|+.+++.+++.+.
T Consensus 44 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (243)
T PRK07023 44 GERLAEVELDLSDA--AAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALA 121 (243)
T ss_pred CCeEEEEEeccCCH--HHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHH
Confidence 45788999999999 999998877 55555 3799999999986445677788999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch----
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---- 159 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---- 159 (219)
+.|.+++ .++||++||..+.. + .+++..|+++|++++++++.++.+ .+.||+++.|+||+++|++.......
T Consensus 122 ~~~~~~~-~~~iv~isS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~ 197 (243)
T PRK07023 122 QAASDAA-ERRILHISSGAARN-A-YAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEER 197 (243)
T ss_pred HHhhccC-CCEEEEEeChhhcC-C-CCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhccccc
Confidence 9998765 68999999998863 2 678899999999999999999999 77899999999999999875432110
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHH-HHHHhccCC
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLAS-TVIYLISDG 193 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~s~~ 193 (219)
......+....+.++...|+ |+|+ .+.+|+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~-~va~~~~~~l~~~~ 231 (243)
T PRK07023 198 FPMRERFRELKASGALSTPE-DAARRLIAYLLSDD 231 (243)
T ss_pred chHHHHHHHhhhcCCCCCHH-HHHHHHHHHHhccc
Confidence 01112223455677778887 9999 566777653
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-23 Score=166.25 Aligned_cols=168 Identities=16% Similarity=0.165 Sum_probs=137.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCc--CHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.+++++++|++|. +++.++++++.+.+|++|++|||||.. ...++.+. ++++++..+++|+.+++.+++.++|.
T Consensus 88 ~~~~~~~~~Dl~d~--~~v~~~~~~~~~~~g~id~li~~AG~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 164 (293)
T PRK05866 88 GGDAMAVPCDLSDL--DAVDALVADVEKRIGGVDILINNAGRS-IRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPG 164 (293)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999985 44444432 46889999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|++.+ .|+||++||..+. .++.+....|+++|+|+++++++++.|+.++||++++++||+++|++......
T Consensus 165 ~~~~~-~g~iv~isS~~~~-~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~------- 235 (293)
T PRK05866 165 MLERG-DGHIINVATWGVL-SEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA------- 235 (293)
T ss_pred HHhcC-CcEEEEECChhhc-CCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-------
Confidence 98765 6899999997664 32256778999999999999999999999999999999999999998753210
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.... ...+|+ ++|+.++..+..
T Consensus 236 ---~~~~-~~~~pe-~vA~~~~~~~~~ 257 (293)
T PRK05866 236 ---YDGL-PALTAD-EAAEWMVTAART 257 (293)
T ss_pred ---ccCC-CCCCHH-HHHHHHHHHHhc
Confidence 0011 124555 999999888753
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=162.16 Aligned_cols=174 Identities=18% Similarity=0.154 Sum_probs=143.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH-hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI-LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.+++++++|+++. +++.++++++.+. ++++|++|||||.. ....+.+.+.++++.++++|+.+++.+++.+.+.|
T Consensus 47 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 123 (260)
T PRK08267 47 AGNAWTGALDVTDR--AAWDAALADFAAATGGRLDVLFNNAGIL-RGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYL 123 (260)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45789999999999 9999999998877 78999999999986 55677888999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+.++ .++||++||..+... .+....|+.+|+++++++++++.++.++||++++++||++.|++.......... ...
T Consensus 124 ~~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~-~~~ 199 (260)
T PRK08267 124 KATP-GARVINTSSASAIYG--QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA-GST 199 (260)
T ss_pred HhCC-CCEEEEeCchhhCcC--CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh-hhH
Confidence 8765 689999999887633 577889999999999999999999999999999999999999987641111111 111
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
. ......+++ +++++++.++..
T Consensus 200 -~--~~~~~~~~~-~va~~~~~~~~~ 221 (260)
T PRK08267 200 -K--RLGVRLTPE-DVAEAVWAAVQH 221 (260)
T ss_pred -h--hccCCCCHH-HHHHHHHHHHhC
Confidence 1 112234565 999999999853
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=168.13 Aligned_cols=165 Identities=20% Similarity=0.159 Sum_probs=129.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.+++.+.+|+++. +.+.++++.+.++ ++|++|||||...+ ...+.+.+.+++++++++|+.+++.+++.++|
T Consensus 103 ~~~~~~~~~Dl~~~----~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 178 (320)
T PLN02780 103 KTQIKTVVVDFSGD----IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLP 178 (320)
T ss_pred CcEEEEEEEECCCC----cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45788999999852 2333444444444 46699999998533 24677889999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.|++++ .|+||++||.++...++.+....|+++|+++++++++++.|++++||+|++++||+++|++.....
T Consensus 179 ~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~------- 250 (320)
T PLN02780 179 GMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR------- 250 (320)
T ss_pred HHHhcC-CcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------
Confidence 998876 799999999988632224678999999999999999999999999999999999999999865210
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhcc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLIS 191 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s 191 (219)
... ...+|+ ++|+.++..+.
T Consensus 251 -----~~~-~~~~p~-~~A~~~~~~~~ 270 (320)
T PLN02780 251 -----SSF-LVPSSD-GYARAALRWVG 270 (320)
T ss_pred -----CCC-CCCCHH-HHHHHHHHHhC
Confidence 000 023555 89999888774
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=166.85 Aligned_cols=191 Identities=11% Similarity=0.069 Sum_probs=140.6
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++++||++|. ++++++++++.+.++++|++|||||.... +..+.+.++|+.++.+|+.+++.+++.++|.|
T Consensus 63 ~~~~v~~~~~Dl~d~--~sv~~~~~~~~~~~~~iD~li~nAG~~~~--~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l 138 (313)
T PRK05854 63 PDAKLSLRALDLSSL--ASVAALGEQLRAEGRPIHLLINNAGVMTP--PERQTTADGFELQFGTNHLGHFALTAHLLPLL 138 (313)
T ss_pred CCCceEEEEecCCCH--HHHHHHHHHHHHhCCCccEEEECCccccC--CccccCcccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 345789999999999 99999999999999999999999998532 33456789999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccC----------CCCCcchhHHhHHHHHHHHHHHHHHh--CCCCeEEEEeecCCccCCCCc
Q 027744 87 KESKAGGSIVFLTSIIGAERG----------LYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~----------~~~~~~~y~~sK~a~~~l~~~l~~e~--~~~gi~v~~i~pG~v~t~~~~ 154 (219)
++. .++||++||..+.... +++++..|+.||+|+..+++.+++++ ...||++++++||++.|++..
T Consensus 139 ~~~--~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~ 216 (313)
T PRK05854 139 RAG--RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA 216 (313)
T ss_pred HhC--CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence 864 5899999998765211 13456789999999999999999864 457899999999999999864
Q ss_pred cccc-----hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 155 IAVG-----QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 155 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.... ................+..+.++.+...++++..... .+|..+.-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~ 270 (313)
T PRK05854 217 ARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGP 270 (313)
T ss_pred cccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECC
Confidence 3211 0111111111111111223333888888887764322 24665543
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-24 Score=156.37 Aligned_cols=188 Identities=19% Similarity=0.196 Sum_probs=154.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCC--CcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.......|++.. .-..++++..++.++..|++|||||..++..... ..+.++|.+.+++|+.+.+.+.+.++|.++
T Consensus 55 ~~v~~~g~~~e~--~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk 132 (253)
T KOG1204|consen 55 DFVHVVGDITEE--QLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLK 132 (253)
T ss_pred CcceechHHHHH--HHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhc
Confidence 344455677765 6677888888888899999999999877666555 778899999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~ 163 (219)
+++..+.+||+||.++.. |+..|+.||.+|+|.+++.+.++.|-. .+|++..+.||.++|+|...... .+...
T Consensus 133 ~~p~~~~vVnvSS~aav~--p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l 209 (253)
T KOG1204|consen 133 KSPVNGNVVNVSSLAAVR--PFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADL 209 (253)
T ss_pred CCCccCeEEEecchhhhc--cccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHH
Confidence 875469999999999863 389999999999999999999999976 78999999999999998765432 33444
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
+.+.+....++..+|. ..|+.+..|+.... +++|+.+..
T Consensus 210 ~~f~el~~~~~ll~~~-~~a~~l~~L~e~~~-f~sG~~vdy 248 (253)
T KOG1204|consen 210 KMFKELKESGQLLDPQ-VTAKVLAKLLEKGD-FVSGQHVDY 248 (253)
T ss_pred HHHHHHHhcCCcCChh-hHHHHHHHHHHhcC-ccccccccc
Confidence 4555666677778887 99999999986543 899987754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.4e-23 Score=160.82 Aligned_cols=191 Identities=17% Similarity=0.221 Sum_probs=151.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. +++.++++++.+.++++|++|||||.. ...+..+.+.+++++.+++|+.+++.+++.++|+|++
T Consensus 48 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 124 (276)
T PRK06482 48 DRLWVLQLDVTDS--AAVRAVVDRAFAALGRIDVVVSNAGYG-LFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR 124 (276)
T ss_pred CceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4688999999999 999999999999999999999999986 5567777889999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--------hH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------QE 160 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~ 160 (219)
++ .++||++||..+... .++...|+++|++++.+++++++++++.|++++.++||.+.|++...... ..
T Consensus 125 ~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 201 (276)
T PRK06482 125 QG-GGRIVQVSSEGGQIA--YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDT 201 (276)
T ss_pred cC-CCEEEEEcCcccccC--CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccch
Confidence 65 689999999887532 57889999999999999999999999999999999999998887543211 00
Q ss_pred ---HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 ---RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...... ...+.....+++ |++++++..+... ..+..+++.+|...
T Consensus 202 ~~~~~~~~~-~~~~~~~~~d~~-~~~~a~~~~~~~~---~~~~~~~~g~~~~~ 249 (276)
T PRK06482 202 PVGDLRRAL-ADGSFAIPGDPQ-KMVQAMIASADQT---PAPRRLTLGSDAYA 249 (276)
T ss_pred hhHHHHHHH-hhccCCCCCCHH-HHHHHHHHHHcCC---CCCeEEecChHHHH
Confidence 111111 111222235666 9999999988533 23566888777544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=165.83 Aligned_cols=190 Identities=16% Similarity=0.102 Sum_probs=144.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||...+ ....+.++++..+++|+.+++.+++.+++.|+
T Consensus 66 ~~~~~~~~~Dl~d~--~~v~~~~~~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 66 GADVTLQELDLTSL--ASVRAAADALRAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 45788999999999 99999999999999999999999997532 23466788999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccC-----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEe--ecCCccCCCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERG-----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI--ARGLHLQDEYP 154 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i--~pG~v~t~~~~ 154 (219)
+.+ .++||++||..+...+ +.++...|+++|++++.+++.+++++++.|++++++ +||++.|++..
T Consensus 141 ~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~ 219 (306)
T PRK06197 141 PVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR 219 (306)
T ss_pred hCC-CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence 765 6899999998754211 134567899999999999999999998888777665 69999999876
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
..... .........+ .+..++++.+...++++.. ....+|..+..||+.
T Consensus 220 ~~~~~--~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~ 268 (306)
T PRK06197 220 NLPRA--LRPVATVLAP--LLAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG 268 (306)
T ss_pred cCcHH--HHHHHHHHHh--hhcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence 53221 1111111112 1234443666666666653 345688888877765
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=156.32 Aligned_cols=184 Identities=24% Similarity=0.306 Sum_probs=149.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++++++||+++. +++.++++++.+.++++|.+|+++|.. ...++. +.++++.++++|+.+++.+.+.++|.+.+
T Consensus 53 ~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~ii~~ag~~-~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 127 (238)
T PRK05786 53 GNIHYVVGDVSST--ESARNVIEKAAKVLNAIDGLVVTVGGY-VEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE 127 (238)
T ss_pred CCeEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEEcCCCc-CCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc
Confidence 3688999999999 999999999988889999999999864 323332 33889999999999999999999999864
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++++|++||..+.. ++.+....|+++|++++.+++.++.++...|+++++++||++.|++... .... .
T Consensus 128 ---~~~iv~~ss~~~~~-~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~~----~ 195 (238)
T PRK05786 128 ---GSSIVLVSSMSGIY-KASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNWK----K 195 (238)
T ss_pred ---CCEEEEEecchhcc-cCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhhh----h
Confidence 58999999987642 2256778899999999999999999999899999999999999986432 1111 1
Q ss_pred hcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+.+ ....++ |+++.+.+++++....++|+++.+|||..+
T Consensus 196 ~~~~~~~~~~~~-~va~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (238)
T PRK05786 196 LRKLGDDMAPPE-DFAKVIIWLLTDEADWVDGVVIPVDGGARL 237 (238)
T ss_pred hccccCCCCCHH-HHHHHHHHHhcccccCccCCEEEECCcccc
Confidence 11222 234444 999999999998788899999999998764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=156.19 Aligned_cols=169 Identities=21% Similarity=0.315 Sum_probs=143.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++++ +++.++++++.+.++++|++|||+|.. ....+.+.++++|++.+++|+.+++.+++.+.+.|.
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 131 (239)
T PRK07666 55 GVKVVIATADVSDY--EEVTAAIEQLKNELGSIDILINNAGIS-KFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI 131 (239)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCccEEEEcCccc-cCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44788999999999 999999999999999999999999985 556677889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .+++|++||..+... .++...|+.+|+++..+++.++.++.+.|++++.++||.+.|++.......
T Consensus 132 ~~~-~~~iv~~ss~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-------- 200 (239)
T PRK07666 132 ERQ-SGDIINISSTAGQKG--AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-------- 200 (239)
T ss_pred hCC-CcEEEEEcchhhccC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------
Confidence 765 689999999888633 577889999999999999999999999999999999999999875432110
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
...+ .....++ |+|+.+..+++.
T Consensus 201 ~~~~-~~~~~~~-~~a~~~~~~l~~ 223 (239)
T PRK07666 201 DGNP-DKVMQPE-DLAEFIVAQLKL 223 (239)
T ss_pred ccCC-CCCCCHH-HHHHHHHHHHhC
Confidence 1111 2335555 999999999964
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-23 Score=159.64 Aligned_cols=176 Identities=18% Similarity=0.297 Sum_probs=143.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCc-CHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV-GEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.+++++.+|++|. +++..+++++.++++++|++|||+|.. ....+.+. +.+++++.+++|+.+++.+++.+.+.|
T Consensus 49 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 125 (263)
T PRK06181 49 GGEALVVPTDVSDA--EACERLIEAAVARFGGIDILVNNAGIT-MWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHL 125 (263)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcc-cccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 44788999999999 999999999999999999999999985 55667777 889999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
.+. .++||++||..+... .+++..|+++|++++++++.++.++.+.+++++++.||++.|++.......... ...
T Consensus 126 ~~~--~~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~-~~~ 200 (263)
T PRK06181 126 KAS--RGQIVVVSSLAGLTG--VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK-PLG 200 (263)
T ss_pred Hhc--CCEEEEEecccccCC--CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc-ccc
Confidence 764 489999999888633 577899999999999999999999999999999999999999976543211100 000
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.......++.+|+ |+|+.+.++++.
T Consensus 201 ~~~~~~~~~~~~~-dva~~i~~~~~~ 225 (263)
T PRK06181 201 KSPMQESKIMSAE-ECAEAILPAIAR 225 (263)
T ss_pred cccccccCCCCHH-HHHHHHHHHhhC
Confidence 0001123556776 999999999964
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-23 Score=159.14 Aligned_cols=163 Identities=19% Similarity=0.269 Sum_probs=133.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++++|++|. +++.++++++.+ ++++|++|||+|...+. .....+.++..+++++|+.+++.+++.+++.|++
T Consensus 60 ~~v~~~~~D~~~~--~~~~~~~~~~~~-~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~ 135 (253)
T PRK07904 60 SSVEVIDFDALDT--DSHPKVIDAAFA-GGDVDVAIVAFGLLGDA-EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA 135 (253)
T ss_pred CceEEEEecCCCh--HHHHHHHHHHHh-cCCCCEEEEeeecCCch-hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 3789999999999 999999999886 58999999999985321 1112245566788999999999999999999998
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .++||++||..+... .++...|+++|+++.+|+++++.|+.++||+++.++||++.|++......
T Consensus 136 ~~-~~~iv~isS~~g~~~--~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~---------- 202 (253)
T PRK07904 136 QG-FGQIIAMSSVAGERV--RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE---------- 202 (253)
T ss_pred cC-CceEEEEechhhcCC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC----------
Confidence 76 699999999987532 46778899999999999999999999999999999999999987653211
Q ss_pred hcCCCCCCCCchhHHHHHHHhccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.+ ...+++ ++|+.++..+..
T Consensus 203 -~~--~~~~~~-~~A~~i~~~~~~ 222 (253)
T PRK07904 203 -AP--LTVDKE-DVAKLAVTAVAK 222 (253)
T ss_pred -CC--CCCCHH-HHHHHHHHHHHc
Confidence 01 123555 999999998864
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=159.29 Aligned_cols=170 Identities=19% Similarity=0.250 Sum_probs=141.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++..+++.+.+ ++++|++|||||.. ...++.+.+.+++++.+++|+.+++.+++.+.++|.
T Consensus 52 ~~~~~~~~~D~~d~--~~~~~~~~~~~~-~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 127 (263)
T PRK09072 52 PGRHRWVVADLTSE--AGREAVLARARE-MGGINVLINNAGVN-HFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLR 127 (263)
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHh-cCCCCEEEECCCCC-CccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999876 78999999999985 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++|+++||..+.. + .++...|+++|+++.+++++++.++.+.||+++.++||+++|++...... ..
T Consensus 128 ~~~-~~~iv~isS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~-----~~-- 197 (263)
T PRK09072 128 AQP-SAMVVNVGSTFGSI-G-YPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ-----AL-- 197 (263)
T ss_pred hcC-CCEEEEecChhhCc-C-CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc-----cc--
Confidence 765 68999999988763 3 57788999999999999999999999999999999999999987543211 00
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
......+..+++ |+|+.+++++..
T Consensus 198 ~~~~~~~~~~~~-~va~~i~~~~~~ 221 (263)
T PRK09072 198 NRALGNAMDDPE-DVAAAVLQAIEK 221 (263)
T ss_pred cccccCCCCCHH-HHHHHHHHHHhC
Confidence 001112345666 999999999964
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=157.27 Aligned_cols=166 Identities=23% Similarity=0.222 Sum_probs=140.7
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.+++++++|+++. +++.++++++.+.++++|++|||||+. ...++...+.+.+++.+++|+.+++.+++.+.+.|
T Consensus 51 ~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 127 (248)
T PRK08251 51 PGIKVAVAALDVNDH--DQVFEVFAEFRDELGGLDRVIVNAGIG-KGARLGTGKFWANKATAETNFVAALAQCEAAMEIF 127 (248)
T ss_pred CCceEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356789999999999 999999999999999999999999985 55667778889999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCC-CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYP-GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~-~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
++.+ .++||++||..+. .+ .+ +...|+.+|++++.+++.++.++...|++++.++||+++|++......
T Consensus 128 ~~~~-~~~iv~~sS~~~~-~~-~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~------- 197 (248)
T PRK08251 128 REQG-SGHLVLISSVSAV-RG-LPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS------- 197 (248)
T ss_pred HhcC-CCeEEEEeccccc-cC-CCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------
Confidence 8765 6899999998876 33 34 468999999999999999999999889999999999999987654211
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.....+++ +.++.++..+..
T Consensus 198 ------~~~~~~~~-~~a~~i~~~~~~ 217 (248)
T PRK08251 198 ------TPFMVDTE-TGVKALVKAIEK 217 (248)
T ss_pred ------CCccCCHH-HHHHHHHHHHhc
Confidence 11123455 899998887754
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-22 Score=158.68 Aligned_cols=139 Identities=22% Similarity=0.260 Sum_probs=125.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|+++. ++++++++.+.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++.
T Consensus 45 ~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 121 (274)
T PRK05693 45 GFTAVQLDVNDG--AALARLAEELEAEHGGLDVLINNAGYG-AMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS 121 (274)
T ss_pred CCeEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence 367889999999 999999999999999999999999985 56778888999999999999999999999999999764
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
.|+||++||..+... .+....|+++|++++.++++++.|+.+.||++++++||.+.|++...
T Consensus 122 --~g~iv~isS~~~~~~--~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~ 183 (274)
T PRK05693 122 --RGLVVNIGSVSGVLV--TPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN 183 (274)
T ss_pred --CCEEEEECCccccCC--CCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence 489999999888633 57788999999999999999999999999999999999999997654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=161.50 Aligned_cols=192 Identities=11% Similarity=0.083 Sum_probs=140.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||+..........+.++|+.++++|+.+++.+++.++|.|+
T Consensus 54 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 131 (322)
T PRK07453 54 PDSYTIIHIDLGDL--DSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLK 131 (322)
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45788999999999 9999999998877788999999999853333345678899999999999999999999999998
Q ss_pred hcCC-CCeEEEeeccccccc---------------------------------CCCCCcchhHHhHHHHHHHHHHHHHHh
Q 027744 88 ESKA-GGSIVFLTSIIGAER---------------------------------GLYPGAAAYGACAASIHQLVRTAAMEI 133 (219)
Q Consensus 88 ~~~~-~g~iv~iss~~~~~~---------------------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~ 133 (219)
+++. .++||++||...... .++.+...|+.||.+...+++.+++++
T Consensus 132 ~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~ 211 (322)
T PRK07453 132 KSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRY 211 (322)
T ss_pred hCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhh
Confidence 7642 269999999754210 012345789999999999999999999
Q ss_pred C-CCCeEEEEeecCCc-cCCCCccccchH-HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEE
Q 027744 134 G-KHKIRVNGIARGLH-LQDEYPIAVGQE-RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIY 203 (219)
Q Consensus 134 ~-~~gi~v~~i~pG~v-~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~ 203 (219)
. ..||++++++||.| .|++.+...... .....+ .........++. ..++.+++++.+.....+|..+.
T Consensus 212 ~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~y~~ 282 (322)
T PRK07453 212 HESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWF-QKNITGGYVSQE-LAGERVAQVVADPEFAQSGVHWS 282 (322)
T ss_pred cccCCeEEEEecCCcccCCcccccCCHHHHHHHHHH-HHHHhhceecHH-HHhhHHHHhhcCcccCCCCceee
Confidence 5 46899999999999 477754422111 111111 111111223444 66777777776544445777765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-22 Score=158.15 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=127.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. ++++++++.+.+.++++|++|||||.. ...++.+.+.++|+..+++|+.+++.+++.++|.|+
T Consensus 54 ~~~~~~~~~D~~d~--~~~~~~~~~~~~~~g~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (287)
T PRK06194 54 GAEVLGVRTDVSDA--AQVEALADAALERFGAVHLLFNNAGVG-AGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLML 130 (287)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 45788899999999 999999999999999999999999986 557777889999999999999999999999999998
Q ss_pred hcCCC-----CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC--CCeEEEEeecCCccCCCCcc
Q 027744 88 ESKAG-----GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 88 ~~~~~-----g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~--~gi~v~~i~pG~v~t~~~~~ 155 (219)
++... |+||++||..+... .++.+.|+++|++++.++++++.++.. .+||++.+.||++.|++...
T Consensus 131 ~~~~~~~~~~g~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~ 203 (287)
T PRK06194 131 AAAEKDPAYEGHIVNTASMAGLLA--PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS 203 (287)
T ss_pred hcCCCCCCCCeEEEEeCChhhccC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence 76532 79999999988733 477889999999999999999999874 57999999999999987654
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-22 Score=153.80 Aligned_cols=164 Identities=17% Similarity=0.177 Sum_probs=137.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++++ ++++++++++.+ .+|++|||+|.. ...++.+.+.+++.+.+++|+.+++.+++.+.+.|.
T Consensus 50 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~---~~d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 123 (243)
T PRK07102 50 AVAVSTHELDILDT--ASHAAFLDSLPA---LPDIVLIAVGTL-GDQAACEADPALALREFRTNFEGPIALLTLLANRFE 123 (243)
T ss_pred CCeEEEEecCCCCh--HHHHHHHHHHhh---cCCEEEECCcCC-CCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999888754 479999999975 456677889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.+ .++|+++||..+.. + .+....|+++|+++++++++++.++.++||++++++||.++|++.....
T Consensus 124 ~~~-~~~iv~~sS~~~~~-~-~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~---------- 190 (243)
T PRK07102 124 ARG-SGTIVGISSVAGDR-G-RASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK---------- 190 (243)
T ss_pred hCC-CCEEEEEecccccC-C-CCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC----------
Confidence 765 68999999988763 3 5777899999999999999999999999999999999999998654311
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.+.....+++ ++++.++.+++..
T Consensus 191 --~~~~~~~~~~-~~a~~i~~~~~~~ 213 (243)
T PRK07102 191 --LPGPLTAQPE-EVAKDIFRAIEKG 213 (243)
T ss_pred --CCccccCCHH-HHHHHHHHHHhCC
Confidence 1222234555 9999999998753
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=146.22 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=125.3
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC--CCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP--LQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
....++...||+.|. ++.+++++++.++++.++++|||||+... -.+ .+...++.++-+.+|+.+|.++++.++|
T Consensus 48 ~~p~~~t~v~Dv~d~--~~~~~lvewLkk~~P~lNvliNNAGIqr~-~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lp 124 (245)
T COG3967 48 ENPEIHTEVCDVADR--DSRRELVEWLKKEYPNLNVLINNAGIQRN-EDLTGAEDLLDDAEQEIATNLLAPIRLTALLLP 124 (245)
T ss_pred cCcchheeeecccch--hhHHHHHHHHHhhCCchheeeecccccch-hhccCCcchhhHHHHHHHHhhhhHHHHHHHHHH
Confidence 456788999999999 99999999999999999999999999743 333 3456678899999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
++++++ .+.||++||..+..+ ....+.||++|+|++.++.+|+.+++..+|+|.-+.|..|+|+
T Consensus 125 hl~~q~-~a~IInVSSGLafvP--m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 125 HLLRQP-EATIINVSSGLAFVP--MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHhCC-CceEEEeccccccCc--ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 999987 799999999999744 5788999999999999999999999999999999999999997
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=150.84 Aligned_cols=141 Identities=19% Similarity=0.190 Sum_probs=128.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHH-HhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQ-ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.....+.++|++++ +++..+..++++ .+|++|.++||||.. ...+..+.+.+..++.+++|+.|.+.++|++...+
T Consensus 51 ~~gl~~~kLDV~~~--~~V~~v~~evr~~~~Gkld~L~NNAG~~-C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~l 127 (289)
T KOG1209|consen 51 QFGLKPYKLDVSKP--EEVVTVSGEVRANPDGKLDLLYNNAGQS-CTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFL 127 (289)
T ss_pred hhCCeeEEeccCCh--HHHHHHHHHHhhCCCCceEEEEcCCCCC-cccccccCCHHHHHhhhccceeeeehHHHHHHHHH
Confidence 44578999999999 999999999998 689999999999985 67888999999999999999999999999999656
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
.+. .|.|||++|..+..+ ++..+.|+++|+|+..+++.|+-|+++.||+|..+-||-|.|+....
T Consensus 128 ika--KGtIVnvgSl~~~vp--fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 128 IKA--KGTIVNVGSLAGVVP--FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HHc--cceEEEecceeEEec--cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 554 599999999999855 68899999999999999999999999999999999999999998765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.5e-22 Score=172.68 Aligned_cols=167 Identities=18% Similarity=0.161 Sum_probs=137.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCc--CHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.+++++++|++|. ++++++++++.+.+|++|++|||||.. ....+.+. ..+++++++++|+.+++.+++.++|.
T Consensus 419 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 495 (657)
T PRK07201 419 GGTAHAYTCDLTDS--AAVDHTVKDILAEHGHVDYLVNNAGRS-IRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPH 495 (657)
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999999 999999999999999999999999974 33333322 35889999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|++++ .|+||++||..+... .+..+.|+++|+++++++++++.|+.+.||++++|+||+++|++......
T Consensus 496 ~~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~------- 565 (657)
T PRK07201 496 MRERR-FGHVVNVSSIGVQTN--APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR------- 565 (657)
T ss_pred hhhcC-CCEEEEECChhhcCC--CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-------
Confidence 98875 689999999988632 57788999999999999999999999999999999999999998653210
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.......+|+ ++|+.++..+..
T Consensus 566 ----~~~~~~~~~~-~~a~~i~~~~~~ 587 (657)
T PRK07201 566 ----YNNVPTISPE-EAADMVVRAIVE 587 (657)
T ss_pred ----ccCCCCCCHH-HHHHHHHHHHHh
Confidence 0011224555 899998887643
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=146.98 Aligned_cols=175 Identities=19% Similarity=0.298 Sum_probs=144.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++++|+++. +++..+++++.+.++++|++||++|.. ...++.+.+.+++++.+++|+.+++.+++++++.|++
T Consensus 54 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 130 (237)
T PRK07326 54 GNVLGLAADVRDE--ADVQRAVDAIVAAFGGLDVLIANAGVG-HFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR 130 (237)
T ss_pred CcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 5688999999999 999999999999999999999999975 5567778899999999999999999999999999843
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .++||++||..+... ......|+++|++++++++.++.++...|++++.++||.+.|++.......+.
T Consensus 131 -~-~~~iv~~ss~~~~~~--~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~------- 199 (237)
T PRK07326 131 -G-GGYIINISSLAGTNF--FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEKD------- 199 (237)
T ss_pred -C-CeEEEEECChhhccC--CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchhh-------
Confidence 3 589999999877522 56788999999999999999999999999999999999999987644321110
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEE
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i 202 (219)
.....++ |+++.+.++++.....+.++..
T Consensus 200 ----~~~~~~~-d~a~~~~~~l~~~~~~~~~~~~ 228 (237)
T PRK07326 200 ----AWKIQPE-DIAQLVLDLLKMPPRTLPSKIE 228 (237)
T ss_pred ----hccCCHH-HHHHHHHHHHhCCccccccceE
Confidence 0013455 9999999999877665555433
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=148.99 Aligned_cols=160 Identities=14% Similarity=0.167 Sum_probs=130.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++++++||+++. ++++++++++.. .+|.+|||||.. ...+..+.+.++|++++++|+.+++++++.+.|+|.+
T Consensus 46 ~~~~~~~~D~~~~--~~~~~~~~~~~~---~~d~~i~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 119 (240)
T PRK06101 46 ANIFTLAFDVTDH--PGTKAALSQLPF---IPELWIFNAGDC-EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC 119 (240)
T ss_pred CCCeEEEeeCCCH--HHHHHHHHhccc---CCCEEEEcCccc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4688999999999 999998887642 479999999864 3344456789999999999999999999999999864
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+++|+++||..+... .+....|+++|++++++++.++.|+.++||++++++||++.|++......
T Consensus 120 ---~~~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~---------- 184 (240)
T PRK06101 120 ---GHRVVIVGSIASELA--LPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF---------- 184 (240)
T ss_pred ---CCeEEEEechhhccC--CCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC----------
Confidence 578999999887633 57888999999999999999999999999999999999999997653210
Q ss_pred hcCCCCCCCCchhHHHHHHHhccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
......+++ ++++.++..+..
T Consensus 185 --~~~~~~~~~-~~a~~i~~~i~~ 205 (240)
T PRK06101 185 --AMPMIITVE-QASQEIRAQLAR 205 (240)
T ss_pred --CCCcccCHH-HHHHHHHHHHhc
Confidence 011123454 899999887754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=154.61 Aligned_cols=184 Identities=17% Similarity=0.195 Sum_probs=139.8
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++++++||+++. ++++++++++.+.++++|++|||||++.+.. ..+.|.++.++.+|..|++.+++.++|.|
T Consensus 84 ~~~~i~~~~lDLssl--~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~---~~t~DG~E~~~~tN~lg~flLt~lLlp~l 158 (314)
T KOG1208|consen 84 ANQKIRVIQLDLSSL--KSVRKFAEEFKKKEGPLDVLINNAGVMAPPF---SLTKDGLELTFATNYLGHFLLTELLLPLL 158 (314)
T ss_pred CCCceEEEECCCCCH--HHHHHHHHHHHhcCCCccEEEeCcccccCCc---ccCccchhheehhhhHHHHHHHHHHHHHH
Confidence 456789999999999 9999999999999999999999999974333 66778999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccc----------cC-CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 87 KESKAGGSIVFLTSIIGAE----------RG-LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~----------~~-~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
+.+. ++|||++||..+.. .. .+....+|+.||.++..+++.+++.+.+ ||.++.++||.+.|+...+
T Consensus 159 k~s~-~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 159 KRSA-PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred hhCC-CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence 9886 59999999987510 00 0223346999999999999999999988 9999999999999994444
Q ss_pred ccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceE
Q 027744 156 AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTT 201 (219)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~ 201 (219)
. .. ..............-+++ +.|++.++++.. .-..++|..
T Consensus 237 ~--~~-~~~~l~~~l~~~~~ks~~-~ga~t~~~~a~~p~~~~~sg~y 279 (314)
T KOG1208|consen 237 V--NL-LLRLLAKKLSWPLTKSPE-QGAATTCYAALSPELEGVSGKY 279 (314)
T ss_pred c--hH-HHHHHHHHHHHHhccCHH-HHhhheehhccCccccCccccc
Confidence 1 11 111111111111112444 889998887754 334455554
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-21 Score=147.30 Aligned_cols=171 Identities=16% Similarity=0.220 Sum_probs=143.4
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.+..+|+.|. +++..+++++++..+.+|.+|+|||.. ..+.+.+.++++++..|++|..++++++++.++.|++..
T Consensus 86 v~~~S~d~~~Y--~~v~~~~~~l~~~~~~~d~l~~cAG~~-v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~ 162 (331)
T KOG1210|consen 86 VSYKSVDVIDY--DSVSKVIEELRDLEGPIDNLFCCAGVA-VPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKRE 162 (331)
T ss_pred eeEeccccccH--HHHHHHHhhhhhccCCcceEEEecCcc-cccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccc
Confidence 66889999888 999999999999999999999999985 789999999999999999999999999999999999876
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHHHhh
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLVREA 169 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~ 169 (219)
..|+|+++||.++.. + ..++++|+++|+|+.+|+..+++|+.+.||+|....|+.+.||.+.+... .+......
T Consensus 163 ~~g~I~~vsS~~a~~-~-i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii--- 237 (331)
T KOG1210|consen 163 HLGRIILVSSQLAML-G-IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKII--- 237 (331)
T ss_pred cCcEEEEehhhhhhc-C-cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeee---
Confidence 567999999999973 3 78999999999999999999999999999999999999999997665322 11111111
Q ss_pred cCCCCCCCCchhHHHHHHHhc
Q 027744 170 APLHRWLDVKNDLASTVIYLI 190 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~ 190 (219)
........+ |++|.+++.-+
T Consensus 238 ~g~ss~~~~-e~~a~~~~~~~ 257 (331)
T KOG1210|consen 238 EGGSSVIKC-EEMAKAIVKGM 257 (331)
T ss_pred cCCCCCcCH-HHHHHHHHhHH
Confidence 111122344 48888887755
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=143.44 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=118.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
++.++.+|++|. ++++++++.+.+ +++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.+++.+++
T Consensus 46 ~~~~~~~D~~d~--~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 121 (225)
T PRK08177 46 GVHIEKLDMNDP--ASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP 121 (225)
T ss_pred ccceEEcCCCCH--HHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh
Confidence 577889999999 999999988753 579999999998532 345677889999999999999999999999999875
Q ss_pred cCCCCeEEEeecccccccC-CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 89 SKAGGSIVFLTSIIGAERG-LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~-~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
. .++++++||..+.... +...+..|+++|++++.+++.++++++++||+++.|+||+++|++...
T Consensus 122 ~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~ 187 (225)
T PRK08177 122 G--QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD 187 (225)
T ss_pred c--CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence 3 4789999997765221 124667899999999999999999999999999999999999998643
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=145.69 Aligned_cols=179 Identities=15% Similarity=0.155 Sum_probs=141.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++||++|. +++..+++.+.+.. +++|++|||+|.. ...++.+.+.+++++.+++|+.+++.+++.+++.|++
T Consensus 46 ~~~~~~~D~~~~--~~~~~~~~~i~~~~~~~~~~ii~~ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~ 122 (256)
T PRK08017 46 GFTGILLDLDDP--ESVERAADEVIALTDNRLYGLFNNAGFG-VYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP 122 (256)
T ss_pred CCeEEEeecCCH--HHHHHHHHHHHHhcCCCCeEEEECCCCC-CccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 367899999999 89999999887754 6899999999975 5567778899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
.+ .++|+++||..+. .+ .+....|+++|++++.++++++.++..++++++.++||.+.|++................
T Consensus 123 ~~-~~~iv~~ss~~~~-~~-~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~ 199 (256)
T PRK08017 123 HG-EGRIVMTSSVMGL-IS-TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENP 199 (256)
T ss_pred cC-CCEEEEEcCcccc-cC-CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhh
Confidence 65 6899999998776 33 578889999999999999999999999999999999999999876543221100000000
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSR 195 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~ 195 (219)
....+.+..++ |+++.+..+++....
T Consensus 200 ~~~~~~~~~~~-d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 200 GIAARFTLGPE-AVVPKLRHALESPKP 225 (256)
T ss_pred HHHhhcCCCHH-HHHHHHHHHHhCCCC
Confidence 00112235666 999999999976443
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=136.75 Aligned_cols=117 Identities=24% Similarity=0.440 Sum_probs=108.3
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++++++||+++. ++++++++++.+.++++|++|||+|.. ...++.+++.++|++++++|+.+++.+.+.+.|
T Consensus 50 ~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-- 124 (167)
T PF00106_consen 50 PGAKITFIECDLSDP--ESIRALIEEVIKRFGPLDILINNAGIF-SDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-- 124 (167)
T ss_dssp TTSEEEEEESETTSH--HHHHHHHHHHHHHHSSESEEEEECSCT-TSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--
T ss_pred ccccccccccccccc--ccccccccccccccccccccccccccc-cccccccccchhhhhccccccceeeeeeehhee--
Confidence 357899999999999 999999999999999999999999997 578889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHh
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~ 133 (219)
++ +|+||++||..+..+ .+.+..|+++|+|+++|++++++|+
T Consensus 125 --~~-~g~iv~~sS~~~~~~--~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 125 --QG-GGKIVNISSIAGVRG--SPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp --HT-TEEEEEEEEGGGTSS--STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred --cc-ccceEEecchhhccC--CCCChhHHHHHHHHHHHHHHHHHhc
Confidence 22 799999999999743 6899999999999999999999986
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=139.74 Aligned_cols=138 Identities=20% Similarity=0.286 Sum_probs=121.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.++++. ++++|++||++|......++.+.+.++|++.+++|+.+++.+++.+.+.++
T Consensus 48 ~~~~~~~~~D~~~~--~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (238)
T PRK08264 48 GPRVVPLQLDVTDP--ASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLA 121 (238)
T ss_pred CCceEEEEecCCCH--HHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35788999999999 887776654 478999999999844566778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
+.+ .++++++||..+.. + .++...|+.+|++++.+++.++.++.+.|++++.++||.++|++..
T Consensus 122 ~~~-~~~~v~~sS~~~~~-~-~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~ 185 (238)
T PRK08264 122 ANG-GGAIVNVLSVLSWV-N-FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA 185 (238)
T ss_pred hcC-CCEEEEEcChhhcc-C-CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc
Confidence 765 68999999988763 3 5778899999999999999999999999999999999999998754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-19 Score=139.05 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=118.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. +++.++++ +++|++|||||.. ...++.+.+.++|+..+.+|+.+++.+++.+++.+.
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~------~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 120 (257)
T PRK09291 50 GLALRVEKLDLTDA--IDRAQAAE------WDVDVLLNNAGIG-EAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMV 120 (257)
T ss_pred CCcceEEEeeCCCH--HHHHHHhc------CCCCEEEECCCcC-CCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34688999999998 77766543 4799999999986 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
+++ .++||++||..+... .++...|+++|++++.+++.++.++.+.||+++.|+||++.|++..
T Consensus 121 ~~~-~~~iv~~SS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 121 ARG-KGKVVFTSSMAGLIT--GPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred hcC-CceEEEEcChhhccC--CCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 876 589999999887633 4678899999999999999999999999999999999999998754
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-19 Score=136.39 Aligned_cols=171 Identities=20% Similarity=0.234 Sum_probs=134.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+.++++|+++. ++++++++++.. +++|++|||+|... ......+.+.++|++.+++|+.+++.+++++.+.|.+.
T Consensus 46 ~~~~~~D~~~~--~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (222)
T PRK06953 46 AEALALDVADP--ASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA 121 (222)
T ss_pred ceEEEecCCCH--HHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc
Confidence 56899999999 899888776632 47999999999752 23455677899999999999999999999999998663
Q ss_pred CCCCeEEEeecccccccCC-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 90 KAGGSIVFLTSIIGAERGL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
.|+++++||..+..... ......|+++|++++.+++.++.++. +++++.|+||+++|++....
T Consensus 122 --~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~------------ 185 (222)
T PRK06953 122 --GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQ------------ 185 (222)
T ss_pred --CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCC------------
Confidence 58999999987652210 11223699999999999999998864 69999999999999985421
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
. ...++ +.+..+..+++......+|.++..|++
T Consensus 186 -~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T PRK06953 186 -A----ALDPA-QSVAGMRRVIAQATRRDNGRFFQYDGV 218 (222)
T ss_pred -C----CCCHH-HHHHHHHHHHHhcCcccCceEEeeCCc
Confidence 0 12333 788888887776667788999988876
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-19 Score=134.10 Aligned_cols=175 Identities=22% Similarity=0.264 Sum_probs=138.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|++|. +++.++++++ +++|++||++|.. ...+..+.+.++|.+++++|+.+++.+++.+++.++++
T Consensus 48 ~~~~~~~D~~~~--~~~~~~~~~~----~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 120 (227)
T PRK08219 48 GATPFPVDLTDP--EAIAAAVEQL----GRLDVLVHNAGVA-DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA 120 (227)
T ss_pred cceEEecCCCCH--HHHHHHHHhc----CCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 478899999998 8887777643 5799999999985 45667778899999999999999999999999998875
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
.++++++||..+... .++...|+.+|.+++.+++.++.++... ++++.+.||.+.++........ ....
T Consensus 121 --~~~~v~~ss~~~~~~--~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~------~~~~ 189 (227)
T PRK08219 121 --HGHVVFINSGAGLRA--NPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ------EGGE 189 (227)
T ss_pred --CCeEEEEcchHhcCc--CCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh------hccc
Confidence 489999999888633 5778899999999999999999988766 9999999999888754332111 0012
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.+.+++..++ |+++.++++++.. ..|.+.+++.
T Consensus 190 ~~~~~~~~~~-dva~~~~~~l~~~---~~~~~~~~~~ 222 (227)
T PRK08219 190 YDPERYLRPE-TVAKAVRFAVDAP---PDAHITEVVV 222 (227)
T ss_pred cCCCCCCCHH-HHHHHHHHHHcCC---CCCccceEEE
Confidence 2334567777 9999999999653 2456655543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.7e-18 Score=130.22 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=108.9
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC-
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK- 90 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~- 90 (219)
..+.+|+++. +++.+ .++++|++|||||.. .. .+.+.++|++++++|+.+++.+++.++|.|++++
T Consensus 61 ~~~~~D~~~~--~~~~~-------~~~~iDilVnnAG~~-~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 127 (245)
T PRK12367 61 EWIKWECGKE--ESLDK-------QLASLDVLILNHGIN-PG---GRQDPENINKALEINALSSWRLLELFEDIALNNNS 127 (245)
T ss_pred eEEEeeCCCH--HHHHH-------hcCCCCEEEECCccC-Cc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc
Confidence 6789999998 66543 457899999999974 22 3467899999999999999999999999997631
Q ss_pred -CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHH---HHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 91 -AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV---RTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 91 -~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~---~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
.++.+++.+|.++. .. +....|++||+|+..+. +.++.|+.+.+++++.+.||.++|++...
T Consensus 128 ~~g~~iiv~ss~a~~-~~--~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~----------- 193 (245)
T PRK12367 128 QIPKEIWVNTSEAEI-QP--ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI----------- 193 (245)
T ss_pred CCCeEEEEEeccccc-CC--CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc-----------
Confidence 12345455555543 22 35678999999986544 44444557889999999999999886310
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
...+|+ ++|+.+++.++.
T Consensus 194 -------~~~~~~-~vA~~i~~~~~~ 211 (245)
T PRK12367 194 -------GIMSAD-FVAKQILDQANL 211 (245)
T ss_pred -------CCCCHH-HHHHHHHHHHhc
Confidence 124555 999999999854
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8e-19 Score=135.38 Aligned_cols=141 Identities=19% Similarity=0.204 Sum_probs=122.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.+++++.+|.++. ++ ..+++.+.+. .+-+||||+|... .+..+.+.+.+.+++.+++|+.+...+++.++|
T Consensus 98 ~vev~~i~~Dft~~--~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp 172 (312)
T KOG1014|consen 98 KVEVRIIAIDFTKG--DE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILP 172 (312)
T ss_pred CcEEEEEEEecCCC--ch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhh
Confidence 36799999999998 44 3444444443 4678999999864 367788888889999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
.|.+++ .|.|+++||.++..+ .|.++.|+++|+.+..|+++|..|+..+||.|..+.|.+|-|.|....
T Consensus 173 ~M~~r~-~G~IvnigS~ag~~p--~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~ 241 (312)
T KOG1014|consen 173 GMVERK-KGIIVNIGSFAGLIP--TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR 241 (312)
T ss_pred hhhcCC-CceEEEecccccccc--ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence 999976 799999999999744 799999999999999999999999999999999999999999987643
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=156.54 Aligned_cols=134 Identities=12% Similarity=0.063 Sum_probs=119.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
|.+++++.||++|. ++++++++++.+. +++|+||||||+. ....+.+.+.++|++.+++|+.|++.+++++.+.+
T Consensus 2093 G~~v~y~~~DVtD~--~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~- 2167 (2582)
T TIGR02813 2093 GASAEYASADVTNS--VSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN- 2167 (2582)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 56889999999999 9999999999887 6899999999986 66788999999999999999999999999987654
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
.++||++||..+... .+++..|+++|++++.+++.+++++.. +|+++|+||.++|+|..
T Consensus 2168 ----~~~IV~~SSvag~~G--~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2168 ----IKLLALFSSAAGFYG--NTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred ----CCeEEEEechhhcCC--CCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCccc
Confidence 357999999999743 578899999999999999999998754 89999999999998864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.2e-15 Score=109.65 Aligned_cols=128 Identities=20% Similarity=0.255 Sum_probs=109.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++++ +++.++++++...++++|++||++|.. ...++.+.+.++|++++++|+.+++.+.+.+.+
T Consensus 52 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--- 125 (180)
T smart00822 52 GAEVTVVACDVADR--AALAAALAAIPARLGPLRGVIHAAGVL-DDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--- 125 (180)
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCeeEEEEccccC-CccccccCCHHHHHHhhchHhHHHHHHHHHhcc---
Confidence 45778899999998 999999999988899999999999985 556677889999999999999999999998832
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
.+ .++++++||..+... .+.+..|+++|++++.+++.++. .|+++..+.||++.
T Consensus 126 -~~-~~~ii~~ss~~~~~~--~~~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 126 -LP-LDFFVLFSSVAGVLG--NPGQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred -CC-cceEEEEccHHHhcC--CCCchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence 22 589999999888633 57788999999999999987654 47889999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=117.74 Aligned_cols=146 Identities=14% Similarity=0.140 Sum_probs=107.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++..+.+|++|+ +++.+. ++++|++|||||.. .. .+.+.+++++++++|+.+++.+++.++|.|+++
T Consensus 225 ~v~~v~~Dvsd~--~~v~~~-------l~~IDiLInnAGi~-~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~ 291 (406)
T PRK07424 225 PVKTLHWQVGQE--AALAEL-------LEKVDILIINHGIN-VH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTN 291 (406)
T ss_pred CeEEEEeeCCCH--HHHHHH-------hCCCCEEEECCCcC-CC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467889999998 665443 46799999999974 22 357889999999999999999999999999875
Q ss_pred CC---CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 90 KA---GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 90 ~~---~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+. ++.++++|+ ++. . .+..+.|+++|+|+.+++. +.++. .++.+..+.||.+.|++..
T Consensus 292 ~~~~~~~iiVn~Ss-a~~--~-~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------------ 352 (406)
T PRK07424 292 RDKATKEVWVNTSE-AEV--N-PAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------------ 352 (406)
T ss_pred CCCCCCeEEEEEcc-ccc--c-CCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc------------
Confidence 41 134566554 332 2 2345789999999999985 44443 3567778889998887631
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGS 194 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~ 194 (219)
. ...+|+ ++|+.+++.++...
T Consensus 353 -----~-~~~spe-~vA~~il~~i~~~~ 373 (406)
T PRK07424 353 -----I-GVMSAD-WVAKQILKLAKRDF 373 (406)
T ss_pred -----C-CCCCHH-HHHHHHHHHHHCCC
Confidence 0 124555 99999999986543
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.51 E-value=7e-13 Score=107.02 Aligned_cols=168 Identities=15% Similarity=0.131 Sum_probs=117.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+||... .+..+.+ .+..+++|+.++.++++++.+.
T Consensus 53 ~~~~~v~~Dl~d~--~~l~~~~~-------~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~--- 115 (324)
T TIGR03589 53 PCLRFFIGDVRDK--ERLTRALR-------GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAIDN--- 115 (324)
T ss_pred CcEEEEEccCCCH--HHHHHHHh-------cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHHc---
Confidence 4688999999998 77777654 4899999999742 1222233 3468999999999999998752
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .++||++||.... .+...|+++|++.+.+++.++.+.+..|+++++++||.+.++... . ...+......
T Consensus 116 -~-~~~iV~~SS~~~~-----~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~--i~~~~~~~~~ 185 (324)
T TIGR03589 116 -G-VKRVVALSTDKAA-----NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-V--VPFFKSLKEE 185 (324)
T ss_pred -C-CCEEEEEeCCCCC-----CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-c--HHHHHHHHHh
Confidence 2 4789999996542 345789999999999999998888888999999999999987432 1 1111111111
Q ss_pred h---cCC------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 169 A---APL------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 169 ~---~~~------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. .++ +.+...+ |++++++.++... ..|+++ +.+|.
T Consensus 186 ~~~~~~i~~~~~~r~~i~v~-D~a~a~~~al~~~---~~~~~~-~~~~~ 229 (324)
T TIGR03589 186 GVTELPITDPRMTRFWITLE-QGVNFVLKSLERM---LGGEIF-VPKIP 229 (324)
T ss_pred CCCCeeeCCCCceEeeEEHH-HHHHHHHHHHhhC---CCCCEE-ccCCC
Confidence 1 122 1234555 9999999888532 245665 44443
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.2e-13 Score=113.43 Aligned_cols=172 Identities=15% Similarity=0.137 Sum_probs=119.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.. .++++|+||||+|.. . . ...+|...+.+|+.+..++++++...
T Consensus 138 ~~v~iV~gDLtD~--esI~~-------aLggiDiVVn~AG~~-~-~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a--- 198 (576)
T PLN03209 138 EKLEIVECDLEKP--DQIGP-------ALGNASVVICCIGAS-E-K-----EVFDVTGPYRIDYLATKNLVDAATVA--- 198 (576)
T ss_pred CceEEEEecCCCH--HHHHH-------HhcCCCEEEEccccc-c-c-----cccchhhHHHHHHHHHHHHHHHHHHh---
Confidence 3588999999998 66644 346799999999974 2 1 12247778899999999998887643
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .++||++||..+...+ .+. ..|. +|+++..+.+.+..++...||++++|+||++.|++..... ..... ....
T Consensus 199 -g-VgRIV~VSSiga~~~g-~p~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~-t~~v~-~~~~ 271 (576)
T PLN03209 199 -K-VNHFILVTSLGTNKVG-FPA-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE-THNLT-LSEE 271 (576)
T ss_pred -C-CCEEEEEccchhcccC-ccc-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc-cccee-eccc
Confidence 2 5799999998764222 122 2243 7888888888888989889999999999999887543210 11111 1112
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
..++++....+ |||+.+++++++... -.+++|.+-+|-
T Consensus 272 d~~~gr~isre-DVA~vVvfLasd~~a-s~~kvvevi~~~ 309 (576)
T PLN03209 272 DTLFGGQVSNL-QVAELMACMAKNRRL-SYCKVVEVIAET 309 (576)
T ss_pred cccCCCccCHH-HHHHHHHHHHcCchh-ccceEEEEEeCC
Confidence 24556666776 999999999985321 237777776554
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=100.90 Aligned_cols=183 Identities=17% Similarity=0.134 Sum_probs=131.4
Q ss_pred CCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 5 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+....+..+++.|+.|. +.+.+++++- .+|++||-|+-.+... +..+-+..+++|+.|++.+++++..
T Consensus 47 ~~~~~~~~fv~~DI~D~--~~v~~~~~~~-----~~D~VvhfAAESHVDR-----SI~~P~~Fi~TNv~GT~~LLEaar~ 114 (340)
T COG1088 47 VEDSPRYRFVQGDICDR--ELVDRLFKEY-----QPDAVVHFAAESHVDR-----SIDGPAPFIQTNVVGTYTLLEAARK 114 (340)
T ss_pred hhcCCCceEEeccccCH--HHHHHHHHhc-----CCCeEEEechhccccc-----cccChhhhhhcchHHHHHHHHHHHH
Confidence 34567899999999998 8888887753 6899999999764433 4445567799999999999999987
Q ss_pred HHHhcCCCCeEEEeeccccc-----------ccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 85 RMKESKAGGSIVFLTSIIGA-----------ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~-----------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+..+ -|++.||+-..+ +..++.+.+.|++||++...|+|++.+.+ |+.+.+.++.--.+|.+
T Consensus 115 ~~~~----frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyq 187 (340)
T COG1088 115 YWGK----FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQ 187 (340)
T ss_pred hccc----ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCc
Confidence 7532 368999876533 23346788999999999999999999986 78888888887777765
Q ss_pred ccccc-hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 154 PIAVG-QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 154 ~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....- +....... ...++. .+...+ |-+.++...+.. ..-|++++++||.-..
T Consensus 188 fpEKlIP~~I~nal-~g~~lpvYGdG~~iRDWl~Ve-Dh~~ai~~Vl~k---g~~GE~YNIgg~~E~~ 250 (340)
T COG1088 188 FPEKLIPLMIINAL-LGKPLPVYGDGLQIRDWLYVE-DHCRAIDLVLTK---GKIGETYNIGGGNERT 250 (340)
T ss_pred CchhhhHHHHHHHH-cCCCCceecCCcceeeeEEeH-hHHHHHHHHHhc---CcCCceEEeCCCccch
Confidence 43211 11221111 222222 233444 889999888854 2349999999997543
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-12 Score=104.82 Aligned_cols=174 Identities=16% Similarity=0.210 Sum_probs=120.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|+++. +++.++++ ++|++||+||.. .. ..+.+++...+++|+.+++++++++.+.+.
T Consensus 56 ~~~~~~~~D~~d~--~~~~~~~~-------~~d~vih~A~~~-~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~- 120 (325)
T PLN02989 56 ERLKLFKADLLDE--GSFELAID-------GCETVFHTASPV-AI----TVKTDPQVELINPAVNGTINVLRTCTKVSS- 120 (325)
T ss_pred CceEEEeCCCCCc--hHHHHHHc-------CCCEEEEeCCCC-CC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-
Confidence 4688999999998 77777664 489999999964 21 233456788999999999999999877531
Q ss_pred cCCCCeEEEeecccccccCC-----C-------C--------CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 89 SKAGGSIVFLTSIIGAERGL-----Y-------P--------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~-----~-------~--------~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
.++||++||..++.... . + ....|+.+|.+.+.+++.+.++. |+.+++++|+.+
T Consensus 121 ---~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~v 194 (325)
T PLN02989 121 ---VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLV 194 (325)
T ss_pred ---ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCce
Confidence 46899999987642110 0 0 12469999999999999887764 799999999999
Q ss_pred cCCCCcccc--chHHHHHHHHhhcCC----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 149 LQDEYPIAV--GQERAVKLVREAAPL----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 149 ~t~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
.++...... .............+. +.+...+ |+|++++.++.... . +..++++|+
T Consensus 195 yGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~-Dva~a~~~~l~~~~--~-~~~~ni~~~ 255 (325)
T PLN02989 195 TGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVR-DVALAHVKALETPS--A-NGRYIIDGP 255 (325)
T ss_pred eCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHH-HHHHHHHHHhcCcc--c-CceEEEecC
Confidence 998754321 111222222122222 2344456 99999998885432 2 346788654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.4e-12 Score=103.58 Aligned_cols=183 Identities=15% Similarity=0.115 Sum_probs=125.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. ++++++++. .++|+|||+||.... ..+.++++..+++|+.++..+++++.+.|..
T Consensus 51 ~~~~~~~~Dl~d~--~~~~~~~~~-----~~~D~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~ 118 (355)
T PRK10217 51 ERFAFEKVDICDR--AELARVFTE-----HQPDCVMHLAAESHV-----DRSIDGPAAFIETNIVGTYTLLEAARAYWNA 118 (355)
T ss_pred CceEEEECCCcCh--HHHHHHHhh-----cCCCEEEECCcccCc-----chhhhChHHHHHHhhHHHHHHHHHHHHhhhc
Confidence 4577889999998 888887764 259999999997421 2334567889999999999999999876421
Q ss_pred ---c-CCCCeEEEeeccccccc-----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 89 ---S-KAGGSIVFLTSIIGAER-----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 89 ---~-~~~g~iv~iss~~~~~~-----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
. ....++|++||...+.. .+..+...|+.+|.+.+.+++.++++. ++++..++|+.+.++..
T Consensus 119 ~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 119 LTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYH 195 (355)
T ss_pred ccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCC
Confidence 1 11258999999654311 112356789999999999999988775 68889999999888764
Q ss_pred cccc-chHHHHHHHHhh-cC-------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 154 PIAV-GQERAVKLVREA-AP-------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 154 ~~~~-~~~~~~~~~~~~-~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.... ............ .+ ...+...+ |+++++..++.. ...|+++++.+|..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~-D~a~a~~~~~~~---~~~~~~yni~~~~~~ 257 (355)
T PRK10217 196 FPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVE-DHARALYCVATT---GKVGETYNIGGHNER 257 (355)
T ss_pred CcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHH-HHHHHHHHHHhc---CCCCCeEEeCCCCcc
Confidence 2111 011111111111 11 12245555 999999888854 235789999988764
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-13 Score=101.37 Aligned_cols=180 Identities=13% Similarity=0.133 Sum_probs=139.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC--------------------------CCCcCH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD--------------------------PLQVGE 61 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~--------------------------~~~~~~ 61 (219)
..+++++.+|+++. .++.++..++.++|.++|.+..|||++..++- ....+.
T Consensus 60 ~i~~~yvlvD~sNm--~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~ 137 (341)
T KOG1478|consen 60 TIEVTYVLVDVSNM--QSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISA 137 (341)
T ss_pred eeEEEEEEEehhhH--HHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecc
Confidence 45789999999999 99999999999999999999999998632211 123466
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCC-------CCCcchhHHhHHHHHHHHHHHHHHhC
Q 027744 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL-------YPGAAAYGACAASIHQLVRTAAMEIG 134 (219)
Q Consensus 62 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~-------~~~~~~y~~sK~a~~~l~~~l~~e~~ 134 (219)
+++...++.|+.|++.+.+.+.|++..++ +..+|.+||..+..... ..+..+|..||.+..-+.-.+-+.+.
T Consensus 138 D~lg~iFetnVFGhfyli~~l~pll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~ 216 (341)
T KOG1478|consen 138 DGLGEIFETNVFGHFYLIRELEPLLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK 216 (341)
T ss_pred cchhhHhhhcccchhhhHhhhhhHhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc
Confidence 88999999999999999999999999876 56999999998863210 25678899999999999999999999
Q ss_pred CCCeEEEEeecCCccCCCCccccchHHHHHHHHhh-------cCCCCCCCCchhHHHHHHHhccC
Q 027744 135 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA-------APLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 135 ~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
+.|+.-.+++||...|.+...........-..... .|.. ..+|- ..|.+.+|+.-.
T Consensus 217 ~~g~~qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh-~id~y-~aa~A~vw~~l~ 279 (341)
T KOG1478|consen 217 PLGINQYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWH-NIDPY-KAANAPVWVTLA 279 (341)
T ss_pred ccchhhhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCccc-ccCcc-ccccchhhhhhc
Confidence 99999999999999998887765543322221111 1111 13343 567777776643
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.5e-12 Score=102.27 Aligned_cols=172 Identities=13% Similarity=0.046 Sum_probs=117.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC----------------C---------------
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD----------------P--------------- 56 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~----------------~--------------- 56 (219)
+..+..+.||+++. ++++++++++.+.+|++|+||||+|......+ +
T Consensus 102 G~~a~~i~~DVss~--E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~ 179 (398)
T PRK13656 102 GLYAKSINGDAFSD--EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEV 179 (398)
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEE
Confidence 45678899999999 99999999999999999999999997522110 1
Q ss_pred --CCcCHHHHHHHHHhhhchH---HHHHHHH--HHHHHhcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHH
Q 027744 57 --LQVGEDEFKKLVKINFVAP---WFLLKAV--GRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVR 127 (219)
Q Consensus 57 --~~~~~~~~~~~~~~n~~~~---~~l~~~~--~~~l~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~ 127 (219)
...+.++++..+++ .|. ..+.+++ .+.|.. +++++..|...+... .|.+ +..+.+|++|+.-++
T Consensus 180 s~~~~~~~ei~~Tv~v--Mggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t--~p~Y~~g~mG~AKa~LE~~~r 252 (398)
T PRK13656 180 TVEPATEEEIADTVKV--MGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELT--HPIYWDGTIGKAKKDLDRTAL 252 (398)
T ss_pred EEeeCCHHHHHHHHHh--hccchHHHHHHHHHhcccccC---CcEEEEEecCCccee--ecccCCchHHHHHHHHHHHHH
Confidence 12444555554443 333 3333333 344432 689999999776533 4555 588999999999999
Q ss_pred HHHHHhCCCCeEEEEeecCCccCCCCccccchHHH-HHHHHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA-VKLVREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 128 ~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.|+.++++.|+|+|++..|.+.|........-+.. ...++-+... ++= |.+.+.+..|..+
T Consensus 253 ~La~~L~~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk~~---g~h-e~~ieq~~rl~~~ 314 (398)
T PRK13656 253 ALNEKLAAKGGDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMKEK---GTH-EGCIEQIYRLFSE 314 (398)
T ss_pred HHHHHhhhcCCEEEEEecCcccchhhhcCCCcHHHHHHHHHHHHhc---CCC-CChHHHHHHHHHH
Confidence 99999999999999999999999876665443222 2222222221 122 3666666666643
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.9e-13 Score=97.91 Aligned_cols=127 Identities=24% Similarity=0.299 Sum_probs=96.1
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++++++||++|+ ++++++++++.+.+++++++||+||.. ....+.+.+.++++..+...+.+..++.+.+.+
T Consensus 51 ~g~~v~~~~~Dv~d~--~~v~~~~~~~~~~~~~i~gVih~ag~~-~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-- 125 (181)
T PF08659_consen 51 AGARVEYVQCDVTDP--EAVAAALAQLRQRFGPIDGVIHAAGVL-ADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-- 125 (181)
T ss_dssp TT-EEEEEE--TTSH--HHHHHHHHTSHTTSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred CCCceeeeccCccCH--HHHHHHHHHHHhccCCcceeeeeeeee-cccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--
Confidence 367899999999999 999999999999999999999999986 677889999999999999999999999988765
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
.+ -..+|++||..+. .+ .+++..|+++.+.++.|++..++. |..+.+|+-|.
T Consensus 126 --~~-l~~~i~~SSis~~-~G-~~gq~~YaaAN~~lda~a~~~~~~----g~~~~sI~wg~ 177 (181)
T PF08659_consen 126 --RP-LDFFILFSSISSL-LG-GPGQSAYAAANAFLDALARQRRSR----GLPAVSINWGA 177 (181)
T ss_dssp --TT-TSEEEEEEEHHHH-TT--TTBHHHHHHHHHHHHHHHHHHHT----TSEEEEEEE-E
T ss_pred --CC-CCeEEEECChhHh-cc-CcchHhHHHHHHHHHHHHHHHHhC----CCCEEEEEccc
Confidence 12 4689999999987 44 689999999999999999976553 56677776654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.7e-12 Score=101.39 Aligned_cols=181 Identities=12% Similarity=0.028 Sum_probs=121.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|+++. +++.+++++. ++|++||+|+.... ..+.+++...+++|+.+++.+++++...
T Consensus 53 ~~~~~~~Dl~~~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---- 116 (349)
T TIGR02622 53 KIEDHFGDIRDA--AKLRKAIAEF-----KPEIVFHLAAQPLV-----RKSYADPLETFETNVMGTVNLLEAIRAI---- 116 (349)
T ss_pred CceEEEccCCCH--HHHHHHHhhc-----CCCEEEECCccccc-----ccchhCHHHHHHHhHHHHHHHHHHHHhc----
Confidence 577899999998 8888887753 58999999996311 2344667788999999999999987431
Q ss_pred CCCCeEEEeeccccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhCC----CCeEEEEeecCCccCCCCcc
Q 027744 90 KAGGSIVFLTSIIGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIGK----HKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~----~gi~v~~i~pG~v~t~~~~~ 155 (219)
+..+++|++||...+.. .+..+...|+.+|.+.+.+++.+++++.+ +|++++.++|+.+.++....
T Consensus 117 ~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~ 196 (349)
T TIGR02622 117 GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA 196 (349)
T ss_pred CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch
Confidence 11368999999754311 01245678999999999999999988755 48999999999999875321
Q ss_pred c-cchHHHHHHHHhhcC--------CCCCCCCchhHHHHHHHhccCCCC--cccceEEEecCC
Q 027744 156 A-VGQERAVKLVREAAP--------LHRWLDVKNDLASTVIYLISDGSR--YMTGTTIYVDGA 207 (219)
Q Consensus 156 ~-~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~s~~~~--~~~G~~i~~dgG 207 (219)
. ..............+ .+.+...+ |++++++.++..... ...|+++++.+|
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~-D~a~a~~~~~~~~~~~~~~~~~~yni~s~ 258 (349)
T TIGR02622 197 EDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVL-EPLSGYLLLAEKLFTGQAEFAGAWNFGPR 258 (349)
T ss_pred hhhhhHHHHHHHhcCCCeEECCCCcccceeeHH-HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence 1 001111111111111 12233444 999998877642111 123678999765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-11 Score=97.75 Aligned_cols=179 Identities=16% Similarity=0.132 Sum_probs=121.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|+ +++.++++.. ++|++||+|+... . ..+.+.++..+++|+.++..+++.+...+.
T Consensus 50 ~~~~~~~~Dl~~~--~~~~~~~~~~-----~~d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~- 116 (317)
T TIGR01181 50 PRYRFVKGDIGDR--ELVSRLFTEH-----QPDAVVHFAAESH-V----DRSISGPAAFIETNVVGTYTLLEAVRKYWH- 116 (317)
T ss_pred CCcEEEEcCCcCH--HHHHHHHhhc-----CCCEEEEcccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 3678899999999 8888877643 5899999999752 1 123345677899999999999988765432
Q ss_pred cCCCCeEEEeeccccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-
Q 027744 89 SKAGGSIVFLTSIIGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV- 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~- 157 (219)
..+++++||...+.. .+..+...|+.+|.+.+.+++.++++. ++++..++|+.+.++......
T Consensus 117 ---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~~~ 190 (317)
T TIGR01181 117 ---EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPEKL 190 (317)
T ss_pred ---CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcccH
Confidence 347999998653210 112244579999999999999987764 789999999998887543211
Q ss_pred chHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......... ...+.. .+...+ |+++++..++... ..|+++++.+|..+.
T Consensus 191 ~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~-D~a~~~~~~~~~~---~~~~~~~~~~~~~~s 248 (317)
T TIGR01181 191 IPLMITNAL-AGKPLPVYGDGQQVRDWLYVE-DHCRAIYLVLEKG---RVGETYNIGGGNERT 248 (317)
T ss_pred HHHHHHHHh-cCCCceEeCCCceEEeeEEHH-HHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence 111111111 111111 123344 9999999888542 357889998876543
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-11 Score=97.85 Aligned_cols=183 Identities=16% Similarity=0.131 Sum_probs=121.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.+++++ .++|++||+|+..... ......+..+++|+.++..+++++.+.|..
T Consensus 50 ~~~~~~~~Dl~d~--~~~~~~~~~-----~~~d~vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~ 117 (352)
T PRK10084 50 ERYVFEHADICDR--AELDRIFAQ-----HQPDAVMHLAAESHVD-----RSITGPAAFIETNIVGTYVLLEAARNYWSA 117 (352)
T ss_pred CceEEEEecCCCH--HHHHHHHHh-----cCCCEEEECCcccCCc-----chhcCchhhhhhhhHHHHHHHHHHHHhccc
Confidence 4578899999998 888888765 2699999999974211 112334678999999999999999887643
Q ss_pred c----CCCCeEEEeeccccccc-------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 027744 89 S----KAGGSIVFLTSIIGAER-------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145 (219)
Q Consensus 89 ~----~~~g~iv~iss~~~~~~-------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~p 145 (219)
. +...++|++||...+.. .+..+...|+.+|.+.+.+++.+++++ |+.+..++|
T Consensus 118 ~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~ 194 (352)
T PRK10084 118 LDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNC 194 (352)
T ss_pred cccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEec
Confidence 2 11247999999754311 012345789999999999999988775 667778888
Q ss_pred CCccCCCCccccchHHHHHHHHhhc--CC-------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 146 GLHLQDEYPIAVGQERAVKLVREAA--PL-------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 146 G~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+.+.++.......-........... ++ ..+...+ |+++++..++... ..|+++++.+|...
T Consensus 195 ~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~-D~a~a~~~~l~~~---~~~~~yni~~~~~~ 264 (352)
T PRK10084 195 SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE-DHARALYKVVTEG---KAGETYNIGGHNEK 264 (352)
T ss_pred cceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH-HHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence 8888775321100111111111111 11 1234444 9999998887532 34788999887654
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-11 Score=99.93 Aligned_cols=184 Identities=11% Similarity=0.004 Sum_probs=115.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++..+++.+ .+|+|||+|+.... . ...+..+..+++|+.++.++++++.+...+
T Consensus 60 ~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~Vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~ 127 (340)
T PLN02653 60 ARMKLHYGDLSDA--SSLRRWLDDI-----KPDEVYNLAAQSHV-A----VSFEMPDYTADVVATGALRLLEAVRLHGQE 127 (340)
T ss_pred CceEEEEecCCCH--HHHHHHHHHc-----CCCEEEECCcccch-h----hhhhChhHHHHHHHHHHHHHHHHHHHhccc
Confidence 4588999999998 8888887764 48999999997522 1 223445777899999999999999887654
Q ss_pred cCCCCeEEEeeccccccc--------CCCCCcchhHHhHHHHHHHHHHHHHHhCC---CCeEEEEeecCCccCCCCcccc
Q 027744 89 SKAGGSIVFLTSIIGAER--------GLYPGAAAYGACAASIHQLVRTAAMEIGK---HKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~--------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~---~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+.-.++|++||...+-. .+..+...|+.+|.+.+.+++.++++++- .++.++.+.|+...+ +.....
T Consensus 128 ~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~~ 206 (340)
T PLN02653 128 TGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN-FVTRKI 206 (340)
T ss_pred cccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc-cchhHH
Confidence 211137888988654311 11124678999999999999999888642 123334444543221 111000
Q ss_pred chHHHHHHHHhh---------cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREA---------APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........... ...+.+...+ |++++++.++... .+..+++.+|...+
T Consensus 207 -~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~-D~a~a~~~~~~~~----~~~~yni~~g~~~s 263 (340)
T PLN02653 207 -TRAVGRIKVGLQKKLFLGNLDASRDWGFAG-DYVEAMWLMLQQE----KPDDYVVATEESHT 263 (340)
T ss_pred -HHHHHHHHcCCCCceEeCCCcceecceeHH-HHHHHHHHHHhcC----CCCcEEecCCCcee
Confidence 00010111011 1122345555 9999999988542 24679998887544
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-10 Score=97.67 Aligned_cols=129 Identities=13% Similarity=0.031 Sum_probs=98.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.+++++. ++|+|||+|+.. .......++++++..+++|+.++.++++++...-.
T Consensus 113 ~~v~~v~~Dl~d~--~~v~~~l~~~-----~~D~ViHlAa~~--~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv- 182 (442)
T PLN02572 113 KEIELYVGDICDF--EFLSEAFKSF-----EPDAVVHFGEQR--SAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP- 182 (442)
T ss_pred CcceEEECCCCCH--HHHHHHHHhC-----CCCEEEECCCcc--cChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 3688999999998 8888887753 589999999763 23334455667788899999999999999865411
Q ss_pred cCCCCeEEEeecccccccC----------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC
Q 027744 89 SKAGGSIVFLTSIIGAERG----------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~----------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG 146 (219)
.+++|++||...+-.. +..+...|+.+|.+.+.+++.+++. .|+.+.+++|+
T Consensus 183 ---~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~ 256 (442)
T PLN02572 183 ---DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQG 256 (442)
T ss_pred ---CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecc
Confidence 2479999998654110 1123467999999999999988776 48999999999
Q ss_pred CccCCCC
Q 027744 147 LHLQDEY 153 (219)
Q Consensus 147 ~v~t~~~ 153 (219)
.+.++..
T Consensus 257 ~vyGp~~ 263 (442)
T PLN02572 257 VVYGVRT 263 (442)
T ss_pred cccCCCC
Confidence 9998864
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-10 Score=93.50 Aligned_cols=173 Identities=15% Similarity=0.161 Sum_probs=115.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|+++. +++.++++ ++|++||+|+.. ... ..+.+.+++++|+.++.++++++...
T Consensus 56 ~~~~~~~~Dl~~~--~~~~~~~~-------~~d~vih~A~~~-~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~--- 117 (322)
T PLN02986 56 ERLKLFKADLLEE--SSFEQAIE-------GCDAVFHTASPV-FFT-----VKDPQTELIDPALKGTINVLNTCKET--- 117 (322)
T ss_pred CceEEEecCCCCc--chHHHHHh-------CCCEEEEeCCCc-CCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---
Confidence 4688999999998 77777765 489999999964 211 11223567899999999999887542
Q ss_pred cCCCCeEEEeecccccccCCC--------------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 89 SKAGGSIVFLTSIIGAERGLY--------------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~--------------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
.+ -++||++||..+...+.. .+...|+.+|.+.+.+++.+.++. |+++++++|+.+
T Consensus 118 ~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v 193 (322)
T PLN02986 118 PS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFI 193 (322)
T ss_pred CC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccce
Confidence 11 368999999865311100 013569999999999999887764 799999999999
Q ss_pred cCCCCcccc--chHHHHHHHHhhc----CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 149 LQDEYPIAV--GQERAVKLVREAA----PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 149 ~t~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
.++...... ............. ....+...+ |+|++++.++.... . ++.++++|+
T Consensus 194 ~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~-Dva~a~~~al~~~~--~-~~~yni~~~ 254 (322)
T PLN02986 194 CGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVR-DVALAHIKALETPS--A-NGRYIIDGP 254 (322)
T ss_pred eCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHH-HHHHHHHHHhcCcc--c-CCcEEEecC
Confidence 998654221 1122222221111 112355666 99999999886432 2 347888554
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.6e-10 Score=91.61 Aligned_cols=160 Identities=16% Similarity=0.186 Sum_probs=108.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|+++. +.+..+++ .+|++||+|+.. ... . .+.++..+++|+.++.++++++.+...
T Consensus 57 ~~~~v~~Dl~d~--~~~~~~~~-------~~d~ViH~A~~~-~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-- 119 (351)
T PLN02650 57 RLTLWKADLAVE--GSFDDAIR-------GCTGVFHVATPM-DFE---S--KDPENEVIKPTVNGMLSIMKACAKAKT-- 119 (351)
T ss_pred ceEEEEecCCCh--hhHHHHHh-------CCCEEEEeCCCC-CCC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC--
Confidence 578899999998 77766654 489999999864 211 1 122356789999999999999876421
Q ss_pred CCCCeEEEeecccccccC----C-C---------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 90 KAGGSIVFLTSIIGAERG----L-Y---------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~----~-~---------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
.++||++||....... + + .+...|+.+|.+.+.+++.++++ +|++++.++|+.+.
T Consensus 120 --~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~ 194 (351)
T PLN02650 120 --VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVV 194 (351)
T ss_pred --ceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceE
Confidence 2589999997543110 0 0 01237999999999999998876 48999999999999
Q ss_pred CCCCccccchHHHHHH--HHhh------cCCCCCCCCchhHHHHHHHhccC
Q 027744 150 QDEYPIAVGQERAVKL--VREA------APLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
+|.............. .... ...+.+...+ |++++++.++..
T Consensus 195 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~-Dva~a~~~~l~~ 244 (351)
T PLN02650 195 GPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLD-DLCNAHIFLFEH 244 (351)
T ss_pred CCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHH-HHHHHHHHHhcC
Confidence 9865432222111111 0010 1123456666 999999998864
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.8e-10 Score=90.00 Aligned_cols=182 Identities=10% Similarity=0.033 Sum_probs=109.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.++++.+ ++|++||+|+.... . ...+.-...+++|+.++.++++++.+.-.+
T Consensus 55 ~~~~~~~~Dl~d~--~~l~~~~~~~-----~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~ 122 (343)
T TIGR01472 55 ARMKLHYGDLTDS--SNLRRIIDEI-----KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI 122 (343)
T ss_pred cceeEEEeccCCH--HHHHHHHHhC-----CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4588999999998 8887777754 48999999997522 1 111223566788999999999998764211
Q ss_pred cCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCC---CeEEEEeecCCccCCCCccc
Q 027744 89 SKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKH---KIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~---gi~v~~i~pG~v~t~~~~~~ 156 (219)
+ ..++|++||...+-. .+..+...|+.+|.+.+.+++.+++++.-. ++.++...|+.-.. .....
T Consensus 123 ~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~ 199 (343)
T TIGR01472 123 K--SVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRK 199 (343)
T ss_pred c--CeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchH
Confidence 1 247999999754411 112356789999999999999998876321 11122233332110 00000
Q ss_pred cchHHHHHHHHh---------hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 VGQERAVKLVRE---------AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. .......... ......+...+ |++++++.++... .+..+++.+|...+
T Consensus 200 ~-~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~-D~a~a~~~~~~~~----~~~~yni~~g~~~s 257 (343)
T TIGR01472 200 I-TRAAAKIKLGLQEKLYLGNLDAKRDWGHAK-DYVEAMWLMLQQD----KPDDYVIATGETHS 257 (343)
T ss_pred H-HHHHHHHHcCCCCceeeCCCccccCceeHH-HHHHHHHHHHhcC----CCccEEecCCCcee
Confidence 0 0011111101 11123345555 9999998887542 13579998886544
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-09 Score=86.24 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=120.2
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
.++.+|++|. +++.++++ ++|++||.|+...... ....+.++++|+.|+-++++++... +
T Consensus 48 ~~~~~Di~d~--~~l~~a~~-------g~d~V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~----~- 107 (280)
T PF01073_consen 48 EYIQGDITDP--ESLEEALE-------GVDVVFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA----G- 107 (280)
T ss_pred eEEEeccccH--HHHHHHhc-------CCceEEEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence 3899999999 88888776 5799999999763221 3456788999999999999988753 2
Q ss_pred CCeEEEeeccccccc---C----------C--CCCcchhHHhHHHHHHHHHHHHH-HhC-CCCeEEEEeecCCccCCCCc
Q 027744 92 GGSIVFLTSIIGAER---G----------L--YPGAAAYGACAASIHQLVRTAAM-EIG-KHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 92 ~g~iv~iss~~~~~~---~----------~--~~~~~~y~~sK~a~~~l~~~l~~-e~~-~~gi~v~~i~pG~v~t~~~~ 154 (219)
-.++|++||..+... + + ......|+.||+..|.++..... ++. ...++..+|+|..|.+|...
T Consensus 108 VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~ 187 (280)
T PF01073_consen 108 VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ 187 (280)
T ss_pred CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc
Confidence 478999999987533 1 0 01345899999999999988665 111 12589999999999998665
Q ss_pred cccchHHHHHHHHhh---cCCC------CCCCCchhHHHHHHHhcc---CC--CCcccceEEEecCCcccc
Q 027744 155 IAVGQERAVKLVREA---APLH------RWLDVKNDLASTVIYLIS---DG--SRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~---~~~~------~~~~~~~dva~~~~~l~s---~~--~~~~~G~~i~~dgG~~~~ 211 (219)
...+.- ....... ...+ .+...+ ++|++.+-.+. +. ...+.||.+.+..|....
T Consensus 188 ~~~~~~--~~~~~~g~~~~~~g~~~~~~~~vyV~-NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~ 255 (280)
T PF01073_consen 188 RLVPRL--VKMVRSGLFLFQIGDGNNLFDFVYVE-NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVP 255 (280)
T ss_pred cccchh--hHHHHhcccceeecCCCceECcEeHH-HHHHHHHHHHHHhccccccccCCCcEEEEECCCccC
Confidence 433211 1111111 1111 123344 88887754332 22 456899999998877654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-09 Score=88.44 Aligned_cols=168 Identities=16% Similarity=0.157 Sum_probs=109.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHH--HHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF--KKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.+++++.+|+++. +++.++++ .+|+|||+|+...........+++.+ ...++.|+.++.++++++.+.
T Consensus 57 ~~~~~~~~~Dl~~~--~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~ 127 (353)
T PLN02896 57 GDRLRLFRADLQEE--GSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS 127 (353)
T ss_pred CCeEEEEECCCCCH--HHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc
Confidence 35688999999998 77766653 48999999997532211122333333 456778889999999988754
Q ss_pred HHhcCCCCeEEEeecccccccCC-----------------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEE
Q 027744 86 MKESKAGGSIVFLTSIIGAERGL-----------------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~-----------------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~ 142 (219)
. . .++||++||...+...+ .++...|+.+|.+.+.+++.++++. |+++.+
T Consensus 128 ~---~-~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ 200 (353)
T PLN02896 128 K---T-VKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVS 200 (353)
T ss_pred C---C-ccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEE
Confidence 2 1 36899999976652100 0122379999999999999887764 799999
Q ss_pred eecCCccCCCCccccchHH--HHHHHHhhcC-------------CCCCCCCchhHHHHHHHhccC
Q 027744 143 IARGLHLQDEYPIAVGQER--AVKLVREAAP-------------LHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 143 i~pG~v~t~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~dva~~~~~l~s~ 192 (219)
++|+.+.+|......+... .......... ...+...+ |++++++.++..
T Consensus 201 lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~-Dva~a~~~~l~~ 264 (353)
T PLN02896 201 VITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIE-DICDAHIFLMEQ 264 (353)
T ss_pred EcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHH-HHHHHHHHHHhC
Confidence 9999999886543222111 1000001000 01245565 999999998853
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-09 Score=87.21 Aligned_cols=178 Identities=9% Similarity=0.001 Sum_probs=116.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|+.|. +++..+++ .+|+|||.|+...... ..++....+++|+.++.++++++.. .
T Consensus 70 ~~~~~~~Di~d~--~~l~~~~~-------~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~----~ 131 (348)
T PRK15181 70 RFIFIQGDIRKF--TDCQKACK-------NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARD----A 131 (348)
T ss_pred ceEEEEccCCCH--HHHHHHhh-------CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHH----c
Confidence 578899999987 66665554 4899999999742211 1223345689999999999998753 2
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--- 157 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--- 157 (219)
+ -.++|++||...+-.. +..+...|+.+|.+.+.+++.++++. |+++..++|+.+.+|......
T Consensus 132 ~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~ 207 (348)
T PRK15181 132 H-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRRQNPNGAYS 207 (348)
T ss_pred C-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcCCCCCCccc
Confidence 2 3589999998654211 01245689999999999998876653 799999999999987543210
Q ss_pred -c-hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 -G-QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 -~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ........ ...++. .+... +|++++++.++........|+++++.+|...+
T Consensus 208 ~~i~~~~~~~~-~~~~i~~~g~g~~~rd~i~v-~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s 270 (348)
T PRK15181 208 AVIPRWILSLL-KDEPIYINGDGSTSRDFCYI-ENVIQANLLSATTNDLASKNKVYNVAVGDRTS 270 (348)
T ss_pred cCHHHHHHHHH-cCCCcEEeCCCCceEeeEEH-HHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence 0 11111111 111211 12333 49999988766432222467899998886543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-09 Score=88.34 Aligned_cols=160 Identities=16% Similarity=0.202 Sum_probs=108.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|++||+|+.. .. . ..+.+...+++|+.++.++++++.+..
T Consensus 60 ~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~A~~~-~~---~--~~~~~~~~~~~nv~g~~~ll~a~~~~~--- 121 (338)
T PLN00198 60 DLKIFGADLTDE--ESFEAPIA-------GCDLVFHVATPV-NF---A--SEDPENDMIKPAIQGVHNVLKACAKAK--- 121 (338)
T ss_pred ceEEEEcCCCCh--HHHHHHHh-------cCCEEEEeCCCC-cc---C--CCChHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 588999999998 77766654 589999999853 11 1 112345678999999999999986531
Q ss_pred CCCCeEEEeecccccccC----------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 90 KAGGSIVFLTSIIGAERG----------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~----------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
+ .++||++||.+.+... ..++...|+.+|.+.+.+++.++++ .|+++.+++|+.
T Consensus 122 ~-~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~ 197 (338)
T PLN00198 122 S-VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTL 197 (338)
T ss_pred C-ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCc
Confidence 1 4689999998755210 0123557999999999999998776 379999999999
Q ss_pred ccCCCCccccchH--HHHHHHHhh---------cC----CCCCCCCchhHHHHHHHhccC
Q 027744 148 HLQDEYPIAVGQE--RAVKLVREA---------AP----LHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 148 v~t~~~~~~~~~~--~~~~~~~~~---------~~----~~~~~~~~~dva~~~~~l~s~ 192 (219)
+.+|......+.. ......... .+ ...+...+ |++++++.++..
T Consensus 198 vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~-D~a~a~~~~~~~ 256 (338)
T PLN00198 198 MAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE-DVCRAHIFLAEK 256 (338)
T ss_pred eECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH-HHHHHHHHHhhC
Confidence 9988643211110 111111000 00 02345555 999999988864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-09 Score=87.14 Aligned_cols=168 Identities=15% Similarity=0.149 Sum_probs=112.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++..+++ ++|+|||+|+.. . ++++..+++|+.++.++++++...
T Consensus 60 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~Vih~A~~~-~---------~~~~~~~~~nv~gt~~ll~aa~~~--- 117 (342)
T PLN02214 60 ERLILCKADLQDY--EALKAAID-------GCDGVFHTASPV-T---------DDPEQMVEPAVNGAKFVINAAAEA--- 117 (342)
T ss_pred CcEEEEecCcCCh--HHHHHHHh-------cCCEEEEecCCC-C---------CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence 3588899999998 77776664 489999999863 1 135677999999999999988642
Q ss_pred cCCCCeEEEeeccccccc--CCC-----------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 89 SKAGGSIVFLTSIIGAER--GLY-----------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~--~~~-----------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
+ -++||++||..+... ... .+...|+.+|.+.+.+++.+.++. |+++.+++|+.+.
T Consensus 118 -~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vy 192 (342)
T PLN02214 118 -K-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVL 192 (342)
T ss_pred -C-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceE
Confidence 2 368999999653211 000 123579999999999999887764 7999999999999
Q ss_pred CCCCccccch--HHHHHHHHhhcC-----CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 150 QDEYPIAVGQ--ERAVKLVREAAP-----LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 150 t~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
++........ ...........+ ...+...+ |+|++++.++... . .|..+++.++
T Consensus 193 Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~-Dva~a~~~al~~~--~-~~g~yn~~~~ 253 (342)
T PLN02214 193 GPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVR-DVALAHVLVYEAP--S-ASGRYLLAES 253 (342)
T ss_pred CCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHH-HHHHHHHHHHhCc--c-cCCcEEEecC
Confidence 9864321111 111111111111 11344555 9999999888542 2 2345667543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.8e-09 Score=87.09 Aligned_cols=180 Identities=19% Similarity=0.194 Sum_probs=112.8
Q ss_pred cceEEEEecCCccchhH--HHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGA--FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~--~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+++++.+|++++ .. .......+ ...+|++||||+..... ..++...++|+.++..+++.+..
T Consensus 61 ~~v~~~~~D~~~~--~~gl~~~~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~-- 125 (367)
T TIGR01746 61 ERIEVVAGDLSEP--RLGLSDAEWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAAS-- 125 (367)
T ss_pred CCEEEEeCCcCcc--cCCcCHHHHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhh--
Confidence 4789999999875 21 01112222 24699999999975211 23566778999999988887653
Q ss_pred HhcCCCCeEEEeecccccccCC--------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 87 KESKAGGSIVFLTSIIGAERGL--------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~--------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
.+ ..+++++||........ ......|+.+|.+.+.+++.+.. .|+++++++||.+.++.
T Consensus 126 --~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~ 198 (367)
T TIGR01746 126 --GR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNS 198 (367)
T ss_pred --CC-CceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecC
Confidence 22 35699999987652110 01234799999999999887654 38999999999999863
Q ss_pred Cccc-cchHHHHHHHHh-----hcCC-----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 153 YPIA-VGQERAVKLVRE-----AAPL-----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 153 ~~~~-~~~~~~~~~~~~-----~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.... ............ ..|. ..+... +|++++++.++.......+|+++++.++..+.
T Consensus 199 ~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v-ddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s 267 (367)
T TIGR01746 199 YTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPV-DYVARAIVALSSQPAASAGGPVFHVVNPEPVS 267 (367)
T ss_pred CCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccH-HHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence 2211 111111111111 1121 113334 49999999988654433458899998875443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-09 Score=86.80 Aligned_cols=169 Identities=14% Similarity=0.080 Sum_probs=111.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++..++ ..+|+++|.++.. . . . ..+++.++++|+.+++++++++.+.+.
T Consensus 57 ~~~~~~~~Dl~d~--~~~~~~l-------~~~d~v~~~~~~~-~--~---~-~~~~~~~~~~nv~gt~~ll~aa~~~~~- 119 (297)
T PLN02583 57 ERLKVFDVDPLDY--HSILDAL-------KGCSGLFCCFDPP-S--D---Y-PSYDEKMVDVEVRAAHNVLEACAQTDT- 119 (297)
T ss_pred CceEEEEecCCCH--HHHHHHH-------cCCCEEEEeCccC-C--c---c-cccHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 4688999999998 7765554 3589999876542 1 1 1 124678999999999999999977541
Q ss_pred cCCCCeEEEeecccccccC-CCC---------Cc----------chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 89 SKAGGSIVFLTSIIGAERG-LYP---------GA----------AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~-~~~---------~~----------~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
.++||++||..+...+ ... .+ ..|+.+|...+.+++.++++ .|+++++++|+.|
T Consensus 120 ---v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v 193 (297)
T PLN02583 120 ---IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLL 193 (297)
T ss_pred ---ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcc
Confidence 3689999998764211 000 01 15999999999999888765 3899999999999
Q ss_pred cCCCCccccchHHHHHHHHhhcC--CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 149 LQDEYPIAVGQERAVKLVREAAP--LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 149 ~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
.++....... ...... ...+ ...+...+ |+|++.+..+... ...| .+.+-++
T Consensus 194 ~Gp~~~~~~~--~~~~~~-~~~~~~~~~~v~V~-Dva~a~~~al~~~--~~~~-r~~~~~~ 247 (297)
T PLN02583 194 MGPSLTQHNP--YLKGAA-QMYENGVLVTVDVN-FLVDAHIRAFEDV--SSYG-RYLCFNH 247 (297)
T ss_pred cCCCCCCchh--hhcCCc-ccCcccCcceEEHH-HHHHHHHHHhcCc--ccCC-cEEEecC
Confidence 9886532111 000000 0001 11245566 9999999988632 2234 4555555
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.6e-09 Score=80.66 Aligned_cols=173 Identities=17% Similarity=0.229 Sum_probs=119.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|+.|. ++++++++.. .+|.+||+|+... .....+.....+..|+.++..+++.+...
T Consensus 43 ~~~~~~~dl~~~--~~~~~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~---- 106 (236)
T PF01370_consen 43 NVEFVIGDLTDK--EQLEKLLEKA-----NIDVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA---- 106 (236)
T ss_dssp TEEEEESETTSH--HHHHHHHHHH-----TESEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred eEEEEEeecccc--cccccccccc-----CceEEEEeecccc-----ccccccccccccccccccccccccccccc----
Confidence 688999999998 8888888875 6999999999741 11223566777888888877777777543
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC---Ccccc
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE---YPIAV 157 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~---~~~~~ 157 (219)
+ ..+++++||...+... +..+...|+.+|...+.+++.+.+.. ++++..++|+.+.++. .....
T Consensus 107 ~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~ 182 (236)
T PF01370_consen 107 G-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSS 182 (236)
T ss_dssp T-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSS
T ss_pred c-ccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 2 3689999997655221 01245679999999999999988875 7999999999999888 11111
Q ss_pred chHHHHHHHHhhcCCCC---------CCCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 158 GQERAVKLVREAAPLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
.-...........+... +... +|++++++.++.... ..|++++|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~--~~~~~yNig 236 (236)
T PF01370_consen 183 FLPSLIRQALKGKPIKIPGDGSQVRDFIHV-DDLAEAIVAALENPK--AAGGIYNIG 236 (236)
T ss_dssp HHHHHHHHHHTTSSEEEESTSSCEEEEEEH-HHHHHHHHHHHHHSC--TTTEEEEES
T ss_pred ccchhhHHhhcCCcccccCCCCCccceEEH-HHHHHHHHHHHhCCC--CCCCEEEeC
Confidence 11222222212222111 1222 599999999997644 578888873
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.7e-09 Score=83.91 Aligned_cols=183 Identities=9% Similarity=0.069 Sum_probs=113.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++..+++. .++|++||+|+... ... ..+.....+++|+.++..+++++. +
T Consensus 50 ~~~~~~~~Dl~d~--~~~~~~~~~-----~~~d~vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~ 113 (338)
T PRK10675 50 KHPTFVEGDIRNE--ALLTEILHD-----HAIDTVIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAMR----A 113 (338)
T ss_pred CCceEEEccCCCH--HHHHHHHhc-----CCCCEEEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHHH----H
Confidence 3567889999998 777777653 36999999998752 211 123345678899999999887654 3
Q ss_pred cCCCCeEEEeecccccccC---------C-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc----
Q 027744 89 SKAGGSIVFLTSIIGAERG---------L-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP---- 154 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~---------~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~---- 154 (219)
.+ .+++|++||...+... + ..+...|+.+|.+.+.+++.++++.. ++++..++++.+.++...
T Consensus 114 ~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~~~~~~~g 190 (338)
T PRK10675 114 AN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHPSGDMG 190 (338)
T ss_pred cC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCCCcccccc
Confidence 33 4689999997644110 0 12467899999999999999876542 477778887665554211
Q ss_pred cc---cchH---HHHHHHHhhcC----------------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 155 IA---VGQE---RAVKLVREAAP----------------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 155 ~~---~~~~---~~~~~~~~~~~----------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. .... ..........+ ...+...+ |+|++++.++........|+++++.+|..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~-D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s 268 (338)
T PRK10675 191 EDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM-DLADGHVAAMEKLANKPGVHIYNLGAGVGSS 268 (338)
T ss_pred cCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH-HHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence 00 0001 11111111110 01234444 9999988877532122346899998887654
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.09 E-value=6e-09 Score=83.87 Aligned_cols=182 Identities=13% Similarity=0.076 Sum_probs=117.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|+++. +++.++++. +++|++||+||.... .. ...+....+..|+.++..+++++.. .
T Consensus 48 ~~~~~~~D~~~~--~~~~~~~~~-----~~~d~vv~~ag~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~ 111 (328)
T TIGR01179 48 RVTFVEGDLRDR--ELLDRLFEE-----HKIDAVIHFAGLIAV-GE----SVQDPLKYYRNNVVNTLNLLEAMQQ----T 111 (328)
T ss_pred ceEEEECCCCCH--HHHHHHHHh-----CCCcEEEECccccCc-ch----hhcCchhhhhhhHHHHHHHHHHHHh----c
Confidence 567889999998 888777663 479999999997522 11 2234456788899999998887543 2
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--- 157 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--- 157 (219)
+ .+++|++||...+... +..+...|+.+|++.+.+++.++++. .++++.+++|+.+.++......
T Consensus 112 ~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~ 188 (328)
T TIGR01179 112 G-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGED 188 (328)
T ss_pred C-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccC
Confidence 2 4689999987553111 01245689999999999999987652 4689999999888876422110
Q ss_pred ---chHHH---HHHHHhh-c---------CC------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 ---GQERA---VKLVREA-A---------PL------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ---~~~~~---~~~~~~~-~---------~~------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..... ....... . +. ..+.... |+++++..++........|+++++.+|..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~-D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s 263 (328)
T TIGR01179 189 PPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVM-DLADAHLAALEYLLNGGESHVYNLGYGQGFS 263 (328)
T ss_pred CcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHH-HHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence 01011 1111100 0 10 1223445 9999999888542222357889998776544
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-09 Score=84.68 Aligned_cols=183 Identities=13% Similarity=0.119 Sum_probs=115.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++..++++. .+|++||+|+... .. .+.+++...+++|+.++..+++++..
T Consensus 58 ~~~~~~~~D~~~~--~~l~~~~~~~-----~~d~vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~---- 121 (352)
T PLN02240 58 DNLVFHKVDLRDK--EALEKVFAST-----RFDAVIHFAGLKA-VG----ESVAKPLLYYDNNLVGTINLLEVMAK---- 121 (352)
T ss_pred ccceEEecCcCCH--HHHHHHHHhC-----CCCEEEEccccCC-cc----ccccCHHHHHHHHHHHHHHHHHHHHH----
Confidence 4678999999998 8887776642 6999999999742 11 13346778899999999999886532
Q ss_pred cCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc----c
Q 027744 89 SKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP----I 155 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~----~ 155 (219)
.+ .+++|++||...+.. .+..+...|+.+|.+.+.+++.++.+. .++++..++++.+..+... .
T Consensus 122 ~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~ 198 (352)
T PLN02240 122 HG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGE 198 (352)
T ss_pred cC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccC
Confidence 22 368999999754311 112346789999999999999887652 3577788887655543210 0
Q ss_pred ---ccch---HHHHHHHHhhcC-C---------------CCCCCCchhHHHHHHHhccCC--CCcccceEEEecCCcccc
Q 027744 156 ---AVGQ---ERAVKLVREAAP-L---------------HRWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 156 ---~~~~---~~~~~~~~~~~~-~---------------~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG~~~~ 211 (219)
.... ...........+ . +.+.... |++++++.++... .....|+++++.+|..++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~-D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s 277 (352)
T PLN02240 199 DPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVM-DLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS 277 (352)
T ss_pred CCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHH-HHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence 0001 111111111111 1 1123344 9999888766421 122456899998887654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.3e-09 Score=83.45 Aligned_cols=172 Identities=19% Similarity=0.234 Sum_probs=111.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|+++. +++..+++ ++|++||+|+.... .. . +..+..+++|+.++.++++++....
T Consensus 55 ~~~~~~~~Dl~~~--~~~~~~~~-------~~d~Vih~A~~~~~--~~--~--~~~~~~~~~nv~gt~~ll~a~~~~~-- 117 (322)
T PLN02662 55 ERLHLFKANLLEE--GSFDSVVD-------GCEGVFHTASPFYH--DV--T--DPQAELIDPAVKGTLNVLRSCAKVP-- 117 (322)
T ss_pred CceEEEeccccCc--chHHHHHc-------CCCEEEEeCCcccC--CC--C--ChHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 4678999999998 77766654 48999999986421 10 1 1225778999999999999976431
Q ss_pred cCCCCeEEEeecccc--cccCCC-------------C-----CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 89 SKAGGSIVFLTSIIG--AERGLY-------------P-----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv~iss~~~--~~~~~~-------------~-----~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
+ -++||++||..+ +...+. + ....|+.+|.+.+.+++.+.++ .|+++..++|+.+
T Consensus 118 -~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v 192 (322)
T PLN02662 118 -S-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMV 192 (322)
T ss_pred -C-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcc
Confidence 1 368999999753 211000 0 0147999999999999887765 3799999999999
Q ss_pred cCCCCccccc--hHHHHHHHHhhc--C--CCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 149 LQDEYPIAVG--QERAVKLVREAA--P--LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 149 ~t~~~~~~~~--~~~~~~~~~~~~--~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.++....... ............ + ...+...+ |+|++++.++.... ..| .+++.|
T Consensus 193 ~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~~--~~~-~~~~~g 252 (322)
T PLN02662 193 IGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVR-DVANAHIQAFEIPS--ASG-RYCLVE 252 (322)
T ss_pred cCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHH-HHHHHHHHHhcCcC--cCC-cEEEeC
Confidence 9986532111 111111111110 1 12345555 99999999886432 235 455543
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=78.53 Aligned_cols=92 Identities=11% Similarity=0.130 Sum_probs=73.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+..++.+|+++. ++++++++++.+.+|++|++|||||+.....++.+.+.++ ++ .+|+.+.+..++.+.++|+
T Consensus 64 ~~~~~~~~~Dl~~~--~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~ 138 (169)
T PRK06720 64 GGEALFVSYDMEKQ--GDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFM 138 (169)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHH
Confidence 45677899999999 9999999999999999999999999864445555555555 44 6677788999999999988
Q ss_pred hcC------CCCeEEEeeccccc
Q 027744 88 ESK------AGGSIVFLTSIIGA 104 (219)
Q Consensus 88 ~~~------~~g~iv~iss~~~~ 104 (219)
+++ +.||+..||+.+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 139 KQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred hcCCEEEeecCceeeEecccccc
Confidence 753 25889999887664
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.6e-08 Score=71.52 Aligned_cols=172 Identities=14% Similarity=0.103 Sum_probs=120.3
Q ss_pred ecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCCCCCCCCcC-HHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 16 LDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVG-EDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 16 ~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
+|..+.+-|+.+.+++++.+.++ ++|.+++.||.+. .+....-+ ...-+.|++-.++....-.+.+-.+++. +
T Consensus 47 V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWA-GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---G 122 (236)
T KOG4022|consen 47 VDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWA-GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---G 122 (236)
T ss_pred ecCCcchhHHHHHHHHHHHHhhcccccceEEEeecccc-CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---C
Confidence 34444444778888888877764 6999999999773 33222111 2334555666666666666666666653 4
Q ss_pred CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 93 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
|.+-..+.-++. .+ .|++..|+++|+|++.++++++.+-. +.|--+..|-|=..+|||.+.++++.+..
T Consensus 123 GLL~LtGAkaAl-~g-TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs------- 193 (236)
T KOG4022|consen 123 GLLQLTGAKAAL-GG-TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS------- 193 (236)
T ss_pred ceeeeccccccc-CC-CCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc-------
Confidence 544444444443 33 79999999999999999999998754 45778889999999999999988765432
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.+ +|-+.+++.......+.++.-+|..+.+
T Consensus 194 ---sW-TPL~fi~e~flkWtt~~~RPssGsLlqi 223 (236)
T KOG4022|consen 194 ---SW-TPLSFISEHFLKWTTETSRPSSGSLLQI 223 (236)
T ss_pred ---Cc-ccHHHHHHHHHHHhccCCCCCCCceEEE
Confidence 11 2334899999988888888888977666
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-08 Score=88.99 Aligned_cols=179 Identities=13% Similarity=0.062 Sum_probs=115.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +.+..++.. .++|+|||+|+...... ...+....+++|+.++..+++++...
T Consensus 57 ~~v~~~~~Dl~d~--~~~~~~~~~-----~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--- 121 (668)
T PLN02260 57 PNFKFVKGDIASA--DLVNYLLIT-----EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT--- 121 (668)
T ss_pred CCeEEEECCCCCh--HHHHHHHhh-----cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHhc---
Confidence 4688999999998 666554422 36999999999752211 12233466789999999998887532
Q ss_pred cCCCCeEEEeecccccccC------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 89 SKAGGSIVFLTSIIGAERG------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
+.-+++|++||...+... +..+...|+.+|.+.+.+++.+.++. ++.+.+++|+.+.++.....
T Consensus 122 -~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~~ 197 (668)
T PLN02260 122 -GQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFPE 197 (668)
T ss_pred -CCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCcc
Confidence 113689999997644110 11245679999999999999887764 78899999999998754321
Q ss_pred cchHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 157 VGQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..............++ ..+... +|+++++..++... ..|+++++.++..+
T Consensus 198 ~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV-~Dva~a~~~~l~~~---~~~~vyni~~~~~~ 256 (668)
T PLN02260 198 KLIPKFILLAMQGKPLPIHGDGSNVRSYLYC-EDVAEAFEVVLHKG---EVGHVYNIGTKKER 256 (668)
T ss_pred cHHHHHHHHHhCCCCeEEecCCCceEeeEEH-HHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence 1111111111111111 112334 49999998887432 34788999887654
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-08 Score=79.57 Aligned_cols=175 Identities=14% Similarity=0.150 Sum_probs=108.5
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
.+..|+++. +..+.+.+. .+.++|++||+|+.. . ...++.+..+++|+.++..+++++... +
T Consensus 45 ~~~~d~~~~--~~~~~~~~~---~~~~~D~vvh~A~~~-~------~~~~~~~~~~~~n~~~~~~ll~~~~~~------~ 106 (314)
T TIGR02197 45 VIADYIDKE--DFLDRLEKG---AFGKIEAIFHQGACS-D------TTETDGEYMMENNYQYSKRLLDWCAEK------G 106 (314)
T ss_pred eeeccCcch--hHHHHHHhh---ccCCCCEEEECcccc-C------ccccchHHHHHHHHHHHHHHHHHHHHh------C
Confidence 455677665 444444332 346799999999964 2 122345678899999999999887542 3
Q ss_pred CeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--ch--
Q 027744 93 GSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--GQ-- 159 (219)
Q Consensus 93 g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~-- 159 (219)
.++|++||...+... +..+...|+.+|.+.+.+++...... ..++++..++|+.+.++...... ..
T Consensus 107 ~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~ 185 (314)
T TIGR02197 107 IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVA 185 (314)
T ss_pred CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHH
Confidence 479999997654210 01256789999999999998644332 12478899999988887532110 00
Q ss_pred -HHHHHHHHhh-cCC-------------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 -ERAVKLVREA-APL-------------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 -~~~~~~~~~~-~~~-------------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.......... ..+ +.+... +|+++++..++.. ..+.++++.+|..++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v-~D~a~~i~~~~~~----~~~~~yni~~~~~~s 247 (314)
T TIGR02197 186 FHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV-KDVVDVNLWLLEN----GVSGIFNLGTGRARS 247 (314)
T ss_pred HHHHHHHhcCCCeEEecCccccCCCCceeeeEEH-HHHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence 1111111010 110 123334 4999999998854 246789998886654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.6e-08 Score=79.48 Aligned_cols=169 Identities=15% Similarity=0.098 Sum_probs=111.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|++|. +++.++++ .+|++||+|+.... ..++++..+++|+.++..+++++...
T Consensus 44 ~~~~~~~D~~~~--~~l~~~~~-------~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---- 103 (328)
T TIGR03466 44 DVEIVEGDLRDP--ASLRKAVA-------GCRALFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEA---- 103 (328)
T ss_pred CceEEEeeCCCH--HHHHHHHh-------CCCEEEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHh----
Confidence 578899999998 77766654 57999999985311 11235677889999999998887542
Q ss_pred CCCCeEEEeecccccccCCC-------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 90 KAGGSIVFLTSIIGAERGLY-------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~-------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
+ .+++|++||...+..... .....|+.+|.+.+.+++.++.+ .++++..++|+.+.++.....
T Consensus 104 ~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~ 179 (328)
T TIGR03466 104 G-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKP 179 (328)
T ss_pred C-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCC
Confidence 2 468999999766521100 01357999999999999988765 378999999999887654322
Q ss_pred cch-HHHHHHHHhhcCC-----CCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 157 VGQ-ERAVKLVREAAPL-----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 157 ~~~-~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
... ...........+. ..+...+ |+|+++..++.. ...|+.++++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-D~a~a~~~~~~~---~~~~~~~~~~~ 231 (328)
T TIGR03466 180 TPTGRIIVDFLNGKMPAYVDTGLNLVHVD-DVAEGHLLALER---GRIGERYILGG 231 (328)
T ss_pred CcHHHHHHHHHcCCCceeeCCCcceEEHH-HHHHHHHHHHhC---CCCCceEEecC
Confidence 111 1111111111111 1233444 999998888754 23678888854
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.5e-08 Score=79.81 Aligned_cols=174 Identities=9% Similarity=0.076 Sum_probs=109.9
Q ss_pred cceEEEEecCC-ccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDME-EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++.+|+. +. +.+..++ .++|+|||+|+...+.. ..++.+..+++|+.++.++++++..
T Consensus 46 ~~~~~~~~Dl~~~~--~~~~~~~-------~~~d~ViH~aa~~~~~~-----~~~~p~~~~~~n~~~~~~ll~aa~~--- 108 (347)
T PRK11908 46 PRMHFFEGDITINK--EWIEYHV-------KKCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVK--- 108 (347)
T ss_pred CCeEEEeCCCCCCH--HHHHHHH-------cCCCEEEECcccCChHH-----hhcCcHHHHHHHHHHHHHHHHHHHh---
Confidence 46888999998 44 3333332 25899999999742211 1223356678999999988887753
Q ss_pred hcCCCCeEEEeecccccccCC----------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAERGL----------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~----------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
. +.++|++||...+.... ..+...|+.+|.+.+.+++.+++. .|+.+..++|+.+.++
T Consensus 109 -~--~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp 182 (347)
T PRK11908 109 -Y--GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGP 182 (347)
T ss_pred -c--CCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCC
Confidence 2 35899999975441100 012237999999999999988765 3788899999888776
Q ss_pred CCccc-----cch----HHHHHHHHhhc---------CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 152 EYPIA-----VGQ----ERAVKLVREAA---------PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 152 ~~~~~-----~~~----~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
..... ... ....... ... ..+.+...+ |++++++.++........|+++++.++
T Consensus 183 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~g~~~r~~i~v~-D~a~a~~~~~~~~~~~~~g~~yni~~~ 254 (347)
T PRK11908 183 GLDSIYTPKEGSSRVVTQFLGHIV-RGEPISLVDGGSQKRAFTDID-DGIDALMKIIENKDGVASGKIYNIGNP 254 (347)
T ss_pred CccCCCccccCCcchHHHHHHHHh-CCCceEEecCCceeeccccHH-HHHHHHHHHHhCccccCCCCeEEeCCC
Confidence 53211 001 1111111 111 122345555 999999998865322245889999875
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-08 Score=77.56 Aligned_cols=141 Identities=10% Similarity=0.165 Sum_probs=111.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--------------CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhc
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--------------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 73 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 73 (219)
...+.....|..+. .++...+.+..+.+. .+..+|..-....+.++++.++.+.|.+.++.|+.
T Consensus 49 ~~dI~~L~ld~~~~--~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll 126 (299)
T PF08643_consen 49 RPDIRPLWLDDSDP--SSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLL 126 (299)
T ss_pred CCCCCCcccCCCCC--cchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 44567777788777 788888888777664 34566665554447789999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 74 APWFLLKAVGRRMKESK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 74 ~~~~l~~~~~~~l~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
.++..++.++|+++.+. .+.+||.++......-+ .+..+.-.....++.++++.|++|+++++|.|..++.|.++-.
T Consensus 127 ~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~-~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 127 TPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN-PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG 204 (299)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC-CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence 99999999999998822 24677776644433123 5888899999999999999999999999999999998877644
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.8e-09 Score=85.20 Aligned_cols=174 Identities=10% Similarity=0.119 Sum_probs=109.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|+.|. +.+.++++ .+|+|||+|+...+ .... .. -...+..|+.++..+++++..
T Consensus 65 ~~~~~~~~Dl~d~--~~l~~~~~-------~~d~ViHlAa~~~~-~~~~-~~---~~~~~~~n~~gt~~ll~aa~~---- 126 (386)
T PLN02427 65 GRIQFHRINIKHD--SRLEGLIK-------MADLTINLAAICTP-ADYN-TR---PLDTIYSNFIDALPVVKYCSE---- 126 (386)
T ss_pred CCeEEEEcCCCCh--HHHHHHhh-------cCCEEEEcccccCh-hhhh-hC---hHHHHHHHHHHHHHHHHHHHh----
Confidence 3688999999998 77666654 37999999997422 1111 11 123356799999888887642
Q ss_pred cCCCCeEEEeecccccccC---------CC----------------------CCcchhHHhHHHHHHHHHHHHHHhCCCC
Q 027744 89 SKAGGSIVFLTSIIGAERG---------LY----------------------PGAAAYGACAASIHQLVRTAAMEIGKHK 137 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~---------~~----------------------~~~~~y~~sK~a~~~l~~~l~~e~~~~g 137 (219)
. +.++|++||...+-.. +. .+...|+.+|.+.+.+++.+++. .|
T Consensus 127 ~--~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g 201 (386)
T PLN02427 127 N--NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG 201 (386)
T ss_pred c--CCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC
Confidence 2 3589999997543110 00 01236999999999999877654 47
Q ss_pred eEEEEeecCCccCCCCccc--------cchHHHH---HHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcc
Q 027744 138 IRVNGIARGLHLQDEYPIA--------VGQERAV---KLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYM 197 (219)
Q Consensus 138 i~v~~i~pG~v~t~~~~~~--------~~~~~~~---~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~ 197 (219)
+.+.+++|+.+.++..... ....... .......+. ..+...+ |++++++.++... ...
T Consensus 202 ~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~-Dva~ai~~al~~~-~~~ 279 (386)
T PLN02427 202 LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIK-DAIEAVLLMIENP-ARA 279 (386)
T ss_pred CceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHH-HHHHHHHHHHhCc-ccc
Confidence 9999999999998753210 0001111 111111121 1244455 9999999888532 124
Q ss_pred cceEEEecCC
Q 027744 198 TGTTIYVDGA 207 (219)
Q Consensus 198 ~G~~i~~dgG 207 (219)
.|+++++.+|
T Consensus 280 ~g~~yni~~~ 289 (386)
T PLN02427 280 NGHIFNVGNP 289 (386)
T ss_pred cCceEEeCCC
Confidence 5789999876
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-07 Score=74.61 Aligned_cols=177 Identities=18% Similarity=0.196 Sum_probs=121.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+...+..|+.|+ ++...+++ ++|+|+|.|.... ... .+ .-.+++...+.|+.++++++...-
T Consensus 56 ~~~l~l~~aDL~d~--~sf~~ai~-------gcdgVfH~Asp~~-~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~- 119 (327)
T KOG1502|consen 56 KERLKLFKADLLDE--GSFDKAID-------GCDGVFHTASPVD-FDL---ED--PEKELIDPAVKGTKNVLEACKKTK- 119 (327)
T ss_pred cccceEEecccccc--chHHHHHh-------CCCEEEEeCccCC-CCC---CC--cHHhhhhHHHHHHHHHHHHHhccC-
Confidence 34699999999999 88888876 4899999999752 221 11 122678889999999999986542
Q ss_pred hcCCCCeEEEeecccccccC-CC-C--------Cc----------chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 88 ESKAGGSIVFLTSIIGAERG-LY-P--------GA----------AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-~~-~--------~~----------~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
.=.|||+.||.++.... +. . .| ..|+.+|...+--+..++.+- |+.+.+|+|++
T Consensus 120 ---sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~l 193 (327)
T KOG1502|consen 120 ---SVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGL 193 (327)
T ss_pred ---CcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCc
Confidence 12689999999986321 00 0 01 248888888888777777763 79999999999
Q ss_pred ccCCCCccccc--hHHHHHHHHhhcCC-----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 148 HLQDEYPIAVG--QERAVKLVREAAPL-----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 148 v~t~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
|.+|....... .....+........ ..+.+.. |||.+-+.++... ...|+.+.++...+
T Consensus 194 V~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVr-DVA~AHv~a~E~~--~a~GRyic~~~~~~ 259 (327)
T KOG1502|consen 194 VFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVR-DVALAHVLALEKP--SAKGRYICVGEVVS 259 (327)
T ss_pred eECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHH-HHHHHHHHHHcCc--ccCceEEEecCccc
Confidence 99998776322 22222333221111 1135555 9999999999543 44588888877665
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.8e-08 Score=78.27 Aligned_cols=175 Identities=13% Similarity=0.118 Sum_probs=108.7
Q ss_pred EEecCCccchhHHHHHHHHHHH--HhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQ--ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~--~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
..+|+.|. .+.+.+++.+.+ .++++|+|||+|+.... . ..+. +..++.|+.++.++++++.. .
T Consensus 43 ~~~~~~d~--~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~----~-- 107 (308)
T PRK11150 43 VDLDIADY--MDKEDFLAQIMAGDDFGDIEAIFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLE----R-- 107 (308)
T ss_pred hhhhhhhh--hhHHHHHHHHhcccccCCccEEEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHH----c--
Confidence 44666665 555555555432 23579999999986422 1 1122 34689999999999888753 2
Q ss_pred CCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc--cchH
Q 027744 92 GGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--VGQE 160 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~--~~~~ 160 (219)
+.++|++||...+... +..+...|+.+|.+.+.+++.+..+ .++++..++|+.+.++..... ....
T Consensus 108 ~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~ 184 (308)
T PRK11150 108 EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASV 184 (308)
T ss_pred CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchh
Confidence 2469999998654211 0124568999999999999887655 378999999999888754321 1100
Q ss_pred --HH-HHHHHhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 161 --RA-VKLVREAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 161 --~~-~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. ........+ .+.+...+ |++++++.++... .+.++++.+|..+.
T Consensus 185 ~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~-D~a~a~~~~~~~~----~~~~yni~~~~~~s 242 (308)
T PRK11150 185 AFHLNNQLNNGENPKLFEGSENFKRDFVYVG-DVAAVNLWFWENG----VSGIFNCGTGRAES 242 (308)
T ss_pred HHHHHHHHhcCCCCEEecCCCceeeeeeeHH-HHHHHHHHHHhcC----CCCeEEcCCCCcee
Confidence 11 111111111 11223444 9999988887532 24689998887543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.2e-08 Score=77.85 Aligned_cols=175 Identities=14% Similarity=0.100 Sum_probs=109.7
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
..+|+++. ++++.+++.. ++|+|||+|+....... ..++....+++|+.++..+++++... + -+
T Consensus 31 ~~~Dl~~~--~~l~~~~~~~-----~~d~Vih~A~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~ 94 (306)
T PLN02725 31 KELDLTRQ--ADVEAFFAKE-----KPTYVILAAAKVGGIHA----NMTYPADFIRENLQIQTNVIDAAYRH----G-VK 94 (306)
T ss_pred ccCCCCCH--HHHHHHHhcc-----CCCEEEEeeeeecccch----hhhCcHHHHHHHhHHHHHHHHHHHHc----C-CC
Confidence 36789888 7777766542 58999999997421100 11223456788999999888888642 2 36
Q ss_pred eEEEeecccccccC-------------CCCC-cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc---
Q 027744 94 SIVFLTSIIGAERG-------------LYPG-AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--- 156 (219)
Q Consensus 94 ~iv~iss~~~~~~~-------------~~~~-~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~--- 156 (219)
++|++||...+... +..+ ...|+.+|.+.+.+++.+.++. ++++..++|+.+.++.....
T Consensus 95 ~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~ 171 (306)
T PLN02725 95 KLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPEN 171 (306)
T ss_pred eEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCC
Confidence 89999997543110 1112 2359999999999998887664 78999999999988753210
Q ss_pred --cchHHHHHHH---Hhhc----------CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 --VGQERAVKLV---REAA----------PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 --~~~~~~~~~~---~~~~----------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.-........ .... +...+...+ |++++++.++... ..+..+++.+|..+.
T Consensus 172 ~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dv~~~~~~~~~~~---~~~~~~ni~~~~~~s 237 (306)
T PLN02725 172 SHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD-DLADAVVFLMRRY---SGAEHVNVGSGDEVT 237 (306)
T ss_pred CcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH-HHHHHHHHHHhcc---ccCcceEeCCCCccc
Confidence 0011111110 0111 122345555 9999999988642 134557888876654
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.9e-09 Score=83.35 Aligned_cols=171 Identities=15% Similarity=0.168 Sum_probs=107.6
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
.++.+|+.|. +.+++++++. ++|+++|.|+.-+ -++.+ +...+.+++|+.|+.++++++..+-
T Consensus 57 ~~vigDvrd~--~~l~~~~~~~-----~pdiVfHaAA~Kh--Vpl~E---~~p~eav~tNv~GT~nv~~aa~~~~----- 119 (293)
T PF02719_consen 57 VPVIGDVRDK--ERLNRIFEEY-----KPDIVFHAAALKH--VPLME---DNPFEAVKTNVLGTQNVAEAAIEHG----- 119 (293)
T ss_dssp E--CTSCCHH--HHHHHHTT-------T-SEEEE--------HHHHC---CCHHHHHHHHCHHHHHHHHHHHHTT-----
T ss_pred CceeecccCH--HHHHHHHhhc-----CCCEEEEChhcCC--CChHH---hCHHHHHHHHHHHHHHHHHHHHHcC-----
Confidence 4568899998 7777777643 6999999999742 22222 2356779999999999999998642
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcC
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP 171 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~ 171 (219)
-.++|++|+--+. .+...|+++|...+.++..++......+.++.+++-|-|.....+- -+.+.+...+..|
T Consensus 120 v~~~v~ISTDKAv-----~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSV---ip~F~~Qi~~g~P 191 (293)
T PF02719_consen 120 VERFVFISTDKAV-----NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSV---IPLFKKQIKNGGP 191 (293)
T ss_dssp -SEEEEEEECGCS-----S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSC---HHHHHHHHHTTSS
T ss_pred CCEEEEccccccC-----CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcH---HHHHHHHHHcCCc
Confidence 3689999997653 5678999999999999999999887778999999999887544332 2333333334433
Q ss_pred C-------CC-CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 172 L-------HR-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 172 ~-------~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+ .| +.+. +|.++.+...+.- ...|+++..|=|..+.
T Consensus 192 lTvT~p~mtRffmti-~EAv~Lvl~a~~~---~~~geifvl~mg~~v~ 235 (293)
T PF02719_consen 192 LTVTDPDMTRFFMTI-EEAVQLVLQAAAL---AKGGEIFVLDMGEPVK 235 (293)
T ss_dssp EEECETT-EEEEE-H-HHHHHHHHHHHHH-----TTEEEEE---TCEE
T ss_pred ceeCCCCcEEEEecH-HHHHHHHHHHHhh---CCCCcEEEecCCCCcC
Confidence 2 23 2344 4888887776643 2358999998877653
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.3e-08 Score=81.21 Aligned_cols=175 Identities=14% Similarity=0.128 Sum_probs=127.2
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+..+..++.+|+.|. +.+..+++.. ++|+++|.|+.-+ -|.- .....+.+++|+.|+.++++++...-
T Consensus 300 ~~~~~~~~igdVrD~--~~~~~~~~~~-----kvd~VfHAAA~KH--VPl~---E~nP~Eai~tNV~GT~nv~~aa~~~~ 367 (588)
T COG1086 300 PELKLRFYIGDVRDR--DRVERAMEGH-----KVDIVFHAAALKH--VPLV---EYNPEEAIKTNVLGTENVAEAAIKNG 367 (588)
T ss_pred CCcceEEEecccccH--HHHHHHHhcC-----CCceEEEhhhhcc--Ccch---hcCHHHHHHHhhHhHHHHHHHHHHhC
Confidence 357889999999999 8888887743 5999999999742 2322 33456789999999999999997643
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
-.++|.+|+--+ ..+...|+++|...+.+++++++.....+-++.+++-|-|.....+- -+.+.+..
T Consensus 368 -----V~~~V~iSTDKA-----V~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV---iPlFk~QI 434 (588)
T COG1086 368 -----VKKFVLISTDKA-----VNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV---IPLFKKQI 434 (588)
T ss_pred -----CCEEEEEecCcc-----cCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC---HHHHHHHH
Confidence 357999999655 35678999999999999999998776657899999999988655443 23333333
Q ss_pred HhhcCC-------CC-CCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPL-------HR-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~-------~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..|+ .| +.+- .|.++.++.... -.-.|+++.+|=|-+.
T Consensus 435 ~~GgplTvTdp~mtRyfMTI-~EAv~LVlqA~a---~~~gGeifvldMGepv 482 (588)
T COG1086 435 AEGGPLTVTDPDMTRFFMTI-PEAVQLVLQAGA---IAKGGEIFVLDMGEPV 482 (588)
T ss_pred HcCCCccccCCCceeEEEEH-HHHHHHHHHHHh---hcCCCcEEEEcCCCCe
Confidence 343332 12 2233 377777776553 2456899999987654
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.2e-07 Score=83.74 Aligned_cols=176 Identities=9% Similarity=0.114 Sum_probs=112.1
Q ss_pred cceEEEEecCCccchhH-HHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGA-FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.+++++.+|++|. ++ +++++ .++|+|||+|+...+.. ...+.+..+++|+.++..+++++...
T Consensus 360 ~~~~~~~gDl~d~--~~~l~~~l-------~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~~t~~ll~a~~~~-- 423 (660)
T PRK08125 360 PRFHFVEGDISIH--SEWIEYHI-------KKCDVVLPLVAIATPIE-----YTRNPLRVFELDFEENLKIIRYCVKY-- 423 (660)
T ss_pred CceEEEeccccCc--HHHHHHHh-------cCCCEEEECccccCchh-----hccCHHHHHHhhHHHHHHHHHHHHhc--
Confidence 3688899999986 44 22222 25899999999753211 11223456789999999999887642
Q ss_pred hcCCCCeEEEeecccccccC---CC-------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAERG---LY-------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---~~-------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
+.++|++||...+-.. +. .+...|+.+|.+.+.+++.+++++ |+++..++|+.+.++
T Consensus 424 ----~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp 496 (660)
T PRK08125 424 ----NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGP 496 (660)
T ss_pred ----CCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCC
Confidence 2579999997544110 00 122469999999999999987664 789999999999887
Q ss_pred CCcccc-----chHHHHHHH---HhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 152 EYPIAV-----GQERAVKLV---REAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 152 ~~~~~~-----~~~~~~~~~---~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...... ......... ....+ .+.+...+ |++++++.++........|+++++.+|.
T Consensus 497 ~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~-Dva~a~~~~l~~~~~~~~g~iyni~~~~ 569 (660)
T PRK08125 497 RLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR-DGIEALFRIIENKDNRCDGQIINIGNPD 569 (660)
T ss_pred CccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH-HHHHHHHHHHhccccccCCeEEEcCCCC
Confidence 532110 001111111 01111 12244555 9999998888543223468899998874
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-07 Score=73.53 Aligned_cols=167 Identities=14% Similarity=0.077 Sum_probs=95.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.+++++.+|+++. . .. +.+.+ .++|++|+++|......+. ..+++|..++..+++++.
T Consensus 62 ~~~~~~~~Dl~d~--~--~~----l~~~~~~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~---- 120 (251)
T PLN00141 62 PSLQIVRADVTEG--S--DK----LVEAIGDDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR---- 120 (251)
T ss_pred CceEEEEeeCCCC--H--HH----HHHHhhcCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----
Confidence 4688999999974 2 12 22223 3699999998864211111 113567777778777763
Q ss_pred hcCCCCeEEEeecccccccC-CCCCcchhHHhHHHHHHHHHHHHHH--hCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERG-LYPGAAAYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-~~~~~~~y~~sK~a~~~l~~~l~~e--~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+.+ .++||++||...+... ..+....|...|.+...+...+..| +...|++++.|+||++.++.........
T Consensus 121 ~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~---- 195 (251)
T PLN00141 121 KAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME---- 195 (251)
T ss_pred HcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC----
Confidence 333 5799999998643110 1223345666565444333222222 4567899999999999876432211000
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
...........++ |+|+.+..++.... -.+.++.+-+
T Consensus 196 --~~~~~~~~~i~~~-dvA~~~~~~~~~~~--~~~~~~~~~~ 232 (251)
T PLN00141 196 --PEDTLYEGSISRD-QVAEVAVEALLCPE--SSYKVVEIVA 232 (251)
T ss_pred --CCCccccCcccHH-HHHHHHHHHhcChh--hcCcEEEEec
Confidence 0001112234555 99999999986432 2345555544
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.5e-08 Score=79.14 Aligned_cols=176 Identities=13% Similarity=0.057 Sum_probs=107.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|. +++.++++ .+|.++|.|+...... ... .......+|+.++.++++++... .
T Consensus 108 ~~~~v~~Dl~d~--~~l~~~i~-------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~ 170 (367)
T PLN02686 108 GIWTVMANLTEP--ESLHEAFD-------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRT---E 170 (367)
T ss_pred ceEEEEcCCCCH--HHHHHHHH-------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---C
Confidence 578899999998 77777765 3689999998752221 110 11234567888888888886532 1
Q ss_pred CCCCeEEEeecccc--cc---cCC----------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 90 KAGGSIVFLTSIIG--AE---RGL----------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 90 ~~~g~iv~iss~~~--~~---~~~----------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
+ -.++|++||..+ +. ... ..+...|+.+|.+.+.+++.++++ .|+++++++|+.+
T Consensus 171 ~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~v 246 (367)
T PLN02686 171 S-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALV 246 (367)
T ss_pred C-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCce
Confidence 1 358999999631 10 000 012346999999999999988776 4899999999999
Q ss_pred cCCCCccccchHHHHHHHHhhcCC-----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 149 LQDEYPIAVGQERAVKLVREAAPL-----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 149 ~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.+|........... .......++ ..+...+ |++++++.++........|+.+ +.+|..
T Consensus 247 yGp~~~~~~~~~~~-~~~~g~~~~~g~g~~~~v~V~-Dva~A~~~al~~~~~~~~~~~y-i~~g~~ 309 (367)
T PLN02686 247 TGPGFFRRNSTATI-AYLKGAQEMLADGLLATADVE-RLAEAHVCVYEAMGNKTAFGRY-ICFDHV 309 (367)
T ss_pred ECCCCCCCCChhHH-HHhcCCCccCCCCCcCeEEHH-HHHHHHHHHHhccCCCCCCCcE-EEeCCC
Confidence 99864321111111 111111111 1234454 9999998887531112245555 544443
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-07 Score=74.68 Aligned_cols=168 Identities=17% Similarity=0.148 Sum_probs=105.3
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|+.+. +++.++++.. .+|++||+|+.. ... ......+..+++|+.++..+++++.. . +.+
T Consensus 33 ~~d~~~~--~~~~~~~~~~-----~~d~vi~~a~~~-~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~ 94 (287)
T TIGR01214 33 QLDLTDP--EALERLLRAI-----RPDAVVNTAAYT-DVD----GAESDPEKAFAVNALAPQNLARAAAR----H--GAR 94 (287)
T ss_pred ccCCCCH--HHHHHHHHhC-----CCCEEEECCccc-ccc----ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCe
Confidence 4688888 7777776642 589999999974 211 11223566788999999999988643 2 248
Q ss_pred EEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 95 IVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 95 iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+|++||...+.. .+..+...|+.+|.+.+.+++.+ +.++.+++|+.+.++........... ..
T Consensus 95 ~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~-~~ 166 (287)
T TIGR01214 95 LVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTML-RL 166 (287)
T ss_pred EEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHH-HH
Confidence 999999754311 00124568999999999988865 35789999999988764221111111 11
Q ss_pred HHhhcCC-------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPL-------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....+. ..+...+ |+++++..++... ...++++++.++..++
T Consensus 167 ~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~~--~~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 167 AGRGEELRVVDDQIGSPTYAK-DLARVIAALLQRL--ARARGVYHLANSGQCS 216 (287)
T ss_pred hhcCCCceEecCCCcCCcCHH-HHHHHHHHHHhhc--cCCCCeEEEECCCCcC
Confidence 1111111 1122334 9999999988542 1235678887665443
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-07 Score=76.18 Aligned_cols=175 Identities=10% Similarity=0.007 Sum_probs=110.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++.+|+++. +.+..+++ ++|+|||+|+.... ..... .+....+..|+.++.++++++... +
T Consensus 66 ~~~~~~Dl~d~--~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~~---~~~~~~~~~N~~~t~nll~aa~~~----~ 128 (370)
T PLN02695 66 HEFHLVDLRVM--ENCLKVTK-------GVDHVFNLAADMGG-MGFIQ---SNHSVIMYNNTMISFNMLEAARIN----G 128 (370)
T ss_pred ceEEECCCCCH--HHHHHHHh-------CCCEEEEcccccCC-ccccc---cCchhhHHHHHHHHHHHHHHHHHh----C
Confidence 56788899987 66555442 48999999986422 11111 122345677999998888877532 2
Q ss_pred CCCeEEEeecccccccC---------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 91 AGGSIVFLTSIIGAERG---------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~---------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
-+++|++||...+... +..+...|+.+|.+.+.+++.+++. .|+++..++|+.+.++....
T Consensus 129 -vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~ 204 (370)
T PLN02695 129 -VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTW 204 (370)
T ss_pred -CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCc
Confidence 3689999997543100 1235568999999999999987765 37999999999999875321
Q ss_pred c-----cchHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 156 A-----VGQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 156 ~-----~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ..............++ ..+...+ |++++++.++... .++.+++.+|..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~-D~a~ai~~~~~~~----~~~~~nv~~~~~~s 269 (370)
T PLN02695 205 KGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVS 269 (370)
T ss_pred cccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHH-HHHHHHHHHHhcc----CCCceEecCCCcee
Confidence 1 0111111111111111 1233444 9999999887532 25788998776543
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-07 Score=73.23 Aligned_cols=184 Identities=14% Similarity=0.102 Sum_probs=124.3
Q ss_pred CCCCCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHH
Q 027744 2 MGSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 2 ~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+++.....+..++..|+.++ ..+..++.. ..+|.++|.|+.......+ -+--..+..|+.++..|+++
T Consensus 50 l~~~~n~p~ykfv~~di~~~--~~~~~~~~~-----~~id~vihfaa~t~vd~s~-----~~~~~~~~nnil~t~~Lle~ 117 (331)
T KOG0747|consen 50 LEPVRNSPNYKFVEGDIADA--DLVLYLFET-----EEIDTVIHFAAQTHVDRSF-----GDSFEFTKNNILSTHVLLEA 117 (331)
T ss_pred hhhhccCCCceEeeccccch--HHHHhhhcc-----CchhhhhhhHhhhhhhhhc-----CchHHHhcCCchhhhhHHHH
Confidence 34556678899999999998 666665543 4799999999865322111 12234477899999999999
Q ss_pred HHHHHHhcCCCCeEEEeecccccc----------cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 82 VGRRMKESKAGGSIVFLTSIIGAE----------RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 82 ~~~~l~~~~~~g~iv~iss~~~~~----------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
++.... -.++|++|+...+- .....+...|+++|+|.+++.+++.+.+ |+.+..++-+-|.+|
T Consensus 118 ~~~sg~----i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP 190 (331)
T KOG0747|consen 118 VRVSGN----IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGP 190 (331)
T ss_pred HHhccC----eeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCC
Confidence 876542 35799999986541 1112356789999999999999999886 788999999999988
Q ss_pred CCccccchHHHHHHHHhh--cC-------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 152 EYPIAVGQERAVKLVREA--AP-------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.......-+.+....... .+ .+.+...+ |+++++-..+.. .-.|+++++..-.
T Consensus 191 ~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ve-D~~ea~~~v~~K---g~~geIYNIgtd~ 252 (331)
T KOG0747|consen 191 NQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVE-DVSEAFKAVLEK---GELGEIYNIGTDD 252 (331)
T ss_pred CcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHH-HHHHHHHHHHhc---CCccceeeccCcc
Confidence 765432222111211111 11 22234444 999998887754 2358999986543
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.2e-08 Score=81.03 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 74 ~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+.+..++..++.|.. +|+||++++..+. .....|+++|+++.+++|++++|+ +.+++++.+.|+.
T Consensus 101 ~~~~~~~~~l~~l~~---~griv~i~s~~~~-----~~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~------ 165 (450)
T PRK08261 101 ALYEFFHPVLRSLAP---CGRVVVLGRPPEA-----AADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP------ 165 (450)
T ss_pred HHHHHHHHHHHhccC---CCEEEEEcccccc-----CCchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC------
Confidence 445667777777753 6899999997664 234579999999999999999999 7799999998874
Q ss_pred ccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 154 PIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
..+. ++++++.|+++....+++|+++.++++..
T Consensus 166 ----------------------~~~~-~~~~~~~~l~s~~~a~~~g~~i~~~~~~~ 198 (450)
T PRK08261 166 ----------------------GAEA-GLESTLRFFLSPRSAYVSGQVVRVGAADA 198 (450)
T ss_pred ----------------------CCHH-HHHHHHHHhcCCccCCccCcEEEecCCcc
Confidence 1223 88999999999988999999999999875
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=6.4e-07 Score=71.71 Aligned_cols=172 Identities=17% Similarity=0.185 Sum_probs=111.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCC-cEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNL-DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+.++.+|+++. +....+++. . |.+||+|+....... ... .....+.+|+.++.++++++..
T Consensus 43 ~~~~~~~d~~~~--~~~~~~~~~-------~~d~vih~aa~~~~~~~---~~~-~~~~~~~~nv~gt~~ll~aa~~---- 105 (314)
T COG0451 43 GVEFVVLDLTDR--DLVDELAKG-------VPDAVIHLAAQSSVPDS---NAS-DPAEFLDVNVDGTLNLLEAARA---- 105 (314)
T ss_pred ccceeeecccch--HHHHHHHhc-------CCCEEEEccccCchhhh---hhh-CHHHHHHHHHHHHHHHHHHHHH----
Confidence 467888998886 555544442 3 999999997532211 111 3456889999999999999876
Q ss_pred cCCCCeEEEeecccccccC-----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 89 SKAGGSIVFLTSIIGAERG-----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~-----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+ ..++|+.||....... +..+...|+.+|.+.+.+++.+.. ..|+.+.+++|+.+..+......
T Consensus 106 ~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~ 181 (314)
T COG0451 106 AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDL 181 (314)
T ss_pred cC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCC
Confidence 22 4789996665533211 111222599999999999999888 45799999999998887765541
Q ss_pred c---hHH-HHHHHHhhcC---CC-------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 158 G---QER-AVKLVREAAP---LH-------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 158 ~---~~~-~~~~~~~~~~---~~-------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. ... ..... ...+ .. .+...+ |+++++..++..... + .+++.++.
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~-D~a~~~~~~~~~~~~---~-~~ni~~~~ 240 (314)
T COG0451 182 SSGVVSAFIRQLL-KGEPIIVIGGDGSQTRDFVYVD-DVADALLLALENPDG---G-VFNIGSGT 240 (314)
T ss_pred CcCcHHHHHHHHH-hCCCcceEeCCCceeEeeEeHH-HHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence 1 111 11111 2222 11 123344 999999999964332 3 88888875
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.9e-07 Score=70.12 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=101.5
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. +.+.+++.+. ++|++||+|++.. ... -..+-+..+.+|..++.++.+++... +..
T Consensus 33 ~~Ditd~--~~v~~~i~~~-----~PDvVIn~AAyt~-vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~ 94 (281)
T COG1091 33 ELDITDP--DAVLEVIRET-----RPDVVINAAAYTA-VDK----AESEPELAFAVNATGAENLARAAAEV------GAR 94 (281)
T ss_pred cccccCh--HHHHHHHHhh-----CCCEEEECccccc-ccc----ccCCHHHHHHhHHHHHHHHHHHHHHh------CCe
Confidence 3699999 8899998876 7999999999862 221 22345788999999999999998654 678
Q ss_pred EEEeecccccc--c-C------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 95 IVFLTSIIGAE--R-G------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 95 iv~iss~~~~~--~-~------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+|++|+-.... . + ...+...|+.||.+.+..++... -+..+++..++........ . ..+.+.
T Consensus 95 lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nF-v-~tml~l 165 (281)
T COG1091 95 LVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNF-V-KTMLRL 165 (281)
T ss_pred EEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCH-H-HHHHHH
Confidence 99999876431 1 1 12466789999999999998754 3456677777766544211 1 112222
Q ss_pred HHhhcCCCC----C--CCCchhHHHHHHHhccCC
Q 027744 166 VREAAPLHR----W--LDVKNDLASTVIYLISDG 193 (219)
Q Consensus 166 ~~~~~~~~~----~--~~~~~dva~~~~~l~s~~ 193 (219)
.....+++. + ++..+|+|+++..++...
T Consensus 166 a~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~ 199 (281)
T COG1091 166 AKEGKELKVVDDQYGSPTYTEDLADAILELLEKE 199 (281)
T ss_pred hhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence 222222211 1 233359999999988653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.4e-07 Score=71.61 Aligned_cols=114 Identities=13% Similarity=0.029 Sum_probs=78.3
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
..|++|. +++.++++.. ++|+|||+|+...... ..++-+..+.+|+.++.++++++... +.+
T Consensus 37 ~~Dl~d~--~~~~~~~~~~-----~~D~Vih~Aa~~~~~~-----~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~ 98 (299)
T PRK09987 37 CGDFSNP--EGVAETVRKI-----RPDVIVNAAAHTAVDK-----AESEPEFAQLLNATSVEAIAKAANEV------GAW 98 (299)
T ss_pred cCCCCCH--HHHHHHHHhc-----CCCEEEECCccCCcch-----hhcCHHHHHHHHHHHHHHHHHHHHHc------CCe
Confidence 4688888 7777766642 5899999999753211 11223556788999999999887642 357
Q ss_pred EEEeecccccc---------cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 95 IVFLTSIIGAE---------RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 95 iv~iss~~~~~---------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+|++||...+. ..+..+...|+.+|.+.+.+++.+.. +...++|+++.++..
T Consensus 99 ~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~~ 159 (299)
T PRK09987 99 VVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAGKG 159 (299)
T ss_pred EEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecCCCC
Confidence 99999965431 11123456899999999999876432 347888888887643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.1e-06 Score=71.26 Aligned_cols=153 Identities=14% Similarity=0.075 Sum_probs=97.2
Q ss_pred CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC-----------
Q 027744 39 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG----------- 107 (219)
Q Consensus 39 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~----------- 107 (219)
.+|+|||+|+...+. . ...+....+++|+.++.++++++... +.++|++||...+...
T Consensus 183 ~~D~ViHlAa~~~~~-~----~~~~p~~~~~~Nv~gt~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E~~~~ 251 (442)
T PLN02206 183 EVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSEVYGDPLQHPQVETYWG 251 (442)
T ss_pred CCCEEEEeeeecchh-h----hhcCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECChHHhCCCCCCCCCccccc
Confidence 489999999864221 1 11123567899999999999987542 2489999998754110
Q ss_pred ---CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---hHHHHHHHHhhcCC---------
Q 027744 108 ---LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPL--------- 172 (219)
Q Consensus 108 ---~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~--------- 172 (219)
+..+...|+.+|.+.+.+++.+.+.. ++++..++|+.+..+....... ........ ...+.
T Consensus 252 ~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l-~~~~i~i~g~G~~~ 327 (442)
T PLN02206 252 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL-RKEPLTVYGDGKQT 327 (442)
T ss_pred cCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCccccchHHHHHHHHH-cCCCcEEeCCCCEE
Confidence 11224679999999999999876653 7899999998888765321110 11111111 11111
Q ss_pred CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 173 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+.+...+ |+++++..++... .+..+++.+|..+.
T Consensus 328 rdfi~V~-Dva~ai~~a~e~~----~~g~yNIgs~~~~s 361 (442)
T PLN02206 328 RSFQFVS-DLVEGLMRLMEGE----HVGPFNLGNPGEFT 361 (442)
T ss_pred EeEEeHH-HHHHHHHHHHhcC----CCceEEEcCCCcee
Confidence 1133444 9999998887432 23479998776543
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.1e-06 Score=68.36 Aligned_cols=125 Identities=21% Similarity=0.264 Sum_probs=71.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++..|++++.-.--....+++.+ .+|++||||+......+ ++...++|+.|+..+++.+..
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~~--------~~~~~~~NV~gt~~ll~la~~--- 124 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVIIHCAASVNFNAP--------YSELRAVNVDGTRNLLRLAAQ--- 124 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHH---H--EEEE--SS-SBS-S----------EEHHHHHHHHHHHHHHHTS---
T ss_pred hccEEEEeccccccccCCChHHhhcccc---ccceeeecchhhhhccc--------chhhhhhHHHHHHHHHHHHHh---
Confidence 5689999999998621011222333332 48999999997643333 334578899999999988752
Q ss_pred hcCCCCeEEEeeccccc--ccC----------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 88 ESKAGGSIVFLTSIIGA--ERG----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~--~~~----------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
.+ ..+++++||.... ..+ .......|..||...|.+++..+++ .|+.+.+++||.+.
T Consensus 125 -~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~ 199 (249)
T PF07993_consen 125 -GK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIV 199 (249)
T ss_dssp -SS----EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE
T ss_pred -cc-CcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccc
Confidence 22 3589999993221 010 0123357999999999999998876 37889999999888
Q ss_pred CC
Q 027744 150 QD 151 (219)
Q Consensus 150 t~ 151 (219)
++
T Consensus 200 g~ 201 (249)
T PF07993_consen 200 GD 201 (249)
T ss_dssp -S
T ss_pred cc
Confidence 74
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-06 Score=74.74 Aligned_cols=174 Identities=11% Similarity=0.028 Sum_probs=107.9
Q ss_pred cceEEEEecCCccc-----hhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDR-----EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~-----~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
.+++++..|+++++ .+..+.++ ..+|+|||+|+.... .+..+..+.+|+.++..+++.+.
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v~~--------~~~~~~~~~~Nv~gt~~ll~~a~ 148 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATTNF--------DERYDVALGINTLGALNVLNFAK 148 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHH-------hCCCEEEECccccCC--------cCCHHHHHHHHHHHHHHHHHHHH
Confidence 57899999998531 02233332 258999999997521 12356788999999999998875
Q ss_pred HHHHhcCCCCeEEEeecccccccCC-------------------------------------------------------
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGL------------------------------------------------------- 108 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~------------------------------------------------------- 108 (219)
..- + -.++|++||...+-...
T Consensus 149 ~~~---~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (491)
T PLN02996 149 KCV---K-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGM 224 (491)
T ss_pred hcC---C-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhch
Confidence 421 1 35799999876541100
Q ss_pred -----CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---h-----HHHHHHHHhhcC----
Q 027744 109 -----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---Q-----ERAVKLVREAAP---- 171 (219)
Q Consensus 109 -----~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~-----~~~~~~~~~~~~---- 171 (219)
......|+.+|++.+.+++..+ .++.+.+++|+.|.++....... . ...........+
T Consensus 225 ~~~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~g 299 (491)
T PLN02996 225 ERAKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLA 299 (491)
T ss_pred hHHHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEec
Confidence 0012359999999999997643 27999999999998875432111 0 011111111111
Q ss_pred ----CCCCCCCchhHHHHHHHhccCCC-CcccceEEEecCC
Q 027744 172 ----LHRWLDVKNDLASTVIYLISDGS-RYMTGTTIYVDGA 207 (219)
Q Consensus 172 ----~~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgG 207 (219)
...+...+ +++++++.++.... ....++++++.+|
T Consensus 300 dg~~~~D~v~Vd-dvv~a~l~a~~~~~~~~~~~~vYNi~s~ 339 (491)
T PLN02996 300 DPNSVLDVIPAD-MVVNAMIVAMAAHAGGQGSEIIYHVGSS 339 (491)
T ss_pred CCCeecceeccc-HHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence 12334444 99999887775321 1124688999988
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.5e-06 Score=70.11 Aligned_cols=153 Identities=12% Similarity=0.088 Sum_probs=97.7
Q ss_pred CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccccccc------------
Q 027744 39 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER------------ 106 (219)
Q Consensus 39 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~------------ 106 (219)
++|+|||+|+...+.. . . .+-...+.+|+.++..+++++... +.++|++||...+..
T Consensus 184 ~~D~ViHlAa~~~~~~-~-~---~~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~VYg~~~~~p~~E~~~~ 252 (436)
T PLN02166 184 EVDQIYHLACPASPVH-Y-K---YNPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEVYGDPLEHPQKETYWG 252 (436)
T ss_pred CCCEEEECceeccchh-h-c---cCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHHhCCCCCCCCCccccc
Confidence 5899999998642211 1 1 123567889999999999887643 247999999865411
Q ss_pred --CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---hHHHHHHHHhhcCC---------
Q 027744 107 --GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPL--------- 172 (219)
Q Consensus 107 --~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~--------- 172 (219)
.+..+...|+.+|.+.+.+++.+.+.. ++++..++|+.+.++....... ........ ...+.
T Consensus 253 ~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l-~~~~i~v~g~g~~~ 328 (436)
T PLN02166 253 NVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTI-RKQPMTVYGDGKQT 328 (436)
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCCCCCCccchHHHHHHHHh-cCCCcEEeCCCCeE
Confidence 011234579999999999999887653 7899999999888875321100 11111111 11221
Q ss_pred CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 173 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+.+... +|+++++..++... .+.++++.+|..+.
T Consensus 329 rdfi~V-~Dva~ai~~~~~~~----~~giyNIgs~~~~S 362 (436)
T PLN02166 329 RSFQYV-SDLVDGLVALMEGE----HVGPFNLGNPGEFT 362 (436)
T ss_pred EeeEEH-HHHHHHHHHHHhcC----CCceEEeCCCCcEe
Confidence 123333 49999999887432 23589998776543
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=98.56 E-value=6.6e-07 Score=74.15 Aligned_cols=162 Identities=15% Similarity=0.126 Sum_probs=102.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++..+++.+ .+++|+||||++.. ... . ...+++|+.++.++++++. +
T Consensus 111 ~~v~~v~~Dl~d~--~~l~~~~~~~---~~~~D~Vi~~aa~~-~~~-----~----~~~~~vn~~~~~~ll~aa~----~ 171 (390)
T PLN02657 111 PGAEVVFGDVTDA--DSLRKVLFSE---GDPVDVVVSCLASR-TGG-----V----KDSWKIDYQATKNSLDAGR----E 171 (390)
T ss_pred CCceEEEeeCCCH--HHHHHHHHHh---CCCCcEEEECCccC-CCC-----C----ccchhhHHHHHHHHHHHHH----H
Confidence 4688999999999 8888887643 12699999998853 111 0 1224567777777777653 3
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
.+ -+++|++||.... .+...|..+|...+...+. ...+++..+++|+.+..++.. ...... .
T Consensus 172 ~g-v~r~V~iSS~~v~-----~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~------~~~~~~-~ 233 (390)
T PLN02657 172 VG-AKHFVLLSAICVQ-----KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGG------QVEIVK-D 233 (390)
T ss_pred cC-CCEEEEEeecccc-----CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHH------HHHhhc-c
Confidence 33 4689999998653 3345688889888877654 246899999999876643211 111110 1
Q ss_pred hcC---CC-------CCCCCchhHHHHHHHhccCCCCcccceEEEecC-Cccc
Q 027744 169 AAP---LH-------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG-AQSI 210 (219)
Q Consensus 169 ~~~---~~-------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~~ 210 (219)
..+ .+ .+...+ |+|+.++.++.+. ...|+++++.| |..+
T Consensus 234 g~~~~~~GdG~~~~~~~I~v~-DlA~~i~~~~~~~--~~~~~~~~Iggp~~~~ 283 (390)
T PLN02657 234 GGPYVMFGDGKLCACKPISEA-DLASFIADCVLDE--SKINKVLPIGGPGKAL 283 (390)
T ss_pred CCceEEecCCcccccCceeHH-HHHHHHHHHHhCc--cccCCEEEcCCCCccc
Confidence 111 11 113334 9999988887532 23578999987 3443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.2e-06 Score=77.38 Aligned_cols=177 Identities=15% Similarity=0.104 Sum_probs=107.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|.+........+++ .++|++||+|+.... . .+ .....++|+.++.++++.+..
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~-~----~~---~~~~~~~nv~gt~~ll~~a~~---- 114 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDL-T----AD---EEAQRAANVDGTRNVVELAER---- 114 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecC-C----CC---HHHHHHHHhHHHHHHHHHHHh----
Confidence 4688999999985101111222222 469999999997421 1 12 345678899998888887643
Q ss_pred cCCCCeEEEeecccccccC-----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 89 SKAGGSIVFLTSIIGAERG-----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~-----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+ ..++|++||...+... +......|+.+|...+.+++. ..|+++.+++|+.+.++......
T Consensus 115 ~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~ 187 (657)
T PRK07201 115 LQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEM 187 (657)
T ss_pred cC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCcc
Confidence 22 4689999997654110 011235699999999998863 24799999999999876322110
Q ss_pred ----chHHHHHHHHh--hcC----C-------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 ----GQERAVKLVRE--AAP----L-------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ----~~~~~~~~~~~--~~~----~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........... ..+ . ..+... +|+++++..++.. ....|+++++.++..+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-ddva~ai~~~~~~--~~~~g~~~ni~~~~~~s 255 (657)
T PRK07201 188 DKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPV-DYVADALDHLMHK--DGRDGQTFHLTDPKPQR 255 (657)
T ss_pred ccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeH-HHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc
Confidence 00001011100 011 0 011223 4899999988853 34578999998876544
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.5e-06 Score=67.82 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=84.5
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.+++.|+.|. +.+++++++- ++|.+||.||..... -+.++-.+.++.|+.++..|++++...-
T Consensus 46 ~~f~~gDi~D~--~~L~~vf~~~-----~idaViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~g---- 109 (329)
T COG1087 46 FKFYEGDLLDR--ALLTAVFEEN-----KIDAVVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQTG---- 109 (329)
T ss_pred CceEEeccccH--HHHHHHHHhc-----CCCEEEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHhC----
Confidence 58999999998 7777777653 799999999975322 2556677889999999999999876543
Q ss_pred CCCeEEEeeccccc---------ccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEee
Q 027744 91 AGGSIVFLTSIIGA---------ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144 (219)
Q Consensus 91 ~~g~iv~iss~~~~---------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~ 144 (219)
-.+|||=||.+.+ +..+..+...|+.+|...+.+.+-+++... .++.+++
T Consensus 110 -v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~---~~~v~LR 168 (329)
T COG1087 110 -VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP---FKVVILR 168 (329)
T ss_pred -CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC---CcEEEEE
Confidence 3567777776654 111234667999999999999999988764 4554444
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.3e-05 Score=62.67 Aligned_cols=173 Identities=12% Similarity=0.119 Sum_probs=95.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
|.++.....|+.+. +.+...++. .++|++||+||...... .+...++-...+++|+.++.++++++...
T Consensus 33 g~~V~~~~~~~~~~--~~v~~~l~~-----~~~D~ViH~Aa~~~~~~--~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-- 101 (298)
T PLN02778 33 GIDFHYGSGRLENR--ASLEADIDA-----VKPTHVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRER-- 101 (298)
T ss_pred CCEEEEecCccCCH--HHHHHHHHh-----cCCCEEEECCcccCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence 44566566778776 555555443 25899999999753211 01122345678899999999999998653
Q ss_pred hcCCCCeEEEeecccccc-------------c---CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAE-------------R---GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~-------------~---~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
+-+.+++||...+. . .+.++...|+.+|.+.+.+++.++.. .++|+ ++...+
T Consensus 102 ----gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~-----~~~~~~ 169 (298)
T PLN02778 102 ----GLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV-----RMPISS 169 (298)
T ss_pred ----CCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee-----cccCCc
Confidence 12345555433210 0 01122367999999999999886532 23443 322221
Q ss_pred CCccccchHHHHHHHHhhcC---C-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 152 EYPIAVGQERAVKLVREAAP---L-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
-.. .......... ...+ . +.+.... |++++++.++... .+ ..+++.+|..++
T Consensus 170 ~~~--~~~~fi~~~~-~~~~~~~~~~s~~yv~-D~v~al~~~l~~~---~~-g~yNigs~~~iS 225 (298)
T PLN02778 170 DLS--NPRNFITKIT-RYEKVVNIPNSMTILD-ELLPISIEMAKRN---LT-GIYNFTNPGVVS 225 (298)
T ss_pred ccc--cHHHHHHHHH-cCCCeeEcCCCCEEHH-HHHHHHHHHHhCC---CC-CeEEeCCCCccc
Confidence 100 0011111211 1111 1 1133344 8888888887432 23 489997776544
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.6e-06 Score=73.81 Aligned_cols=142 Identities=17% Similarity=0.242 Sum_probs=93.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|++||+|+.... .+++|+.++.++++++. +.
T Consensus 41 ~v~~v~gDL~D~--~~l~~al~-------~vD~VVHlAa~~~~--------------~~~vNv~GT~nLLeAa~----~~ 93 (854)
T PRK05865 41 SADFIAADIRDA--TAVESAMT-------GADVVAHCAWVRGR--------------NDHINIDGTANVLKAMA----ET 93 (854)
T ss_pred CceEEEeeCCCH--HHHHHHHh-------CCCEEEECCCcccc--------------hHHHHHHHHHHHHHHHH----Hc
Confidence 578899999998 77776664 48999999986311 35788888887776653 33
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH-h
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR-E 168 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~ 168 (219)
+ .++||++||.. |.+.+.+++. .++.+..++|+.+.++..... ...... .
T Consensus 94 g-vkr~V~iSS~~----------------K~aaE~ll~~-------~gl~~vILRp~~VYGP~~~~~-----i~~ll~~~ 144 (854)
T PRK05865 94 G-TGRIVFTSSGH----------------QPRVEQMLAD-------CGLEWVAVRCALIFGRNVDNW-----VQRLFALP 144 (854)
T ss_pred C-CCeEEEECCcH----------------HHHHHHHHHH-------cCCCEEEEEeceEeCCChHHH-----HHHHhcCc
Confidence 3 46899999842 7777766532 479999999999987742211 111110 0
Q ss_pred hcCCC------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLH------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+.+ .+...+ |+++++..++... ...|.++++.+|..+
T Consensus 145 v~~~G~~~~~~dfIhVd-DVA~Ai~~aL~~~--~~~ggvyNIgsg~~~ 189 (854)
T PRK05865 145 VLPAGYADRVVQVVHSD-DAQRLLVRALLDT--VIDSGPVNLAAPGEL 189 (854)
T ss_pred eeccCCCCceEeeeeHH-HHHHHHHHHHhCC--CcCCCeEEEECCCcc
Confidence 01111 234455 9999998887432 223667999877654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.4e-06 Score=66.38 Aligned_cols=158 Identities=16% Similarity=0.150 Sum_probs=97.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|+ +++..+++ ++|++||+++.. . . +.....++|+.++.++++++.. .
T Consensus 44 ~v~~v~~Dl~d~--~~l~~al~-------g~d~Vi~~~~~~-~-~--------~~~~~~~~~~~~~~~l~~aa~~----~ 100 (317)
T CHL00194 44 GAELVYGDLSLP--ETLPPSFK-------GVTAIIDASTSR-P-S--------DLYNAKQIDWDGKLALIEAAKA----A 100 (317)
T ss_pred CCEEEECCCCCH--HHHHHHHC-------CCCEEEECCCCC-C-C--------CccchhhhhHHHHHHHHHHHHH----c
Confidence 578999999998 77666554 589999987642 1 1 1123456777777777777653 2
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ -.++|++||..+. . .+...|..+|...+.+.+ ..++....++|+.+...+.... ..... ..
T Consensus 101 g-vkr~I~~Ss~~~~-~---~~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~-----~~~~~-~~ 162 (317)
T CHL00194 101 K-IKRFIFFSILNAE-Q---YPYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQY-----AIPIL-EK 162 (317)
T ss_pred C-CCEEEEecccccc-c---cCCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhh-----hhhhc-cC
Confidence 2 3589999986443 1 123467888888776654 2478899999985543221110 00000 00
Q ss_pred cC--------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 170 AP--------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 170 ~~--------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+ ...+...+ |+|++++.++.... ..|+++++.|+..++
T Consensus 163 ~~~~~~~~~~~~~~i~v~-Dva~~~~~~l~~~~--~~~~~~ni~g~~~~s 209 (317)
T CHL00194 163 QPIWITNESTPISYIDTQ-DAAKFCLKSLSLPE--TKNKTFPLVGPKSWN 209 (317)
T ss_pred CceEecCCCCccCccCHH-HHHHHHHHHhcCcc--ccCcEEEecCCCccC
Confidence 00 01123334 99999998885422 358999999887654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=98.26 E-value=6.3e-06 Score=65.47 Aligned_cols=169 Identities=17% Similarity=0.197 Sum_probs=93.6
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. +++.+++++. ++|++||+||.... +.-..+-+..+.+|+.++..+.+.+... +.+
T Consensus 34 ~~dl~d~--~~~~~~~~~~-----~pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~ 95 (286)
T PF04321_consen 34 DLDLTDP--EAVAKLLEAF-----KPDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKER------GAR 95 (286)
T ss_dssp CS-TTSH--HHHHHHHHHH-------SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHHC------T-E
T ss_pred hcCCCCH--HHHHHHHHHh-----CCCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHHc------CCc
Confidence 6788888 7888877765 58999999998521 1122346678999999999999888642 578
Q ss_pred EEEeeccccccc---C------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 95 IVFLTSIIGAER---G------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 95 iv~iss~~~~~~---~------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+|++||...... . +..+...|+.+|...|..++... -+..+++++++..+... .+..... ..
T Consensus 96 li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~~~~-~~~~~~~-~~ 166 (286)
T PF04321_consen 96 LIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC-------PNALILRTSWVYGPSGR-NFLRWLL-RR 166 (286)
T ss_dssp EEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH--------SSEEEEEE-SEESSSSS-SHHHHHH-HH
T ss_pred EEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhc-------CCEEEEecceecccCCC-chhhhHH-HH
Confidence 999999864411 0 11345789999999999888621 15788899988877221 1111111 11
Q ss_pred HHhhcCCC----CC--CCCchhHHHHHHHhccCCCC-cccceEEEecCCccc
Q 027744 166 VREAAPLH----RW--LDVKNDLASTVIYLISDGSR-YMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~----~~--~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgG~~~ 210 (219)
.....++. .+ ++..+|+|+.+..++..... .....++++.|...+
T Consensus 167 ~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~ 218 (286)
T PF04321_consen 167 LRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERV 218 (286)
T ss_dssp HHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-E
T ss_pred HhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCccc
Confidence 11222111 11 11125999999998864211 112467777766543
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.8e-05 Score=72.77 Aligned_cols=179 Identities=17% Similarity=0.187 Sum_probs=106.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++++...--....+++ ...+|++||+|+.... ..+ +......|+.++..+++.+.. .
T Consensus 1035 ~i~~~~gDl~~~~lgl~~~~~~~l---~~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~----~ 1099 (1389)
T TIGR03443 1035 RIEVVLGDLSKEKFGLSDEKWSDL---TNEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAE----G 1099 (1389)
T ss_pred ceEEEeccCCCccCCcCHHHHHHH---HhcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHh----C
Confidence 688999999865100011122222 2368999999997521 112 344556799999999887743 2
Q ss_pred CCCCeEEEeeccccccc----------------C----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEe
Q 027744 90 KAGGSIVFLTSIIGAER----------------G----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~----------------~----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i 143 (219)
+ ..+++++||...+.. + .......|+.+|.+.+.+++.++. .|+.+.++
T Consensus 1100 ~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~ 1174 (1389)
T TIGR03443 1100 K-AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIV 1174 (1389)
T ss_pred C-CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEE
Confidence 2 468999999755310 0 001124599999999999987543 38999999
Q ss_pred ecCCccCCCCcccc-chHHHHHHHHhh-----cCC----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 144 ARGLHLQDEYPIAV-GQERAVKLVREA-----APL----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 144 ~pG~v~t~~~~~~~-~~~~~~~~~~~~-----~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
+||.|.++...... ............ .|. ..+... ++++++++.++........+.++++.++..
T Consensus 1175 Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~V-ddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443 1175 RPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPV-DHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred CCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccH-HHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence 99999876433221 122222222111 111 122333 499999998875432222346777776644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.1e-05 Score=63.36 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=86.9
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...+++++..|++.+.-.--+.-.+++. +.+|.+|||++......+ +.++-..|+.|+..+++.+.-
T Consensus 58 ~~~ri~vv~gDl~e~~lGL~~~~~~~La---~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~~-- 124 (382)
T COG3320 58 SADRVEVVAGDLAEPDLGLSERTWQELA---ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAAT-- 124 (382)
T ss_pred hcceEEEEecccccccCCCCHHHHHHHh---hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHhc--
Confidence 3568999999999541111112222222 358999999997632222 455677899999998887642
Q ss_pred HhcCCCCeEEEeecccccccC------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 87 KESKAGGSIVFLTSIIGAERG------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
++.+.+.+|||++..... .....+.|+.||.+.|-+++..... |.++.+++||++
T Consensus 125 ---gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I 197 (382)
T COG3320 125 ---GKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYI 197 (382)
T ss_pred ---CCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCee
Confidence 224559999998764110 0123368999999999999876554 899999999999
Q ss_pred cCCCC
Q 027744 149 LQDEY 153 (219)
Q Consensus 149 ~t~~~ 153 (219)
..+-.
T Consensus 198 ~gds~ 202 (382)
T COG3320 198 TGDSR 202 (382)
T ss_pred eccCc
Confidence 87755
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.5e-05 Score=60.26 Aligned_cols=178 Identities=15% Similarity=0.167 Sum_probs=113.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++..+++|+.+. .++..+++ +. .+||+|+.. .+. ....+-+..+++|+.|+.++..++...-
T Consensus 54 ~~~v~~~~~D~~~~--~~i~~a~~-------~~-~Vvh~aa~~-~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~~- 117 (361)
T KOG1430|consen 54 SGRVTVILGDLLDA--NSISNAFQ-------GA-VVVHCAASP-VPD----FVENDRDLAMRVNVNGTLNVIEACKELG- 117 (361)
T ss_pred CCceeEEecchhhh--hhhhhhcc-------Cc-eEEEecccc-Ccc----ccccchhhheeecchhHHHHHHHHHHhC-
Confidence 56788999999998 66666554 45 778877753 222 2223567889999999999888876542
Q ss_pred hcCCCCeEEEeecccccccC----------CCC--CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 88 ESKAGGSIVFLTSIIGAERG----------LYP--GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~----------~~~--~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
-.++|++||......+ +++ ....|+.+|+-.|.+++.... ..+....+++|..|.+|....
T Consensus 118 ----v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 118 ----VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred ----CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc
Confidence 3689999987654221 122 224899999999999998765 446899999999999987776
Q ss_pred ccchHHHHHHHHhhcCCCCCCCCc--------hhHH--H--HHHHhccCCCCcccceEEEecCCcccc
Q 027744 156 AVGQERAVKLVREAAPLHRWLDVK--------NDLA--S--TVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~--------~dva--~--~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+.- .............+..+ +-++ . +...|.+ ....++||.+.++-|....
T Consensus 191 ~~~~i--~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~ 255 (361)
T KOG1430|consen 191 LLPKI--VEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLD-KSPSVNGQFYFITDDTPVR 255 (361)
T ss_pred ccHHH--HHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcch
Confidence 54321 11111111111101110 1122 2 2223333 5778899999998777554
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.1e-05 Score=62.00 Aligned_cols=110 Identities=16% Similarity=0.214 Sum_probs=84.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++..|+.|. +.+++++++. .+|.|+|-|+...... +.+...+..+.|+.|++.++..+..+
T Consensus 53 ~~~v~f~~~Dl~D~--~~L~kvF~~~-----~fd~V~Hfa~~~~vge-----S~~~p~~Y~~nNi~gtlnlLe~~~~~-- 118 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDA--EALEKLFSEV-----KFDAVMHFAALAAVGE-----SMENPLSYYHNNIAGTLNLLEVMKAH-- 118 (343)
T ss_pred CCceEEEEeccCCH--HHHHHHHhhc-----CCceEEeehhhhccch-----hhhCchhheehhhhhHHHHHHHHHHc--
Confidence 57899999999999 8888887765 4999999999753222 33444778899999999998876544
Q ss_pred hcCCCCeEEEeecccccc---------cCCC-CCcchhHHhHHHHHHHHHHHHHHhC
Q 027744 88 ESKAGGSIVFLTSIIGAE---------RGLY-PGAAAYGACAASIHQLVRTAAMEIG 134 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~---------~~~~-~~~~~y~~sK~a~~~l~~~l~~e~~ 134 (219)
+ -..+|+.||...+- ..+. .+...|+.+|.+++..++.+...+.
T Consensus 119 --~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 119 --N-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred --C-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence 3 46789988877551 1112 3778999999999999999888765
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0003 Score=62.49 Aligned_cols=118 Identities=13% Similarity=0.061 Sum_probs=76.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.+...|++|. +.+..+++.. ++|+|||+|+...... .+...++-+..+++|+.++.++++++...
T Consensus 405 ~~v~~~~~~l~d~--~~v~~~i~~~-----~pd~Vih~Aa~~~~~~--~~~~~~~~~~~~~~N~~gt~~l~~a~~~~--- 472 (668)
T PLN02260 405 IAYEYGKGRLEDR--SSLLADIRNV-----KPTHVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCREN--- 472 (668)
T ss_pred CeEEeeccccccH--HHHHHHHHhh-----CCCEEEECCcccCCCC--CChHHhCHHHHHHHHhHHHHHHHHHHHHc---
Confidence 3454567788888 7776666543 5899999999753211 11223455788899999999999998653
Q ss_pred cCCCCeEEEeecccccc---------c-------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEee
Q 027744 89 SKAGGSIVFLTSIIGAE---------R-------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~---------~-------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~ 144 (219)
+.+++++||...+. . .+.+....|+.+|.+.+.+++.+.+ ...+|+..+.
T Consensus 473 ---g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~ 538 (668)
T PLN02260 473 ---GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI 538 (668)
T ss_pred ---CCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence 23566666643210 0 0012236899999999999987642 2345665554
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.4e-05 Score=61.17 Aligned_cols=61 Identities=7% Similarity=0.105 Sum_probs=51.1
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
..||+++. ++++++++.+.+.++++|++|||||+. ...++.+.+.++|++++.. +.+.+.+
T Consensus 57 ~~~Dv~d~--~s~~~l~~~v~~~~g~iDiLVnnAgv~-d~~~~~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 57 PNLSIREI--ETTKDLLITLKELVQEHDILIHSMAVS-DYTPVYMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred CcceeecH--HHHHHHHHHHHHHcCCCCEEEECCEec-cccchhhCCHHHHhhhcch---hhhhccc
Confidence 45899999 999999999999999999999999985 7788889999999988554 4455554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00019 Score=52.90 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=84.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++++|+.|. +++.++++ +.|++|+++|.. .. + ...++.++..++
T Consensus 38 ~~~~~~~~~d~~d~--~~~~~al~-------~~d~vi~~~~~~-~~---------~------------~~~~~~~~~a~~ 86 (183)
T PF13460_consen 38 SPGVEIIQGDLFDP--DSVKAALK-------GADAVIHAAGPP-PK---------D------------VDAAKNIIEAAK 86 (183)
T ss_dssp CTTEEEEESCTTCH--HHHHHHHT-------TSSEEEECCHST-TT---------H------------HHHHHHHHHHHH
T ss_pred ccccccceeeehhh--hhhhhhhh-------hcchhhhhhhhh-cc---------c------------cccccccccccc
Confidence 46899999999998 77766654 689999999864 11 0 444556666666
Q ss_pred hcCCCCeEEEeecccccccCCC-------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLY-------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~-------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
+.+ -.+++++|+...+..... +....|...|...+.+.+ .++++...++|+++.++......-..
T Consensus 87 ~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------~~~~~~~ivrp~~~~~~~~~~~~~~~ 158 (183)
T PF13460_consen 87 KAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALR-------ESGLNWTIVRPGWIYGNPSRSYRLIK 158 (183)
T ss_dssp HTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHH-------HSTSEEEEEEESEEEBTTSSSEEEES
T ss_pred ccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHH-------hcCCCEEEEECcEeEeCCCcceeEEe
Confidence 655 579999999876632111 111245666655554442 34899999999998876533111000
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhcc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s 191 (219)
. ........... +|+|++++.++.
T Consensus 159 ~------~~~~~~~~i~~-~DvA~~~~~~l~ 182 (183)
T PF13460_consen 159 E------GGPQGVNFISR-EDVAKAIVEALE 182 (183)
T ss_dssp S------TSTTSHCEEEH-HHHHHHHHHHHH
T ss_pred c------cCCCCcCcCCH-HHHHHHHHHHhC
Confidence 0 00000112233 499999988763
|
... |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0018 Score=51.24 Aligned_cols=159 Identities=9% Similarity=0.155 Sum_probs=83.4
Q ss_pred HHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC-CCeEEEeeccccccc---CCC-
Q 027744 35 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAER---GLY- 109 (219)
Q Consensus 35 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~g~iv~iss~~~~~~---~~~- 109 (219)
+.+.++|++||+||...... ....+.....+++|+.++..+++++... +. ...+++.|+...+.. .+.
T Consensus 53 ~~~~~~D~Vvh~a~~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~i~~S~~~~yg~~~~~~~~ 125 (292)
T TIGR01777 53 EALEGADAVINLAGEPIADK---RWTEERKQEIRDSRIDTTRALVEAIAAA----EQKPKVFISASAVGYYGTSEDRVFT 125 (292)
T ss_pred hhcCCCCEEEECCCCCcccc---cCCHHHHHHHHhcccHHHHHHHHHHHhc----CCCceEEEEeeeEEEeCCCCCCCcC
Confidence 34467999999999642111 2344556677889999888888877542 21 123444444322210 000
Q ss_pred -----CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh--------hcCCCCCC
Q 027744 110 -----PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE--------AAPLHRWL 176 (219)
Q Consensus 110 -----~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 176 (219)
.+...|+..+...+...+. ....++.+.+++|+.+.++.... . . ........ ......+.
T Consensus 126 E~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~~~ilR~~~v~G~~~~~-~-~-~~~~~~~~~~~~~~g~~~~~~~~i 198 (292)
T TIGR01777 126 EEDSPAGDDFLAELCRDWEEAAQA----AEDLGTRVVLLRTGIVLGPKGGA-L-A-KMLPPFRLGLGGPLGSGRQWFSWI 198 (292)
T ss_pred cccCCCCCChHHHHHHHHHHHhhh----chhcCCceEEEeeeeEECCCcch-h-H-HHHHHHhcCcccccCCCCcccccE
Confidence 1111233333333333332 23357999999999998774211 1 1 10000100 01112334
Q ss_pred CCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 177 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+ |+++++..++... ... .++++.++..++
T Consensus 199 ~v~-Dva~~i~~~l~~~--~~~-g~~~~~~~~~~s 229 (292)
T TIGR01777 199 HIE-DLVQLILFALENA--SIS-GPVNATAPEPVR 229 (292)
T ss_pred eHH-HHHHHHHHHhcCc--ccC-CceEecCCCccC
Confidence 444 9999999998542 223 467887766543
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00025 Score=55.16 Aligned_cols=168 Identities=8% Similarity=-0.001 Sum_probs=110.8
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.+++++.+|++|. ..+.++++.+ .+|-+.|.|+-+... .+.++-+...+++..|+..++.+..-.-
T Consensus 53 ~~~~l~l~~gDLtD~--~~l~r~l~~v-----~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~ 120 (345)
T COG1089 53 NDPRLHLHYGDLTDS--SNLLRILEEV-----QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILG 120 (345)
T ss_pred CCceeEEEeccccch--HHHHHHHHhc-----Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhC
Confidence 355699999999999 8888888877 589999998865333 3444456678889999999998876543
Q ss_pred HhcCCCCeEEEeeccccc---------ccCCCCCcchhHHhHHHHHHHHHHHHHHhC---CCCeEEEEeecCCccCCCCc
Q 027744 87 KESKAGGSIVFLTSIIGA---------ERGLYPGAAAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~---------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~---~~gi~v~~i~pG~v~t~~~~ 154 (219)
. +..++..-||..-+ +..|+.+.+.|+++|.....++..++..+. ..||-+|.=.|.-=.|=..+
T Consensus 121 ~---~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTR 197 (345)
T COG1089 121 E---KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTR 197 (345)
T ss_pred C---cccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehH
Confidence 1 13566666665322 234567889999999999999999988875 46777776666422211111
Q ss_pred cccchHHHHHHH---------HhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 155 IAVGQERAVKLV---------REAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 155 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.... ...... .+....+.++... |..++...++..
T Consensus 198 KIt~--ava~Ik~G~q~~l~lGNldAkRDWG~A~-DYVe~mwlmLQq 241 (345)
T COG1089 198 KITR--AVARIKLGLQDKLYLGNLDAKRDWGHAK-DYVEAMWLMLQQ 241 (345)
T ss_pred HHHH--HHHHHHccccceEEeccccccccccchH-HHHHHHHHHHcc
Confidence 1110 000000 0112244567777 888888777765
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0036 Score=47.29 Aligned_cols=171 Identities=12% Similarity=0.086 Sum_probs=97.7
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.||+++. ++++++++.. ++-.+||.|+..+..-.=.....+=|...+.+| -+.++.+..+-. .+
T Consensus 38 d~DLt~~--a~t~~lF~~e-----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv-----~K 101 (315)
T KOG1431|consen 38 DADLTNL--ADTRALFESE-----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGV-----KK 101 (315)
T ss_pred cccccch--HHHHHHHhcc-----CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHHhch-----hh
Confidence 6899999 9999998864 678999998764321111122334444444443 455555554422 23
Q ss_pred EEEeeccccc--------------ccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--
Q 027744 95 IVFLTSIIGA--------------ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-- 158 (219)
Q Consensus 95 iv~iss~~~~--------------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-- 158 (219)
+++..|.+.+ ...+.+..-.|+-+|..+.-..+.++++++. ...++-|--+.+|...-..+
T Consensus 102 ~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~s 178 (315)
T KOG1431|consen 102 VVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENS 178 (315)
T ss_pred hhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccc
Confidence 4554444432 0112345567999998888888999998754 44555554444443221111
Q ss_pred ---hHHHHHHH-------------HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 159 ---QERAVKLV-------------REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 159 ---~~~~~~~~-------------~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
+..+.+.. ....|++.+.... |+|++++|++.+-.. =+.|++..|.
T Consensus 179 HVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~-DLA~l~i~vlr~Y~~---vEpiils~ge 240 (315)
T KOG1431|consen 179 HVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD-DLADLFIWVLREYEG---VEPIILSVGE 240 (315)
T ss_pred cchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh-HHHHHHHHHHHhhcC---ccceEeccCc
Confidence 11111111 1224566666666 999999999965322 2667776665
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0038 Score=54.59 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=52.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++..|+++++-.--....+.+. ..+|++||+|+.... .+.++..+++|+.++.++++.+...
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~---~~vDiVIH~AA~v~f--------~~~~~~a~~vNV~GT~nLLelA~~~--- 257 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIA---KEVDVIINSAANTTF--------DERYDVAIDINTRGPCHLMSFAKKC--- 257 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHH---hcCCEEEECcccccc--------ccCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 57999999999861000011222222 248999999997521 1346778999999999999887543
Q ss_pred cCCCCeEEEeecccc
Q 027744 89 SKAGGSIVFLTSIIG 103 (219)
Q Consensus 89 ~~~~g~iv~iss~~~ 103 (219)
+.-.++|++||...
T Consensus 258 -~~lk~fV~vSTayV 271 (605)
T PLN02503 258 -KKLKLFLQVSTAYV 271 (605)
T ss_pred -CCCCeEEEccCcee
Confidence 11256888888654
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.013 Score=48.55 Aligned_cols=154 Identities=15% Similarity=0.100 Sum_probs=84.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|+.|. ..++. ..++|++||+++.. .+ + ++.++..+++.
T Consensus 111 ~v~~v~~D~~d~-----~~~~~-----~~~~d~Vi~~~~~~----------~~-----------~----~~~ll~aa~~~ 155 (378)
T PLN00016 111 GVKTVWGDPADV-----KSKVA-----GAGFDVVYDNNGKD----------LD-----------E----VEPVADWAKSP 155 (378)
T ss_pred CceEEEecHHHH-----Hhhhc-----cCCccEEEeCCCCC----------HH-----------H----HHHHHHHHHHc
Confidence 367777777653 22221 13689999986531 11 1 22233444443
Q ss_pred CCCCeEEEeecccccccCCCCC------cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPG------AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~------~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
+ -.++|++||...+......+ ...+. +|...+.+.+ ..++.+..++|+.+.++............
T Consensus 156 g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~~~~~~~ 226 (378)
T PLN00016 156 G-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDCEEWFFD 226 (378)
T ss_pred C-CCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCchHHHHHH
Confidence 3 46899999986542110001 11122 7887776653 24789999999999987543211111111
Q ss_pred HHHHhhcC--C-------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 164 KLVREAAP--L-------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 164 ~~~~~~~~--~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... ...+ . ..+...+ |+|++++.++... ...|+++++.++..+.
T Consensus 227 ~~~-~~~~i~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~--~~~~~~yni~~~~~~s 279 (378)
T PLN00016 227 RLV-RGRPVPIPGSGIQLTQLGHVK-DLASMFALVVGNP--KAAGQIFNIVSDRAVT 279 (378)
T ss_pred HHH-cCCceeecCCCCeeeceecHH-HHHHHHHHHhcCc--cccCCEEEecCCCccC
Confidence 111 1111 1 1133444 9999999988542 3457999998886544
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.015 Score=51.78 Aligned_cols=149 Identities=16% Similarity=0.228 Sum_probs=86.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|+++. . +.+++ .++|++||+|+.. ... ...+|+.++.++++++. +
T Consensus 40 ~~ve~v~~Dl~d~--~-l~~al-------~~~D~VIHLAa~~-~~~------------~~~vNv~Gt~nLleAA~----~ 92 (699)
T PRK12320 40 PRVDYVCASLRNP--V-LQELA-------GEADAVIHLAPVD-TSA------------PGGVGITGLAHVANAAA----R 92 (699)
T ss_pred CCceEEEccCCCH--H-HHHHh-------cCCCEEEEcCccC-ccc------------hhhHHHHHHHHHHHHHH----H
Confidence 3578899999875 3 32222 3589999999863 211 12478888888888774 2
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
. +.++|++||..+. + ..|. ..+.+.+ ..++.+..++++.+.++....... .........
T Consensus 93 ~--GvRiV~~SS~~G~-~------~~~~----~aE~ll~-------~~~~p~~ILR~~nVYGp~~~~~~~-r~I~~~l~~ 151 (699)
T PRK12320 93 A--GARLLFVSQAAGR-P------ELYR----QAETLVS-------TGWAPSLVIRIAPPVGRQLDWMVC-RTVATLLRS 151 (699)
T ss_pred c--CCeEEEEECCCCC-C------cccc----HHHHHHH-------hcCCCEEEEeCceecCCCCcccHh-HHHHHHHHH
Confidence 2 3579999986432 1 1122 2233322 134778999999988874322111 112221111
Q ss_pred ---hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 169 ---AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ---~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..++. +...+ |++++++.+++.. .+| ++++.||..++
T Consensus 152 ~~~~~pI~-vIyVd-Dvv~alv~al~~~---~~G-iyNIG~~~~~S 191 (699)
T PRK12320 152 KVSARPIR-VLHLD-DLVRFLVLALNTD---RNG-VVDLATPDTTN 191 (699)
T ss_pred HHcCCceE-EEEHH-HHHHHHHHHHhCC---CCC-EEEEeCCCeeE
Confidence 11111 12444 9999998888542 235 99999997655
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.028 Score=44.43 Aligned_cols=158 Identities=11% Similarity=0.076 Sum_probs=83.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCC-CcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGN-LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+..+.+|+.|. +++..+++.. +...+ +|.++++++.. . . ..+ ..+.++..+++
T Consensus 40 ~~~~~~~d~~d~--~~l~~a~~~~-~~~~g~~d~v~~~~~~~-~-------~--~~~------------~~~~~i~aa~~ 94 (285)
T TIGR03649 40 NEKHVKFDWLDE--DTWDNPFSSD-DGMEPEISAVYLVAPPI-P-------D--LAP------------PMIKFIDFARS 94 (285)
T ss_pred CCccccccCCCH--HHHHHHHhcc-cCcCCceeEEEEeCCCC-C-------C--hhH------------HHHHHHHHHHH
Confidence 456778999999 8888877543 22345 89999987642 1 0 000 11233444555
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH--HHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV--KLV 166 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~--~~~ 166 (219)
.+ -.+||++||.... .+ .+ .+...+.+.+. ..|+....++|++....+........... ...
T Consensus 95 ~g-v~~~V~~Ss~~~~-~~-~~-------~~~~~~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~ 158 (285)
T TIGR03649 95 KG-VRRFVLLSASIIE-KG-GP-------AMGQVHAHLDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIY 158 (285)
T ss_pred cC-CCEEEEeeccccC-CC-Cc-------hHHHHHHHHHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEE
Confidence 44 4689999985443 21 11 12222222211 13899999999977654321110000000 000
Q ss_pred -HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 -REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 -~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........+.... |+|+++..++.... ..|+.+++.|+..++
T Consensus 159 ~~~g~~~~~~v~~~-Dva~~~~~~l~~~~--~~~~~~~l~g~~~~s 201 (285)
T TIGR03649 159 SATGDGKIPFVSAD-DIARVAYRALTDKV--APNTDYVVLGPELLT 201 (285)
T ss_pred ecCCCCccCcccHH-HHHHHHHHHhcCCC--cCCCeEEeeCCccCC
Confidence 0001111244555 99999999886532 236677777765544
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.078 Score=41.77 Aligned_cols=162 Identities=12% Similarity=0.044 Sum_probs=100.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
+++.++..|+.|+ ++++++++. -+++||..|.-.+.+. .+- .++|+.++-.+.+.+...
T Consensus 109 GQvl~~~fd~~De--dSIr~vvk~-------sNVVINLIGrd~eTkn---f~f------~Dvn~~~aerlAricke~--- 167 (391)
T KOG2865|consen 109 GQVLFMKFDLRDE--DSIRAVVKH-------SNVVINLIGRDYETKN---FSF------EDVNVHIAERLARICKEA--- 167 (391)
T ss_pred cceeeeccCCCCH--HHHHHHHHh-------CcEEEEeeccccccCC---ccc------ccccchHHHHHHHHHHhh---
Confidence 5899999999999 999999885 4899999986312222 221 345666666666655332
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ --++|.+|+..+. ....+-|=-+|++.+--++ .++. ...+|+|..+.+...+-...-.-++..+ .
T Consensus 168 -G-VerfIhvS~Lgan----v~s~Sr~LrsK~~gE~aVr---dafP----eAtIirPa~iyG~eDrfln~ya~~~rk~-~ 233 (391)
T KOG2865|consen 168 -G-VERFIHVSCLGAN----VKSPSRMLRSKAAGEEAVR---DAFP----EATIIRPADIYGTEDRFLNYYASFWRKF-G 233 (391)
T ss_pred -C-hhheeehhhcccc----ccChHHHHHhhhhhHHHHH---hhCC----cceeechhhhcccchhHHHHHHHHHHhc-C
Confidence 1 2479999987653 3445667788888876665 3443 3677888877755433221111111111 2
Q ss_pred hcCCCCCC--------CCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 169 AAPLHRWL--------DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 169 ~~~~~~~~--------~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
..|+...+ ..- |||++++..+-+. .-.|.++..-|--
T Consensus 234 ~~pL~~~GekT~K~PVyV~-DVaa~IvnAvkDp--~s~Gktye~vGP~ 278 (391)
T KOG2865|consen 234 FLPLIGKGEKTVKQPVYVV-DVAAAIVNAVKDP--DSMGKTYEFVGPD 278 (391)
T ss_pred ceeeecCCcceeeccEEEe-hHHHHHHHhccCc--cccCceeeecCCc
Confidence 23333222 233 9999999988654 4579888877654
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.12 Score=40.53 Aligned_cols=157 Identities=13% Similarity=0.149 Sum_probs=76.8
Q ss_pred CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcchh---
Q 027744 39 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY--- 115 (219)
Q Consensus 39 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y--- 115 (219)
++|++||.||.. -... ..+.+.=+..++ +-+..++.+.....+.+.+.++..=+|..++... . ....|
T Consensus 56 ~~DavINLAG~~-I~~r--rWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~-~-~~~~~tE~ 126 (297)
T COG1090 56 GIDAVINLAGEP-IAER--RWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGH-S-GDRVVTEE 126 (297)
T ss_pred CCCEEEECCCCc-cccc--cCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecC-C-CceeeecC
Confidence 699999999964 2111 133333334433 4455666666666654434444444444454221 1 11111
Q ss_pred -HHhHHHHHHHHHHHHHHh---CCCCeEEEEeecCCccCCCCccccchHHHHHHHH-hhcCCC----CCCCCchhHHHHH
Q 027744 116 -GACAASIHQLVRTAAMEI---GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR-EAAPLH----RWLDVKNDLASTV 186 (219)
Q Consensus 116 -~~sK~a~~~l~~~l~~e~---~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~dva~~~ 186 (219)
....-.+..+|+.+-.+. ...|+|+..++.|.|..+-......-....+... ...-.+ .+..- +|+.+.+
T Consensus 127 ~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhi-eD~v~~I 205 (297)
T COG1090 127 SPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHI-EDLVNAI 205 (297)
T ss_pred CCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeH-HHHHHHH
Confidence 112223444444443332 2358999999999998754332111000000000 000001 12233 5999999
Q ss_pred HHhccCCCCcccceEEEecCCc
Q 027744 187 IYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 187 ~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.|++.+ ..+.|- +|+.+-.
T Consensus 206 ~fll~~--~~lsGp-~N~taP~ 224 (297)
T COG1090 206 LFLLEN--EQLSGP-FNLTAPN 224 (297)
T ss_pred HHHHhC--cCCCCc-ccccCCC
Confidence 999965 344553 4544433
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.34 Score=38.24 Aligned_cols=100 Identities=12% Similarity=-0.009 Sum_probs=70.4
Q ss_pred CcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccc--------------
Q 027744 40 LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAE-------------- 105 (219)
Q Consensus 40 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~-------------- 105 (219)
+|-++|.|+..++..- ..- --+.+..|+.++.+.+..+.+. ++|++..|+...+-
T Consensus 92 vD~IyhLAapasp~~y-~~n----pvktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~e~ywg~ 160 (350)
T KOG1429|consen 92 VDQIYHLAAPASPPHY-KYN----PVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQVETYWGN 160 (350)
T ss_pred hhhhhhhccCCCCccc-ccC----ccceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCccccccc
Confidence 6889999887643221 111 1245788999999988877543 47899988877651
Q ss_pred cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 106 RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 106 ~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
..+..+.+.|.-.|.+.+.|+..+.++ .||.+.+.++--+.+|..
T Consensus 161 vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 161 VNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRM 205 (350)
T ss_pred cCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCcc
Confidence 112246678999999999999988877 478888777766666543
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.42 Score=35.15 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=66.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++++|++|. +++.++++.+.+.++++|++|+.+... ++-.+..++...-.
T Consensus 46 ~~~i~~~~~Dv~d~--~sv~~~i~~~l~~~g~id~lv~~vh~~-----------------------~~~~~~~~~~~~gv 100 (177)
T PRK08309 46 PESITPLPLDYHDD--DALKLAIKSTIEKNGPFDLAVAWIHSS-----------------------AKDALSVVCRELDG 100 (177)
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCeEEEEecccc-----------------------chhhHHHHHHHHcc
Confidence 35788899999999 999999999999999999999886643 22333334333322
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+.+ +-+++.|-...+. ++ +.........+....-|..|++...-..++..
T Consensus 101 ~~~-~~~~~h~~gs~~~-----~~---------------~~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt 150 (177)
T PRK08309 101 SSE-TYRLFHVLGSAAS-----DP---------------RIPSEKIGPARCSYRRVILGFVLEDTYSRWLT 150 (177)
T ss_pred CCC-CceEEEEeCCcCC-----ch---------------hhhhhhhhhcCCceEEEEEeEEEeCCccccCc
Confidence 222 3467776543332 10 11122233345677888889988766655543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.32 Score=42.38 Aligned_cols=193 Identities=14% Similarity=0.109 Sum_probs=112.3
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhC--------------CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhh
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILG--------------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 72 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 72 (219)
.+...-++++++++. .+++.+++.|-++-. .+|.++-.|++. ..+.+.+.+.. -+..+++-+
T Consensus 449 ~ga~LwvVpaN~~Sy--sDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~-v~G~l~~agsr-aE~~~rilL 524 (866)
T COG4982 449 YGAALWVVPANMGSY--SDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPR-VSGELADAGSR-AEFAMRILL 524 (866)
T ss_pred CCceEEEEeccccch--hhHHHHHHHhccccccccCCcceecccccCcceeeecccCC-ccCccccCCch-HHHHHHHHH
Confidence 466788999999998 999999999954321 366777777763 44555554432 233345555
Q ss_pred chHHHHHHHHHHHHHhcCC--CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC-CCCeEEEEeecCCcc
Q 027744 73 VAPWFLLKAVGRRMKESKA--GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLHL 149 (219)
Q Consensus 73 ~~~~~l~~~~~~~l~~~~~--~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~-~~gi~v~~i~pG~v~ 149 (219)
+....+.-.+.++-...+- +-++|.-.|.. ++.+.+-++|+-+|.+++.++--++.|-. ...+.+..-.-||++
T Consensus 525 w~V~Rliggl~~~~s~r~v~~R~hVVLPgSPN---rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtr 601 (866)
T COG4982 525 WNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPN---RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTR 601 (866)
T ss_pred HHHHHHHHHhhhhccccCcccceEEEecCCCC---CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence 5545554444433222111 23455555543 45578889999999999999988887742 123566666678887
Q ss_pred CCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcc---cceEEEecCCcccc
Q 027744 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM---TGTTIYVDGAQSIT 211 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~---~G~~i~~dgG~~~~ 211 (219)
....-.. +....+.. +..-.+. ..+ +|+|.-++-||+.+.... +=-...++||....
T Consensus 602 GTGLMg~--Ndiiv~ai-Ek~GV~t-yS~-~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~ 661 (866)
T COG4982 602 GTGLMGH--NDIIVAAI-EKAGVRT-YST-DEMAFNLLGLASAEVVELAASSPITADLTGGLGEV 661 (866)
T ss_pred cccccCC--cchhHHHH-HHhCcee-cCH-HHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence 6522111 11111111 2222222 233 488888888887643222 11345566877543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.038 Score=42.46 Aligned_cols=49 Identities=10% Similarity=0.159 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhch
Q 027744 25 AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVA 74 (219)
Q Consensus 25 ~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 74 (219)
+..++.+.+.+.++.+|++|||||+. ...+....+.++|..++++|-..
T Consensus 67 s~~~m~~~l~~~~~~~DivIh~AAvs-d~~~~~~~~~~~~~~~~~v~~~~ 115 (229)
T PRK06732 67 NVDDLLETLEPLVKDHDVLIHSMAVS-DYTPVYMTDLEEVSASDNLNEFL 115 (229)
T ss_pred cHHHHHHHHHHHhcCCCEEEeCCccC-Cceehhhhhhhhhhhhhhhhhhh
Confidence 33444555555667899999999986 55666777888999988876433
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.2 Score=42.37 Aligned_cols=124 Identities=11% Similarity=0.093 Sum_probs=78.9
Q ss_pred cceEEEEecCCccchhHHH-HHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFD-EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~-~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++..+..|+++++. .+. .-.+.+ ...+|++||+|+-... .+-++..+.+|.+|+..+++.+....+
T Consensus 79 ~Kv~pi~GDi~~~~L-Gis~~D~~~l---~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~~ 146 (467)
T KOG1221|consen 79 EKVVPIAGDISEPDL-GISESDLRTL---ADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMVK 146 (467)
T ss_pred ecceeccccccCccc-CCChHHHHHH---HhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhhh
Confidence 578889999988721 121 111112 2369999999997632 345677799999999999998876554
Q ss_pred hcCCCCeEEEeecccccc------cCCC--------------------------------CCcchhHHhHHHHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAE------RGLY--------------------------------PGAAAYGACAASIHQLVRTA 129 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~------~~~~--------------------------------~~~~~y~~sK~a~~~l~~~l 129 (219)
- ..++.+|+.-... ..++ .....|.-+|+-.+++...-
T Consensus 147 l----~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~ 222 (467)
T KOG1221|consen 147 L----KALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE 222 (467)
T ss_pred h----heEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh
Confidence 2 4577777754320 0000 11235777788777777654
Q ss_pred HHHhCCCCeEEEEeecCCccCCCC
Q 027744 130 AMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 130 ~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+. ++-+..++|+.|.+...
T Consensus 223 ~~-----~lPivIiRPsiI~st~~ 241 (467)
T KOG1221|consen 223 AE-----NLPLVIIRPSIITSTYK 241 (467)
T ss_pred cc-----CCCeEEEcCCceecccc
Confidence 43 46778888877665543
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.16 Score=38.93 Aligned_cols=170 Identities=18% Similarity=0.209 Sum_probs=94.4
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
++-.|+-|. +..++++-. .++|.+||-.+..+.. .........++|+.|..++++.+..+-.
T Consensus 91 yIy~DILD~--K~L~eIVVn-----~RIdWL~HfSALLSAv------GE~NVpLA~~VNI~GvHNil~vAa~~kL----- 152 (366)
T KOG2774|consen 91 YIYLDILDQ--KSLEEIVVN-----KRIDWLVHFSALLSAV------GETNVPLALQVNIRGVHNILQVAAKHKL----- 152 (366)
T ss_pred chhhhhhcc--ccHHHhhcc-----cccceeeeHHHHHHHh------cccCCceeeeecchhhhHHHHHHHHcCe-----
Confidence 556788887 776666532 4799999987654221 1222333478999999999998866532
Q ss_pred CeEEEeeccccccc-----CCC------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEee-cCCccCCCCccccchH
Q 027744 93 GSIVFLTSIIGAER-----GLY------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA-RGLHLQDEYPIAVGQE 160 (219)
Q Consensus 93 g~iv~iss~~~~~~-----~~~------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~-pG~v~t~~~~~~~~~~ 160 (219)
-+|+-|+-|... ++. .+...|+.||--.+.+-+.+...+ |+.+.+++ ||.+..+--.....+-
T Consensus 153 --~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdy 227 (366)
T KOG2774|consen 153 --KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDY 227 (366)
T ss_pred --eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchh
Confidence 244444333211 111 245679999999999888877765 56565554 5554432211111111
Q ss_pred H---HHHHHHh---hcCCC---C--CCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 161 R---AVKLVRE---AAPLH---R--WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 161 ~---~~~~~~~---~~~~~---~--~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
. +.+...+ ..+++ | .... +|+-.++..++...+..+.-.++++.|
T Consensus 228 a~A~f~~Al~~gk~tCylrpdtrlpmmy~-~dc~~~~~~~~~a~~~~lkrr~ynvt~ 283 (366)
T KOG2774|consen 228 AIAIFYDALQKGKHTCYLRPDTRLPMMYD-TDCMASVIQLLAADSQSLKRRTYNVTG 283 (366)
T ss_pred HHHHHHHHHHcCCcccccCCCccCceeeh-HHHHHHHHHHHhCCHHHhhhheeeece
Confidence 1 1111101 01111 1 1122 477777766665555566667777764
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.93 Score=46.58 Aligned_cols=118 Identities=16% Similarity=0.222 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccc
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~ 102 (219)
.++..+++.+....++++.+||..+.... ........ ....-...+...|.+.|.+.+.+...+ ++.++.++...
T Consensus 1813 ~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~ 1888 (2582)
T TIGR02813 1813 TSIEAVIKDIEEKTAQIDGFIHLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRID 1888 (2582)
T ss_pred HHHHHHHHhhhccccccceEEEeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecC
Confidence 67777888887777889999998775311 00111111 111112334446777777766655433 57888888876
Q ss_pred ccccCCCCCcch--------hHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 103 GAERGLYPGAAA--------YGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 103 ~~~~~~~~~~~~--------y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
|. .+ +..... -...++++.+|+|++++||..-.+|...+.|..
T Consensus 1889 G~-~g-~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813 1889 GG-FG-YSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred Cc-cc-cCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence 54 22 111111 134688999999999999988778888887753
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.07 E-value=0.31 Score=45.76 Aligned_cols=114 Identities=15% Similarity=0.193 Sum_probs=91.2
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
-|.++.+-..|++.. +..+.++++.. +++.+-+++|.|.+. ..+-+++.+++.|+..-+-...++.++-+.-..+.
T Consensus 1819 ~GVqV~vsT~nitt~--~ga~~Li~~s~-kl~~vGGiFnLA~VL-RD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C 1894 (2376)
T KOG1202|consen 1819 RGVQVQVSTSNITTA--EGARGLIEESN-KLGPVGGIFNLAAVL-RDGLIENQTPKNFKDVAKPKYSGTINLDRVSREIC 1894 (2376)
T ss_pred cCeEEEEecccchhh--hhHHHHHHHhh-hcccccchhhHHHHH-HhhhhcccChhHHHhhhccceeeeeehhhhhhhhC
Confidence 466788888899988 88888888764 457899999999987 77899999999999999999999999887766654
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA 129 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l 129 (219)
-. -.-+|..||..-- +| ..++..|+-+..+.+-++..-
T Consensus 1895 ~~---LdyFv~FSSvscG-RG-N~GQtNYG~aNS~MERiceqR 1932 (2376)
T KOG1202|consen 1895 PE---LDYFVVFSSVSCG-RG-NAGQTNYGLANSAMERICEQR 1932 (2376)
T ss_pred cc---cceEEEEEeeccc-CC-CCcccccchhhHHHHHHHHHh
Confidence 32 2356666665533 45 688899999999999999863
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=87.51 E-value=4.7 Score=32.75 Aligned_cols=89 Identities=16% Similarity=0.106 Sum_probs=54.7
Q ss_pred HHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccccc----------
Q 027744 35 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA---------- 104 (219)
Q Consensus 35 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~---------- 104 (219)
+.+...|++|+.||.... + . ..++..+..|... ++.+.+.+.+.. ...+++++|-...
T Consensus 82 ~~l~~aDiVVitAG~~~~--~--g---~~R~dll~~N~~i----~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~ 149 (323)
T PLN00106 82 DALKGADLVIIPAGVPRK--P--G---MTRDDLFNINAGI----VKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVL 149 (323)
T ss_pred HHcCCCCEEEEeCCCCCC--C--C---CCHHHHHHHHHHH----HHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHH
Confidence 334579999999998422 1 1 2356667777655 444555555544 3345555554442
Q ss_pred -ccCCCCCcchhHHhHHHHHHHHHHHHHHhCC
Q 027744 105 -ERGLYPGAAAYGACAASIHQLVRTAAMEIGK 135 (219)
Q Consensus 105 -~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~ 135 (219)
....+++...|+.++.-...|-..+++++.-
T Consensus 150 ~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv 181 (323)
T PLN00106 150 KKAGVYDPKKLFGVTTLDVVRANTFVAEKKGL 181 (323)
T ss_pred HHcCCCCcceEEEEecchHHHHHHHHHHHhCC
Confidence 1122566778898886666788888888753
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=84.55 E-value=1.8 Score=36.29 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=26.4
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD 55 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~ 55 (219)
+..+|+++. +++.+.+. +.++++|++|||||+. ...+
T Consensus 246 ~~~~dv~~~--~~~~~~v~---~~~~~~DilI~~Aav~-d~~~ 282 (399)
T PRK05579 246 VKRIDVESA--QEMLDAVL---AALPQADIFIMAAAVA-DYRP 282 (399)
T ss_pred cEEEccCCH--HHHHHHHH---HhcCCCCEEEEccccc-cccc
Confidence 346788887 66555544 5678999999999985 4333
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=83.72 E-value=15 Score=27.89 Aligned_cols=157 Identities=19% Similarity=0.161 Sum_probs=77.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|..|. +++.++++ ++|.++++.+... ..+.+ ....+++++.. .
T Consensus 44 g~~vv~~d~~~~--~~l~~al~-------g~d~v~~~~~~~~---------~~~~~--------~~~~li~Aa~~----a 93 (233)
T PF05368_consen 44 GAEVVEADYDDP--ESLVAALK-------GVDAVFSVTPPSH---------PSELE--------QQKNLIDAAKA----A 93 (233)
T ss_dssp TTEEEES-TT-H--HHHHHHHT-------TCSEEEEESSCSC---------CCHHH--------HHHHHHHHHHH----H
T ss_pred cceEeecccCCH--HHHHHHHc-------CCceEEeecCcch---------hhhhh--------hhhhHHHhhhc----c
Confidence 356789999988 77666654 6899999877541 11111 12233444433 2
Q ss_pred CCCCeEEEeecccccccCC--CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH--
Q 027744 90 KAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL-- 165 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~--~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~-- 165 (219)
+ =.++|+ ||........ ..+...+-..|..++...+. .++..+.|+||+..................
T Consensus 94 g-Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~ 164 (233)
T PF05368_consen 94 G-VKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKD 164 (233)
T ss_dssp T--SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSS
T ss_pred c-cceEEE-EEecccccccccccccchhhhhhhhhhhhhhh-------ccccceeccccchhhhhhhhhcccccccccce
Confidence 2 256775 4443321110 11122233456666544443 389999999987443221110000000000
Q ss_pred -HHhhcCCC---CCC-CCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 166 -VREAAPLH---RWL-DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 166 -~~~~~~~~---~~~-~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
..-..+.. .+. +. +|+|+.+..++.+...+-+|..+.+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~-~Dvg~~va~il~~p~~~~~~~~~~~~~ 209 (233)
T PF05368_consen 165 VVTLPGPGNQKAVPVTDT-RDVGRAVAAILLDPEKHNNGKTIFLAG 209 (233)
T ss_dssp EEEEETTSTSEEEEEEHH-HHHHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred EEEEccCCCccccccccH-HHHHHHHHHHHcChHHhcCCEEEEeCC
Confidence 00000111 111 33 599999999998755444788888765
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.61 E-value=1.6 Score=33.86 Aligned_cols=171 Identities=11% Similarity=-0.004 Sum_probs=98.2
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.++....+-.|++|. ....++++.+ .++-+.|.|+-.+.. .+.+--+..-++...|++.++.++...-
T Consensus 81 ~~~~mkLHYgDmTDs--s~L~k~I~~i-----kPtEiYnLaAQSHVk-----vSFdlpeYTAeVdavGtLRlLdAi~~c~ 148 (376)
T KOG1372|consen 81 NGASMKLHYGDMTDS--SCLIKLISTI-----KPTEVYNLAAQSHVK-----VSFDLPEYTAEVDAVGTLRLLDAIRACR 148 (376)
T ss_pred ccceeEEeeccccch--HHHHHHHhcc-----CchhhhhhhhhcceE-----EEeecccceeeccchhhhhHHHHHHhcC
Confidence 356788899999999 8888888877 467778887754221 1122223445677889999988876653
Q ss_pred HhcCCCCeEEEeeccccc---------ccCCCCCcchhHHhHHHHHHHHHHHHHHh---CCCCeEEEEeecCCccCCCCc
Q 027744 87 KESKAGGSIVFLTSIIGA---------ERGLYPGAAAYGACAASIHQLVRTAAMEI---GKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~---------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~---~~~gi~v~~i~pG~v~t~~~~ 154 (219)
... +-++-..|+..-+ +..|+-+.+.|+++|-+....+-.++..+ +-.||-+|.-.|.-=.+=..+
T Consensus 149 l~~--~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTR 226 (376)
T KOG1372|consen 149 LTE--KVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTR 226 (376)
T ss_pred ccc--ceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhH
Confidence 332 1233333332211 23345678899999998777666555554 346777777766421111111
Q ss_pred cccchHHHHHHH--------HhhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 155 IAVGQERAVKLV--------REAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 155 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.... ....... .+...++.++... |-.++++.++.++
T Consensus 227 KItR-svakI~~gqqe~~~LGNL~a~RDWGhA~-dYVEAMW~mLQ~d 271 (376)
T KOG1372|consen 227 KITR-SVAKISLGQQEKIELGNLSALRDWGHAG-DYVEAMWLMLQQD 271 (376)
T ss_pred HHHH-HHHHhhhcceeeEEecchhhhcccchhH-HHHHHHHHHHhcC
Confidence 1100 0000000 0112344566666 7888887777654
|
|
| >PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=81.41 E-value=22 Score=27.24 Aligned_cols=140 Identities=11% Similarity=0.061 Sum_probs=75.1
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCC------------C-------------------
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ------------D------------------- 55 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~------------~------------------- 55 (219)
.|-....+-.|.-+. +--+++++.|++.+|.+|.||++-+-..... +
T Consensus 21 ~Gl~a~~ingDAFS~--e~K~~vI~~Ik~~~G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~~~~~~~~ 98 (237)
T PF12241_consen 21 AGLYAKSINGDAFSD--EMKEQVIELIKEDFGKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDTETDEVSE 98 (237)
T ss_dssp TT--EEEEES-TTSH--HHHHHHHHHHHHHTS-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEETTTTEEEE
T ss_pred CCCeeeecccccCCH--HHHHHHHHHHHHhcCCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeecCCCeEEE
Confidence 355677888999988 8889999999999999999998744211100 1
Q ss_pred --CCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh---cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHH
Q 027744 56 --PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE---SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 130 (219)
Q Consensus 56 --~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~ 130 (219)
++..+.++++..+.+ .|---+-...-.+... .+ +.+-|-.|-+.....-+.-..+.-+.+|.=++.-+..+.
T Consensus 99 ~tiepAt~eEi~~TvkV--MGGEDWe~Wi~aL~~AgvLA~-g~kTvAySYIG~~~T~pIY~~GTiG~AK~dLe~ta~~i~ 175 (237)
T PF12241_consen 99 VTIEPATEEEIENTVKV--MGGEDWELWIDALKEAGVLAE-GFKTVAYSYIGPELTWPIYRDGTIGKAKEDLEKTAHAIN 175 (237)
T ss_dssp EEE----HHHHHHHHHH--HSSHHHHHHHHHHHHCT-EEE-EEEEEEEEE---GGGCCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHhhccc--cCchHHHHHHHHHHHCCCccC-CCEEEEEeccCcccChhhhcCCcHHHHHHHHHHHHHHHH
Confidence 123356666666554 3443333333222221 11 233333333332222223455778999999999999999
Q ss_pred HHhCCCCeEEE-EeecCCccCCC
Q 027744 131 MEIGKHKIRVN-GIARGLHLQDE 152 (219)
Q Consensus 131 ~e~~~~gi~v~-~i~pG~v~t~~ 152 (219)
..+++.|.+.. +++... .|..
T Consensus 176 ~~L~~~~G~A~vsV~KAl-VTqA 197 (237)
T PF12241_consen 176 EKLAAIGGKAYVSVNKAL-VTQA 197 (237)
T ss_dssp HHHHTTT-EEEEEEE------TT
T ss_pred HHHHhcCCcEEEEEehhh-hhhh
Confidence 99988666554 555544 4443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 219 | ||||
| 1p33_A | 289 | Pteridine Reductase From Leishmania Tarentolae Comp | 7e-14 | ||
| 2xox_A | 288 | Crystal Structure Of Pteridine Reductase (Ptr1) Fro | 1e-12 | ||
| 3jq7_A | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 1e-11 | ||
| 3bmc_B | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 1e-11 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 1e-11 | ||
| 3jq7_B | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 1e-11 | ||
| 3bmc_A | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 1e-11 | ||
| 2wd7_B | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 1e-11 | ||
| 2c7v_A | 268 | Structure Of Trypanosoma Brucei Pteridine Reductase | 1e-11 | ||
| 2wd7_A | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 1e-11 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 2e-11 | ||
| 2qhx_A | 328 | Structure Of Pteridine Reductase From Leishmania Ma | 2e-11 | ||
| 1e92_A | 288 | Pteridine Reductase 1 From Leishmania Major Complex | 2e-11 | ||
| 1w0c_A | 307 | Inhibition Of Leishmania Major Pteridine Reductase | 2e-11 | ||
| 1e7w_A | 291 | One Active Site, Two Modes Of Reduction Correlate T | 2e-11 | ||
| 3svt_A | 281 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 3e-11 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-11 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 5e-11 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 6e-11 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 1e-10 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 4e-10 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 4e-10 | ||
| 1mxh_A | 276 | Crystal Structure Of Substrate Complex Of Putative | 7e-10 | ||
| 1mxf_A | 276 | Crystal Structure Of Inhibitor Complex Of Putative | 7e-10 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 1e-09 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 1e-09 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 3e-09 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 1e-08 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 2e-08 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 2e-08 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 3e-08 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 4e-08 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 4e-08 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 4e-08 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 5e-08 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 5e-08 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 5e-08 | ||
| 3ojf_A | 257 | Crystal Structure Of The Bacillus Cereus Enoyl-Acyl | 5e-08 | ||
| 2qio_A | 256 | X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc | 6e-08 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 1e-07 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 1e-07 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 1e-07 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 1e-07 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 1e-07 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 1e-07 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 2e-07 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 2e-07 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 2e-07 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 3e-07 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 3e-07 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 4e-07 | ||
| 3oif_A | 266 | Crystal Structure Of Enoyl-Acp Reductases I (Fabi) | 4e-07 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 5e-07 | ||
| 2o2s_A | 315 | The Structure Of T. Gondii Enoyl Acyl Carrier Prote | 5e-07 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 5e-07 | ||
| 4e4y_A | 244 | The Crystal Structure Of A Short Chain Dehydrogenas | 6e-07 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 7e-07 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 9e-07 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 9e-07 | ||
| 4eit_A | 276 | Crystal Structure Of An Enoyl-(Acyl Carrier Protein | 2e-06 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 2e-06 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 3e-06 | ||
| 2o50_A | 315 | The Crystal Structure Of Toxoplasma Gondii Enoyl Ac | 3e-06 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 4e-06 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 4e-06 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 5e-06 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 5e-06 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 5e-06 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 5e-06 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 6e-06 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 7e-06 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 7e-06 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 8e-06 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 9e-06 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 9e-06 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 1e-05 | ||
| 3grk_A | 293 | Crystal Structure Of Short Chain Dehydrogenase Redu | 1e-05 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 1e-05 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-05 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-05 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-05 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 2e-05 | ||
| 4ixt_A | 254 | Structure Of A 37-fold Mutant Of Halohydrin Dehalog | 3e-05 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 3e-05 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 3e-05 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 3e-05 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 3e-05 | ||
| 1pwx_A | 254 | Crystal Structure Of The Haloalcohol Dehalogenase H | 4e-05 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 5e-05 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 5e-05 | ||
| 4fs3_A | 256 | Crystal Structure Of Staphylococcus Aureus Enoyl-Ac | 5e-05 | ||
| 3k2e_A | 296 | Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R | 5e-05 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 6e-05 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 6e-05 | ||
| 2jjy_A | 268 | Crystal Structure Of Francisella Tularensis Enoyl R | 6e-05 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 7e-05 | ||
| 4ali_A | 282 | Crystal Structure Of S. Aureus Fabi In Complex With | 7e-05 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 7e-05 | ||
| 3nrc_A | 280 | Crystal Stucture Of The Francisella Tularensis Enoy | 7e-05 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-05 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 8e-05 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 9e-05 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 9e-05 | ||
| 4all_A | 277 | Crystal Structure Of S. Aureus Fabi In Complex With | 9e-05 | ||
| 3gnt_A | 256 | Crystal Structure Of The Staphylococcus Aureus Enoy | 9e-05 | ||
| 3gns_A | 260 | Crystal Structure Of The Staphylococcus Aureus Enoy | 1e-04 | ||
| 2p91_A | 285 | Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R | 1e-04 | ||
| 2ptg_A | 319 | Crystal Structure Of Eimeria Tenella Enoyl Reductas | 1e-04 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 1e-04 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-04 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 2e-04 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 2e-04 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 2e-04 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-04 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 3e-04 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 3e-04 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-04 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-04 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 4e-04 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 4e-04 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 5e-04 | ||
| 1ulu_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 9e-04 |
| >pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289 | Back alignment and structure |
|
| >pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288 | Back alignment and structure |
|
| >pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268 | Back alignment and structure |
|
| >pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328 | Back alignment and structure |
|
| >pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288 | Back alignment and structure |
|
| >pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307 | Back alignment and structure |
|
| >pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291 | Back alignment and structure |
|
| >pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257 | Back alignment and structure |
|
| >pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256 | Back alignment and structure |
|
| >pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl Reductase (Ftfabi) With Bound Nad Length = 268 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl Carrier Protein Reductase (Fabi) In Complex With Nad+ And Triclosan Length = 280 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277 | Back alignment and structure |
|
| >pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256 | Back alignment and structure |
|
| >pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260 | Back alignment and structure |
|
| >pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285 | Back alignment and structure |
|
| >pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-33
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 5/214 (2%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKK 66
G + + E AVD G L VHC + QV + +++
Sbjct: 59 GANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRR 118
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 126
V +N ++LK R M GGS V ++SI AYG +++ L+
Sbjct: 119 TVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAA-SNTH-RWFGAYGVTKSAVDHLM 175
Query: 127 RTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 186
+ AA E+G +RVN I GL D PL R +V+ D+A+
Sbjct: 176 QLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE-DVANMA 234
Query: 187 IYLISDGSRYMTGTTIYVDGAQSITR-PRMRSYM 219
++L+SD + ++TG I VDG Q + R P + +
Sbjct: 235 MFLLSDAASFVTGQVINVDGGQMLRRGPDFSAML 268
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 3e-33
Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 18/167 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ +K + I F+ +G+++ +++ G + + +T+I E G + A
Sbjct: 125 PNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA-ETGS-GFVVPSASAKA 182
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPL 172
+ + ++ A E GK+ +R N I G PI K + P
Sbjct: 183 GVEAMSKSLAAEWGKYGMRFNVIQPG-------PIKTKGAFSRLDPTGTFEKEMIGRIPC 235
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 219
R V+ +LA+ +L SD + ++ G I DG + + + +
Sbjct: 236 GRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDL 281
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 4e-33
Identities = 43/181 (23%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85
EA ++A +G +D V+ +Q L+V ++ F + ++N A + + V R
Sbjct: 65 EATERALGSVGPVDLLVNN---AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
+ G+IV ++S +R + + Y + ++ L + A+E+G HKIRVN +
Sbjct: 122 LIARGVPGAIVNVSSQCS-QRAV-TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
+ + K + PL ++ +V+ + + +++L+SD S TG+T+ V+
Sbjct: 180 TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSGMTTGSTLPVE 238
Query: 206 G 206
G
Sbjct: 239 G 239
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 5e-33
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
KG + VE D+ +R+ + + G L+ V+ + +D
Sbjct: 56 KGFK-VEASVCDLSSRSERQELMNTVANH---FHGKLNILVNNAGIVIYKEAKD---YTV 108
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+++ ++ INF A + L +K S+ G++VF++S+ G + P A YGA +
Sbjct: 109 EDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSG-ALAV-PYEAVYGATKGA 165
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+ QL R A E K IRVNG+ G+ L + Q+ + + + L R +
Sbjct: 166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEP 225
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
K +LA+ V +L + Y+TG IYVDG
Sbjct: 226 K-ELAAMVAFLCFPAASYVTGQIIYVDG 252
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 6e-33
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
KG VE D+ +R+ G L+ V+ + +D E
Sbjct: 68 KGLN-VEGSVCDLLSRTERDKLMQTVAHV---FDGKLNILVNNAGVVIHKEAKD---FTE 120
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
++ ++ NF A + L + +K S+ G+++FL+SI G L P + Y A +
Sbjct: 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAG-FSAL-PSVSLYSASKGA 177
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHR 174
I+Q+ ++ A E K IRVN +A G+ + P Q+ + P+ R
Sbjct: 178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNP---HQKEEIDNFIVKTPMGR 234
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++++ + +L + Y+TG I+ DG
Sbjct: 235 AGKPQ-EVSALIAFLCFPAASYITGQIIWADG 265
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-32
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85
+A +KA +G +D V+ MQ L+V ++ F + +N + + + + V R
Sbjct: 65 DATEKALGGIGPVDLLVNN---AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD 121
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
M GSIV ++S++ P Y + ++ L + AME+G HKIRVN +
Sbjct: 122 MINRGVPGSIVNVSSMVA-HVTF-PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 179
Query: 146 GLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
+ L D + ++E PL ++ +V+ D+ +++++L+SD S +G I VD
Sbjct: 180 TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSASTSGGGILVD 238
Query: 206 G 206
Sbjct: 239 A 239
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 5e-32
Identities = 49/208 (23%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G + D+ + G D+ + LG +D V M D +
Sbjct: 78 GVGGKALPIRCDVTQPDQVRGMLDQMTGE----LGGIDIAVCNAGIVSVQAMLD---MPL 130
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+EF+++ N + +A R M + GG+I+ S+ G + + Y A+
Sbjct: 131 EEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAA 190
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY---PIAVGQERAVKLVREAAPLHRWLDV 178
+ L + A+E+ H+IRVN ++ G Y + L PL R
Sbjct: 191 VVHLTKAMAVELAPHQIRVNSVSPG------YIRTELVEPLADYHALWEPKIPLGRMGRP 244
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ +L +YL S S YMTG+ I +DG
Sbjct: 245 E-ELTGLYLYLASAASSYMTGSDIVIDG 271
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 6e-31
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++F + N + + L + +K S G+I+F++SI G + Y A
Sbjct: 113 AEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAG-VVSA-SVGSIYSATKG 169
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHR 174
+++QL R A E IR N +A + I AV + K+V PL R
Sbjct: 170 ALNQLARNLACEWASDGIRANAVAPAV-------IATPLAEAVYDDEFKKVVISRKPLGR 222
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + + +++S V +L + Y+TG TI VDG
Sbjct: 223 FGEPE-EVSSLVAFLCMPAASYITGQTICVDG 253
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 112 bits (284), Expect = 6e-31
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 24/208 (11%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFK 65
G V D+ + E A + A K ++D ++ G + +++ + ++
Sbjct: 57 GYDAHGVAFDVTD--ELAIEAAFSKLDAEGIHVDILINN---AGIQYRKPMVELELENWQ 111
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K++ N + + + ++ +RM +GG I+ + S+ + P A Y A I L
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS-QAAR-PTVAPYTAAKGGIKML 169
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEY-------PIAVGQERAVKLVREAAPLHRWLDV 178
+ A E + I+ N I G Y + ++ V+ + P RW
Sbjct: 170 TCSMAAEWAQFNIQTNAIGPG------YILTDMNTALIEDKQFD-SWVKSSTPSQRWGRP 222
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ +L T I+L S S Y+ G IYVDG
Sbjct: 223 E-ELIGTAIFLSSKASDYINGQIIYVDG 249
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 6e-31
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDE 63
+ G V V +D+ A E +A + G LD V+ G Q +
Sbjct: 67 QFGTDVHTVAIDLA--EPDAPAELARRAAEAFGGLDVLVNN---AGISHPQPVVDTDPQL 121
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F + +N AP L AVG+ M + GG+I+ + S L P AY A +
Sbjct: 122 FDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA-LAPL-PDHYAYCTSKAGLV 179
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
+ A E+G H IR N + + L + G E + PL R+ +++
Sbjct: 180 MATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPH-EVS 238
Query: 184 STVIYLISDGSRYMTGTTIYVDG 206
V++L SD + + G I VDG
Sbjct: 239 DAVVWLASDAASMINGVDIPVDG 261
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 9e-31
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ FK ++ I+ + + + + + GG IV +T+ +G RG G+ A
Sbjct: 126 FNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLG-NRGQ-ALQVHAGSAKA 182
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPL 172
++ + R A+E G IRVN +A G PI+ G + ++ A+PL
Sbjct: 183 AVDAMTRHLAVEWGPQNIRVNSLAPG-------PISGTEGLRRLGGPQASLSTKVTASPL 235
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
R + ++A +V+YL S + Y+TG + DG +T P
Sbjct: 236 QRLGNKT-EIAHSVLYLASPLASYVTGAVLVADGGAWLTFP 275
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-30
Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 14/194 (7%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
+ VD+ + G +D ++ M+ + + +++ L++
Sbjct: 71 DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQG 130
Query: 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141
++ES G++V + S++ AY +++ + +T A E+G+ IRVN
Sbjct: 131 FTPALEES--KGAVVNVNSMVV-RHS-QAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 142 GIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
+ + E + L R ++AS ++++ SD
Sbjct: 187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTED-EVASAILFMASD 245
Query: 193 GSRYMTGTTIYVDG 206
+ +TG + V+
Sbjct: 246 LASGITGQALDVNC 259
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 3e-30
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 8/205 (3%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G V V +D+ E + A ++ G +D V C + + ++
Sbjct: 61 GHDVSSVVMDVTNTESVQNAVRSVHEQ----EGRVDILVACAGICISEVKAEDMTDGQWL 116
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K V IN + +AVGR M E K G IV + S+ G AAY A A +HQ
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQY 175
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
+R+ A E H IR N +A + + P+ R ++AS
Sbjct: 176 IRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPD-EVASV 234
Query: 186 VIYLISDGSRYMTGTTIYVDGAQSI 210
V +L SD + MTG + VD ++
Sbjct: 235 VQFLASDAASLMTGAIVNVDAGFTV 259
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 7e-30
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGE 61
K G D+ E+ + + +K G LD V+ G + +
Sbjct: 68 KYGVETMAFRCDVSNYEEVKKLLEAVKEK----FGKLDTVVNA---AGINRRHPAEEFPL 120
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
DEF++++++N +++ + ++ES SI+ + S+ E + P +AY A
Sbjct: 121 DEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM-PNISAYAASKGG 178
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-------PIAVGQERAVKLVREAAPLHR 174
+ L + A E G++ IRVN IA G + + E+ + + PL R
Sbjct: 179 VASLTKALAKEWGRYGIRVNVIAPG------WYRTKMTEAVFSDPEKL-DYMLKRIPLGR 231
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ DL ++L S+ ++Y+TG I+VDG
Sbjct: 232 TGVPE-DLKGVAVFLASEEAKYVTGQIIFVDG 262
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-29
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 9/202 (4%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E E + AV + G LD + G M + + + +++ + N + +
Sbjct: 69 EALHEALVELAVRR----FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
K + GGS+ F +S +G G G A Y A A + LV+ A+E+G I
Sbjct: 125 AKYQVPAIAALG-GGSLTFTSSFVGHTAGF-AGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 139 RVNGIARGLHLQD--EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
RVN + G + V L R + ++A +YL SDG+ +
Sbjct: 183 RVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPE-EIAEAALYLASDGASF 241
Query: 197 MTGTTIYVDGAQSITRPRMRSY 218
+TG + DG S+T+ Y
Sbjct: 242 VTGAALLADGGASVTKAAENLY 263
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-29
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 8/188 (4%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
EDRE AV+ G +D V + + E+ + K++ +N A +
Sbjct: 75 AEDRERLVAMAVNL----HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLM 130
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
KAV M++ GGS++ ++S+ +P Y ++ L + A+E+ I
Sbjct: 131 TKAVVPEMEKRG-GGSVLIVSSVGA-YHP-FPNLGPYNVSKTALLGLTKNLAVELAPRNI 187
Query: 139 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
RVN +A GL + + + + ++E+ + R + + D A V +L S+ + Y+T
Sbjct: 188 RVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPE-DCAGIVSFLCSEDASYIT 246
Query: 199 GTTIYVDG 206
G T+ V G
Sbjct: 247 GETVVVGG 254
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 2e-29
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E A + V K G+LD V G + E+ + + +N +
Sbjct: 89 ELQMRNAVRDLVLK----FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
L +K+ GG+IV ++SI G PGA AY A A+ +V+ A+E+GKH I
Sbjct: 145 LHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 139 RVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
RVN + G + + + + + + D+A + +L+S
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSE-DVAELIRFLVS 262
Query: 192 DGSRYMTGTTIYVDGAQSITR 212
+ +R++TG+ +++DG Q + R
Sbjct: 263 ERARHVTGSPVWIDGGQGLLR 283
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 107 bits (271), Expect = 6e-29
Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 17/191 (8%)
Query: 27 DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
D A+ + G LD V+ + +++ + ++KL IN F L+A R
Sbjct: 70 DAAIAATVEHAGGLDILVNNAALF---DLAPIVEITRESYEKLFAINVAGTLFTLQAAAR 126
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+M GG I+ + S G RG A Y A A++ L ++A +++ KH+I VN IA
Sbjct: 127 QMIAQGRGGKIINMASQAG-RRG-EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIA 184
Query: 145 ---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 195
G+ + +LV EA P R + DL I+L S S
Sbjct: 185 PGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAE-DLTGMAIFLASAESD 243
Query: 196 YMTGTTIYVDG 206
Y+ T VDG
Sbjct: 244 YIVSQTYNVDG 254
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-29
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
+ ++ + D+ ++D D + + D +G + D +
Sbjct: 41 FSAENLKFIKADLTKQQDITNVLDIIKN------VSFDGIFLNAGILIKGSIFD---IDI 91
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ KK++ +N + + +K + +K G SIVF S P + AY +
Sbjct: 92 ESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQC-FIAK-PNSFAYTLSKGA 146
Query: 122 IHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPL 172
I Q+ ++ A+++ K++IRVN + R L + + + + A K + PL
Sbjct: 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL 206
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+R + ++A VI+L+SD S++MTG I +DG
Sbjct: 207 NRIAQPQ-EIAELVIFLLSDKSKFMTGGLIPIDG 239
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-28
Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 25/197 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPW 76
++D +G A++ LG L VH + L++ +E+++++ ++ +
Sbjct: 54 KDDPKGLVKRALEA----LGGLHVLVHA---AAVNVRKPALELSYEEWRRVLYLHLDVAF 106
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
L +A M E+ G ++F+ S+ G AY ++ L R A E +
Sbjct: 107 LLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL 165
Query: 137 KIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
IRVN + G + + + P+ RW + ++A L
Sbjct: 166 GIRVNLLCPG-------YVETEFTLPLRQNPELYEPITARIPMGRWARPE-EIARVAAVL 217
Query: 190 ISDGSRYMTGTTIYVDG 206
D + Y+TG + VDG
Sbjct: 218 CGDEAEYLTGQAVAVDG 234
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-28
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 11/201 (5%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWF 77
+ED D + K G LD + + G ++FK+++ IN +
Sbjct: 76 DEDVRNLVDTTIAK----HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 78 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 137
+ K R M +K GSIVF SI + Y A ++ L + E+G++
Sbjct: 132 VAKHAARVMIPAK-KGSIVFTASISSF-TAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 138 IRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
IRVN ++ + L + + A L + D+A V YL D S
Sbjct: 190 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE-DVADAVAYLAGDES 248
Query: 195 RYMTGTTIYVDGAQSITRPRM 215
+Y++G + +DG + T P
Sbjct: 249 KYVSGLNLVIDGGYTRTNPAF 269
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 1e-28
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
E A VD + G +D + Y+G D+F +++ IN + +LKA
Sbjct: 67 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 126
Query: 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141
V R+M G IV S+ G +G P AAYG +I L TAA+++ + IRVN
Sbjct: 127 VSRQMITQN-YGRIVNTASMAG-VKGP-PNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183
Query: 142 GIA--------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
I+ + + + + + P+ R+ D+ ++ V
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN-EIPGVVA 242
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L+ D S +MTG + + G
Sbjct: 243 FLLGDDSSFMTGVNLPIAG 261
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 4e-28
Identities = 40/210 (19%), Positives = 78/210 (37%), Gaps = 25/210 (11%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ G+ + LD+ + + LD +H G + + ++
Sbjct: 59 ETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQ 118
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
++++N A + L +A+ + +S GS+VF +S +G +G AY A + +
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVG-RQGR-ANWGAYAASKFATEGM 175
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN----- 180
++ A E + ++RVN I G + A P D +
Sbjct: 176 MQVLADEYQQ-RLRVNCINPG-------GT------RTAMRASAFPTE---DPQKLKTPA 218
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
D+ ++L+ D SR TG T +
Sbjct: 219 DIMPLYLWLMGDDSRRKTGMTFDAQPGRKP 248
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-28
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
GQ + V +D+ +D + ++ +K G +D ++ + +D +
Sbjct: 53 FPGQ-ILTVQMDVRNTDDIQKMIEQIDEK----FGRIDILINNAAGNFICPAED---LSV 104
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ + ++ I ++ +A+G+ E G+I+ + + PG A A
Sbjct: 105 NGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYA-WDA-GPGVIHSAAAKAG 162
Query: 122 IHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIA--------VGQERAVKLVREAAPL 172
+ + +T A+E G K+ IRVN IA G PI E K ++ PL
Sbjct: 163 VLAMTKTLAVEWGRKYGIRVNAIAPG-------PIERTGGADKLWISEEMAKRTIQSVPL 215
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
R + ++A YL SD + Y+ GT + +DG Q + +
Sbjct: 216 GRLGTPE-EIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQY 255
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-28
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDE 63
Q VGLD+ + + + A DEA +K LG D V+ G +++ L+V E++
Sbjct: 52 DQKAVFVGLDVTDKANFDSAIDEAAEK----LGGFDVLVNN---AGIAQIKPLLEVTEED 104
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
K++ +N + +F ++A R+ E G I+ SI +G +P +AY ++
Sbjct: 105 LKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAA-IQG-FPILSAYSTTKFAVR 162
Query: 124 QLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHR 174
L + AA E+ VN A + + K + L R
Sbjct: 163 GLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR 222
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
V D+A V +L S+ S Y+TG + VDG
Sbjct: 223 -PSVPEDVAGLVSFLASENSNYVTGQVMLVDG 253
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 7e-28
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 55 DPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA 114
D L+ + +++++ +N ++ +A GR M G+IV L S+ G A++
Sbjct: 100 DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASS 158
Query: 115 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVR 167
Y A ++HQL R A E +RVN +A G +A + +
Sbjct: 159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPG-------YVATEMTLKMRERPELFETWL 211
Query: 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ P+ R + ++A+ ++L S + Y+TG + VDG ++
Sbjct: 212 DMTPMGRCGEPS-EIAAAALFLASPAASYVTGAILAVDGGYTV 253
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 1e-27
Identities = 51/197 (25%), Positives = 76/197 (38%), Gaps = 20/197 (10%)
Query: 22 REGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 77
+ VD LG LD V Q + ++F+ ++ IN W
Sbjct: 84 DFDRLRKVVDDGVAALGRLDIIVANAGVA-----APQAWDDITPEDFRDVMDINVTGTWN 138
Query: 78 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 137
+ A R+ E GGSI+ ++S G + P Y A ++ L R A E+GKH
Sbjct: 139 TVMAGAPRIIEGGRGGSIILISSAAG-MKM-QPFMIHYTASKHAVTGLARAFAAELGKHS 196
Query: 138 IRVNGIARGL--------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
IRVN + G + A+ + V + + D+A TV +L
Sbjct: 197 IRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPE-DIADTVCWL 255
Query: 190 ISDGSRYMTGTTIYVDG 206
SD SR +T I VD
Sbjct: 256 ASDESRKVTAAQIPVDQ 272
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 2e-27
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 27 DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
+ +D+ + LD + + + G + D E ++ + +N + + ++KA
Sbjct: 62 KKQIDQFANEVERLDVLFNVAGFVHHGTVLD---CEEKDWDFSMNLNVRSMYLMIKAFLP 118
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+M K G+I+ ++S+ + +G+ Y A++ L ++ A + + IR N +
Sbjct: 119 KMLAQK-SGNIINMSSVASSVKGV-VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC 176
Query: 145 RGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
G LQ+ E A + R+ + ++A +YL SD S Y+TG
Sbjct: 177 PGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAE-EIAMLCVYLASDESAYVTGN 235
Query: 201 TIYVDGAQSI 210
+ +DG S+
Sbjct: 236 PVIIDGGWSL 245
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-27
Identities = 44/211 (20%), Positives = 76/211 (36%), Gaps = 25/211 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWF 77
E D +D G LD + + + Q+ D + +N
Sbjct: 69 EVSVRALIDFTIDT----FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 78 LLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 137
+ K R+ + GG+IV ++S + AY A+I L R A + G+H
Sbjct: 125 MCKYAIPRLISAG-GGAIVNISSATA-HAAY-DMSTAYACTKAAIETLTRYVATQYGRHG 181
Query: 138 IRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
+R N IA G + + V + R + ++A V +L S
Sbjct: 182 VRCNAIAPG-------LVRTPRLEVGLPQPIVDIFATHHLAGRIGEPH-EIAELVCFLAS 233
Query: 192 DGSRYMTGTTIYVDG---AQSITRPRMRSYM 219
D + ++TG I D A P++R+ +
Sbjct: 234 DRAAFITGQVIAADSGLLAHLPGLPQIRASV 264
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-27
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 16/186 (8%)
Query: 27 DEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83
+E + + + G +D FV +G D D + K++ ++ ++ +G
Sbjct: 99 EETISQQEKDFGTIDVFVANAGVTWTQGPEID--VDNYDSWNKIISVDLNGVYYCSHNIG 156
Query: 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
+ K++ GS++ +SI G + A Y A+ L ++ A+E RVN I
Sbjct: 157 KIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTI 214
Query: 144 ARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
+ G + D + + PL R + +L +YL S+ S + TG+
Sbjct: 215 SPGYIDTDITDFAS-----KDMKAKWWQLTPLGREGLTQ-ELVGGYLYLASNASTFTTGS 268
Query: 201 TIYVDG 206
+ +DG
Sbjct: 269 DVVIDG 274
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-27
Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 21/197 (10%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLK 80
DKA G LD + G +V ++ F K+ +N +F+ +
Sbjct: 83 PSEVVALFDKAVSHFGGLDFVMSN---SGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ 139
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
+ + GG I+ +SI G+ P A Y A++ R A++ G + V
Sbjct: 140 QGLKHCRR---GGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195
Query: 141 NGIA-----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
N IA H + QE+ + + PL R D+ V L
Sbjct: 196 NCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA-DIGRAVSAL 254
Query: 190 ISDGSRYMTGTTIYVDG 206
+ S ++ G I + G
Sbjct: 255 CQEESEWINGQVIKLTG 271
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 5e-27
Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 29/228 (12%)
Query: 4 SLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVH----------CYTYEG 51
+ + G + D+ ++ +D + + G D V+ +
Sbjct: 58 AARAGS-AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT 116
Query: 52 KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE----SKAGGSIVFLTSIIGAERG 107
+ + + +L N VAP FL++A RR E S+V L + +
Sbjct: 117 NGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT-DLP 175
Query: 108 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI---AVGQERAVK 164
L PG Y ++ L R AA+E+ IRVN +A G + +
Sbjct: 176 L-PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPG-------LSLLPPAMPQETQE 227
Query: 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
R PL + +A + +L+S + Y+TGTT+ VDG + R
Sbjct: 228 EYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-27
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 23 EGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
+ A+ LG LD V P+ G+D + ++ +N +
Sbjct: 86 RESLSAALQAGLDELGRLDIVVANAGIA---------PMSAGDDGWHDVIDVNLTGVYHT 136
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIG--AERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+K + + GGSIV ++S G PG+ Y A + L+R A +
Sbjct: 137 IKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQ 196
Query: 137 KIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
IRVN I ++ + A P+ L + D+A+ V
Sbjct: 197 MIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPV-EVLAPE-DVANAVA 254
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L+SD +RY+TG T+ VD
Sbjct: 255 WLVSDQARYITGVTLPVDA 273
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-27
Identities = 47/195 (24%), Positives = 75/195 (38%), Gaps = 19/195 (9%)
Query: 23 EGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
+ A E V + G LD V ++ ++++ ++ +N W
Sbjct: 89 DAALRELVADGMEQFGRLDVVVANAGVL-----SWGRVWELTDEQWDTVIGVNLTGTWRT 143
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
L+A M E+ GGSIV ++S G + PG Y A + L T A+E+G++ I
Sbjct: 144 LRATVPAMIEAGNGGSIVVVSSSAG-LKA-TPGNGHYSASKHGLTALTNTLAIELGEYGI 201
Query: 139 RVNGIARG-------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
RVN I A + ++ ++A V +L
Sbjct: 202 RVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTAD-EVADVVAWLAG 260
Query: 192 DGSRYMTGTTIYVDG 206
DGS +TGT I VD
Sbjct: 261 DGSGTLTGTQIPVDK 275
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-27
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 30/208 (14%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
EE+ FD A + G +D ++ GK+ + E EF + IN +
Sbjct: 75 EEEVAKLFDFAEKE----FGKVDIAINT---VGKVLKKPIVETSEAEFDAMDTINNKVAY 127
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
F +K + M G I+ + + + + Y A + R A+ E+ K
Sbjct: 128 FFIKQAAKHMNP---NGHIITIATSLL--AAYTGFYSTYAGNKAPVEHYTRAASKELMKQ 182
Query: 137 KIRVNGIARGLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI 190
+I VN IA G P+ + + + A ++ ++ D+A + +L
Sbjct: 183 QISVNAIAPG-------PMDTSFFYGQETKESTAFHKSQAMGNQLTKIE-DIAPIIKFLT 234
Query: 191 SDGSRYMTGTTIYVDGAQSITRPRMRSY 218
+DG ++ G TI+ +G + TR +
Sbjct: 235 TDGW-WINGQTIFANGGYT-TREGHHHH 260
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 8e-27
Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 13/193 (6%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E+ E D + +D V E + +++ + + P
Sbjct: 56 EQKPERLVDATLQH----GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPI 111
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
LL++ ++ + G S++F+TS +G + L YG A+ LV +AA + +
Sbjct: 112 LLLQSAIAPLRAAG-GASVIFITSSVGK-KPL-AYNPLYGPARAATVALVESAAKTLSRD 168
Query: 137 KIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG 193
I + I + V PL R ++ + + +L S
Sbjct: 169 GILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPD-EMGALITFLASRR 227
Query: 194 SRYMTGTTIYVDG 206
+ + G G
Sbjct: 228 AAPIVGQFFAFTG 240
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 8e-27
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E E ++ G +D F + EGK EF K+V IN +
Sbjct: 76 EAQVEAYVTATTER----FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
L+ V + M+E G +V S+ G RG+ + Y A + L R +A+E G++ I
Sbjct: 132 LEKVLKIMREQG-SGMVVNTASVGG-IRGI-GNQSGYAAAKHGVVGLTRNSAVEYGRYGI 188
Query: 139 RVNGIARG------LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
R+N IA G + + +A + + P R+ + ++A+ V +L+SD
Sbjct: 189 RINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAP-EIAAVVAFLLSD 247
Query: 193 GSRYMTGTTIYVDGAQS 209
+ Y+ T + +DG QS
Sbjct: 248 DASYVNATVVPIDGGQS 264
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-26
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 56 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY 115
P + +F++ ++N + + L + V M+++ GG I+ +TS+ E +Y
Sbjct: 103 PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAA-ENKN-INMTSY 159
Query: 116 GACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW 175
+ A+ LVR A ++G+ IRVNGIA G + + +V + + + P+ R
Sbjct: 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA-ILTDALKSVITPEIEQKMLQHTPIRRL 218
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A+ ++L S + +++G + V G
Sbjct: 219 GQPQ-DIANAALFLCSPAASWVSGQILTVSG 248
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 1e-26
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 23/212 (10%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
G V +D+ + A ++A LG D V+ ++ + +
Sbjct: 50 GGHAVAVKVDVSDRDQVFAAVEQARKT----LGGFDVIVNNAGVAPSTPIES---ITPEI 102
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
K+ IN + ++A K+ GG I+ S G G P A Y + ++
Sbjct: 103 VDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG-HVG-NPELAVYSSSKFAVR 160
Query: 124 QLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHR 174
L +TAA ++ I VNG G+ + + A G+ + L R
Sbjct: 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGR 220
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L D+A+ V YL S S YMTG ++ +DG
Sbjct: 221 -LSEPEDVAACVSYLASPDSDYMTGQSLLIDG 251
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-26
Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 19/192 (9%)
Query: 25 AFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
+ + + LG + + + ++ ++F + +N + +AV
Sbjct: 78 IVTKTIQQIDADLGPISGLIANAGVSVVKPA---TELTHEDFAFVYDVNVFGVFNTCRAV 134
Query: 83 GRRMKESKAGGSIVFLTSIIG-----AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK 137
+ + + GSIV +S+ + Y + A+ LV+ A E
Sbjct: 135 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 194
Query: 138 IRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
IRVN ++ G ++ PL+R+ + ++ I L+SD +
Sbjct: 195 IRVNALSPGYVNTDQTAHMD-----KKIRDHQASNIPLNRFAQPE-EMTGQAILLLSDHA 248
Query: 195 RYMTGTTIYVDG 206
YMTG ++DG
Sbjct: 249 TYMTGGEYFIDG 260
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-26
Identities = 33/155 (21%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+V E+++ N F ++ + G S+V S G G P + Y
Sbjct: 120 GEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAG-STGT-PAFSVYA 174
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAP 171
A A++ R +++ IR+N ++ G ++ V Q+ + + P
Sbjct: 175 ASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP 234
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ R + ++A+ ++L SD S ++TG ++VDG
Sbjct: 235 MGRVGRAE-EVAAAALFLASDDSSFVTGAELFVDG 268
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-26
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 54 QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA 113
+V +++++ +N A W L ++ G M G IV + S++ +G A
Sbjct: 120 APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLS-FQGG-RNVA 176
Query: 114 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-------PIAVGQERAVKLV 166
AY A ++ L R A E + VN +A G Y + ERA +
Sbjct: 177 AYAASKHAVVGLTRALASEWAGRGVGVNALAPG------YVVTANTAALRADDERA-AEI 229
Query: 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P RW + D+ ++L SD + Y+ G + VDG
Sbjct: 230 TARIPAGRWATPE-DMVGPAVFLASDAASYVHGQVLAVDG 268
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-26
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 18/194 (9%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
E VD G +D V + + D ++F +++ IN W
Sbjct: 86 DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLID---TTVEDFDRVIAINLRGAWLCT 142
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
K RM E GG+IV L+S+ G + G AYG A I QL R A E+ IR
Sbjct: 143 KHAAPRMIERG-GGAIVNLSSLAGQ-VAV-GGTGAYGMSKAGIIQLSRITAAELRSSGIR 199
Query: 140 VNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
N + + A+G A ++ R + ++A V++L+SD
Sbjct: 200 SNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR--LQGRMAAPE-EMAGIVVFLLSD 256
Query: 193 GSRYMTGTTIYVDG 206
+ +TGTT DG
Sbjct: 257 DASMITGTTQIADG 270
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 3e-26
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
+ FD+AV G+LD V G + V E+EF ++ +N +
Sbjct: 80 VPEIVKLFDQAVAH----FGHLDIAVSN---SGVVSFGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
F+ + R + E GG IV +S + + P + Y ++ VR + + G
Sbjct: 133 FVAREAYRHLTE---GGRIVLTSSNTSKDFSV-PKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 137 KIRVNGIA----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 186
KI VN +A H + E+ ++ A+PLHR + D+A+ V
Sbjct: 189 KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ-DVANVV 247
Query: 187 IYLISDGSRYMTGTTIYVDG 206
+L+S ++ G + +DG
Sbjct: 248 GFLVSKEGEWVNGKVLTLDG 267
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-26
Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 18/197 (9%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFL 78
R + D A+ KA LG D G M+ + + ++E+ +N +
Sbjct: 69 KRA-SVDAAMQKAIDALGGFDLLCAN---AGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+ R S G IV S+ G P A Y A ++ + A E+ I
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAK-VG-APLLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 139 RVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
RVN + + + + E PL R ++ D+A V++L
Sbjct: 183 RVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR-IEEPEDVADVVVFL 241
Query: 190 ISDGSRYMTGTTIYVDG 206
SD +R+MTG I V G
Sbjct: 242 ASDAARFMTGQGINVTG 258
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-26
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFV-------HCYTYEGKMQDP 56
+ V D+ + +E ++ + G D V +G +D
Sbjct: 71 ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDN 130
Query: 57 L--QVGEDEFKKLVKINFVAPWFLLKAVGRRMKES-----KAGGSIVFLTSIIGAERGLY 109
+ E + +L+ N +AP+ L + +R K + + SIV L + ++
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQPC- 188
Query: 110 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169
+ Y ++ L ++AA+E+ + IRVNG+A G+ P+A+G+E R
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV---SLLPVAMGEE-EKDKWRRK 244
Query: 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
PL R +A VI+L+S ++Y+TG+ I VDG S+
Sbjct: 245 VPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLVH 287
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 5e-26
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 14/192 (7%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
D LG LD V+ G++ + + ++ + +N AP+ +
Sbjct: 77 EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITE---TTDADWSLSLGVNVEAPFRIC 133
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+A M + GG+IV + S G R PG A Y A++ L + M+ IR
Sbjct: 134 RAAIPLMAAAG-GGAIVNVASCWGL-RPG-PGHALYCLTKAALASLTQCMGMDHAPQGIR 190
Query: 140 VNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
+N + + +RAV + PL R + + D+A V++L SD +
Sbjct: 191 INAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE-DIADVVLFLASDAA 249
Query: 195 RYMTGTTIYVDG 206
RY+ G+ + V+G
Sbjct: 250 RYLCGSLVEVNG 261
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 7e-26
Identities = 49/208 (23%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G + + E E + V G +DAF+ T + + D
Sbjct: 70 TYGIKAKAYKCQVDSYESCEKLVKDVVAD----FGQIDAFIANAGATADSGILD---GSV 122
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ + +V+++ + KAVG KE GS+V S+ G +Y A
Sbjct: 123 EAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSYNVAKAG 181
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+ R+ A E RVN I+ G L D P + +L P+ R
Sbjct: 182 CIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP-----KETQQLWHSMIPMGRDGLA 235
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
K +L +Y SD S Y TG + +DG
Sbjct: 236 K-ELKGAYVYFASDASTYTTGADLLIDG 262
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 7e-26
Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G + + D+ + + + D + G++ V+ GK++ +
Sbjct: 43 PGEAKYDHIECDVTNPDQVKASIDHIFKE----YGSISVLVNNAGIESYGKIES---MSM 95
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
E+++++ +N ++ K M S+ SIV ++S+ A+AY +
Sbjct: 96 GEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQA-SIIT-KNASAYVTSKHA 152
Query: 122 IHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPL 172
+ L ++ A++ +R N + R + + E+ + P+
Sbjct: 153 VIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM 211
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
R + ++AS V +L S + ++TGT +YVDG SI P
Sbjct: 212 QRIGKPQ-EVASAVAFLASREASFITGTCLYVDGGLSIRAP 251
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 7e-26
Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 31/211 (14%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGE 61
GG+ D+ F A + G +D V+ G M + G+
Sbjct: 75 AGGK-ALTAQADVSDPAAVRRLFATAEEA----FGGVDVLVNN---AGIMPLTTIAETGD 126
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
F +++ +N + L+ +R++ GG I+ +++ L+P Y A A
Sbjct: 127 AVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQV--GLLHPSYGIYAAAKAG 181
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRW 175
+ + + E+ I VN +A G P + + APL R
Sbjct: 182 VEAMTHVLSKELRGRDITVNAVAPG-------PTATDLFLEGKSDEVRDRFAKLAPLERL 234
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A V +L ++ G + +G
Sbjct: 235 GTPQ-DIAGAVAFLAGPDGAWVNGQVLRANG 264
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 7e-26
Identities = 46/201 (22%), Positives = 76/201 (37%), Gaps = 25/201 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
ED F+EAV G LD G + V +EF ++ IN +
Sbjct: 91 VEDIVRMFEEAVKI----FGKLDIVCSN---SGVVSFGHVKDVTPEEFDRVFTINTRGQF 143
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
F+ + + ++ GG ++ + SI G + + P A Y +I R A+++
Sbjct: 144 FVAREAYKHLEI---GGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCMAIDMADK 199
Query: 137 KIRVNGIA-----------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
KI VN +A +E + +PL R D+A
Sbjct: 200 KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARV 258
Query: 186 VIYLISDGSRYMTGTTIYVDG 206
V +L S+ ++TG I +DG
Sbjct: 259 VCFLASNDGGWVTGKVIGIDG 279
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 99.9 bits (250), Expect = 7e-26
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E +R +EA LG +D V+ G V E+++++++N AP
Sbjct: 61 ERERVRFVEEAAYA----LGRVDVLVNNAAIAAPGSALT---VRLPEWRRVLEVNLTAPM 113
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
L R M++ GG+IV + S+ G AAY A + L R+ A+++
Sbjct: 114 HLSALAAREMRKVG-GGAIVNVASVQG-LFAE-QENAAYNASKGGLVNLTRSLALDLAPL 170
Query: 137 KIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
+IRVN +A G + + ++ ER + + L R + ++A V++L S+
Sbjct: 171 RIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASE 229
Query: 193 GSRYMTGTTIYVDG 206
+ ++TG + VDG
Sbjct: 230 KASFITGAILPVDG 243
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 99.1 bits (248), Expect = 9e-26
Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 15/197 (7%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKK 66
G ++ L++E + E + G LD +H + G Q+ +++F +
Sbjct: 62 GQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQ 121
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 126
++ +N A + L +A+ +K S+ SI F +S +G +G AYG + L+
Sbjct: 122 VMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVG-RKGR-ANWGAYGVSKFATEGLM 178
Query: 127 RTAAME-IGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
+T A E G +R N I P A + + PL+ D+
Sbjct: 179 QTLADELEGVTAVRANSIN---------PGATRTGMRAQAYPDENPLNN--PAPEDIMPV 227
Query: 186 VIYLISDGSRYMTGTTI 202
+YL+ S + G +
Sbjct: 228 YLYLMGPDSTGINGQAL 244
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 1e-25
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 18/199 (9%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
A AVD + LG LD V + E+++ +++ IN W +KA
Sbjct: 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKA 146
Query: 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141
M GGSI+ LTS +G + YP Y A + L+R +E+G+H IRVN
Sbjct: 147 GVPHMIAGGRGGSII-LTSSVGGLKA-YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVN 204
Query: 142 GIA--------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
+ + D + + P+ W++ D+++ V+
Sbjct: 205 SVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPI-PWVEPI-DISNAVL 262
Query: 188 YLISDGSRYMTGTTIYVDG 206
+ SD +RY+TG T+ +D
Sbjct: 263 FFASDEARYITGVTLPIDA 281
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 1e-25
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 18/198 (9%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
A AVD LG LD + + ++ ++ ++ +N W +
Sbjct: 101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVA 160
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
+ K GGSIVF +SI G RG Y A +H L+RT A+E+G IRVN
Sbjct: 161 IPHIMAGKRGGSIVFTSSIGG-LRG-AENIGNYIASKHGLHGLMRTMALELGPRNIRVNI 218
Query: 143 IA--------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
+ + D V + P+ +++ D+++ +++
Sbjct: 219 VCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI-PYVEPA-DISNAILF 276
Query: 189 LISDGSRYMTGTTIYVDG 206
L+SD +RY+TG ++ VDG
Sbjct: 277 LVSDDARYITGVSLPVDG 294
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 99.5 bits (249), Expect = 1e-25
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
+D E ++ K G +D V+ + G + + E+ + +++ +N +
Sbjct: 85 AKDAESMVEKTTAK----WGRVDVLVNNAGFGTTGNVVT---IPEETWDRIMSVNVKGIF 137
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
K V M+ + GGSI+ TS + AY A +I L R AM+ K
Sbjct: 138 LCSKYVIPVMRRNG-GGSIINTTSYTA-TSAI-ADRTAYVASKGAISSLTRAMAMDHAKE 194
Query: 137 KIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
IRVN +A G + + A + A + R + ++A +++L SD
Sbjct: 195 GIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE-EIAEAMLFLASD 253
Query: 193 GSRYMTGTTIYVDGAQSITRPRMR 216
SR+ TG+ + VDG SI ++
Sbjct: 254 RSRFATGSILTVDGGSSIGNHLVK 277
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-25
Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 19/199 (9%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVH---CYTYEGKMQDPLQVGEDEFKKLVKINFVAP 75
+ ++ + K G LD V+ + + + + + + +N +
Sbjct: 70 DAGQDEILSTTLGK----FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 125
Query: 76 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 135
L K + +K G IV ++SI P Y A+I Q R A+++ +
Sbjct: 126 IALTKKAVPHLSSTK--GEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDLIQ 182
Query: 136 HKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
H IRVN I+ GL + + + ++E P + D+A + +
Sbjct: 183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ-DIAEVIAF 241
Query: 189 LISD-GSRYMTGTTIYVDG 206
L S Y+ G + VDG
Sbjct: 242 LADRKTSSYIIGHQLVVDG 260
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 98.8 bits (247), Expect = 2e-25
Identities = 39/192 (20%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E+D + E + + G LD V+ + Q P + F++L+++N + + L
Sbjct: 66 EDDVKTLVSETIRR----FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
K ++ K+ G+++ ++S++GA G A Y A ++ + + A++ + +
Sbjct: 122 TKLALPYLR--KSQGNVINISSLVGA-IGQ-AQAVPYVATKGAVTAMTKALALDESPYGV 177
Query: 139 RVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
RVN I+ G ++ + +++ A PL R ++ + ++L S+ +
Sbjct: 178 RVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLASE-A 235
Query: 195 RYMTGTTIYVDG 206
+ TG + V G
Sbjct: 236 NFCTGIELLVTG 247
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 7e-25
Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 27/203 (13%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
DR A + V +A LG +D + + +V ++ +++ N +
Sbjct: 82 DRA-ALESFVAEAEDTLGGIDIAITNAGIS-----TIALLPEVESAQWDEVIGTNLTGTF 135
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ AV M + G IV ++S++G A+Y + + L + AA ++ +
Sbjct: 136 NTIAAVAPGMIKRN-YGRIVTVSSMLGH-SA-NFAQASYVSSKWGVIGLTKCAAHDLVGY 192
Query: 137 KIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
I VN +A ++ + ++ +L + ++
Sbjct: 193 GITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPE-EVT 251
Query: 184 STVIYLISDGSRYMTGTTIYVDG 206
V++L+ + S ++TGT + +D
Sbjct: 252 RAVLFLVDEASSHITGTVLPIDA 274
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 7e-25
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA---GGSIVFLTSIIGAERGLYPGAAAYGA 117
++K++++N + + ++ + ++ S + ++ + S+ G + A AYG
Sbjct: 126 VSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG-ISAMGEQAYAYGP 184
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAA 170
A++HQL R A E+ I VN IA G +A++ +
Sbjct: 185 SKAALHQLSRMLAKELVGEHINVNVIAPG-------RFPSRMTRHIANDPQALEADSASI 237
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P+ RW + ++A+ I L YMTG I +DG
Sbjct: 238 PMGRWGRPE-EMAALAISLAGTAGAYMTGNVIPIDG 272
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 7e-25
Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 25/214 (11%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
+ +D+ EE+ + A ++ K G +D V+ +
Sbjct: 50 SDVNVSDHFKIDVTNEEEVKEAVEKTTKK----YGRIDILVNNAGIEQYSPLHL---TPT 102
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ +++++ +N + + K M GSI+ + S+ AAAY +
Sbjct: 103 EIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQS-YAAT-KNAAAYVTSKHA 159
Query: 122 IHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPL 172
+ L R+ A++ IR N + + ER ++ P+
Sbjct: 160 LLGLTRSVAIDYAPK-IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM 218
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R + ++A V +L SD S ++TG + VDG
Sbjct: 219 GRIGRPE-EVAEVVAFLASDRSSFITGACLTVDG 251
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 8e-25
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
E + V A + G++D V+ + ++ + F+K+V+IN + +
Sbjct: 62 IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLET---ESVERFRKVVEINLTGVFIGM 118
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
K V MK++ GGSIV ++S G GL ++YGA + L + AA+E+G +IR
Sbjct: 119 KTVIPAMKDAG-GGSIVNISSAAGL-MGL-ALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 140 VNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
VN + G+ + E I G+ P+ R + ++A V+ L+SD S Y
Sbjct: 176 VNSVHPGMTYTPMTAETGIRQGEGNY-----PNTPMGRVGNEPGEIAGAVVKLLSDTSSY 230
Query: 197 MTGTTIYVDGAQSITRPRMRSYM 219
+TG + VDG + P ++ M
Sbjct: 231 VTGAELAVDGGWTTG-PTVKYVM 252
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 8e-25
Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 25/214 (11%)
Query: 7 GGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGED 62
G + D+ + LG V+ + ++
Sbjct: 57 PGARLFASVCDVLDALQVRAFAEACERT----LGCASILVNNAGQGRVSTF---AETTDE 109
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+ + +++ F + ++A +++ +IV + S++ + P A A A +
Sbjct: 110 AWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLA-SQP-EPHMVATSAARAGV 166
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGL----------HLQDEYPIAVGQERAVKLVREAAPL 172
LVR+ A E +RVNGI GL ++E + Q A + PL
Sbjct: 167 KNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL 226
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R + A +++L S S Y TG+ I V G
Sbjct: 227 GRLGKPI-EAARAILFLASPLSAYTTGSHIDVSG 259
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 9e-25
Identities = 32/214 (14%), Positives = 62/214 (28%), Gaps = 31/214 (14%)
Query: 13 VVGLDMEEDREGAF------------DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG 60
+ +D E+ ++K +D FV
Sbjct: 49 TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEF 108
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
K ++ +N + + + + + GG V + R G AYGA A
Sbjct: 109 LKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRT--SGMIAYGATKA 163
Query: 121 SIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+ H +++ A E G GI + R A W +
Sbjct: 164 ATHHIIKDLASENGGLPAGSTSLGILPV-------TLDTPTNRKYM---SDANFDDWTPL 213
Query: 179 KNDLASTVI-YLISDGSRYMTGTTIYVDGAQSIT 211
++A + + + SR G+ + + +T
Sbjct: 214 S-EVAEKLFEWSTNSDSRPTNGSLVKFETKSKVT 246
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 9e-25
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++ V+ + P+ L+ AV +MK+ K G I+F+TS + Y + A
Sbjct: 94 VEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW--KELSTYTSARA 150
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLH 173
L + E+G++ I V I + P E V V++ L
Sbjct: 151 GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEH-VAHVKKVTALQ 209
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R K +L V +L S Y+TG ++ G
Sbjct: 210 RLGTQK-ELGELVAFLASGSCDYLTGQVFWLAG 241
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 1e-24
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 8/194 (4%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81
+E D AV+ A G +D V+ K Q+ V +EF ++V +N + +
Sbjct: 66 KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSK 125
Query: 82 VGRRMKESKAG---GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+ KE+ A I+ + S GA R P A Y A + + + A+E+ KI
Sbjct: 126 LIPHFKENGAKGQECVILNVAST-GAGRPR-PNLAWYNATKGWVVSVTKALAIELAPAKI 183
Query: 139 RVNGIARGLHLQD--EYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
RV + + E K R++ P+ R L DLA +L S +
Sbjct: 184 RVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPD-DLAEAAAFLCSPQASM 242
Query: 197 MTGTTIYVDGAQSI 210
+TG + VDG +SI
Sbjct: 243 ITGVALDVDGGRSI 256
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 1e-24
Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++ K++ N + + + E+ G+++ ++S+ + +P Y A
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIP-WPLFVHYAASKG 163
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
+ + T A+E IRVN I G V P+ + +
Sbjct: 164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE- 222
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
++A+ +L S + Y+TG T++ DG
Sbjct: 223 EIAAVAAWLASSEASYVTGITLFADG 248
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 1e-24
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGE 61
G + V VV ++ + F + + G LD FV+ ++ E
Sbjct: 52 LGVK-VLVVKANVGQPAKIKEMFQQIDET----FGRLDVFVNN---AASGVLRPVMELEE 103
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+ + IN A F + + M+++ GG IV ++S+ R L G A+
Sbjct: 104 THWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGS-IRYL-ENYTTVGVSKAA 160
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ L R A+E+ +I VN ++ G D +E ++ R+ P R +++K D
Sbjct: 161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIK-D 219
Query: 182 LASTVIYLISDGSRYMTGTTIYVDG 206
+ TV +L+S + + G TI VDG
Sbjct: 220 MVDTVEFLVSSKADMIRGQTIIVDG 244
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 1e-24
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
+ A D AV G L V+ G ++D E+++++ +N +
Sbjct: 65 PAQWKAAVDTAVTA----FGGLHVLVNNAGILNIGTIED---YALTEWQRILDVNLTGVF 117
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
++AV + MKE+ GSI+ ++SI G G Y A ++ L ++ A+E+G
Sbjct: 118 LGIRAVVKPMKEAG-RGSIINISSIEGL-AG-TVACHGYTATKFAVRGLTKSTALELGPS 174
Query: 137 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
IRVN I G + V L R + ++++ V+YL SD S Y
Sbjct: 175 GIRVNSIHPG-------LVKTPMTDWVPEDIFQTALGRAAEPV-EVSNLVVYLASDESSY 226
Query: 197 MTGTTIYVDG 206
TG VDG
Sbjct: 227 STGAEFVVDG 236
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 2e-24
Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 24/197 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E D A +++ G +D V+ T + ++F K++ +N +
Sbjct: 64 EGDVNAAIAATMEQ----FGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+AV M G IV + S+ PG +AY ++ QL ++ A++
Sbjct: 120 LGCRAVLPHMLLQG-AGVIVNIASVAS-LVAF-PGRSAYTTSKGAVLQLTKSVAVDYAGS 176
Query: 137 KIRVNGIARGLHLQDEYPIA-------VGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
IR N + G I + Q V P +A V++L
Sbjct: 177 GIRCNAVCPG-------MIETPMTQWRLDQPELRDQVLARIPQKEIGTAA-QVADAVMFL 228
Query: 190 ISDGSRYMTGTTIYVDG 206
+ + Y+ G + +DG
Sbjct: 229 AGEDATYVNGAALVMDG 245
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 2e-24
Identities = 39/211 (18%), Positives = 62/211 (29%), Gaps = 39/211 (18%)
Query: 23 EGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWF 77
A + A G LD A G + F ++FV
Sbjct: 83 RAAVSRELANAVAEFGKLDVVVANA--------GICPLGAHLPVQAFADAFDVDFVGVIN 134
Query: 78 LLKAVGRRMKESKAGGSIVFLTSIIG---------AERGLYPGAAAYGACAASIHQLVRT 128
+ A + G SI+ S+ G A PG A Y +
Sbjct: 135 TVHAALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQ 191
Query: 129 AAMEIGKHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRW 175
A ++ IR N I + + + + A +
Sbjct: 192 LAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPY 251
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++ D+++ V +L SD SRY+TG VD
Sbjct: 252 VEAS-DISNAVCFLASDESRYVTGLQFKVDA 281
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 95.6 bits (239), Expect = 3e-24
Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 20/199 (10%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
++D E + +D + + +V ++ +++++ +N + ++
Sbjct: 68 KKDVEEFVRRTFET----YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
+AV M + G IV SI G RG A Y + L R+ A G I
Sbjct: 124 SRAVIPIMLKQG-KGVIVNTASIAG-IRGG-FAGAPYTVAKHGLIGLTRSIAAHYGDQGI 180
Query: 139 RVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
R + G L + + R + + D+A+ +++L S
Sbjct: 181 RAVAVLPGTVKTNIGLGSSKPSE-----LGMRTLTKLMSLSSRLAEPE-DIANVIVFLAS 234
Query: 192 DGSRYMTGTTIYVDGAQSI 210
D + ++ G + VDG ++
Sbjct: 235 DEASFVNGDAVVVDGGLTV 253
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 95.6 bits (239), Expect = 3e-24
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 17/192 (8%)
Query: 22 REGAFDEAVDKACQILGNLDAFV-----HCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E + + D + G + V + + E++KL+ +N +
Sbjct: 65 DEDGWTKLFDATEKAFGPVSTLVNNAGI------AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG-- 134
F + +RMK G SI+ ++SI G G P AY A ++ + ++AA++
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEG-FVGD-PSLGAYNASKGAVRIMSKSAALDCALK 176
Query: 135 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
+ +RVN + G G E A+ R P+ + D+A +YL S+ S
Sbjct: 177 DYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEPN-DIAYICVYLASNES 234
Query: 195 RYMTGTTIYVDG 206
++ TG+ VDG
Sbjct: 235 KFATGSEFVVDG 246
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 3e-24
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ +++ N +++ KAV + GGSIV + + G +P A GA A
Sbjct: 121 SKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVP--TKAG-FPLAVHSGAARA 176
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---------VGQERAVKLVREAAP 171
++ L ++ A+E IR+N +A G I + + + P
Sbjct: 177 GVYNLTKSLALEWACSGIRINCVAPG-------VIYSQTAVENYGSWGQSFFEGSFQKIP 229
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
R + V +++S V +L+S + ++TG ++ VDG +S+
Sbjct: 230 AKR-IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 4e-24
Identities = 44/211 (20%), Positives = 83/211 (39%), Gaps = 27/211 (12%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G VE V D+ E + + V+K G LD V+ + + D + +
Sbjct: 70 LGLGRVEAVVCDVTSTEAVDALITQTVEK----AGRLDVLVNNAGLGGQTPVVD---MTD 122
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+E+ +++ + + +A R + GG IV S++G R + Y A A
Sbjct: 123 EEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW-RAQ-HSQSHYAAAKAG 180
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRW 175
+ L R +A+E + +R+N ++ + + + R
Sbjct: 181 VMALTRCSAIEAVEFGVRINAVSPSI-------ARHKFLEKTSSSELLDRLASDEAFGRA 233
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+T+ +L SD S YMTG + V
Sbjct: 234 AEPW-EVAATIAFLASDYSSYMTGEVVSVSS 263
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 4e-24
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVH----CYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
D + VD+A G++D V + + + + ++ +++ N + W
Sbjct: 118 DLA-SLQAVVDEALAEFGHIDILVSNVGIS-----NQGEVVSLTDQQWSDILQTNLIGAW 171
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+AV M E GGS++F++S +G RG PG + Y A + L+ + A E+G+H
Sbjct: 172 HACRAVLPSMIERGQGGSVIFVSSTVGL-RG-APGQSHYAASKHGVQGLMLSLANEVGRH 229
Query: 137 KIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
IRVN + ++ A + W++ + D++
Sbjct: 230 NIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPE-DVS 288
Query: 184 STVIYLISDGSRYMTGTTIYVDG 206
+ V +L SD +RY+ G I VDG
Sbjct: 289 NAVAWLASDEARYIHGAAIPVDG 311
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 8e-24
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 17/191 (8%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
E +D +L A VH + D F ++ ++ +AP+ +
Sbjct: 82 CETGIMAFIDLLKTQTSSLRAVVHNASEWL----AETPGEEADNFTRMFSVHMLAPYLIN 137
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+ S+ IV ++ + +G AY A A + L + A ++
Sbjct: 138 LHCEPLLTASE-VADIVHISDDVT-RKGS-SKHIAYCATKAGLESLTLSFAARFAPL-VK 193
Query: 140 VNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTG 199
VNGIA L + + L + + ++ YL+ S Y+TG
Sbjct: 194 VNGIAPALLMFQP----KDDAAYRANALAKSALGIEPGAE-VIYQSLRYLLD--STYVTG 246
Query: 200 TTIYVDGAQSI 210
TT+ V+G + +
Sbjct: 247 TTLTVNGGRHV 257
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 1e-23
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
QV E + + +N +F ++ + ++E GGSIVF +S+ E G PG + Y
Sbjct: 99 DQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVAD-EGGH-PGMSVYS 153
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPL 172
A A++ A E+ IRVN ++ G + L P+
Sbjct: 154 ASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM 213
Query: 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG--AQSIT 211
R ++A V++L + + + TG + VDG Q ++
Sbjct: 214 KRNGTAD-EVARAVLFLAFE-ATFTTGAKLAVDGGLGQKLS 252
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 1e-23
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 10/186 (5%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLLK 80
+ D+ G +D V+ G M+ + + +KK + +N + +
Sbjct: 70 PESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR 129
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
AV ++M + GG+IV +S + + YG I+ L + + E+G IR+
Sbjct: 130 AVYKKMTKRG-GGAIVNQSSTAA-----WLYSNYYGLAKVGINGLTQQLSRELGGRNIRI 183
Query: 141 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
N IA G + E + V + + PL R DL ++L+SD + ++TG
Sbjct: 184 NAIAPGP-IDTEANRTTTPKEMVDDIVKGLPLSRMGTPD-DLVGMCLFLLSDEASWITGQ 241
Query: 201 TIYVDG 206
VDG
Sbjct: 242 IFNVDG 247
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 1e-23
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 16/211 (7%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVD--KACQILGNLDAFVHCYTYEGKMQDPL--QV 59
GG +G ++ E + + + D ++ G +
Sbjct: 55 NGGSAF-SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINN---AGIGPGAFIEET 110
Query: 60 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA 119
E F ++V +N AP+F+++ R+++ I+ ++S R P AY
Sbjct: 111 TEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAAT--RISLPDFIAYSMTK 165
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 179
+I+ + T A ++G I VN I G D + + + +R +V+
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVE 225
Query: 180 NDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
D+A T +L S SR++TG I V G +
Sbjct: 226 -DIADTAAFLASPDSRWVTGQLIDVSGGSCL 255
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 1e-23
Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 25/194 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPW 76
E E A E V+ LG LD V+ G + +F +++ +NF AP+
Sbjct: 93 AEAIEQAIRETVEA----LGGLDILVNS---AGIWHSAPLEETTVADFDEVMAVNFRAPF 145
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+++ R + + GG I+ + S + +PG + Y A A++ L + A ++G
Sbjct: 146 VAIRSASRHLGD---GGRIITIGSNLAELVP-WPGISLYSASKAALAGLTKGLARDLGPR 201
Query: 137 KIRVNGIARGLHLQDEYPIA----VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
I VN + G + RE + + + D+A V +L
Sbjct: 202 GITVNIVHPG-------STDTDMNPADGDHAEAQRERIATGSYGEPQ-DIAGLVAWLAGP 253
Query: 193 GSRYMTGTTIYVDG 206
+++TG ++ +DG
Sbjct: 254 QGKFVTGASLTIDG 267
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 94.6 bits (236), Expect = 1e-23
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 23/201 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQD-PLQVGEDEFKKLVKINFVA 74
+D++ A + + G +D + + Y + D P + F + +N
Sbjct: 63 LQDQKRAAERCLAA----FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 75 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
+KA + S GS+VF S G G Y A ++ LVR A E+
Sbjct: 119 YIHAVKACLPALVSS--RGSVVFTISNAGF-YPN-GGGPLYTATKHAVVGLVRQMAFELA 174
Query: 135 KHKIRVNGIA--------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 186
H +RVNG+A RG ++ +++ P+ R ++ +
Sbjct: 175 PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALE-EYTGAY 232
Query: 187 IYLISDG-SRYMTGTTIYVDG 206
++ + G S TG + DG
Sbjct: 233 VFFATRGDSLPATGALLNYDG 253
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 1e-23
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 23/194 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
+ E A A DK G + VH + ++ E + +++ +N + +
Sbjct: 70 AAEVEAAISAAADK----FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
K +M + GG+IV +S G G PGA AY ++ R A E+G KI
Sbjct: 126 AKTALPKMAK---GGAIVTFSSQAG-RDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KI 180
Query: 139 RVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
RVN + G I + + V A L R + D+A V +L SD
Sbjct: 181 RVNAVCPG-------MISTTFHDTFTKPEVRERVAGATSLKREGSSE-DVAGLVAFLASD 232
Query: 193 GSRYMTGTTIYVDG 206
+ Y+TG ++G
Sbjct: 233 DAAYVTGACYDING 246
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-23
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 54 QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGL 108
+ E L N +AP+FL+KA R+ + A SI+ + + + L
Sbjct: 133 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT-NQPL 191
Query: 109 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168
G Y ++ L R+AA+E+ +IRVNG+ GL + + + R
Sbjct: 192 -LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD----DMPPAVWEGHRS 246
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
PL++ +++ VI+L S ++Y+TGT + VDG S+TR
Sbjct: 247 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 3e-23
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 54 QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGL 108
+ E L N +AP+FL+KA R+ + A SI+ + + + L
Sbjct: 170 VGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT-NQPL 228
Query: 109 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168
G Y ++ L R+AA+E+ +IRVNG+ GL + + + R
Sbjct: 229 -LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD----DMPPAVWEGHRS 283
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
PL++ +++ VI+L S ++Y+TGT + VDG S+TR
Sbjct: 284 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 3e-23
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD-PLQVGEDEF 64
G + ++ E+ RE A+D+ G + V+ G P + +F
Sbjct: 60 GGKAIGLECNVTDEQHREAVIKAALDQ----FGKITVLVNN---AGGGGPKPFDMPMSDF 112
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ K+N + + L + M+++ GG+I+ ++S+ G A+YG+ A+++
Sbjct: 113 EWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGE-NTN-VRMASYGSSKAAVNH 169
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA------VGQERAVKLVREAAPLHRWLDV 178
L R A ++G IRVN IA G I V + + + PL R +
Sbjct: 170 LTRNIAFDVGPMGIRVNAIAPGA-------IKTDALATVLTPEIERAMLKHTPLGRLGEA 222
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A+ ++L S + +++G + V G
Sbjct: 223 Q-DIANAALFLCSPAAAWISGQVLTVSG 249
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 3e-23
Identities = 36/198 (18%), Positives = 78/198 (39%), Gaps = 19/198 (9%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFV--HCYTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
++ + + K G +D V + + ++K K+NF A
Sbjct: 90 ASGQDDIINTTLAK----FGKIDILVNNAGANLADGTAN-TDQPVELYQKTFKLNFQAVI 144
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ + + K G IV ++SI+ + + G Y A++ Q R A+++ +H
Sbjct: 145 EMTQKTKEHLI--KTKGEIVNVSSIVAGPQA-HSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 137 KIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
+RVN ++ G + + + +E P+ + ++A+ +++L
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE-EIANIIVFL 260
Query: 190 IS-DGSRYMTGTTIYVDG 206
+ S Y+ G +I DG
Sbjct: 261 ADRNLSSYIIGQSIVADG 278
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 92.5 bits (231), Expect = 4e-23
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 19/195 (9%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E D + LG L+ V+ G D ++F +L+KIN + +
Sbjct: 64 EADWTLVMAAVQRR----LGTLNVLVNNAGILLPG---DMETGRLEDFSRLLKINTESVF 116
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ MK + GGSI+ + S+ + A Y A A++ L R AA+ K
Sbjct: 117 IGCQQGIAAMK--ETGGSIINMASVSSW-LPI-EQYAGYSASKAAVSALTRAAALSCRKQ 172
Query: 137 --KIRVNGIARGLH---LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
IRVN I + + V + R + +A V++L S
Sbjct: 173 GYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE-RIAQLVLFLAS 231
Query: 192 DGSRYMTGTTIYVDG 206
D S M+G+ ++ D
Sbjct: 232 DESSVMSGSELHADN 246
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 4e-23
Identities = 41/222 (18%), Positives = 86/222 (38%), Gaps = 27/222 (12%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G V D+ + + + AV G +D+ V +Q+ ++ + +K
Sbjct: 49 GDRFFYVVGDITEDSVLKQLVNAAVKG----HGKIDSLVANAGVLEPVQNVNEIDVNAWK 104
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
KL INF + L+ +K K G++VF++S + AYG+ A+++
Sbjct: 105 KLYDINFFSIVSLVGIALPELK--KTNGNVVFVSSDAC--NMYFSSWGAYGSSKAALNHF 160
Query: 126 VRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
T A E + +++ +A G+ ++++ + +K+ R ++ LD
Sbjct: 161 AMTLANE--ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS 218
Query: 179 KNDLASTVIYLISDG-SRYMTGTTIYVDGAQSITRPRMRSYM 219
A+ L G + G + + P + +M
Sbjct: 219 S-VPATVYAKLALHGIPDGVNGQYLSYND------PALADFM 253
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 6e-23
Identities = 29/186 (15%), Positives = 50/186 (26%), Gaps = 18/186 (9%)
Query: 29 AVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88
A +DA + + + K + + +KE
Sbjct: 66 AEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE 125
Query: 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARG 146
GG + + A G PG YG ++HQL ++ A + +
Sbjct: 126 ---GGLLTLAGAK-AALDG-TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV 180
Query: 147 LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ R A W ++ L T I+ R +G+ I V
Sbjct: 181 -------TLDTPMNRKS---MPEADFSSWTPLE-FLVETFHDWITGNKRPNSGSLIQVVT 229
Query: 207 AQSITR 212
T
Sbjct: 230 TDGKTE 235
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 2e-22
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
+ G V G D+ + A VD A + +G +D V+ + ++D ++
Sbjct: 52 QHGVKVLYDGADLS--KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED---FPTEK 106
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ ++ +N A + A MK+ G I+ + S G +AY A +
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGL-VA-SANKSAYVAAKHGVV 163
Query: 124 QLVRTAAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLH 173
+ A+E I N I G + E + A +L+ E P
Sbjct: 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL 223
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+++ + L T ++L SD + +TGTT+ VDG
Sbjct: 224 QFVTPE-QLGGTAVFLASDAAAQITGTTVSVDG 255
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 2e-22
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
K G V V +D+ E + + G D V+ G + ++ +++
Sbjct: 54 KFGVRVLEVAVDVATPEGVDAVVESVRSS----FGGADILVNN-AGTGSNETIMEAADEK 108
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
++ ++ +A L + + M+ GG+I+ SI + Y A++
Sbjct: 109 WQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQ--PLWYEPIYNVTKAALM 165
Query: 124 QLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQ---ERAVKLVREAAPLH 173
+T A E+ K IRVN I GL E G + E AP+
Sbjct: 166 MFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIK 225
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R+ + +LA+ ++L S+ + Y G+ +VDG
Sbjct: 226 RFASPE-ELANFFVFLCSERATYSVGSAYFVDG 257
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 2e-22
Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 23/201 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV 73
E+ ++ + + + G +D A G G D + K +K+N
Sbjct: 70 EDGQDQIINSTLKQ----FGKIDVLVNNAGAAIPDAFGTTGT--DQGIDIYHKTLKLNLQ 123
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
A + K V + SK G IV ++SI+ + P Y A++ Q R+ A+++
Sbjct: 124 AVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQA-QPDFLYYAIAKAALDQYTRSTAIDL 180
Query: 134 GKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 186
K IRVN ++ G+ + + + +E P+ + +A+ +
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE-HIANII 239
Query: 187 IYLISDG-SRYMTGTTIYVDG 206
++L S Y+ G +I DG
Sbjct: 240 LFLADRNLSFYILGQSIVADG 260
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 5e-22
Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 26/214 (12%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGE 61
G V V D+ + AV++ G +D + + +
Sbjct: 57 LGSGKVIGVQTDVSDRAQCDALAGRAVEE----FGGIDVVCANAGVFPDAPL---ATMTP 109
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
++ + +N ++ ++A + S G +V +SI G G YPG + YGA A+
Sbjct: 110 EQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG-YPGWSHYGATKAA 167
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWL 176
+RTAA+E+ HKI VN I G I E + + + P
Sbjct: 168 QLGFMRTAAIELAPHKITVNAIMPGN-------IMTEGLLENGEEYIASMARSIPAGALG 220
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ D+ +L + + Y+TG I VDG Q +
Sbjct: 221 TPE-DIGHLAAFLATKEAGYITGQAIAVDGGQVL 253
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 7e-22
Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 20/210 (9%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFK 65
G D+ + A + G +D V+ + ++ + +
Sbjct: 50 GVKAVHHPADLS--DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQ---FPLESWD 104
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K++ +N A + + M+ G I+ + S+ G G G AAY A + L
Sbjct: 105 KIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGL-VG-STGKAAYVAAKHGVVGL 161
Query: 126 VRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAPLHRWL 176
+ +E + N I + + L+ E P ++
Sbjct: 162 TKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFV 221
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ L V++L S+ + G VDG
Sbjct: 222 TPE-HLGELVLFLCSEAGSQVRGAAWNVDG 250
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 7e-22
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 4/146 (2%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+++KK +IN + + + KA MK + G I+ LTS + Y + A
Sbjct: 103 FEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW-LKI-EAYTHYISTKA 159
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
+ R A ++GK I VN IA L + L + R
Sbjct: 160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL- 218
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
DL +L SD + ++TG T+ VDG
Sbjct: 219 DLTGAAAFLASDDASFITGQTLAVDG 244
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 89.1 bits (222), Expect = 7e-22
Identities = 31/155 (20%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++++ +N + L + + + + GG+IV + S G +AYGA A
Sbjct: 95 KEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH-TP-RIGMSAYGASKA 151
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAAP 171
++ L + +E+ +R N ++ R L + + + P
Sbjct: 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLW-VSDDAEEQRIRGFGEQFKLGIP 210
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L + + ++A+T+++L SD + ++T I VDG
Sbjct: 211 LGKIARPQ-EIANTILFLASDLASHITLQDIVVDG 244
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 7e-22
Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 21/190 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E+ A VD G +D V+ + D F + ++N +
Sbjct: 74 EDQVRAAVAATVDT----FGGIDILVNNASAIWLRGTLD---TPMKRFDLMQQVNARGSF 126
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+A + ++ I+ L + Y + + A E G
Sbjct: 127 VCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQ 185
Query: 137 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
+ +N + P V A+ ++ +A +++ +
Sbjct: 186 GVAINALW---------PRTVIATDAINML-PGVDAAACRRP-EIMADAAHAVLTREAAG 234
Query: 197 MTGTTIYVDG 206
G + D
Sbjct: 235 FHGQFLIDDE 244
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-21
Identities = 25/218 (11%), Positives = 59/218 (27%), Gaps = 35/218 (16%)
Query: 13 VVGLDMEEDREGA------FDEAVDKACQIL----------GNLDAFVHCYTYEGKMQDP 56
V+ +D+ + + ++ + Q + +D
Sbjct: 30 VLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSAS 89
Query: 57 LQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116
+ ++K + + K +K GG + + A P YG
Sbjct: 90 SKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAA-AAMGPT-PSMIGYG 144
Query: 117 ACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 174
A++H L + A + V I + R A
Sbjct: 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPV-------TLDTPMNRK---WMPNADHSS 194
Query: 175 WLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSIT 211
W + ++ ++ ++ SR +G + + +
Sbjct: 195 WTPLS-FISEHLLKWTTETSSRPSSGALLKITTENGTS 231
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 88.4 bits (220), Expect = 2e-21
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 25/198 (12%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPL-QVGEDEFKKLVKINFVAP 75
D F + G LD V+ G + ++ + ++++++N
Sbjct: 88 AADIAAMFSAVDRQ----FGRLDGLVNN---AGIVDYPQRVDEMSVERIERMLRVNVTGS 140
Query: 76 WFLLKAVGRRM--KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
RRM S GG+IV ++S+ G Y A A+I A E+
Sbjct: 141 ILCAAEAVRRMSRLYSGQGGAIVNVSSMAA-ILGSATQYVDYAASKAAIDTFTIGLAREV 199
Query: 134 GKHKIRVNGIARG-----LHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
IRVN + G LH + G + + + P+ R + ++A ++Y
Sbjct: 200 AAEGIRVNAVRPGIIETDLHA------SGGLPDRAREMAPSVPMQRAGMPE-EVADAILY 252
Query: 189 LISDGSRYMTGTTIYVDG 206
L+S + Y+TG+ + V G
Sbjct: 253 LLSPSASYVTGSILNVSG 270
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 4e-21
Identities = 29/160 (18%), Positives = 59/160 (36%), Gaps = 19/160 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKA----GGSIVFLTSIIGAERGLYPGAAAYG 116
+ + ++ N + K + + +++ SI G G PGA YG
Sbjct: 107 DTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG-HTGGGPGAGLYG 165
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAP 171
A A +H + + K +R N ++ G + A + + P
Sbjct: 166 AAKAFLHNVHKNWVDFHTKDGVRFNIVSPG-------TVDTAFHADKTQDVRDRISNGIP 218
Query: 172 LHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSI 210
+ R+ + ++A ++ S S Y+TG + ++G Q
Sbjct: 219 MGRFGTAE-EMAPAFLFFASHLASGYITGQVLDINGGQYK 257
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 5e-21
Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 20/191 (10%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E V KA + LG LD + + + + ++F++ +N A +++ +
Sbjct: 112 ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEA 171
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
+ + G SI+ +SI A + P Y A A+I R A ++ + IRVN
Sbjct: 172 IPLLPK---GASIITTSSIQ-AYQP-SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNI 226
Query: 143 IARGLHLQDEYPI-------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 195
+A G PI + + + P+ R +LA +YL S S
Sbjct: 227 VAPG-------PIWTALQISGGQTQDKIPQFGQQTPMKRAGQP-AELAPVYVYLASQESS 278
Query: 196 YMTGTTIYVDG 206
Y+T V G
Sbjct: 279 YVTAEVHGVCG 289
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 5e-21
Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 14/205 (6%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
+ G V V D+ + F + LD V+ +V ++
Sbjct: 80 RTGNIVRAVVCDVGDPDQVAALFAAVRAE----FARLDLLVNNAGSNVPPVPLEEVTFEQ 135
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKE-SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+ +V N + + R MK + GG I+ SI + P +A Y A +I
Sbjct: 136 WNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA-QTP-RPNSAPYTATKHAI 193
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 182
L ++ A++ H I I G + V + ++ +
Sbjct: 194 TGLTKSTALDGRMHDIACGQIDIGN---AATDMTARMSTGVLQANGEVAAEPTIPIE-HI 249
Query: 183 ASTVIYLISDG-SRYMTGTTIYVDG 206
A V+Y+ S S + T+
Sbjct: 250 AEAVVYMASLPLSANVLTMTVMATR 274
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 5e-21
Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 21/213 (9%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
V DM + + + G D V+ + K++D ++
Sbjct: 73 LSSGTVLHHPADMT--KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED---FPVEQ 127
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ +++ +N + + ++ MK+ G I+ + S G P +AY A I
Sbjct: 128 WDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGL-VA-SPFKSAYVAAKHGIM 184
Query: 124 QLVRTAAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLH 173
L +T A+E+ + + VN I G + Q ++ +++ + P
Sbjct: 185 GLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK 244
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+++ V+ +AS +YL D + +TGT + +DG
Sbjct: 245 KFITVE-QVASLALYLAGDDAAQITGTHVSMDG 276
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 86.4 bits (215), Expect = 1e-20
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86
+ V + + LG+L+ V+ + Q + ++ +K +IN + + + KA +
Sbjct: 113 KDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHL 172
Query: 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146
K+ G I+ SI+ A G Y A +I R+ + + + IRVNG+A G
Sbjct: 173 KQ---GDVIINTASIV-AYEG-NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPG 227
Query: 147 LHLQDEYPI------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
PI + E+ V P+ R +LA +YL S S Y+TG
Sbjct: 228 -------PIWTPLIPSSFDEKKVSQFGSNVPMQR-PGQPYELAPAYVYLASSDSSYVTGQ 279
Query: 201 TIYVDG 206
I+V+G
Sbjct: 280 MIHVNG 285
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 2e-20
Identities = 46/216 (21%), Positives = 78/216 (36%), Gaps = 25/216 (11%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEF 64
G V + D+ + D V + G +D V+ ++D + + F
Sbjct: 78 GARVIFLRADLADLSSHQATVDAVVAE----FGRIDCLVNNAGIASIVRDDFLDLKPENF 133
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKA--GGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+V +N F +AV + M S A SI+ +TS+ P Y A +
Sbjct: 134 DTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSA-VMT-SPERLDYCMSKAGL 191
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHRWL 176
+ A+ + + I V + G I AV + + P+ RW
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPG-------IIRSDMTAAVSGKYDGLIESGLVPMRRWG 244
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+ + D+ + V L + TG+ I DG SI R
Sbjct: 245 EPE-DIGNIVAGLAGGQFGFATGSVIQADGGLSIGR 279
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-20
Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
Query: 60 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPGAAAYGA 117
E ++K ++IN V+ M + G G I+ ++S+ G + Y A
Sbjct: 98 NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG-LMPV-AQQPVYCA 155
Query: 118 CAASIHQLVRTAAM--EIGKHKIRVNGIARG------LHLQDEYPIAVGQERAVKLVREA 169
I R+AA+ + +R+N I G L ++ +++
Sbjct: 156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM 215
Query: 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+ LD +A+ +I LI D + + G + + ++ I
Sbjct: 216 IKYYGILDPP-LIANGLITLIEDDA--LNGAIMKITTSKGIH 254
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 5e-20
Identities = 30/154 (19%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA- 119
++++ + +N + + + M + G IV +T+ + ++ + G + A
Sbjct: 117 QEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLV-DQPM-VGMPSALASLT 173
Query: 120 -ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
++ + R+ AME + +RVN ++ G+ +P + P+ R ++
Sbjct: 174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP-----AETHSTLAGLHPVGRMGEI 228
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
+ D+ V+YL + + ++TG ++VDG Q+ R
Sbjct: 229 R-DVVDAVLYL--EHAGFITGEILHVDGGQNAGR 259
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 6e-20
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 4 SLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQV 59
SL G V++V D+ D + F++A D LG D V+ G + +++
Sbjct: 53 SLVSGAQVDIVAGDIREPGDIDRLFEKARD-----LGGADILVYST---GGPRPGRFMEL 104
Query: 60 GEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA 119
G +++ + ++ + ++ + +M E G +V++ S+ + A
Sbjct: 105 GVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLR--PWQDLALSNIMR 161
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGLH-------LQDEYPIAVGQ--ERAVKLVREAA 170
+ +VRT A+E+ H + VN + L L +E G E A+K +
Sbjct: 162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI 221
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P+ R + +LAS V +L S+ + ++TG I VDG
Sbjct: 222 PMGRVGKPE-ELASVVAFLASEKASFITGAVIPVDG 256
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 7e-20
Identities = 46/240 (19%), Positives = 81/240 (33%), Gaps = 65/240 (27%)
Query: 12 EVVGLDM-----------EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG 60
++VG+D+ E R+ A + + K +D V C G L
Sbjct: 27 QIVGIDIRDAEVIADLSTAEGRKQAIADVLAKC---SKGMDGLVLC---AG-----LGPQ 75
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG----------------- 103
+V +N+ L+ A +K+ + V ++S+
Sbjct: 76 TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAG 134
Query: 104 ---------AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL------- 147
G G AY ++ VR A G+ +R+N IA G
Sbjct: 135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ 194
Query: 148 -HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
LQD + + P+ R + ++AS + +L+S + Y+ G I +DG
Sbjct: 195 AGLQDP-------RYGESIAKFVPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDG 246
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 1e-19
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 30/215 (13%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
V D+ + E F EA+++ G L H + + +
Sbjct: 51 EAEAIAVVADVSDPKAVEAVFAEALEE----FGRLHGVAHFAGVAHSALS---WNLPLEA 103
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
++K++++N + + + G ++E GGS+V S+ G G G A Y A +
Sbjct: 104 WEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAGL--G-AFGLAHYAAGKLGVV 157
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWLDV 178
L RT A+E+ + +RVN + GL I A A + A+PL R
Sbjct: 158 GLARTLALELARKGVRVNVLLPGL-------IQTPMTAGLPPWAWEQEVGASPLGRAGRP 210
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
+ ++A ++L+S+ S Y+TG +YVDG +SI P
Sbjct: 211 E-EVAQAALFLLSEESAYITGQALYVDGGRSIVGP 244
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 82.9 bits (206), Expect = 1e-19
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
D ++K++ +N + + +A +M+ + G ++ + S G P AAY A
Sbjct: 101 LDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF-AG-TPNMAAYVAAKG 158
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAVKLVREAAPLHR 174
+ R A E+GK+ I N + GL I A A V +
Sbjct: 159 GVIGFTRALATELGKYNITANAVTPGL-------IESDGVKASPHNEAFGFVEMLQAMKG 211
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ +A V +L SD +R++TG T+ VD
Sbjct: 212 KGQPE-HIADVVSFLASDDARWITGQTLNVDA 242
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 1e-19
Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 18/153 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ V + +A A ++ G + AY
Sbjct: 103 RGQQPAAVIVGSIAATQPGAAELPMVEAML-AGDEARAIELAEQ---QGQTHLAYAGSKY 158
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLH 173
++ L R ++ +R+N +A G + + R APL
Sbjct: 159 AVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD------PRYGESTRRFVAPLG 212
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R + + ++A + +L+ + ++ G+ ++VDG
Sbjct: 213 RGSEPR-EVAEAIAFLLGPQASFIHGSVLFVDG 244
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 2e-19
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++ +++ +N + ++A + S G ++ +SI G G YPG + YGA A
Sbjct: 140 PEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG-YPGWSHYGASKA 197
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ +RTAA+E+ + VN I G I E + + + P+
Sbjct: 198 AQLGFMRTAAIELAPRGVTVNAILPGN-------ILTEGLVDMGEEYISGMARSIPMGML 250
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+ +L +D + Y+TG I VDG
Sbjct: 251 GSPV-DIGHLAAFLATDEAGYITGQAIVVDG 280
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 4e-19
Identities = 29/214 (13%), Positives = 65/214 (30%), Gaps = 20/214 (9%)
Query: 3 GSLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVH-----CYTYEGKMQD 55
G+ + V + D+ E + + ++ +G +
Sbjct: 54 GAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV 113
Query: 56 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAA 114
E +N + L ++S ++V ++S + A + Y G
Sbjct: 114 ---NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS-LCALQP-YKGWGL 168
Query: 115 YGACAASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAP 171
Y A A+ L + A E + +RV A G +Q +++
Sbjct: 169 YCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS 226
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205
+D A ++ L+ + + +G +
Sbjct: 227 DGALVDC-GTSAQKLLGLLQKDT-FQSGAHVDFY 258
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 1e-18
Identities = 26/190 (13%), Positives = 54/190 (28%), Gaps = 20/190 (10%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
+ A + V++ G +D V+ G +++ V F + I +
Sbjct: 77 GDAVAAAVAKTVEQ----FGGIDICVNNASAINLGSIEE---VPLKRFDLMNGIQVRGTY 129
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ ++ MK I+ L+ I + Y + A E+
Sbjct: 130 AVSQSCIPHMKGRD-NPHILTLSPPIR-LEPKWLRPTPYMMAKYGMTLCALGIAEELRDA 187
Query: 137 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
I N + + L+ + R + A +++ S Y
Sbjct: 188 GIASNTLWPRTTVATAAVQN--------LLGGDEAMARSRKPE-VYADAAYVVLNKPSSY 238
Query: 197 MTGTTIYVDG 206
T + D
Sbjct: 239 TGNTLLCEDV 248
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 1e-18
Identities = 42/199 (21%), Positives = 73/199 (36%), Gaps = 14/199 (7%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G V D+ + F V+K G +D + + ++K
Sbjct: 73 GDDALCVPTDVTDPDSVRALFTATVEK----FGRVDVLFNNAGTGAPAIPMEDLTFAQWK 128
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
++V N P+ + R MK + GG I+ SI P +A Y A +I
Sbjct: 129 QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA--TSPRPYSAPYTATKHAITG 186
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
L ++ +++ H I I G + P+A + V + + +DV +AS
Sbjct: 187 LTKSTSLDGRVHDIACGQIDIGN---ADTPMAQKMKAGVPQADLSIKVEPVMDVA-HVAS 242
Query: 185 TVIYLISD-GSRYMTGTTI 202
V+Y+ S + TI
Sbjct: 243 AVVYMASLPLDANVQFMTI 261
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 2e-18
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++FK+ + F+ +++ MKE G IV +TS + +
Sbjct: 102 NEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS-PI-ENLYTSNSARM 158
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
++ ++T + E+ + I VN +A G + + E K V P+ R +
Sbjct: 159 ALTGFLKTLSFEVAPYGITVNCVAPGWTETERV-KELLSEEKKKQVESQIPMRRMAKPE- 216
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
++AS V +L S+ + Y+TG TI VDG
Sbjct: 217 EIASVVAFLCSEKASYLTGQTIVVDG 242
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 2e-18
Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++ KL ++N ++ L ++ ++M E K G ++F+ S A Y A
Sbjct: 106 DEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIM--PSQEMAHYSATKT 162
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIA-------------RGLHLQDEYPIAVGQERAVKLVR 167
L R+ A + VN I L+ ++ I ++R +K R
Sbjct: 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR 222
Query: 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + R + + ++A V +L S S + G+ + +DG
Sbjct: 223 PTSIIQRLIRPE-EIAHLVTFLSSPLSSAINGSALRIDG 260
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 1e-17
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 22/203 (10%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHC--YTYEGKM--QDPLQVGEDEFKKLVKINFVAPWFL 78
E + A++ A Q+ A V + ++ +D F K + + + +
Sbjct: 88 EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNV 147
Query: 79 LKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
+ V + ++ G++V SI G E G AY A A + L AA ++
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQ--IGQTAYAAAKAGVIGLTIAAARDL 205
Query: 134 GKHKIRVNGIARGLHLQDEYPI-AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
IRVN IA G + PI E A+ P + L ++ A +L+++
Sbjct: 206 SSAGIRVNTIAPGTM---KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN 262
Query: 193 GSRYMTGTTIYVDGAQSITRPRM 215
G Y+ G + +DGAQ R
Sbjct: 263 G--YINGEVMRLDGAQ-----RF 278
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 77.2 bits (191), Expect = 2e-17
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
ED++ K++ +N + + +A + + + GSI+ ++SI+G G G Y A A
Sbjct: 113 EDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-VG-NVGQTNYAASKA 170
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ L +TAA E+G+H IR N + G I ++ V + E P+
Sbjct: 171 GVIGLTQTAARELGRHGIRCNSVLPGF-------IATPMTQKVPQKVVDKITEMIPMGHL 223
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D + D+A V +L S+ S Y+TGT++ V G
Sbjct: 224 GDPE-DVADVVAFLASEDSGYITGTSVEVTG 253
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 2e-17
Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 22/190 (11%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPW 76
E+ A ++A+ K G +D V+ D ++ +N +
Sbjct: 113 EQQISAAVEKAIKK----FGGIDILVNNASAISLTNTLD---TPTKRLDLMMNVNTRGTY 165
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
KA +K+SK I+ ++ + + AY + V A E K
Sbjct: 166 LASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KG 223
Query: 137 KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
+I VN + + +G R+ D+ + Y I +
Sbjct: 224 EIAVNALWPKTAIHTAAMDMLGGPGIESQCRKV-----------DIIADAAYSIFQKPKS 272
Query: 197 MTGTTIYVDG 206
TG + +
Sbjct: 273 FTGNFVIDEN 282
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 4e-17
Identities = 28/203 (13%), Positives = 52/203 (25%), Gaps = 18/203 (8%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ D+ + + K L +D ++ G + D + +
Sbjct: 52 NPKVNITFHTYDVTVPVA-ESKKLLKKIFDQLKTVDILING---AGILDD------HQIE 101
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ + INF A+ + K G G I + S+ G Y A A++
Sbjct: 102 RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG-FNA-IHQVPVYSASKAAVV 159
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
+ A + I G+ V E H +
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSE-QCG 218
Query: 184 STVIYLISDGSRYMTGTTIYVDG 206
+ I G +D
Sbjct: 219 QNFVKAIEANK---NGAIWKLDL 238
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 7e-17
Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACA 119
+ + ++ N + + + V R +AG G IV + S G +G AA Y A
Sbjct: 122 DALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK-QG-VMYAAPYTASK 179
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAA 170
+ ++ E+ K I VN + + V ++ +
Sbjct: 180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI 239
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
PL R+ + ++A V YL++D + +T + V G
Sbjct: 240 PLGRYSTPE-EVAGLVGYLVTDAAASITAQALNVCG 274
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 4e-16
Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 7/147 (4%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ + + +F R M + G IV ++S + Y YG A
Sbjct: 111 ASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ---YMFNVPYGVGKA 166
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK--LVREAAPLHRWLDV 178
+ +L A E+ +H + + G+ + + +E ++ ++++ +
Sbjct: 167 ACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAET 226
Query: 179 KNDLASTVIYLISD-GSRYMTGTTIYV 204
V+ L +D ++G +
Sbjct: 227 TELSGKCVVALATDPNILSLSGKVLPS 253
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 4e-16
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 13/156 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACA 119
++ + +V+ N + + K V + + G G IV + S G +G AA Y A
Sbjct: 120 DELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK-QG-VVHAAPYSASK 177
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIA---------RGLHLQDEYPIAVGQERAVKLVREAA 170
+ + +E+ + I VN + + V E A +
Sbjct: 178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV 237
Query: 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
P+ R++ ++A V YLI G+ +T + V G
Sbjct: 238 PIGRYVQPS-EVAEMVAYLIGPGAAAVTAQALNVCG 272
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 5e-16
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++ ++++N + + KA M+E GSIV S + G G A Y A A
Sbjct: 98 LEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYL--G-NLGQANYAASMA 153
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ L RT A+E+G+ IRVN +A G I A E+ + A PL R
Sbjct: 154 GVVGLTRTLALELGRWGIRVNTLAPGF-------IETRMTAKVPEKVREKAIAATPLGR- 205
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A ++L+SD S ++TG ++VDG
Sbjct: 206 AGKPLEVAYAALFLLSDESSFITGQVLFVDG 236
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 7e-16
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQD-PL-QVGEDEFKKLVKINFVAPWFLLKAVGRR 85
+++ K + +G +DA V G PL ++ ++ + L+
Sbjct: 47 DSIKKMYEQVGKVDAIVSA---TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDS 103
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
+ + GS T I+ A+ ++ ++AA+E+ + IR+N ++
Sbjct: 104 LND---KGSFTLTTGIMM--EDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157
Query: 146 GL 147
+
Sbjct: 158 NV 159
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 8e-16
Identities = 46/228 (20%), Positives = 79/228 (34%), Gaps = 39/228 (17%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE---- 61
++ LD+ EE V +A LD VH + + + +
Sbjct: 55 PAKAPLLELDVQNEEHLASLAGR-VTEAIGAGNKLDGVVHSIGFMPQ--TGMGINPFFDA 111
Query: 62 --DEFKKLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY- 115
+ K + I ++ + + KA+ M GGSIV + R + P Y
Sbjct: 112 PYADVSKGIHISAYSYAS---MAKALLPIMNP---GGSIVGMD--FDPSRAM-PA---YN 159
Query: 116 --GACAASIHQLVRTAAMEIGKHKIRVNGI---------ARGLHLQDEYPIAVGQERAV- 163
+++ + R A E GK+ +R N + + A Q + +
Sbjct: 160 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE 219
Query: 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+ + AP+ + +A TV L+SD TG IY DG
Sbjct: 220 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 9e-16
Identities = 52/219 (23%), Positives = 83/219 (37%), Gaps = 31/219 (14%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDE 63
+ +D++ D ++ + +GN+D H + + +
Sbjct: 82 NQPEAHLYQIDVQSD--EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREG 139
Query: 64 FKKLVKIN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
F I+ + + M E GGSIV T + G E G A
Sbjct: 140 FLLAQDISSYSLTI---VAHEAKKLMPE---GGSIVATTYL-GGEF-AVQNYNVMGVAKA 191
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLH 173
S+ V+ A+++G IRVN I+ G PI VG + K + E APL
Sbjct: 192 SLEANVKYLALDLGPDNIRVNAISAG-------PIRTLSAKGVGGFNTILKEIEERAPLK 244
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
R +D ++ T YL+SD S +TG I+VD +
Sbjct: 245 RNVDQ-VEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK 282
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-15
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 27/206 (13%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHC-------YTYEGKMQDPLQVGEDEFKKLVKINFVAP 75
E A+ A G +D V+C TY K + ++F++++ +N +
Sbjct: 70 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTL--EDFQRVLDVNLMGT 127
Query: 76 WFLLKAVGRRMKESKAG-----GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 130
+ +++ V M +++ G I+ S+ E G G AAY A I + A
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-GQ-VGQAAYSASKGGIVGMTLPIA 185
Query: 131 MEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
++ IRV IA GL P+ E+ + P L + A V +
Sbjct: 186 RDLAPIGIRVMTIAPGLF---GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAI 242
Query: 190 ISDGSRYMTGTTIYVDGAQSITRPRM 215
I + ++ G I +DGA RM
Sbjct: 243 IENP--FLNGEVIRLDGAI-----RM 261
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-15
Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 38/212 (17%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFK 65
G V + D+ D A A + G + +HC G + ++ +
Sbjct: 48 GNAVIGIVADLA--HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGV---YTAEQIR 102
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
++++ N V+ + + R + E GG + + S + + Y A +
Sbjct: 103 RVMESNLVSTILVAQQTVRLIGER--GGVLANVLSSAA--QVGKANESLYCASKWGMRGF 158
Query: 126 VRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+ + E+ +R+ + + P
Sbjct: 159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDA--------------- 203
Query: 179 KNDLASTVIYLI-SDGSRYMTGTTIYVDGAQS 209
A+ ++ + + S ++T I +
Sbjct: 204 ----AAYMLDALEARSSCHVTDLFIGRNEGHH 231
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 5e-15
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 31/212 (14%)
Query: 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVK 69
+ D+ +D D + G LD VH + + + ++ ++
Sbjct: 62 LFRADVTQD--EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE 119
Query: 70 IN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 126
++ VA + + ++E GG IV LT +E+ + P A++ V
Sbjct: 120 VSAYSLVA---VARRAEPLLRE---GGGIVTLT-YYASEK-VVPKYNVMAIAKAALEASV 171
Query: 127 RTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVK 179
R A E+G +RVN I+ G P+ ++ + V + APL R +
Sbjct: 172 RYLAYELGPKGVRVNAISAG-------PVRTVAARSIPGFTKMYDRVAQTAPLRRNITQ- 223
Query: 180 NDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
++ + ++L+S + +TG +YVD I
Sbjct: 224 EEVGNLGLFLLSPLASGITGEVVYVDAGYHIM 255
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 5e-15
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E+ L+ +N AP+ LL+A M +K G I+ ++S+ G AAY A
Sbjct: 128 PAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGK-NP-VADGAAYTASKW 184
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
++ L+ +AA E+ +H++RV+ +A P +V E V L + + L ++
Sbjct: 185 GLNGLMTSAAEELRQHQVRVSLVA---------PGSVRTEFGVGLSAKKSALGA-IEPD- 233
Query: 181 DLASTVIYLISDGSRYMTGTTI 202
D+A V L + + +
Sbjct: 234 DIADVVALLATQADQSFISEVL 255
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 5e-15
Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 34/200 (17%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFLL 79
+ G++D V+ G + + E++F + N +FL
Sbjct: 69 DMADVRRLTTHIVERYGHIDCLVNN---AGVGRFGALSDLTEEDFDYTMNTNLKGTFFLT 125
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+A+ M+ G I F+TS+ + ++ Y LV T + K +R
Sbjct: 126 QALFALMERQH-SGHIFFITSVAA--TKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 140 VNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISD 192
+ + G + DE + + A+ V+
Sbjct: 183 ITDVQPGAVYTPMWGKVDDEMQALMMMPEDI-------------------AAPVVQAYLQ 223
Query: 193 GSRYMTGTTIYVDGAQSITR 212
SR + I + I
Sbjct: 224 PSRTVVEEIILRPTSGDIQD 243
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 5e-15
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ +F K++ IN A + L + ++M + + G I+ ++SI+G G PG A Y A A
Sbjct: 105 DQDFDKVIDINLKANFILNREAIKKMIQKRYG-RIINISSIVGI-AG-NPGQANYCASKA 161
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ + ++ + E+ I VN +A G I E+ + + + PL
Sbjct: 162 GLIGMTKSLSYEVATRGITVNAVAPGF-------IKSDMTDKLNEKQREAIVQKIPLGT- 213
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A V +L S+ + Y+TG T++V+G
Sbjct: 214 YGIPEDVAYAVAFLASNNASYITGQTLHVNG 244
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 6e-15
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E++F+K++ N + + + R M+ +K G ++F+ S+ G G A Y A A
Sbjct: 102 EEKFEKVINANLTGAFRVAQRASRSMQRNKFG-RMIFIGSVSGL-WG-IGNQANYAASKA 158
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ + R+ A E+ K + N +A G I ER + + P R
Sbjct: 159 GVIGMARSIARELSKANVTANVVAPGY-------IDTDMTRALDERIQQGALQFIPAKRV 211
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A V +L S+ + Y++G I VDG
Sbjct: 212 GTPA-EVAGVVSFLASEDASYISGAVIPVDG 241
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 8e-15
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E++F +V+ N + ++K R M +K G +V ++S++G G G A Y A A
Sbjct: 108 EEDFTSVVETNLTGTFRVVKRANRAMLRAKKG-RVVLISSVVGL-LG-SAGQANYAASKA 164
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ R+ A E+G I N +A G + V + + PL R+
Sbjct: 165 GLVGFARSLARELGSRNITFNVVAPGF-------VDTDMTKVLTDEQRANIVSQVPLGRY 217
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+TV +L SD + Y+TG I VDG
Sbjct: 218 ARPE-EIAATVRFLASDDASYITGAVIPVDG 247
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 9e-15
Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPW 76
D ++ + G + HC + K + + L D F I+ A
Sbjct: 71 DAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTA-- 128
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
++KA M E GGSIV LT + G E + P G AS+ V+ A ++GK
Sbjct: 129 -VVKAARPMMTE---GGSIVTLTYL-GGELVM-PNYNVMGVAKASLDASVKYLAADLGKE 182
Query: 137 KIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYL 189
IRVN I+ G PI + ++ K + E APL R ++ T +L
Sbjct: 183 NIRVNSISAG-------PIRTLSAKGISDFNSILKDIEERAPLRRTTTP-EEVGDTAAFL 234
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
SD SR +TG ++VD IT
Sbjct: 235 FSDMSRGITGENLHVDSGFHIT 256
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 9e-15
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPW 76
E+VD ++L G+LD VH + K + + F + I+ F
Sbjct: 92 AESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTY-- 149
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ M GGSI+ L+ GAE+ + P G C A++ V+ A+++GK
Sbjct: 150 -IASKAEPLMTN---GGSILTLSYY-GAEKVV-PHYNVMGVCKAALEASVKYLAVDLGKQ 203
Query: 137 KIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYL 189
+IRVN I+ G P+ + + + +PL R + +D+ +YL
Sbjct: 204 QIRVNAISAG-------PVRTLASSGISDFHYILTWNKYNSPLRRNTTL-DDVGGAALYL 255
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
+SD R TG T++VD +
Sbjct: 256 LSDLGRGTTGETVHVDCGYHVV 277
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 9e-15
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 33/202 (16%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPW 76
++D + L G LD VH + K + + E F + I+ A
Sbjct: 93 AASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTA-- 150
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
+ + + M + GGSI+ LT GAE+ + P G A++ V+ A+++G
Sbjct: 151 -VSRRAEKLMAD---GGSILTLTYY-GAEKVM-PNYNVMGVAKAALEASVKYLAVDLGPQ 204
Query: 137 KIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYL 189
IRVN I+ G PI +G R + K APL R + + +++ +Y
Sbjct: 205 NIRVNAISAG-------PIKTLAASGIGDFRYILKWNEYNAPLRRTVTI-DEVGDVGLYF 256
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
+SD SR +TG + D +
Sbjct: 257 LSDLSRSVTGEVHHADSGYHVI 278
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 9e-15
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ ++ ++ +N A L + + M + G I+ +TSI+G G PG Y A A
Sbjct: 122 DQDWDDVLAVNLTAASTLTRELIHSMMRRRYG-RIINITSIVGV-VG-NPGQTNYCAAKA 178
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ + A EI I VN IA G I E+ + + P+ R
Sbjct: 179 GLIGFSKALAQEIASRNITVNCIAPGF-------IKSAMTDKLNEKQKEAIMAMIPMKR- 230
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + ++A +YL SD + Y+TG T++++G
Sbjct: 231 MGIGEEIAFATVYLASDEAAYLTGQTLHING 261
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 69.4 bits (171), Expect = 1e-14
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
EDE++ ++ N + + + K R M + + G I+ + S++G+ G PG Y A A
Sbjct: 103 EDEWQSVINTNLSSIFRMSKECVRGMMKKRWG-RIISIGSVVGS-AG-NPGQTNYCAAKA 159
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ ++ A E+ I VN +A G I + + P +
Sbjct: 160 GVIGFSKSLAYEVASRNITVNVVAPGF-------IATDMTDKLTDEQKSFIATKIPSGQ- 211
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A+ V +L S+ ++Y+TG T++V+G
Sbjct: 212 IGEPKDIAAAVAFLASEEAKYITGQTLHVNG 242
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-14
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 38/226 (16%)
Query: 13 VVGLDMEEDREGAF------------DEAVDKACQILGNLDAFVHC--YTYEGK---MQD 55
VV LD+ + E AV +A + L A V K +
Sbjct: 29 VVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEG 87
Query: 56 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG-----GSIVFLTSIIGAERGLYP 110
P + + F++++++N + + +L+ M+E+ G IV S+ E G
Sbjct: 88 PHGL--ESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-GQ-I 143
Query: 111 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREA 169
G AAY A + L AA E+ IRV +A GL + P+ G E+A +
Sbjct: 144 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF---DTPLLQGLPEKAKASLAAQ 200
Query: 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215
P L + A+ V++++ + + G + +DGA RM
Sbjct: 201 VPFPPRLGRPEEYAALVLHILENP--MLNGEVVRLDGAL-----RM 239
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 69.4 bits (171), Expect = 1e-14
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV--GE 61
+G V V+G ++ E +A + LG LD V+ G +D L V +
Sbjct: 49 RGSPLVAVLGANLLEAEAATALVHQAAEV----LGGLDTLVNN---AGITRDTLLVRMKD 101
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
++++ +++ N A + + + M +++ G IV +TS++G G PG A Y A A
Sbjct: 102 EDWEAVLEANLSAVFRTTREAVKLMMKARFG-RIVNITSVVGI-LG-NPGQANYVASKAG 158
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRWL 176
+ R A E + I VN +A G I + + + P R+
Sbjct: 159 LIGFTRAVAKEYAQRGITVNAVAPGF-------IETEMTERLPQEVKEAYLKQIPAGRFG 211
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A V +L+S+ + Y+TG T+ VDG
Sbjct: 212 RPE-EVAEAVAFLVSEKAGYITGQTLCVDG 240
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 1e-14
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 18/153 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIV--FLTSIIGAERGLYPGAAAYGAC 118
EDE+ ++++ N A + LLK V M++ G I+ A G + +A+ A
Sbjct: 108 EDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSA-PG-WIYRSAFAAA 164
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLH 173
+ L +T A E ++ I N + G I + A +L P+
Sbjct: 165 KVGLVSLTKTVAYEEAEYGITANMVCPGD-------IIGEMKEATIQEARQLKEHNTPIG 217
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R + D+A T+ +L D S +TGT I V G
Sbjct: 218 RSGTGE-DIARTISFLCEDDSDMITGTIIEVTG 249
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-14
Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 25/204 (12%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHC--YTYEGK---MQDPLQVGEDEFKKLVKINFVAPWF 77
E A+ A Q G++ V+C K P + D F + V +N + +
Sbjct: 65 EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHAL--DSFARTVAVNLIGTFN 122
Query: 78 LLKAVGRRMKESKAG-----GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 132
+++ M + + G IV SI + G G AAY A + L AA E
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-GQ-IGQAAYAASKGGVAALTLPAARE 180
Query: 133 IGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
+ + IRV IA G+ + P+ G + + + P L + A+ V ++
Sbjct: 181 LARFGIRVVTIAPGIF---DTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICE 237
Query: 192 DGSRYMTGTTIYVDGAQSITRPRM 215
+ + G I +DGA RM
Sbjct: 238 NT--MLNGEVIRLDGAL-----RM 254
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 1e-14
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 33/202 (16%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPW 76
+E + G+LD VH + K L+ + F ++I+ +
Sbjct: 68 EEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE-- 125
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
L + + G S++ L+ +G+ + + G A++ VR A+++GKH
Sbjct: 126 -LTNTLKPLLNN---GASVLTLS-YLGSTKYM-AHYNVMGLAKAALESAVRYLAVDLGKH 179
Query: 137 KIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYL 189
IRVN ++ G PI + R + K APL + + + ++ + +YL
Sbjct: 180 HIRVNALSAG-------PIRTLASSGIADFRMILKWNEINAPLRKNVSL-EEVGNAGMYL 231
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
+S S ++G +VD +
Sbjct: 232 LSSLSSGVSGEVHFVDAGYHVM 253
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-14
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 39/213 (18%)
Query: 19 EEDREGAFDEAVDKACQIL----GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKI--- 70
+ G+ + V +A + + G++D VH ++ P L+ + +
Sbjct: 95 NKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSY 154
Query: 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY----GACAASIHQLV 126
+FV+ LL M GG+ + LT I +ER + PG Y + A++
Sbjct: 155 SFVS---LLSHFLPIMNP---GGASISLTYI-ASERII-PG---YGGGMSSAKAALESDT 203
Query: 127 RTAAMEIG-KHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDV 178
R A E G K IRVN I+ G P+ A+G + + AP+ + L
Sbjct: 204 RVLAFEAGRKQNIRVNTISAG-------PLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTA 256
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+++ + +L+S + +TG TIYVD +
Sbjct: 257 -DEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 1e-14
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++++K+N + + + R+M + + G IV ++S++G G G Y A
Sbjct: 106 LLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG-RIVNISSVVGF-TG-NVGQVNYSTTKA 162
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ ++ A E+ + VN +A G I AV E + +E PL R+
Sbjct: 163 GLIGFTKSLAKELAPRNVLVNAVAPGF-------IETDMTAVLSEEIKQKYKEQIPLGRF 215
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+ V++L S+ + Y+TG I+V+G
Sbjct: 216 GSPE-EVANVVLFLCSELASYITGEVIHVNG 245
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-14
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
DE++ +++ N + +++ + + +RM ++ G I+ ++SI+G G G A Y + A
Sbjct: 142 NDEWEDVLRTNLNSLFYITQPISKRMINNRYG-RIINISSIVGL-TG-NVGQANYSSSKA 198
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ ++ A E+ I VN IA G I E+ K + P R
Sbjct: 199 GVIGFTKSLAKELASRNITVNAIAPGF-------ISSDMTDKISEQIKKNIISNIPAGRM 251
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+ +L SD S Y+ G +DG
Sbjct: 252 GTPE-EVANLACFLSSDKSGYINGRVFVIDG 281
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 2e-14
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E+E+ +++ N + + L KAV R M + + G I+ + S++G G G A Y A A
Sbjct: 104 EEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGT-MG-NAGQANYAAAKA 160
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ ++ A E+ + VN +A G I + P R
Sbjct: 161 GVIGFTKSMAREVASRGVTVNTVAPGF-------IETDMTKALNDEQRTATLAQVPAGRL 213
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D + ++AS V +L S + Y+TG T++V+G
Sbjct: 214 GDPR-EIASAVAFLASPEAAYITGETLHVNG 243
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 2e-14
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 35/222 (15%)
Query: 12 EVVGLDMEEDREGAF------DEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEF 64
E V D+++++ A E K Q LGN+D VH ++ P L+ +
Sbjct: 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGY 146
Query: 65 KKLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGACA 119
+FV+ LL+ G M E GGS V L+ + AER + Y G +
Sbjct: 147 LAASSNSAYSFVS---LLQHFGPIMNE---GGSAVTLSYL-AAERVVPGYGGGM--SSAK 197
Query: 120 ASIHQLVRTAAMEIG-KHKIRVNGI---------ARGLHLQDEYPIAVGQERAVKLVREA 169
A++ RT A E G K+ +RVN I A + + + A+
Sbjct: 198 AALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG---KSGEKSFIDYAIDYSYNN 254
Query: 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
APL R L +D+ ++L+S +R ++G T+YVD
Sbjct: 255 APLRRDLHS-DDVGGAALFLLSPLARAVSGVTLYVDNGLHAM 295
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 2e-14
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E E+ ++ N + ++ +M ++G +I+ L+S++GA G PG A Y A A
Sbjct: 103 EQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG-AIINLSSVVGA-VG-NPGQANYVATKA 159
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ L ++AA E+ I VN +A G I + + + PL R+
Sbjct: 160 GVIGLTKSAARELASRGITVNAVAPGF-------IVSDMTDALSDELKEQMLTQIPLARF 212
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A+TV +L SD ++Y+TG TI+V+G
Sbjct: 213 GQDT-DIANTVAFLASDKAKYITGQTIHVNG 242
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 2e-14
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E ++ ++ N + + KAV + M + K+G I+ +TSI G G G A Y A A
Sbjct: 104 EKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG-KIINITSIAGI-IG-NAGQANYAASKA 160
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ ++ A E I N +A G+ I V ++ ++ PL R+
Sbjct: 161 GLIGFTKSIAKEFAAKGIYCNAVAPGI-------IKTDMTDVLPDKVKEMYLNNIPLKRF 213
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ ++A+ V +L SD S Y+TG I +DG
Sbjct: 214 GTPE-EVANVVGFLASDDSNYITGQVINIDG 243
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-14
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 38/205 (18%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTY------EGKMQDPLQVGEDEFKKLVKIN---FV 73
D +D L +LD VH + G D + + F+ I+ F
Sbjct: 76 DAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLD--GLTRENFRIAHDISAYSFP 133
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
A L KA + + S++ L+ +GAER + P G A++ VR A+ +
Sbjct: 134 A---LAKAALPMLSD---DASLLTLS-YLGAERAI-PNYNTMGLAKAALEASVRYLAVSL 185
Query: 134 GKHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTV 186
G +RVN I+ G PI + + V +PL R + + + +
Sbjct: 186 GAKGVRVNAISAG-------PIKTLAASGIKSFGKILDFVESNSPLKRNVTI-EQVGNAG 237
Query: 187 IYLISDGSRYMTGTTIYVDGAQSIT 211
+L+SD + +T ++VD +
Sbjct: 238 AFLLSDLASGVTAEVMHVDSGFNAV 262
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 3e-14
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E+E+ ++ N + KAV R M + G IV + S++G G PG A Y A A
Sbjct: 103 EEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG-RIVNIASVVGV-TG-NPGQANYVAAKA 159
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ L +T+A E+ I VN IA G I V E + + P ++
Sbjct: 160 GVIGLTKTSAKELASRNITVNAIAPGF-------IATDMTDVLDENIKAEMLKLIPAAQF 212
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + D+A+ V + SD S+Y+TG T+ VDG
Sbjct: 213 GEAQ-DIANAVTFFASDQSKYITGQTLNVDG 242
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 3e-14
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 38/205 (18%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTY------EGKMQDPLQVGEDEFKKLVKIN---FV 73
D ++D L D FVH + +G + V + FK I+ FV
Sbjct: 71 DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVN--AVTREGFKIAHDISSYSFV 128
Query: 74 APWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI 133
A + KA + G +++ L+ + GAER + P G AS+ VR A +
Sbjct: 129 A---MAKACRSMLNP---GSALLTLSYL-GAERAI-PNYNVMGLAKASLEANVRYMANAM 180
Query: 134 GKHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTV 186
G +RVN I+ G PI + R + P+ R + + D+ ++
Sbjct: 181 GPEGVRVNAISAG-------PIRTLAASGIKDFRKMLAHCEAVTPIRRTVTI-EDVGNSA 232
Query: 187 IYLISDGSRYMTGTTIYVDGAQSIT 211
+L SD S ++G ++VDG SI
Sbjct: 233 AFLCSDLSAGISGEVVHVDGGFSIA 257
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 3e-14
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 32/202 (15%)
Query: 27 DEAVDKACQIL----GNLDAFVHCYTYEGKMQ---DPLQVGEDEFKKLVKIN---FVAPW 76
DE + + L G+LD VH Y K + + + FK + I+ +A
Sbjct: 83 DEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIA-- 140
Query: 77 FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH 136
L + + M+ G+IV L+ GAE+ + P G A++ VR A +I KH
Sbjct: 141 -LTRELLPLMEGR--NGAIVTLS-YYGAEKVV-PHYNVMGIAKAALESTVRYLAYDIAKH 195
Query: 137 KIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYL 189
R+N I+ G P+ ++ + + + P + + + D+ T ++L
Sbjct: 196 GHRINAISAG-------PVKTLAAYSITGFHLLMEHTTKVNPFGKPITI-EDVGDTAVFL 247
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
SD +R +TG ++VD I
Sbjct: 248 CSDWARAITGEVVHVDNGYHIM 269
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 7e-14
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+DE+ ++ N A + L +AV R M +++ G IV +TS++G+ G PG Y A A
Sbjct: 126 DDEWDAVIDTNLKAVFRLSRAVLRPMMKARGG-RIVNITSVVGS-AG-NPGQVNYAAAKA 182
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ + R A EIG I VN +A G I + ++ PL R
Sbjct: 183 GVAGMTRALAREIGSRGITVNCVAPGF-------IDTDMTKGLPQEQQTALKTQIPLGRL 235
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ D+A V +L S + Y+TGTT++V+G
Sbjct: 236 GSPE-DIAHAVAFLASPQAGYITGTTLHVNG 265
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 8e-14
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 13 VVGLDMEEDREGAF------DEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFK 65
V ++ ++ A E + +G +D VH ++ P LQ +
Sbjct: 101 DVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYL 160
Query: 66 KLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAY----GAC 118
V +FV+ LL+ MKE GGS + L+ I +E+ + PG Y +
Sbjct: 161 AAVSSSSYSFVS---LLQHFLPLMKE---GGSALALS-YIASEKVI-PG---YGGGMSSA 209
Query: 119 AASIHQLVRTAAMEIGK-HKIRVNGI---------ARGLHLQDEYPIAVGQERAVKLVRE 168
A++ RT A E G+ +RVN I A + + + A+
Sbjct: 210 KAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAI---GKAGDKTFIDLAIDYSEA 266
Query: 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
APL + L+ +D+ ++L+S +R +TG T+YVD
Sbjct: 267 NAPLQKELES-DDVGRAALFLLSPLARAVTGATLYVDNGLHAM 308
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 9e-14
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 35/215 (16%)
Query: 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTY------EGKMQDPLQVGEDEFKK 66
V+ D+ D + + ++ LDA VH + EG D V + F
Sbjct: 79 VLPCDVISD--QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFID--CVTREGFSI 134
Query: 67 LVKIN---FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
I+ F A L K MK S+V LT IGAE+ P G AS+
Sbjct: 135 AHDISAYSFAA---LAKEGRSMMKNR--NASMVALT-YIGAEK-AMPSYNTMGVAKASLE 187
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI------AVGQERAV-KLVREAAPLHRWL 176
VR A+ +G+ I+VN ++ G PI + + + +PL + +
Sbjct: 188 ATVRYTALALGEDGIKVNAVSAG-------PIKTLAASGISNFKKMLDYNAMVSPLKKNV 240
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
D+ ++ +TV +L SD + +TG ++VD
Sbjct: 241 DI-MEVGNTVAFLCSDMATGITGEVVHVDAGYHCV 274
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 4e-13
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 5/146 (3%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ ++ +++ + A + + K M E + G IV + S+ G+ RG G A Y + A
Sbjct: 124 KGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG-RIVNIGSVNGS-RG-AFGQANYASAKA 180
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
IH +T A+E K I VN ++ G L AV Q+ + P+ R L +
Sbjct: 181 GIHGFTKTLALETAKRGITVNTVSPGY-LATAMVEAVPQDVLEAKILPQIPVGR-LGRPD 238
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
++A+ + +L SD + ++TG + ++G
Sbjct: 239 EVAALIAFLCSDDAGFVTGADLAING 264
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 6e-13
Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
++++ ++ N + + + K V M E G I+ ++S+ G +G G Y A
Sbjct: 112 REDWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RIINISSVNGQ-KG-QFGQTNYSTAKA 168
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
IH + A E+ + VN ++ G I + ++ + P+ R
Sbjct: 169 GIHGFTMSLAQEVATKGVTVNTVSPGY-------IGTDMVKAIRPDVLEKIVATIPVRR- 220
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L +++ S V +L S+ S + TG ++G
Sbjct: 221 LGSPDEIGSIVAWLASEESGFSTGADFSLNG 251
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 64.4 bits (158), Expect = 8e-13
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ ++ +++ +N + +A + M + + G I+ + S++G G G A Y A A
Sbjct: 100 KSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG-RIINIASVVGL-IG-NIGQANYAAAKA 156
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ +TAA E I VN + G I A E K + PL R
Sbjct: 157 GVIGFSKTAAREGASRNINVNVVCPGF-------IASDMTAKLGEDMEKKILGTIPLGRT 209
Query: 176 LDVKNDLASTVIYL-ISDGSRYMTGTTIYVDG 206
+ ++A V +L +S + Y+TG +DG
Sbjct: 210 GQPE-NVAGLVEFLALSPAASYITGQAFTIDG 240
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-13
Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 16/151 (10%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
E + ++ +N +AP L + + + GG ++ L+S+ G G G Y A
Sbjct: 309 EKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGI-AG-NRGQTNYATTKA 365
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----AVGQERAVKLVREAAPLHRW 175
+ L A + I +N +A G I ++ R L +
Sbjct: 366 GMIGLAEALAPVLADKGITINAVAPGF-------IETKMTEAIPLATREVGRRLNSLFQ- 417
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
D+A + Y S S +TG TI V G
Sbjct: 418 GGQPVDVAELIAYFASPASNAVTGNTIRVCG 448
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 8e-13
Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 25/206 (12%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG-EDEF 64
E + L ++ D + Q G +D V+ D D F
Sbjct: 54 SNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNA---AAMFMDGSLSEPVDNF 110
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+K+++IN +A + +LK V MK K G I + S + + YG+ ++
Sbjct: 111 RKIMEINVIAQYGILKTVTEIMKVQKNG-YIFNVASRAA--KYGFADGGIYGSTKFALLG 167
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKND 181
L + E+ IRV + P V ++A ++ + +D
Sbjct: 168 LAESLYRELAPLGIRVTTLC---------PGWVNTDMAKKAGTPFKDEEMIQ-----PDD 213
Query: 182 LASTVIYLISDGSR-YMTGTTIYVDG 206
L +T+ L++ + +
Sbjct: 214 LLNTIRCLLNLSENVCIKDIVFEMKK 239
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-12
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 40/214 (18%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHC---------YTYEGKMQDPLQVGEDEFKKLVK 69
E A D A +G L V+C + +G F+K+V
Sbjct: 64 EAAVASALDLAET-----MGTLRIVVNCAGTGNAIRVLSRDGVFS------LAAFRKIVD 112
Query: 70 INFVAPWFLLKAVGRRMKESKAG-------GSIVFLTSIIGAERGLYPGAAAYGACAASI 122
IN V + +L+ R+ +++ G I+ S+ + G G AAY A +
Sbjct: 113 INLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD-GQ-IGQAAYSASKGGV 170
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-ERAVKLVREAAPLHRWLDVKND 181
+ A ++ H+IRV IA GL + P+ E A + + P L ++
Sbjct: 171 VGMTLPIARDLASHRIRVMTIAPGLF---DTPLLASLPEEARASLGKQVPHPSRLGNPDE 227
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215
+ +++I + + G I +DGA RM
Sbjct: 228 YGALAVHIIENP--MLNGEVIRLDGAI-----RM 254
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 4e-12
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
D+++ ++ +N + +A + M + ++G I+ + S++G G PG A Y A A
Sbjct: 127 RDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG-RIINIASVVGE-MG-NPGQANYSAAKA 183
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLH 173
+ L +T A E+ I VN +A G L E + E PL
Sbjct: 184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEK------------LLEVIPLG 231
Query: 174 RWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDG 206
R+ + ++A V +L +D + Y+TG I +DG
Sbjct: 232 RYGEAA-EVAGVVRFLAADPAAAYITGQVINIDG 264
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 7e-12
Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 30/198 (15%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDEFKKLVKINFVAPWFL 78
D + A + A + G LD V+ G ++D + E+EF ++ ++ +
Sbjct: 97 DWDQA-AGLIQTAVETFGGLDVLVNN---AGIVRDRMIANTSEEEFDAVIAVHLKGHFAT 152
Query: 79 LKAVGRRMKESKA-----GGSIVFLTSIIGAERGLY--PGAAAYGACAASIHQLVRTAAM 131
++ + G I+ +S G L G Y A A I L A
Sbjct: 153 MRHAAAYWRGLSKAGKAVDGRIINTSSGAG----LQGSVGQGNYSAAKAGIATLTLVGAA 208
Query: 132 EIGKHKIRVNGIARGLHLQDEYPIAVG---QERAVKLVREAAPLHRWLDVKNDLASTVIY 188
E+G++ + VN IA P A + +++ + +N ++ V++
Sbjct: 209 EMGRYGVTVNAIA---------PSARTRMTETVFAEMMATQDQDFDAMAPEN-VSPLVVW 258
Query: 189 LISDGSRYMTGTTIYVDG 206
L S +R +TG V+G
Sbjct: 259 LGSAEARDVTGKVFEVEG 276
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-11
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 23/173 (13%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ-DPLQVGE-DEFKKLVKINFVAPWFL 78
+ + AV + G L A V+ G P+ +E++ ++ N +
Sbjct: 61 EEG-DWARAVAAMEEAFGELSALVNN---AGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
++ + GG+IV + S+ G + + G AAY A + L A +++ + +
Sbjct: 117 IRHAVPALLRRG-GGTIVNVGSLAG--KNPFKGGAAYNASKFGLLGLAGAAMLDLREANV 173
Query: 139 RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
RV + P +V A +A L D+A V++ +
Sbjct: 174 RVVNVL---------PGSVDTGFAGNTPGQAWKLK-----PEDVAQAVLFALE 212
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-11
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGAC 118
E ++K ++ ++ + + KA ++ K G IV +S G LY G A Y +
Sbjct: 112 EKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAG----LYGNFGQANYASA 166
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
+++ T A E K+ I+ N IA P+A + R + + L + L
Sbjct: 167 KSALLGFAETLAKEGAKYNIKANAIA---------PLA--RSRMTESIMPPPMLEK-LGP 214
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ +A V+YL S + +TG V
Sbjct: 215 E-KVAPLVLYLSSAEN-ELTGQFFEVAA 240
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 9e-10
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGAC 118
+ E+ + +++ + + L + E + G I+ +TS G +Y G A Y +
Sbjct: 416 KQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSG----IYGNFGQANYSSS 470
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDV 178
A I L +T A+E K+ I+VN +A P A +
Sbjct: 471 KAGILGLSKTMAIEGAKNNIKVNIVA---------PHAET--AMTLSIMREQDK-NLYHA 518
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
+A ++YL +D +TG T + G
Sbjct: 519 DQ-VAPLLVYLGTDDV-PVTGETFEIGG 544
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 8e-11
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 22/169 (13%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQD-PLQVG-EDEFKKLVKINFVAPWFLLKAVGRR 85
E + L ++D VH +D ++ G E+ + +N + P L + +
Sbjct: 64 EGGVDKLKNLDHVDTLVHA---AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPA 120
Query: 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145
++ A G ++++ S G G +PG Y A ++ L E + IRV+ ++
Sbjct: 121 LRA--ASGCVIYINSGAG--NGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSP 176
Query: 146 GL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLIS 191
G + + R + ++A+ + ++I
Sbjct: 177 GPTNTPMLQGLM-----DSQGTNFRPEIYIE-----PKEIANAIRFVID 215
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 1e-10
Identities = 44/239 (18%), Positives = 78/239 (32%), Gaps = 60/239 (25%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKI---NFVAPWFL 78
++ + Q G ++ VH ++Q L + + + ++ L
Sbjct: 97 NYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLIS---L 153
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEIG-K 135
K MK SI+ LT +++ + Y G + A++ R A +G
Sbjct: 154 CKYFVNIMKP---QSSIISLT-YHASQKVVPGYGGGM--SSAKAALESDTRVLAYHLGRN 207
Query: 136 HKIRVNGI---------ARGL----------------------------------HLQDE 152
+ IR+N I A +
Sbjct: 208 YNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISA 267
Query: 153 YPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+ A++ + APL + L D+ S +L+S SR +TG TIYVD +I
Sbjct: 268 SQNYTFIDYAIEYSEKYAPLRQKLLS-TDIGSVASFLLSRESRAITGQTIYVDNGLNIM 325
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVGE- 61
L V + LD+ DR A AVD + L ++ G DP Q +
Sbjct: 65 LSAKTRVLPLTLDVR-DRA-AMSAAVDNLPEEFATLRGLINN---AGLALGTDPAQSCDL 119
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
D++ +V N + + + R+ AG SIV L S+ A + YPG+ YG A
Sbjct: 120 DDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSV--AGKWPYPGSHVYGGTKAF 177
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL 147
+ Q ++ +RV + GL
Sbjct: 178 VEQFSLNLRCDLQGTGVRVTNLEPGL 203
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-10
Identities = 25/184 (13%), Positives = 53/184 (28%), Gaps = 22/184 (11%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
E ++ A L+ + + + + F+K+ ++ A +
Sbjct: 67 NEDEVTAFLNAADA-HAPLEVTIFNVGANVNFPILE---TTDRVFRKVWEMACWAGFVSG 122
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+ R M G I F + + RG G AA+ + + + ++ A E+ I
Sbjct: 123 RESARLMLAHG-QGKIFFTGAT-ASLRG-GSGFAAFASAKFGLRAVAQSMARELMPKNIH 179
Query: 140 VN-----GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
V +++ G++ P +A L
Sbjct: 180 VAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPP--------AAVAGAYWQLYQQPK 231
Query: 195 RYMT 198
T
Sbjct: 232 SAWT 235
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 6e-10
Identities = 40/206 (19%), Positives = 75/206 (36%), Gaps = 34/206 (16%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--QVGEDE 63
+GG+ V E ++ V A G +D V+ G ++D ++ +++
Sbjct: 65 RGGKAVANYD-----SVEAG-EKLVKTALDTFGRIDVVVNN---AGILRDRSFSRISDED 115
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGACAAS 121
+ + +++ + + +A MK+ + G I+ S G+Y G A Y A
Sbjct: 116 WDIIQRVHLRGSFQVTRAAWDHMKK-QNYGRIIMTAS----ASGIYGNFGQANYSAAKLG 170
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVK-N 180
+ L T +E K+ I N IA P A ++ P +K
Sbjct: 171 LLGLANTLVIEGRKNNIHCNTIA---------PNA-----GSRMTETVMPEDLVEALKPE 216
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDG 206
+A V++L + G V
Sbjct: 217 YVAPLVLWLCHESC-EENGGLFEVGA 241
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-09
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 22 REGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLL 79
D+A ++LG +D G + + D+++ ++ I+ +
Sbjct: 91 HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQ---MNHDDWRWVIDIDLWGSIHAV 147
Query: 80 KAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR 139
+A R+ E GG I F S G G YG + L T A E+ + I
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGL--VPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205
Query: 140 VN 141
V+
Sbjct: 206 VS 207
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-09
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 7/86 (8%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLY--PGAAAYGAC 118
E ++ + ++ + +A MK+ + G I+ +S G+Y G Y A
Sbjct: 123 EQDWNLVNDVHLKGSFKCTQAAFPYMKK-QNYGRIIMTSS----NSGIYGNFGQVNYTAA 177
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIA 144
+ L T A+E ++ + N I
Sbjct: 178 KMGLIGLANTVAIEGARNNVLCNVIV 203
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 9e-09
Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVG-EDEF 64
G + + LD+ +R A +E + N+D V+ G +P +++
Sbjct: 45 GDNLYIAQLDVR-NRA-AIEEMLASLPAEWCNIDILVNN---AGLALGMEPAHKASVEDW 99
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ ++ N ++ +AV M E G I+ + S A Y G YGA A + Q
Sbjct: 100 ETMIDTNNKGLVYMTRAVLPGMVERNHG-HIINIGST--AGSWPYAGGNVYGATKAFVRQ 156
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQERAVKLVREAAPLHRWLDVKND 181
++ +RV I GL E+ +A K + L D
Sbjct: 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL-----TPED 211
Query: 182 LASTVIYLIS 191
++ V ++ +
Sbjct: 212 VSEAVWWVST 221
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 15/146 (10%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLV 68
+ ++ +D+ A+D+ V + + L+ + K V E +
Sbjct: 74 IHILEIDL--RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTL 131
Query: 69 KINFVAPWFLLKAVGRRMKESKA----------GGSIVFLTSIIGA-ERGLYPGAAAYGA 117
+ N V P L KA +K++ +I+ ++SI+G+ + G AY
Sbjct: 132 QTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT 191
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGI 143
++++ ++ ++++ +I +
Sbjct: 192 SKSALNAATKSLSVDLYPQRIMCVSL 217
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 1e-08
Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVG-EDE 63
+ G V LD+ E + +E K + G++D V G L+ E+E
Sbjct: 49 EQGVEVFYHHLDVS-KAE-SVEEFSKKVLERFGDVDVVVAN---AGLGYFKRLEELSEEE 103
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F +++++N + W LKA +K + + TS + A P Y + +
Sbjct: 104 FHEMIEVNLLGVWRTLKAFLDSLKRTGGL--ALVTTSDVSARL--IPYGGGYVSTKWAAR 159
Query: 124 QLVRTAAMEIGKHKIRVNGIARGL 147
L +I +R + G
Sbjct: 160 AL--VRTFQIENPDVRFFELRPGA 181
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 3 GSLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM--QDPLQVG 60
V V LD+ E ++ Q ++D V+ GK D +
Sbjct: 81 DQEFPNAKVHVAQLDIT-QAE-KIKPFIENLPQEFKDIDILVNN---AGKALGSDRVGQI 135
Query: 61 E-DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACA 119
++ + + N A + +AV + +G IV L SI A R YP + Y A
Sbjct: 136 ATEDIQDVFDTNVTALINITQAVLPIFQAKNSG-DIVNLGSI--AGRDAYPTGSIYCASK 192
Query: 120 ASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQERAVKLVREAAPLHRWL 176
++ + E+ KIRV IA GL ++ E+ + +E+A + ++ PL
Sbjct: 193 FAVGAFTDSLRKELINTKIRVILIAPGL-VETEFSLVRYRGNEEQAKNVYKDTTPL---- 247
Query: 177 DVKNDLASTVIYLIS 191
+ +D+A ++Y S
Sbjct: 248 -MADDVADLIVYATS 261
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-08
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 11/146 (7%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE- 61
+L +D+ D+ FD A+ +A +I G DA V+ G M + E
Sbjct: 55 ALNLPN-TLCAQVDVT-DKY-TFDTAITRAEKIYGPADAIVNN---AGMMLLGQIDTQEA 108
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAAS 121
+E++++ +N + ++AV MK G +I+ ++SI A + +P AAY +
Sbjct: 109 NEWQRMFDVNVLGLLNGMQAVLAPMKARNCG-TIINISSI--AGKKTFPDHAAYCGTKFA 165
Query: 122 IHQLVRTAAMEIGKHKIRVNGIARGL 147
+H + E+ +RV IA
Sbjct: 166 VHAISENVREEVAASNVRVMTIAPSA 191
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 3e-08
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 11/136 (8%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEF 64
G + ME D ++ V +A +++G LD + +
Sbjct: 76 GAASAHYIAGTME-DMT-FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFH---DDIHHV 130
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+K +++NF++ L A +K+S GSIV ++S+ G + P AAY A ++
Sbjct: 131 RKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAG-KVAY-PMVAAYSASKFALDG 186
Query: 125 LVRTAAMEIGKHKIRV 140
+ E ++ V
Sbjct: 187 FFSSIRKEYSVSRVNV 202
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 5e-08
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 19/189 (10%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFK 65
G V V+ LD+ DR+ D AV + LG LD V+ G M P++ + ++
Sbjct: 55 GAKVHVLELDVA-DRQ-GVDAAVASTVEALGGLDILVNN---AGIMLLGPVEDADTTDWT 109
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+++ N + ++ +A + SK G++V ++SI A R AA Y A ++
Sbjct: 110 RMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSI--AGRVNVRNAAVYQATKFGVNAF 165
Query: 126 VRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 182
T E+ + +RV I G L+ +E + + + L D+
Sbjct: 166 SETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQ-----AQDI 220
Query: 183 ASTVIYLIS 191
A V Y ++
Sbjct: 221 AEAVRYAVT 229
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 1e-07
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 19/153 (12%)
Query: 27 DEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84
+ + G LD VH +++ G D ++++ + + F+L +
Sbjct: 54 ELEAKALLEEAGPLDLLVHAVGKAGRASVRE---AGRDLVEEMLAAHLLTAAFVL----K 106
Query: 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144
+ K G VF + PG AAY A ++ + A E+ + + + +
Sbjct: 107 HARFQK-GARAVFFGAYPR--YVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVR 163
Query: 145 RGL-------HLQDEYPIAVGQERAVKLVREAA 170
L A+ E A + V E
Sbjct: 164 LPAVATGLWAPLGGPPKGALSPEEAARKVLEGL 196
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDEFKKLV 68
E + LD+ D G +D V+ T G ++ E E + L
Sbjct: 53 AEAISLDV--TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE---TTERELRDLF 107
Query: 69 KINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT 128
+++ P L +A+ +M+E GS+V ++S G + + G +AY A A++ QL
Sbjct: 108 ELHVFGPARLTRALLPQMRERG-SGSVVNISSFGG--QLSFAGFSAYSATKAALEQLSEG 164
Query: 129 AAMEIGKHKIRV 140
A E+ I+V
Sbjct: 165 LADEVAPFGIKV 176
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-07
Identities = 22/154 (14%), Positives = 53/154 (34%), Gaps = 19/154 (12%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEF 64
V V+ L + + + D V K +I+G+ L ++ +
Sbjct: 49 KDSRVHVLPLTV--TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVI 106
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKA----------GGSIVFLTSIIG-----AERGLY 109
+ + +N + L + + +K + + +++ ++S +G
Sbjct: 107 AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQ 166
Query: 110 PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143
AY A+I+ RT A+++ + V
Sbjct: 167 FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNF 200
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-06
Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 18/144 (12%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
V D+ ++ E F++ + VH Y G +Q+ ++
Sbjct: 46 SNNVGYRARDLASHQEVEQLFEQ-------LDSIPSTVVHSAGSGYFGLLQE---QDPEQ 95
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ L++ N + +L+ + +R K+ ++V + S + + Y A ++
Sbjct: 96 IQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMSTAA--QQPKAQESTYCAVKWAVK 151
Query: 124 QLVRTAAMEIGKHKIRVNGIARGL 147
L+ + +E+ +++ + G
Sbjct: 152 GLIESVRLELKGKPMKIIAVYPGG 175
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-06
Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 29/210 (13%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLD-----AFVHCYTYEGKMQDPLQVGE 61
G V V LD+ RE F A D+ G + A V Q +
Sbjct: 57 SGPEVMGVQLDVA-SRE-GFKMAADEVEARFGPVSILCNNAGV------NLFQPIEESSY 108
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYG 116
D++ L+ +N + RM E GG +V S+ Y
Sbjct: 109 DDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLAAGSPGIYN 166
Query: 117 ACAASIHQLVRTAAMEIGKHKIRVN---------GIARGLHLQDEYPIAVGQERAVKLVR 167
++ L + + K++I V+ I ++ + + V
Sbjct: 167 TTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVE 226
Query: 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYM 197
A +H + + + + VI + ++
Sbjct: 227 RLAGVHEFGMEPDVIGARVIEAMKANRLHI 256
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 3e-06
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 20/190 (10%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DE 63
G LD+ DR + A G +D V+ G M PL + DE
Sbjct: 50 DAGGTALAQVLDVT-DRH-SVAAFAQAAVDTWGRIDVLVNN---AGVMPLSPLAAVKVDE 104
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+++++ +N + + AV M+ ++G I+ + SI + P AA Y A ++
Sbjct: 105 WERMIDVNIKGVLWGIGAVLPIMEAQRSG-QIINIGSIGA--LSVVPTAAVYCATKFAVR 161
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYP--IAVGQERAVKLVREAAPLHRWLDVKND 181
+ + + IRV + G+ ++ E I + A A L D
Sbjct: 162 AI--SDGLRQESTNIRVTCVNPGV-VESELAGTITHEETMAAMDTYRAIALQ-----PAD 213
Query: 182 LASTVIYLIS 191
+A V +I
Sbjct: 214 IARAVRQVIE 223
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-05
Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC--YTYEGKMQDPLQVGEDE 63
+ + LD+ + + D A+D+ G +D +H + G + ++
Sbjct: 56 DNDVDLRTLELDV--QSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA---FTPEQ 110
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F +L IN ++ + +A M+ K G +++++S A G P A Y A A++
Sbjct: 111 FAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSA-GGTPPYLAPYFAAKAAMD 168
Query: 124 QLVRTAAMEIGKHKIRV 140
+ A E+ + I
Sbjct: 169 AIAVQYARELSRWGIET 185
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 3e-04
Identities = 39/195 (20%), Positives = 66/195 (33%), Gaps = 31/195 (15%)
Query: 11 VEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM-QDPLQVGE-DEFKK 66
+ D+ EED F + +D ++ G D L G +K
Sbjct: 85 LIPYRCDLSNEEDILSMFSAIRSQ----HSGVDICINN---AGLARPDTLLSGSTSGWKD 137
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAG-GSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+ +N +A + + MKE G I+ + S+ G Y A ++ L
Sbjct: 138 MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTAL 197
Query: 126 VRTAAMEIG--KHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWL 176
E+ + IR I+ G+ L D+ E+A + L
Sbjct: 198 TEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-----DPEKAAATYEQMKCLK--- 249
Query: 177 DVKNDLASTVIYLIS 191
D+A VIY++S
Sbjct: 250 --PEDVAEAVIYVLS 262
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 219 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.98 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.98 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.97 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.97 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.97 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.97 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.97 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.97 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.97 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.97 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.97 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.97 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.97 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.97 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.97 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.97 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.97 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.96 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.96 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.96 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.96 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.96 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.96 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.95 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.95 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.95 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.94 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.94 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.93 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.93 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.93 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.93 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.93 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.93 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.92 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.88 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.86 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.83 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.81 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.75 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.74 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.73 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.72 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.72 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.71 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.7 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.67 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.67 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.66 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.66 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.66 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.64 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.63 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.62 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.61 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.61 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.61 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.61 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.61 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.61 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.6 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.6 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.59 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.59 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.57 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.57 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.57 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.56 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.56 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.56 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.55 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.55 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.55 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.55 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.54 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.52 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.51 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.5 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.5 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.5 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.5 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.49 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.49 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.49 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.49 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.47 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.47 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.47 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.47 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.46 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.46 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.45 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.44 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.44 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.42 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.42 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.41 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.41 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.41 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.4 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.39 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.38 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.38 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.38 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.37 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.37 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.34 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.34 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.32 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.31 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.27 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.26 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.23 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.21 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.2 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.12 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.12 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.08 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.04 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 98.96 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 98.93 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 98.91 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 98.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 98.69 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.54 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 98.49 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 98.44 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 98.22 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 98.2 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.13 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 98.07 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 97.99 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.55 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.01 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 92.12 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 91.89 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 91.58 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 84.48 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 83.57 | |
| 1vjp_A | 394 | MYO-inositol-1-phosphate synthase-related protein; | 81.33 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-48 Score=297.95 Aligned_cols=197 Identities=20% Similarity=0.289 Sum_probs=178.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.++||++|+||||||+.....++.++++++|++++++|+.++++++|+++|+|+
T Consensus 55 g~~~~~~~~Dvt~~--~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 132 (254)
T 4fn4_A 55 GKEVLGVKADVSKK--KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIML 132 (254)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 67899999999999 9999999999999999999999999865567899999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~ 165 (219)
+++ +|+||++||..+.. + .++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++...... +......
T Consensus 133 ~~~-~G~IVnisS~~g~~-~-~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 209 (254)
T 4fn4_A 133 KQG-KGVIVNTASIAGIR-G-GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL 209 (254)
T ss_dssp HHT-CEEEEEECCGGGTC-S-SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHH
T ss_pred HcC-CcEEEEEechhhcC-C-CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHH
Confidence 887 79999999999973 3 68889999999999999999999999999999999999999998655432 2333444
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|++|+++|+ |+|++++||+|+.++++|||++.+|||+++
T Consensus 210 ~~~~~~~~R~g~pe-diA~~v~fLaSd~a~~iTG~~i~VDGG~t~ 253 (254)
T 4fn4_A 210 TKLMSLSSRLAEPE-DIANVIVFLASDEASFVNGDAVVVDGGLTV 253 (254)
T ss_dssp HHHHTTCCCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HhcCCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence 44556889999998 999999999999999999999999999986
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=298.90 Aligned_cols=196 Identities=23% Similarity=0.391 Sum_probs=182.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++.++||++|+ ++++++++++.+++|++|+||||||+. ...++.++++++|++++++|+.++++++|+++|+|+
T Consensus 57 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 133 (255)
T 4g81_D 57 GYDAHGVAFDVTDE--LAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMI 133 (255)
T ss_dssp TCCEEECCCCTTCH--HHHHHHHHHHHHTTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHHCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999986 778999999999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++..+|+||++||..+.. + .+....|+++|+|+.+|+|+++.|++++|||||+|+||++.|++......++...+...
T Consensus 134 ~~~~~G~IVnisS~~~~~-~-~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 211 (255)
T 4g81_D 134 ARNSGGKIINIGSLTSQA-A-RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVK 211 (255)
T ss_dssp HHTCCEEEEEECCGGGTS-B-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHH
T ss_pred HccCCCEEEEEeehhhcC-C-CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHH
Confidence 765479999999999973 3 68899999999999999999999999999999999999999999887766667777777
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++|+++|+ |+|++++||+|+.++++|||++.+|||+.
T Consensus 212 ~~~Pl~R~g~pe-diA~~v~fL~S~~a~~iTG~~i~VDGG~~ 252 (255)
T 4g81_D 212 SSTPSQRWGRPE-ELIGTAIFLSSKASDYINGQIIYVDGGWL 252 (255)
T ss_dssp HHSTTCSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hCCCCCCCcCHH-HHHHHHHHHhCchhCCCcCCEEEECCCeE
Confidence 889999999998 99999999999999999999999999985
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-47 Score=288.44 Aligned_cols=193 Identities=21% Similarity=0.323 Sum_probs=175.1
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++..++||++|+ ++++.+++ +|++|+||||||+. ...++.++++++|++++++|+.++|+++|+++|+|
T Consensus 54 ~g~~~~~~~~Dv~d~--~~v~~~~~-----~g~iDiLVNNAGi~-~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m 125 (247)
T 4hp8_A 54 DGGNASALLIDFADP--LAAKDSFT-----DAGFDILVNNAGII-RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKEL 125 (247)
T ss_dssp TTCCEEEEECCTTST--TTTTTSST-----TTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCCcEEEEEccCCCH--HHHHHHHH-----hCCCCEEEECCCCC-CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356899999999999 88877664 48999999999996 77899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++++|+||++||..+. .+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......++...+..
T Consensus 126 ~~~g~~G~IVnisS~~~~-~g-~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~ 203 (247)
T 4hp8_A 126 LAKGRSGKVVNIASLLSF-QG-GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAI 203 (247)
T ss_dssp HHHTCCEEEEEECCGGGT-SC-CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHH
T ss_pred HHhCCCcEEEEEechhhC-CC-CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHH
Confidence 887557999999999997 33 6888999999999999999999999999999999999999999988766666666666
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..|++|+++|+ |+|.+++||+|+.++++|||++.+|||+..
T Consensus 204 ~~~~PlgR~g~pe-eiA~~v~fLaSd~a~~iTG~~i~VDGG~~A 246 (247)
T 4hp8_A 204 LERIPAGRWGHSE-DIAGAAVFLSSAAADYVHGAILNVDGGWLA 246 (247)
T ss_dssp HTTCTTSSCBCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HhCCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCeEEECccccc
Confidence 6889999999998 999999999999999999999999999863
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=280.82 Aligned_cols=188 Identities=24% Similarity=0.370 Sum_probs=165.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..++||++|+ ++++++++ ++|++|+||||||+. .++.+++.++|++++++|+.++++++|+++|+|+
T Consensus 53 ~~~~~~~~~Dv~~~--~~v~~~~~----~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~ 123 (242)
T 4b79_A 53 HPRIRREELDITDS--QRLQRLFE----ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLA 123 (242)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHH----HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCCCH--HHHHHHHH----hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56789999999999 88777664 579999999999985 3567899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++ +|+||++||..+. .+ .++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......++...+...
T Consensus 124 ~~--~G~IVnisS~~~~-~~-~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~ 199 (242)
T 4b79_A 124 QR--GGSILNIASMYST-FG-SADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIM 199 (242)
T ss_dssp HH--CEEEEEECCGGGT-SC-CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHH
T ss_pred Hc--CCeEEEEeecccc-CC-CCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHH
Confidence 65 5999999999997 33 68899999999999999999999999999999999999999999887666655555566
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
+..|++|+++|+ |+|++++||+|+.++++|||++.+|||+.
T Consensus 200 ~~~PlgR~g~pe-eiA~~v~fLaSd~a~~iTG~~l~VDGG~l 240 (242)
T 4b79_A 200 QRTPLARWGEAP-EVASAAAFLCGPGASFVTGAVLAVDGGYL 240 (242)
T ss_dssp HTCTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCchhcCccCceEEECccHh
Confidence 889999999998 99999999999999999999999999985
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=287.72 Aligned_cols=194 Identities=21% Similarity=0.320 Sum_probs=170.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..++||++|+ ++++++++++.+++|+||+||||||+. ...++.++++++|++.+++|+.++++++|+++|+|+
T Consensus 74 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDiLVNNAG~~-~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~ 150 (273)
T 4fgs_A 74 GGGAVGIQADSANL--AELDRLYEKVKAEAGRIDVLFVNAGGG-SMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLA 150 (273)
T ss_dssp CTTCEEEECCTTCH--HHHHHHHHHHHHHHSCEEEEEECCCCC-CCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred CCCeEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 46788999999999 999999999999999999999999985 788999999999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----hHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~ 162 (219)
+ +|+||++||..+. .+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++...... .+..
T Consensus 151 ~---~G~IInisS~~~~-~~-~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 225 (273)
T 4fgs_A 151 R---GSSVVLTGSTAGS-TG-TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL 225 (273)
T ss_dssp E---EEEEEEECCGGGG-SC-CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHH
T ss_pred h---CCeEEEEeehhhc-cC-CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHH
Confidence 5 5899999999997 33 68899999999999999999999999999999999999999998765432 1223
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 226 ~~~~~~~~PlgR~g~pe-eiA~~v~FLaSd~a~~iTG~~i~VDGG~s~ 272 (273)
T 4fgs_A 226 LNALAAQVPMGRVGRAE-EVAAAALFLASDDSSFVTGAELFVDGGSAQ 272 (273)
T ss_dssp HHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCccCCeEeECcChhh
Confidence 34445778999999998 999999999999999999999999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=282.19 Aligned_cols=198 Identities=21% Similarity=0.328 Sum_probs=170.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.++||++|++|||||+. . ....+.+.++|++.+++|+.++++++|+++|+|+
T Consensus 54 ~~~~~~~~~Dv~~~--~~v~~~v~~~~~~~G~iDiLVNnAGi~-~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 129 (258)
T 4gkb_A 54 QPRATYLPVELQDD--AQCRDAVAQTIATFGRLDGLVNNAGVN-D-GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLK 129 (258)
T ss_dssp CTTCEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-C-CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeecCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-C-CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999985 3 3445789999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~ 163 (219)
++ +|+||++||..+.. + .+....|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++...... .+...
T Consensus 130 ~~--~G~IVnisS~~~~~-~-~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 205 (258)
T 4gkb_A 130 AT--RGAIVNISSKTAVT-G-QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKL 205 (258)
T ss_dssp HH--TCEEEEECCTHHHH-C-CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHH
T ss_pred hc--CCeEEEEeehhhcc-C-CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHH
Confidence 65 59999999999973 3 68899999999999999999999999999999999999999999875432 12222
Q ss_pred HHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 164 KLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 164 ~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
.......|+ +|+++|+ |+|++++||+|+.++++|||++.+|||++-..+.
T Consensus 206 ~~~~~~~plg~R~g~pe-eiA~~v~fLaS~~a~~iTG~~i~VDGG~T~l~~s 256 (258)
T 4gkb_A 206 AEIAAKVPLGRRFTTPD-EIADTAVFLLSPRASHTTGEWLFVDGGYTHLDRA 256 (258)
T ss_dssp HHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTTSCTT
T ss_pred HHHHhcCCCCCCCcCHH-HHHHHHHHHhCchhcCccCCeEEECCCcchhhhh
Confidence 333366788 4889998 9999999999999999999999999999766544
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=272.55 Aligned_cols=187 Identities=22% Similarity=0.261 Sum_probs=168.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..++||++|+ ++++++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.++++++|.+.|+|+
T Consensus 46 ~~~~~~~~~Dv~~~--~~v~~~v~~~~~~~g~iDiLVNNAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~ 122 (247)
T 3ged_A 46 RPNLFYFHGDVADP--LTLKKFVEYAMEKLQRIDVLVNNACRG-SKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELI 122 (247)
T ss_dssp CTTEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 56789999999999 999999999999999999999999985 778999999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++ +|+||++||..+. .+ .+....|+++|+|+.+|+|+++.|+++ |||||+|+||+++|++..+... ...
T Consensus 123 ~~--~G~IInisS~~~~-~~-~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~------~~~ 191 (247)
T 3ged_A 123 KN--KGRIINIASTRAF-QS-EPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ------EDC 191 (247)
T ss_dssp HT--TCEEEEECCGGGT-SC-CTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH------HHH
T ss_pred hc--CCcEEEEeecccc-cC-CCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH------HHH
Confidence 75 4999999999997 33 688999999999999999999999997 9999999999999998765432 122
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++|+++|+ |+|++++||+| ++++|||++.+|||++..
T Consensus 192 ~~~Pl~R~g~pe-diA~~v~fL~s--~~~iTG~~i~VDGG~s~r 232 (247)
T 3ged_A 192 AAIPAGKVGTPK-DISNMVLFLCQ--QDFITGETIIVDGGMSKR 232 (247)
T ss_dssp HTSTTSSCBCHH-HHHHHHHHHHH--CSSCCSCEEEESTTGGGC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHHh--CCCCCCCeEEECcCHHHh
Confidence 678999999998 99999999998 469999999999999764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=275.21 Aligned_cols=198 Identities=19% Similarity=0.201 Sum_probs=170.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
..+...++||++++ ++++++++++.+++|++|++|||||+.. ...++.+++.++|++.+++|+.++++++|+++|+|
T Consensus 49 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m 126 (261)
T 4h15_A 49 LPEELFVEADLTTK--EGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDM 126 (261)
T ss_dssp SCTTTEEECCTTSH--HHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhh
Confidence 34556899999999 9999999999999999999999999753 24578899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--------
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------- 158 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------- 158 (219)
++++ +|+||++||..+..+. ......|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......
T Consensus 127 ~~~~-~G~Iv~isS~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~ 204 (261)
T 4h15_A 127 VARG-SGVVVHVTSIQRVLPL-PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGT 204 (261)
T ss_dssp HHHT-CEEEEEECCGGGTSCC-TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTC
T ss_pred hhcC-CceEEEEEehhhccCC-CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhcc
Confidence 9887 7999999999987332 23578999999999999999999999999999999999999997654321
Q ss_pred -hH---HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 -QE---RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 -~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+ ..........|++|+++|+ |||++++||+|+.++++|||+|.+|||+..
T Consensus 205 ~~~~~~~~~~~~~~~~PlgR~g~pe-evA~~v~fLaS~~a~~itG~~i~VDGG~v~ 259 (261)
T 4h15_A 205 DLEGGKKIIMDGLGGIPLGRPAKPE-EVANLIAFLASDRAASITGAEYTIDGGTVP 259 (261)
T ss_dssp CHHHHHHHHHHHTTCCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred chhhHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCchhcCccCcEEEECCcCcc
Confidence 11 1112223567999999998 999999999999999999999999999843
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=272.98 Aligned_cols=197 Identities=24% Similarity=0.289 Sum_probs=177.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
++.++++++||++|+ ++++++++++.+++|++|++|||||+.. ...++.+.++++|+..+++|+.+++.+++.+.
T Consensus 56 ~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T 4fs3_A 56 NQPEAHLYQIDVQSD--EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAK 133 (256)
T ss_dssp TCSSCEEEECCTTCH--HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999 9999999999999999999999999753 23466788999999999999999999999998
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
+++++ +|+||++||..+... .+++..|+++|+|+.+|+|+++.|++++|||||+|+||++.|++.......+...
T Consensus 134 ~~~~~---~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~ 208 (256)
T 4fs3_A 134 KLMPE---GGSIVATTYLGGEFA--VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTIL 208 (256)
T ss_dssp TTCTT---CEEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHH
T ss_pred HHhcc---CCEEEEEeccccccC--cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHH
Confidence 87654 699999999999733 6889999999999999999999999999999999999999999987766656666
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+......|++|+++|+ |||++++||+|+.++++|||+|.+|||++..
T Consensus 209 ~~~~~~~Pl~R~g~pe-evA~~v~fL~Sd~a~~iTG~~i~VDGG~~av 255 (256)
T 4fs3_A 209 KEIKERAPLKRNVDQV-EVGKTAAYLLSDLSSGVTGENIHVDSGFHAI 255 (256)
T ss_dssp HHHHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCccCCEEEECcCHHhc
Confidence 6666889999999998 9999999999999999999999999999865
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=258.76 Aligned_cols=201 Identities=24% Similarity=0.354 Sum_probs=181.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|+|+
T Consensus 53 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 129 (258)
T 3oid_A 53 GVKVLVVKANVGQP--AKIKEMFQQIDETFGRLDVFVNNAASG-VLRPVMELEETHWDWTMNINAKALLFCAQEAAKLME 129 (258)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999985 667888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.......
T Consensus 130 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 206 (258)
T 3oid_A 130 KNG-GGHIVSISSLGSIRY--LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDAR 206 (258)
T ss_dssp TTT-CEEEEEEEEGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHH
T ss_pred hcC-CcEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHH
Confidence 876 799999999998733 68899999999999999999999999999999999999999999877655444455555
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
...|++++.+|+ |+|++++||+|+.++++||+++.+|||++...++.
T Consensus 207 ~~~p~~r~~~~~-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~ 253 (258)
T 3oid_A 207 QNTPAGRMVEIK-DMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLEH 253 (258)
T ss_dssp HHCTTSSCBCHH-HHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC--
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCcccCCccCCEEEECCCccCCCCCC
Confidence 778999999998 99999999999999999999999999999887554
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=257.62 Aligned_cols=197 Identities=26% Similarity=0.397 Sum_probs=177.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 69 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 145 (266)
T 4egf_A 69 GTDVHTVAIDLAEP--DAPAELARRAAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMV 145 (266)
T ss_dssp CCCEEEEECCTTST--THHHHHHHHHHHHHTSCSEEEEECCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56799999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.......
T Consensus 146 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 223 (266)
T 4egf_A 146 AAGEGGAIITVASAAALAP--LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMI 223 (266)
T ss_dssp HHTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHH
T ss_pred hcCCCeEEEEEcchhhccC--CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHH
Confidence 8654689999999998733 68889999999999999999999999999999999999999998766544444444445
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.++++||++|.+|||+.+
T Consensus 224 ~~~p~~r~~~p~-dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 224 ARIPLGRFAVPH-EVSDAVVWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence 778999999998 999999999999999999999999999875
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=256.33 Aligned_cols=197 Identities=22% Similarity=0.351 Sum_probs=178.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 74 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 150 (271)
T 4ibo_A 74 GHDAEAVAFDVTSE--SEIIEAFARLDEQGIDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMI 150 (271)
T ss_dssp TCCEEECCCCTTCH--HHHHHHHHHHHHHTCCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHCCCCCEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.......
T Consensus 151 ~~~-~g~iV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 227 (271)
T 4ibo_A 151 PRG-YGKIVNIGSLTSELA--RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVK 227 (271)
T ss_dssp HHT-CEEEEEECCGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHH
T ss_pred hcC-CcEEEEEccHHhCCC--CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHH
Confidence 876 799999999998733 68889999999999999999999999999999999999999998776544444455555
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++++|+ |+|++++||+++.++++||+++.+|||+...
T Consensus 228 ~~~p~~r~~~pe-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 228 ARTPAKRWGKPQ-ELVGTAVFLSASASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp HHSTTCSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence 778999999998 9999999999999999999999999998753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-40 Score=255.23 Aligned_cols=198 Identities=20% Similarity=0.262 Sum_probs=174.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++.+++||++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++.+++|+.+++++++.++|+|
T Consensus 57 ~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 133 (265)
T 3lf2_A 57 PGARLFASVCDVLDA--LQVRAFAEACERTLGCASILVNNAGQG-RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQL 133 (265)
T ss_dssp TTCCEEEEECCTTCH--HHHHHHHHHHHHHHCSCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344699999999999 999999999999999999999999985 67888999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--------
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------- 158 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------- 158 (219)
++++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||+++|++......
T Consensus 134 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~ 210 (265)
T 3lf2_A 134 ESRA-DAAIVCVNSLLASQP--EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELD 210 (265)
T ss_dssp TTST-TEEEEEEEEGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------C
T ss_pred hccC-CeEEEEECCcccCCC--CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccC
Confidence 8876 799999999999733 68899999999999999999999999999999999999999997654332
Q ss_pred hHHHHHHHHh--hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVRE--AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+........ ..|++++++|+ |+|++++||+|+.++++||+++.+|||++..
T Consensus 211 ~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~ 264 (265)
T 3lf2_A 211 WAQWTAQLARNKQIPLGRLGKPI-EAARAILFLASPLSAYTTGSHIDVSGGLSRH 264 (265)
T ss_dssp HHHHHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred HHHHHHHHhhccCCCcCCCcCHH-HHHHHHHHHhCchhcCcCCCEEEECCCCcCC
Confidence 1222222222 27999999998 9999999999999999999999999998753
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=259.16 Aligned_cols=200 Identities=25% Similarity=0.367 Sum_probs=173.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 76 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 153 (283)
T 3v8b_A 76 GGQAIALEADVSDE--LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLK 153 (283)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 9999999999999999999999999865568899999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH-----
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA----- 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----- 162 (219)
+++ .|+||++||..+....+.++...|+++|+|+++|+++++.|++++|||+|+|+||+++|++..........
T Consensus 154 ~~~-~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 232 (283)
T 3v8b_A 154 QRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIP 232 (283)
T ss_dssp HHT-CEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCC
T ss_pred HcC-CceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhh
Confidence 876 79999999998864223578899999999999999999999999999999999999999987654221111
Q ss_pred HHHHHhhcCC--CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPL--HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........|+ ++++.|+ |+|++++||+|+.++++||+++.+|||+++.
T Consensus 233 ~~~~~~~~p~~~~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~ 282 (283)
T 3v8b_A 233 VEWPKGQVPITDGQPGRSE-DVAELIRFLVSERARHVTGSPVWIDGGQGLL 282 (283)
T ss_dssp CBCTTCSCGGGTTCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred hhhhhhcCccccCCCCCHH-HHHHHHHHHcCccccCCcCCEEEECcCcccc
Confidence 0111133455 7888888 9999999999999999999999999998754
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=253.21 Aligned_cols=195 Identities=21% Similarity=0.355 Sum_probs=175.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|++|||||.. ...++ +.+.++|++++++|+.++++++++++|+|+
T Consensus 60 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 135 (256)
T 3gaf_A 60 GGKAIGLECNVTDE--QHREAVIKAALDQFGKITVLVNNAGGG-GPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQ 135 (256)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999986 45666 889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.. ....
T Consensus 136 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~-~~~~ 211 (256)
T 3gaf_A 136 KAG-GGAILNISSMAGENT--NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIE-RAML 211 (256)
T ss_dssp HTT-CEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHH-HHHH
T ss_pred hcC-CcEEEEEcCHHHcCC--CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHH-HHHH
Confidence 876 799999999999733 688899999999999999999999999999999999999999987665443333 3344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|++++||+++.++++||+++++|||+...
T Consensus 212 ~~~p~~r~~~~~-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~ 254 (256)
T 3gaf_A 212 KHTPLGRLGEAQ-DIANAALFLCSPAAAWISGQVLTVSGGGVQE 254 (256)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence 778999999998 9999999999999999999999999998754
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=254.93 Aligned_cols=203 Identities=24% Similarity=0.391 Sum_probs=178.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ ++++++++++.+++|++|++|||||+.....++.+.+.++|++.+++|+.+++.+++.++|+|+
T Consensus 56 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 133 (280)
T 3tox_A 56 GGEAAALAGDVGDE--ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIA 133 (280)
T ss_dssp TCCEEECCCCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 9999999999999999999999999865667888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--chHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--GQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~ 165 (219)
+++ .|+||++||..+...+ .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... ..+.....
T Consensus 134 ~~~-~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~ 211 (280)
T 3tox_A 134 ALG-GGSLTFTSSFVGHTAG-FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF 211 (280)
T ss_dssp HTT-CEEEEEECCSBTTTBC-CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH
T ss_pred HcC-CCEEEEEcChhhCcCC-CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHH
Confidence 876 7999999999886222 6788999999999999999999999999999999999999999876522 12233344
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
.....|++++.+|+ |+|++++||+++.++++||++|.+|||+++..+-+
T Consensus 212 ~~~~~p~~r~~~pe-dvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~a~ 260 (280)
T 3tox_A 212 VEGLHALKRIARPE-EIAEAALYLASDGASFVTGAALLADGGASVTKAAE 260 (280)
T ss_dssp HHTTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC---
T ss_pred HhccCccCCCcCHH-HHHHHHHHHhCccccCCcCcEEEECCCcccccccc
Confidence 44678899999998 99999999999999999999999999998876443
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=251.16 Aligned_cols=193 Identities=23% Similarity=0.348 Sum_probs=173.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|++
T Consensus 55 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~ 131 (248)
T 3op4_A 55 DNGKGMALNVTNP--ESIEAVLKAITDEFGGVDILVNNAGIT-RDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMK 131 (248)
T ss_dssp GGEEEEECCTTCH--HHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3578899999999 999999999999999999999999986 6678889999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... .+. ......
T Consensus 132 ~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~-~~~~~~ 206 (248)
T 3op4_A 132 KR-QGRIINVGSVVGTMG--NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN-DEQ-RTATLA 206 (248)
T ss_dssp HT-CEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC-HHH-HHHHHH
T ss_pred cC-CCEEEEEcchhhcCC--CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC-HHH-HHHHHh
Confidence 76 799999999998743 5889999999999999999999999999999999999999999876542 222 233346
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..|.+++.+|+ |+|++++||+++.++++||+++.+|||+++
T Consensus 207 ~~p~~r~~~p~-dva~~v~~L~s~~~~~itG~~i~vdgG~~~ 247 (248)
T 3op4_A 207 QVPAGRLGDPR-EIASAVAFLASPEAAYITGETLHVNGGMYM 247 (248)
T ss_dssp TCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred cCCCCCCcCHH-HHHHHHHHHcCCccCCccCcEEEECCCeec
Confidence 78899999998 999999999999999999999999999875
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=251.87 Aligned_cols=196 Identities=24% Similarity=0.350 Sum_probs=176.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|++
T Consensus 60 ~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 136 (262)
T 3pk0_A 60 GKVIGVQTDVSDR--AQCDALAGRAVEEFGGIDVVCANAGVF-PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIA 136 (262)
T ss_dssp SCEEEEECCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 6899999999999 999999999999999999999999986 6688899999999999999999999999999999998
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+...+ .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... +........
T Consensus 137 ~~-~g~iv~isS~~~~~~~-~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~ 212 (262)
T 3pk0_A 137 SG-SGRVVLTSSITGPITG-YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG--EEYIASMAR 212 (262)
T ss_dssp HS-SCEEEEECCSBTTTBC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC--HHHHHHHHT
T ss_pred cC-CcEEEEEechhhccCC-CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC--HHHHHHHHh
Confidence 76 7999999999885233 6888999999999999999999999999999999999999999765432 223334447
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|++++.+|+ |+|++++||+++.++++||+++.+|||+.+..
T Consensus 213 ~~p~~r~~~p~-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 255 (262)
T 3pk0_A 213 SIPAGALGTPE-DIGHLAAFLATKEAGYITGQAIAVDGGQVLPE 255 (262)
T ss_dssp TSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTCCS
T ss_pred cCCCCCCcCHH-HHHHHHHHHhCccccCCcCCEEEECCCeecCc
Confidence 78999999998 99999999999999999999999999998864
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=249.47 Aligned_cols=194 Identities=25% Similarity=0.396 Sum_probs=175.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 53 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 129 (246)
T 3osu_A 53 GVDSFAIQANVADA--DEVKAMIKEVVSQFGSLDVLVNNAGIT-RDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQML 129 (246)
T ss_dssp TSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++..... . ...+...
T Consensus 130 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~-~~~~~~~ 204 (246)
T 3osu_A 130 RQR-SGAIINLSSVVGAVG--NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS-D-ELKEQML 204 (246)
T ss_dssp HHT-CEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-H-HHHHHHH
T ss_pred HcC-CCEEEEEcchhhcCC--CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC-H-HHHHHHH
Confidence 876 799999999988743 5888999999999999999999999999999999999999999876542 2 2333344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++++|+ |+|++++||+++.++++||+++++|||+.+
T Consensus 205 ~~~p~~r~~~~~-dva~~v~~l~s~~~~~itG~~i~vdgG~~~ 246 (246)
T 3osu_A 205 TQIPLARFGQDT-DIANTVAFLASDKAKYITGQTIHVNGGMYM 246 (246)
T ss_dssp TTCTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTSCC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence 678999999998 999999999999999999999999999864
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=253.52 Aligned_cols=197 Identities=25% Similarity=0.429 Sum_probs=170.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 75 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (286)
T 3uve_A 75 NRRIVTAEVDVRDY--DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMI 152 (286)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56799999999999 9999999999999999999999999864434588899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------- 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------- 157 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.....
T Consensus 153 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 230 (286)
T 3uve_A 153 AGGRGGSIILTSSVGGLKA--YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLE 230 (286)
T ss_dssp HHTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSS
T ss_pred hCCCCcEEEEECchhhccC--CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcccccc
Confidence 8654689999999999733 6888999999999999999999999999999999999999999875321
Q ss_pred --chHHHHHH--HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 --GQERAVKL--VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 --~~~~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........ .....| +++.+|+ |+|++++||+|+.++++||++|.+|||+++
T Consensus 231 ~~~~~~~~~~~~~~~~~p-~r~~~p~-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 231 NPGPDDMAPICQMFHTLP-IPWVEPI-DISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp SCCHHHHHHHHHTTCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ccchhhHHHHHHhhhccC-CCcCCHH-HHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 01111111 223345 7888887 999999999999999999999999999875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=250.99 Aligned_cols=195 Identities=21% Similarity=0.335 Sum_probs=173.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++. +..+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 78 ~~~~~~~~~Dv~d~--~~v~~~~-~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 153 (273)
T 3uf0_A 78 GGSAEAVVADLADL--EGAANVA-EELAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAML 153 (273)
T ss_dssp TCEEEEEECCTTCH--HHHHHHH-HHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHH-HHHHhcCCCcEEEECCCCC-CCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 9999994 4456679999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.......
T Consensus 154 ~~~-~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 230 (273)
T 3uf0_A 154 AHG-SGRIVTIASMLSFQG--GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEIT 230 (273)
T ss_dssp HHT-CEEEEEECCGGGTSC--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHH
T ss_pred hcC-CCEEEEEcchHhcCC--CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHH
Confidence 876 799999999999733 57889999999999999999999999999999999999999998776544444444455
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.++++||+++.+|||+.+
T Consensus 231 ~~~p~~r~~~pe-dva~~v~~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 231 ARIPAGRWATPE-DMVGPAVFLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp HHSTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence 778999999998 999999999999999999999999999865
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-39 Score=250.74 Aligned_cols=196 Identities=24% Similarity=0.343 Sum_probs=174.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 80 ~~~~~~~~~Dl~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 156 (276)
T 3r1i_A 80 GGKALPIRCDVTQP--DQVRGMLDQMTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMV 156 (276)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+|+||++||..+......++...|+++|+|+++|+++++.|++++|||+|+|+||+|+|++...... ......
T Consensus 157 ~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~ 233 (276)
T 3r1i_A 157 DQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD---YHALWE 233 (276)
T ss_dssp HHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG---GHHHHG
T ss_pred HcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH---HHHHHH
Confidence 87645899999999887433224678999999999999999999999999999999999999999876432 223344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.++++||+++.+|||++.
T Consensus 234 ~~~p~~r~~~pe-dvA~~v~fL~s~~~~~itG~~i~vdGG~~~ 275 (276)
T 3r1i_A 234 PKIPLGRMGRPE-ELTGLYLYLASAASSYMTGSDIVIDGGYTC 275 (276)
T ss_dssp GGSTTSSCBCGG-GSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCccCcEEEECcCccC
Confidence 678999999998 999999999999999999999999999864
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=252.94 Aligned_cols=197 Identities=27% Similarity=0.402 Sum_probs=178.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|++
T Consensus 63 ~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 140 (281)
T 3svt_A 63 GAIRYEPTDITNE--DETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVR 140 (281)
T ss_dssp CEEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 3789999999999 99999999999999999999999998546678889999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ +|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++................
T Consensus 141 ~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~ 217 (281)
T 3svt_A 141 GG-GGSFVGISSIAASNT--HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAM 217 (281)
T ss_dssp TT-CEEEEEECCHHHHSC--CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHH
T ss_pred cC-CcEEEEEeCHHHcCC--CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHh
Confidence 76 799999999998733 578899999999999999999999999999999999999999988765444444444557
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..|++++++|+ |+|++++||+++.++++||+++.+|||+.+.
T Consensus 218 ~~p~~r~~~~~-dva~~~~~l~s~~~~~itG~~~~vdgG~~~~ 259 (281)
T 3svt_A 218 CTPLPRQGEVE-DVANMAMFLLSDAASFVTGQVINVDGGQMLR 259 (281)
T ss_dssp HCSSSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred cCCCCCCCCHH-HHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence 78999999998 9999999999999999999999999999887
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=248.76 Aligned_cols=197 Identities=27% Similarity=0.408 Sum_probs=174.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|.|+
T Consensus 53 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 129 (259)
T 4e6p_A 53 GPAAYAVQMDVTRQ--DSIDAAIAATVEHAGGLDILVNNAALF-DLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMI 129 (259)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHSSSCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCceEEEeeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34678999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---------c
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------G 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------~ 158 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++..... .
T Consensus 130 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 207 (259)
T 4e6p_A 130 AQGRGGKIINMASQAGRRG--EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRP 207 (259)
T ss_dssp HHTSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCC
T ss_pred hcCCCeEEEEECChhhccC--CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCC
Confidence 7654689999999999733 6788999999999999999999999999999999999999999865431 1
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
............|++++.+|+ |+|++++||+++.++++||+++++|||+.+
T Consensus 208 ~~~~~~~~~~~~p~~r~~~~~-dva~~v~~L~s~~~~~itG~~i~vdgG~~~ 258 (259)
T 4e6p_A 208 RGEKKRLVGEAVPFGRMGTAE-DLTGMAIFLASAESDYIVSQTYNVDGGNWM 258 (259)
T ss_dssp TTHHHHHHHHHSTTSSCBCTH-HHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred hHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence 122233344678999999998 999999999999999999999999999875
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=251.12 Aligned_cols=196 Identities=21% Similarity=0.326 Sum_probs=173.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 51 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 127 (247)
T 3rwb_A 51 GKKARAIAADISDP--GSVKALFAEIQALTGGIDILVNNASIV-PFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMR 127 (247)
T ss_dssp CTTEEECCCCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 677888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++..|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||+|+|+||++.|++....... .......
T Consensus 128 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~ 204 (247)
T 3rwb_A 128 AAGKAGRVISIASNTFFAG--TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVE 204 (247)
T ss_dssp HHTCCEEEEEECCTHHHHT--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHH
T ss_pred HcCCCcEEEEECchhhccC--CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHh
Confidence 8754689999999998733 688999999999999999999999999999999999999999876543322 2222332
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+++++.+|+ |+|+++.||+++.++++||+++.+|||+..
T Consensus 205 ~~~~~~r~~~pe-dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 246 (247)
T 3rwb_A 205 MLQAMKGKGQPE-HIADVVSFLASDDARWITGQTLNVDAGMVR 246 (247)
T ss_dssp HHSSSCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred cccccCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 347889999998 999999999999999999999999999863
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=251.17 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=172.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 67 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 143 (270)
T 3is3_A 67 GSDAIAIKADIRQV--PEIVKLFDQAVAHFGHLDIAVSNSGVV-SFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT 143 (270)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 56789999999999 999999999999999999999999986 678888999999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc----------c
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------V 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----------~ 157 (219)
+ +|+||++||..+...+ .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.... .
T Consensus 144 ~---~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 219 (270)
T 3is3_A 144 E---GGRIVLTSSNTSKDFS-VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSY 219 (270)
T ss_dssp T---TCEEEEECCTTTTTCC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGS
T ss_pred c---CCeEEEEeCchhccCC-CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhcccccccc
Confidence 5 5899999998843222 678899999999999999999999999999999999999999987531 1
Q ss_pred chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 158 GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
..+..........|++++++|+ |+|++++||+++.++++||+++.+|||+.
T Consensus 220 ~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 270 (270)
T 3is3_A 220 TAEQRQQMAAHASPLHRNGWPQ-DVANVVGFLVSKEGEWVNGKVLTLDGGAA 270 (270)
T ss_dssp CHHHHHHHHHHHSTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred chHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence 2334444555778999999998 99999999999999999999999999974
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=251.22 Aligned_cols=196 Identities=19% Similarity=0.282 Sum_probs=175.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 59 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 136 (264)
T 3ucx_A 59 GRRALSVGTDITDD--AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALE 136 (264)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 9999999999999999999999999865668888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
++ +|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||+|+|+||++.|++......
T Consensus 137 ~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 212 (264)
T 3ucx_A 137 ES--KGAVVNVNSMVVRHS--QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTS 212 (264)
T ss_dssp HH--TCEEEEECCGGGGCC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCC
T ss_pred Hc--CCEEEEECcchhccC--CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCC
Confidence 76 499999999998733 68889999999999999999999999999999999999999998665422
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..........|++++.+|+ |+|++++||+|+.++++||+++.+|||+++
T Consensus 213 ~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 213 VEDIYNAAAAGSDLKRLPTED-EVASAILFMASDLASGITGQALDVNCGEYK 263 (264)
T ss_dssp HHHHHHHHHTTSSSSSCCBHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHHHhccCCcccCCCHH-HHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 123334444678999999998 999999999999999999999999999875
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=252.49 Aligned_cols=197 Identities=24% Similarity=0.392 Sum_probs=169.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+.+|++|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 88 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 165 (299)
T 3t7c_A 88 GRRIIASQVDVRDF--DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIM 165 (299)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56799999999999 9999999999999999999999999864444588999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++..|+||++||..+... .++...|+++|+|+++|+++++.|++++||+||+|+||+|.|++......
T Consensus 166 ~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 243 (299)
T 3t7c_A 166 AGKRGGSIVFTSSIGGLRG--AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLE 243 (299)
T ss_dssp HTTSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSS
T ss_pred hcCCCcEEEEECChhhccC--CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhc
Confidence 7654689999999999733 68889999999999999999999999999999999999999998753210
Q ss_pred ---hHHHH--HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 ---QERAV--KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ---~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..... .......| +++.+|+ |+|++++||+|+.++++||++|.+|||+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~p-~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 244 NPTVEDFQVASRQMHVLP-IPYVEPA-DISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp SCCHHHHHHHHHHHSSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cchhhHHHHHhhhhcccC-cCCCCHH-HHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 11111 11223344 6778887 999999999999999999999999999875
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=251.94 Aligned_cols=194 Identities=22% Similarity=0.339 Sum_probs=165.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 72 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (266)
T 3grp_A 72 GKDVFVFSANLSDR--KSIKQLAEVAEREMEGIDILVNNAGIT-RDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMM 148 (266)
T ss_dssp CSSEEEEECCTTSH--HHHHHHHHHHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeecCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 667888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... +...+...
T Consensus 149 ~~~-~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~ 223 (266)
T 3grp_A 149 RRR-YGRIINITSIVGVVG--NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN--EKQKEAIM 223 (266)
T ss_dssp HHT-CEEEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC--HHHHHHHH
T ss_pred HcC-CcEEEEECCHHHcCC--CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC--HHHHHHHH
Confidence 876 799999999998733 5788999999999999999999999999999999999999999876532 22333444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|+++++.|+ |+|++++||+++.++++||+++.+|||+++
T Consensus 224 ~~~p~~r~~~~e-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3grp_A 224 AMIPMKRMGIGE-EIAFATVYLASDEAAYLTGQTLHINGGMAM 265 (266)
T ss_dssp TTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCeee
Confidence 778999999998 999999999999999999999999999875
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=248.50 Aligned_cols=196 Identities=22% Similarity=0.274 Sum_probs=172.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++.+|++|+ ++++++++++.+++|++|++|||||.... ..++.+.+.++|++++++|+.++++++++++|+|
T Consensus 56 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 133 (271)
T 3tzq_B 56 GRGAVHHVVDLTNE--VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133 (271)
T ss_dssp CTTCEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45788999999999 99999999999999999999999998633 5567789999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.. ...
T Consensus 134 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-~~~ 209 (271)
T 3tzq_B 134 ISAG-GGAIVNISSATAHAA--YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIV-DIF 209 (271)
T ss_dssp HHTT-CEEEEEECCGGGTSB--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHH-HHH
T ss_pred HhcC-CCEEEEECCHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHH-HHH
Confidence 8876 799999999998733 688899999999999999999999999999999999999999988744443333 334
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....+++++.+|+ |+|++++||+++.++++||+++.+|||+..
T Consensus 210 ~~~~~~~r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 252 (271)
T 3tzq_B 210 ATHHLAGRIGEPH-EIAELVCFLASDRAAFITGQVIAADSGLLA 252 (271)
T ss_dssp HTTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCcccCCcCCCEEEECCCccc
Confidence 4778899999998 999999999999999999999999999433
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-39 Score=250.67 Aligned_cols=191 Identities=24% Similarity=0.407 Sum_probs=173.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 77 ~~~~~~~~~D~~d~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (269)
T 4dmm_A 77 GGEAFAVKADVSQE--SEVEALFAAVIERWGRLDVLVNNAGIT-RDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIML 153 (269)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++...... ....
T Consensus 154 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-----~~~~ 225 (269)
T 4dmm_A 154 KQR-SGRIINIASVVGEMG--NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-----EKLL 225 (269)
T ss_dssp HHT-CCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-----HHHG
T ss_pred HcC-CcEEEEECchhhcCC--CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-----HHHH
Confidence 876 799999999998733 58889999999999999999999999999999999999999998765321 3334
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++++|+ |+|++++||+++ .+.++||+++.+|||+.+
T Consensus 226 ~~~p~~r~~~~~-dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 226 EVIPLGRYGEAA-EVAGVVRFLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp GGCTTSSCBCHH-HHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence 678999999998 999999999997 788999999999999876
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=252.13 Aligned_cols=197 Identities=20% Similarity=0.262 Sum_probs=175.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH--H
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR--R 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~ 85 (219)
+.++.++.||++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++| .
T Consensus 72 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 72 GHDVDGSSCDVTST--DEVHAAVAAAVERFGPIGILVNSAGRN-GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHCSCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 56899999999999 999999999999999999999999986 667888999999999999999999999999999 5
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--------
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-------- 157 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-------- 157 (219)
|++++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.....
T Consensus 149 ~~~~~-~g~iV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~ 225 (279)
T 3sju_A 149 MREAG-WGRIVNIASTGGKQG--VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWG 225 (279)
T ss_dssp HHHHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSC
T ss_pred HhhcC-CcEEEEECChhhccC--CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhccc
Confidence 77665 699999999999733 6888999999999999999999999999999999999999999765421
Q ss_pred -chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 -GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+..........|++++.+|+ |+|++++||+++.++++||+++.+|||++.+
T Consensus 226 ~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~a~~itG~~i~vdGG~~~y 279 (279)
T 3sju_A 226 VTEQEVHERFNAKIPLGRYSTPE-EVAGLVGYLVTDAAASITAQALNVCGGLGNY 279 (279)
T ss_dssp CCHHHHHHHHHTTCTTSSCBCHH-HHHHHHHHHTSSGGGGCCSCEEEESTTCCCC
T ss_pred CChHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhCccccCcCCcEEEECCCccCC
Confidence 2233444455778999999998 9999999999999999999999999998753
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=249.02 Aligned_cols=199 Identities=21% Similarity=0.323 Sum_probs=172.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|+|.
T Consensus 54 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~ 130 (257)
T 3imf_A 54 PGQILTVQMDVRNT--DDIQKMIEQIDEKFGRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWI 130 (257)
T ss_dssp TTCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46899999999999 999999999999999999999999985 667888999999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC-CCCeEEEEeecCCccCCCCccccc-hHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAVG-QERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~-~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~ 165 (219)
+++..|+||++||..+... .++...|+++|+|+++|+++++.|++ ++|||+|+|+||++.|++...... .+.....
T Consensus 131 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~ 208 (257)
T 3imf_A 131 EKGIKGNIINMVATYAWDA--GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKR 208 (257)
T ss_dssp HHTCCCEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHH
T ss_pred hhCCCcEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHH
Confidence 5544799999999998733 68889999999999999999999997 779999999999999997554211 1111222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.....|++++.+|+ |+|++++||+++.++++||+++.+|||+++..
T Consensus 209 ~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 254 (257)
T 3imf_A 209 TIQSVPLGRLGTPE-EIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQ 254 (257)
T ss_dssp HHTTSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred HHhcCCCCCCcCHH-HHHHHHHHHcCchhcCccCCEEEECCCcccCC
Confidence 33667899999998 99999999999999999999999999998753
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=250.97 Aligned_cols=194 Identities=30% Similarity=0.422 Sum_probs=174.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|+
T Consensus 76 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 152 (270)
T 3ftp_A 76 GLEGRGAVLNVNDA--TAVDALVESTLKEFGALNVLVNNAGIT-QDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152 (270)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++..... .+ ......
T Consensus 153 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~-~~~~~~ 227 (270)
T 3ftp_A 153 KAR-GGRIVNITSVVGSAG--NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP-QE-QQTALK 227 (270)
T ss_dssp HHT-CEEEEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC-HH-HHHHHH
T ss_pred HcC-CCEEEEECchhhCCC--CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC-HH-HHHHHH
Confidence 876 799999999998743 6889999999999999999999999999999999999999999866532 22 233344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.+.++||+++++|||+.+
T Consensus 228 ~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 228 TQIPLGRLGSPE-DIAHAVAFLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp TTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence 678899999998 999999999999999999999999999875
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=253.02 Aligned_cols=199 Identities=25% Similarity=0.375 Sum_probs=176.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|+||||||.. ...++.+.+.++|++++++|+.++++++++++|.|+
T Consensus 76 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (277)
T 4fc7_A 76 GRRCLPLSMDVRAP--PAVMAAVDQALKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFF 152 (277)
T ss_dssp SSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCcCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999985 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-chHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-GQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~ 166 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... .........
T Consensus 153 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 229 (277)
T 4fc7_A 153 RDH-GGVIVNITATLGNRG--QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTK 229 (277)
T ss_dssp HHH-CEEEEEECCSHHHHT--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHH
T ss_pred HcC-CCEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHH
Confidence 765 799999999998743 5788999999999999999999999999999999999999998643322 222333344
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
....|++++++|+ |+|++++||+|+.++++||+++.+|||+++..+
T Consensus 230 ~~~~p~~r~~~p~-dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~~ 275 (277)
T 4fc7_A 230 VTASPLQRLGNKT-EIAHSVLYLASPLASYVTGAVLVADGGAWLTFP 275 (277)
T ss_dssp HHTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTHHHHCC
T ss_pred hccCCCCCCcCHH-HHHHHHHHHcCCccCCcCCCEEEECCCcccCCC
Confidence 4778999999998 999999999999999999999999999987654
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=251.42 Aligned_cols=196 Identities=24% Similarity=0.350 Sum_probs=176.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.+++||++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++
T Consensus 91 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 167 (293)
T 3rih_A 91 GNVIGVRLDVSDP--GSCADAARTVVDAFGALDVVCANAGIF-PEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA 167 (293)
T ss_dssp SCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH
T ss_pred CcEEEEEEeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 5899999999999 999999999999999999999999986 6688899999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+...+ .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++..... +........
T Consensus 168 ~~-~g~iV~isS~~~~~~~-~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~ 243 (293)
T 3rih_A 168 SG-RGRVILTSSITGPVTG-YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG--EEYISGMAR 243 (293)
T ss_dssp HS-SCEEEEECCSBTTTBB-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC--HHHHHHHHT
T ss_pred cC-CCEEEEEeChhhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc--HHHHHHHHh
Confidence 76 7999999999885233 6788999999999999999999999999999999999999998765432 223333446
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|++++++|+ |+|++++||+++.++++||++|.+|||+.+..
T Consensus 244 ~~p~~r~~~p~-dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~ 286 (293)
T 3rih_A 244 SIPMGMLGSPV-DIGHLAAFLATDEAGYITGQAIVVDGGQVLPE 286 (293)
T ss_dssp TSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTCBS
T ss_pred cCCCCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccCCC
Confidence 78999999998 99999999999999999999999999998864
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-39 Score=250.93 Aligned_cols=198 Identities=25% Similarity=0.351 Sum_probs=174.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 72 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 148 (277)
T 4dqx_A 72 GSKAFGVRVDVSSA--KDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMR 148 (277)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc----chHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV----GQERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~ 163 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... ......
T Consensus 149 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 225 (277)
T 4dqx_A 149 RNG-GGSIINTTSYTATSA--IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLR 225 (277)
T ss_dssp TTT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHH
T ss_pred HcC-CcEEEEECchhhCcC--CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHH
Confidence 876 789999999998733 6889999999999999999999999999999999999999999743321 112222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.......|++++.+|+ |+|++++||+++.++++||+++.+|||+++..
T Consensus 226 ~~~~~~~~~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 273 (277)
T 4dqx_A 226 SDFNARAVMDRMGTAE-EIAEAMLFLASDRSRFATGSILTVDGGSSIGN 273 (277)
T ss_dssp HHHHTTSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSSSSCC
T ss_pred HHHHhcCcccCCcCHH-HHHHHHHHHhCCccCCCcCCEEEECCchhhhh
Confidence 2244677899999998 99999999999999999999999999998764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=250.79 Aligned_cols=196 Identities=22% Similarity=0.284 Sum_probs=172.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+++.+++||++|. ++++++++++.+++|++|+||||||+... ..++.+.+.++|++.+++|+.+++.++++++|+
T Consensus 81 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 158 (293)
T 3grk_A 81 GAFVAGHCDVADA--ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKL 158 (293)
T ss_dssp TCEEEEECCTTCH--HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3588999999999 99999999999999999999999998632 577888999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|++ +|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+.....
T Consensus 159 m~~---~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~ 233 (293)
T 3grk_A 159 MAD---GGSILTLTYYGAEKV--MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKW 233 (293)
T ss_dssp TTT---CEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHH
T ss_pred ccC---CCEEEEEeehhhccC--CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHH
Confidence 975 689999999998733 688899999999999999999999999999999999999999987765554445555
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.....|++++.+|+ |+|++++||+++.++++||+++.+|||+++..
T Consensus 234 ~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 279 (293)
T 3grk_A 234 NEYNAPLRRTVTID-EVGDVGLYFLSDLSRSVTGEVHHADSGYHVIG 279 (293)
T ss_dssp HHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHhcCCCCCCCCHH-HHHHHHHHHcCccccCCcceEEEECCCcccCC
Confidence 55778999999998 99999999999999999999999999998875
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=250.32 Aligned_cols=196 Identities=20% Similarity=0.310 Sum_probs=167.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 75 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 151 (281)
T 3v2h_A 75 SGTVLHHPADMTKP--SEIADMMAMVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMK 151 (281)
T ss_dssp SSCEEEECCCTTCH--HHHHHHHHHHHHHTSSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCH--HHHHHHHHHHHHHCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH-------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE------- 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------- 160 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++........
T Consensus 152 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 228 (281)
T 3v2h_A 152 KKG-WGRIINIASAHGLVA--SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGIT 228 (281)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------
T ss_pred HcC-CCEEEEECCcccccC--CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCC
Confidence 876 799999999998733 5888999999999999999999999999999999999999999876543211
Q ss_pred ---HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 ---RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+......|++++.+|+ |+|++++||+++.++++||+++.+|||++.
T Consensus 229 ~~~~~~~~~~~~~p~~r~~~~e-dvA~~v~~L~s~~a~~itG~~i~vdGG~~~ 280 (281)
T 3v2h_A 229 EEQVINEVMLKGQPTKKFITVE-QVASLALYLAGDDAAQITGTHVSMDGGWTA 280 (281)
T ss_dssp -----------CCTTCSCBCHH-HHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHhcCCCCCccCHH-HHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence 1112233567889999998 999999999999999999999999999864
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=250.65 Aligned_cols=198 Identities=23% Similarity=0.323 Sum_probs=154.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+.. ...++.+.+.++|++++++|+.++++++++++|.|
T Consensus 78 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 155 (280)
T 4da9_A 78 GARVIFLRADLADL--SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAM 155 (280)
T ss_dssp TCCEEEEECCTTSG--GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56799999999999 9999999999999999999999999831 45778889999999999999999999999999999
Q ss_pred HhcCC--CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKA--GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~--~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++++. .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++....... ....
T Consensus 156 ~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~ 232 (280)
T 4da9_A 156 LASDARASRSIINITSVSAVMT--SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-YDGL 232 (280)
T ss_dssp HHHCCCCCEEEEEECCC---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------
T ss_pred HHhCCCCCCEEEEEcchhhccC--CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-HHHH
Confidence 87532 579999999998733 588899999999999999999999999999999999999999987654322 1112
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......|++++++|+ |+|++++||+++.++++||+++.+|||+++.
T Consensus 233 ~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 278 (280)
T 4da9_A 233 IESGLVPMRRWGEPE-DIGNIVAGLAGGQFGFATGSVIQADGGLSIG 278 (280)
T ss_dssp ---------CCBCHH-HHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred HhhcCCCcCCcCCHH-HHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence 221267889999998 9999999999999999999999999999764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=250.59 Aligned_cols=191 Identities=19% Similarity=0.324 Sum_probs=165.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 76 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 152 (267)
T 3u5t_A 76 GGKALTAQADVSDP--AAVRRLFATAEEAFGGVDVLVNNAGIM-PLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLR 152 (267)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56789999999999 999999999999999999999999986 677888999999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+. .....
T Consensus 153 ~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~ 226 (267)
T 3u5t_A 153 V---GGRIINMSTSQVGLL--HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV-RDRFA 226 (267)
T ss_dssp E---EEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------C-HHHHH
T ss_pred h---CCeEEEEeChhhccC--CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHH-HHHHH
Confidence 5 589999999988633 58889999999999999999999999999999999999999998765333322 23334
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...|++++.+|+ |+|++++||+++.+.++||+++.+|||+
T Consensus 227 ~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 3u5t_A 227 KLAPLERLGTPQ-DIAGAVAFLAGPDGAWVNGQVLRANGGI 266 (267)
T ss_dssp TSSTTCSCBCHH-HHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCccCCEEEeCCCc
Confidence 678899999998 9999999999999999999999999996
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=251.81 Aligned_cols=196 Identities=23% Similarity=0.295 Sum_probs=175.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.+++||++|. ++++++++++.+++|++|+||||||+... ..++.+.+.++|++.+++|+.+++.+++.++|+|
T Consensus 81 ~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 158 (296)
T 3k31_A 81 VKLTVPCDVSDA--ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM 158 (296)
T ss_dssp CCEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC
T ss_pred CeEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 468899999999 99999999999999999999999998632 2678889999999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||+|+|+||++.|++.......+......
T Consensus 159 ~~---~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 233 (296)
T 3k31_A 159 TN---GGSILTLSYYGAEKV--VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWN 233 (296)
T ss_dssp TT---CEEEEEEECGGGTSC--CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHH
T ss_pred hc---CCEEEEEEehhhccC--CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHH
Confidence 75 589999999998733 6888999999999999999999999999999999999999999877654444444555
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
....|++++.+|+ |+|++++||+++.++++||+++.+|||+++...
T Consensus 234 ~~~~p~~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~ 279 (296)
T 3k31_A 234 KYNSPLRRNTTLD-DVGGAALYLLSDLGRGTTGETVHVDCGYHVVGM 279 (296)
T ss_dssp HHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred HhcCCCCCCCCHH-HHHHHHHHHcCCccCCccCCEEEECCCccccCC
Confidence 5778999999998 999999999999999999999999999988753
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-38 Score=246.74 Aligned_cols=197 Identities=18% Similarity=0.252 Sum_probs=170.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 70 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 146 (281)
T 3s55_A 70 GRRCISAKVDVKDR--AALESFVAEAEDTLGGIDIAITNAGIS-TIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMI 146 (281)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------- 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------- 157 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++.....
T Consensus 147 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 223 (281)
T 3s55_A 147 KRN-YGRIVTVSSMLGHSA--NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLE 223 (281)
T ss_dssp HHT-CEEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC------
T ss_pred HcC-CCEEEEECChhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccc
Confidence 876 799999999999733 5788999999999999999999999999999999999999999875311
Q ss_pred --chHHHHHHH-HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 --GQERAVKLV-REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 --~~~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......... ......+++..|+ |+|++++||+++.++++||+++++|||+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 224 KPTLKDVESVFASLHLQYAPFLKPE-EVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp -CCHHHHHHHHHHHCSSSCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred ccchhHHHHHHHhhhccCcCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 011111111 1122237788888 9999999999999999999999999998764
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-39 Score=251.10 Aligned_cols=196 Identities=26% Similarity=0.325 Sum_probs=168.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 72 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (277)
T 3tsc_A 72 NRRIVAAVVDTRDF--DRLRKVVDDGVAALGRLDIIVANAGVA-APQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRII 148 (277)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46789999999999 999999999999999999999999986 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH---
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK--- 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~--- 164 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++............
T Consensus 149 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 226 (277)
T 3tsc_A 149 EGGRGGSIILISSAAGMKM--QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMET 226 (277)
T ss_dssp HHTSCEEEEEECCGGGTSC--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHT
T ss_pred hcCCCCEEEEEccHhhCCC--CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccc
Confidence 8654689999999999733 68889999999999999999999999999999999999999998764211111100
Q ss_pred ------HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 ------LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ------~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|. ++.+|+ |+|++++||+++.++++||+++.+|||++.
T Consensus 227 ~~~~~~~~~~~~p~-r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 276 (277)
T 3tsc_A 227 NPQLSHVLTPFLPD-WVAEPE-DIADTVCWLASDESRKVTAAQIPVDQGSTQ 276 (277)
T ss_dssp CGGGTTTTCCSSSC-SCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cHHHHHHhhhccCC-CCCCHH-HHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence 01112233 567777 999999999999999999999999999875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=246.51 Aligned_cols=200 Identities=23% Similarity=0.307 Sum_probs=176.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+..+++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+++
T Consensus 54 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 130 (269)
T 3vtz_A 54 VSDHFKIDVTNE--EEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI 130 (269)
T ss_dssp SSEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 577899999999 999999999999999999999999986 66788899999999999999999999999999999887
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------hH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---------QE 160 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~---------~~ 160 (219)
+ .|+||++||..++.. .++...|+++|+|+++|+++++.|+++ ||++|+|+||++.|++...... .+
T Consensus 131 ~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 206 (269)
T 3vtz_A 131 G-HGSIINIASVQSYAA--TKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVE 206 (269)
T ss_dssp T-CEEEEEECCGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHH
T ss_pred C-CCEEEEECchhhccC--CCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhH
Confidence 6 799999999999733 688899999999999999999999998 8999999999999998654221 02
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCccc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRS 217 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~ 217 (219)
..........|++++.+|+ |+|++++||+++.+.++||+++.+|||+....+...+
T Consensus 207 ~~~~~~~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~p 262 (269)
T 3vtz_A 207 RKIEEWGRQHPMGRIGRPE-EVAEVVAFLASDRSSFITGACLTVDGGLLSKLPISTP 262 (269)
T ss_dssp HHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCCCCCC
T ss_pred HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCCccCCCcCcEEEECCCccccCCCCCC
Confidence 2333344678999999998 9999999999999999999999999999887765543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=248.27 Aligned_cols=196 Identities=27% Similarity=0.355 Sum_probs=168.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 76 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 152 (280)
T 3pgx_A 76 GRKALTRVLDVRDD--AALRELVADGMEQFGRLDVVVANAGVL-SWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI 152 (280)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH--
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL-- 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~-- 165 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++.......+.....
T Consensus 153 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 230 (280)
T 3pgx_A 153 EAGNGGSIVVVSSSAGLKA--TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPS 230 (280)
T ss_dssp HHCSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGG
T ss_pred hcCCCCEEEEEcchhhccC--CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCch
Confidence 8654689999999999733 688999999999999999999999999999999999999999987642111111000
Q ss_pred ------HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 ------VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ------~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|. ++.+|+ |+|++++||+++.++++||+++.+|||+..
T Consensus 231 ~~~~~~~~~~~~~-r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 279 (280)
T 3pgx_A 231 FVHSFPPMPVQPN-GFMTAD-EVADVVAWLAGDGSGTLTGTQIPVDKGALK 279 (280)
T ss_dssp GGGGSCCBTTBCS-SCBCHH-HHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred hhhhhhhcccCCC-CCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 0012233 567777 999999999999999999999999999864
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=250.47 Aligned_cols=197 Identities=25% Similarity=0.349 Sum_probs=170.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 74 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 150 (277)
T 3gvc_A 74 GCGAAACRVDVSDE--QQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMI 150 (277)
T ss_dssp CSSCEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~ 165 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++...... .......
T Consensus 151 ~~~-~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 227 (277)
T 3gvc_A 151 ERG-GGAIVNLSSLAGQVA--VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAG 227 (277)
T ss_dssp HTT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------C
T ss_pred hcC-CcEEEEEcchhhccC--CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHH
Confidence 876 799999999998733 68889999999999999999999999999999999999999997654322 1011111
Q ss_pred HH---hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VR---EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~---~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. ...|++++.+|+ |+|++++||+++.++++||+++.+|||+...
T Consensus 228 ~~~~~~~~~~~r~~~pe-dvA~~v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 228 GARSMIARLQGRMAAPE-EMAGIVVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp CHHHHHHHHHSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred hhhhhhhccccCCCCHH-HHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence 11 145678888888 9999999999999999999999999998653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=247.41 Aligned_cols=191 Identities=23% Similarity=0.395 Sum_probs=171.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++.+++|+.+++.+++++.|.|+
T Consensus 80 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 156 (271)
T 3v2g_A 80 GGRAVAIRADNRDA--EAIEQAIRETVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG 156 (271)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+. ..+.++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++....... .+...
T Consensus 157 ~---~g~iv~isS~~~~-~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---~~~~~ 229 (271)
T 3v2g_A 157 D---GGRIITIGSNLAE-LVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH---AEAQR 229 (271)
T ss_dssp T---TCEEEEECCGGGT-CCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS---HHHHH
T ss_pred c---CCEEEEEeChhhc-cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh---HHHHH
Confidence 4 6899999998776 333678899999999999999999999999999999999999999987653322 22233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++++++|+ |+|++++||+++.++++||+++.+|||+.
T Consensus 230 ~~~~~~r~~~pe-dvA~~v~fL~s~~~~~itG~~i~vdGG~~ 270 (271)
T 3v2g_A 230 ERIATGSYGEPQ-DIAGLVAWLAGPQGKFVTGASLTIDGGAN 270 (271)
T ss_dssp HTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCcccCCccCCEEEeCcCcc
Confidence 678899999998 99999999999999999999999999985
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=244.14 Aligned_cols=196 Identities=21% Similarity=0.306 Sum_probs=166.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.+++++++|++|. ++++++++++.++++++|++|||||+. ...++.+.+.++|++.+++|+.+++.+++.++|+|
T Consensus 71 ~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 147 (266)
T 3o38_A 71 GLGRVEAVVCDVTST--EAVDALITQTVEKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYF 147 (266)
T ss_dssp CSSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeCCCCH--HHHHHHHHHHHHHhCCCcEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 346899999999999 999999999999999999999999986 66788899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++.+++||++||..+... .++...|+++|+|++.|+++++.|++++||++++|+||++.|++.......+.. ...
T Consensus 148 ~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~ 224 (266)
T 3o38_A 148 RGVDHGGVIVNNASVLGWRA--QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL-DRL 224 (266)
T ss_dssp HTSSCCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------
T ss_pred HhcCCCeEEEEeCCHHHcCC--CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH-HHH
Confidence 98744789999999998733 678899999999999999999999999999999999999999987765443333 333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
....+++++.+|+ |+|++++||+++.+.++||+++.+|||++
T Consensus 225 ~~~~~~~r~~~~~-dva~~i~~l~s~~~~~~tG~~i~vdgG~~ 266 (266)
T 3o38_A 225 ASDEAFGRAAEPW-EVAATIAFLASDYSSYMTGEVVSVSSQRA 266 (266)
T ss_dssp --CCTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred HhcCCcCCCCCHH-HHHHHHHHHcCccccCccCCEEEEcCCcC
Confidence 3667889999998 99999999999989999999999999975
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=246.04 Aligned_cols=195 Identities=23% Similarity=0.329 Sum_probs=172.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 53 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 129 (255)
T 4eso_A 53 GPRVHALRSDIADL--NEIAVLGAAAGQTLGAIDLLHINAGVS-ELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIR 129 (255)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSSEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CCcceEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 35789999999999 999999999999999999999999986 667888999999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-ch---HHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-GQ---ERAV 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~---~~~~ 163 (219)
+ +|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... .. ....
T Consensus 130 ~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 204 (255)
T 4eso_A 130 E---GGSIVFTSSVADEGG--HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFK 204 (255)
T ss_dssp E---EEEEEEECCGGGSSB--CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHH
T ss_pred c---CCEEEEECChhhcCC--CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHH
Confidence 5 589999999998733 6889999999999999999999999999999999999999999865421 11 1222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.......|++++++|+ |+|++++||+++ ++++||+++.+|||+....
T Consensus 205 ~~~~~~~p~~r~~~pe-dvA~~v~~L~s~-~~~itG~~i~vdGG~~~~l 251 (255)
T 4eso_A 205 TLGDNITPMKRNGTAD-EVARAVLFLAFE-ATFTTGAKLAVDGGLGQKL 251 (255)
T ss_dssp HHHHHHSTTSSCBCHH-HHHHHHHHHHHT-CTTCCSCEEEESTTTTTTB
T ss_pred HHHhccCCCCCCcCHH-HHHHHHHHHcCc-CcCccCCEEEECCCccccC
Confidence 3344668999999998 999999999998 8999999999999997653
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=248.14 Aligned_cols=201 Identities=23% Similarity=0.334 Sum_probs=161.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|++|||||......++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 57 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 134 (259)
T 3edm_A 57 GRSALAIKADLTNA--AEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMA 134 (259)
T ss_dssp TSCCEEEECCTTCH--HHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56789999999999 9999999999999999999999999765667888999999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... +.++...|+++|+|+++|+++++.|+++. ||+|+|+||++.|++.......+. .....
T Consensus 135 ~---~g~iv~isS~~~~~~-~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~ 208 (259)
T 3edm_A 135 K---GGAIVTFSSQAGRDG-GGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEV-RERVA 208 (259)
T ss_dssp E---EEEEEEECCHHHHHC-CSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------
T ss_pred c---CCEEEEEcCHHhccC-CCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHH-HHHHH
Confidence 5 589999999988622 26788999999999999999999999886 999999999999998776543322 23333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRS 217 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~~ 217 (219)
...|++++++|+ |+|++++||+++.++++||+++.+|||+..+.+...+
T Consensus 209 ~~~p~~r~~~pe-dva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~~~~~ 257 (259)
T 3edm_A 209 GATSLKREGSSE-DVAGLVAFLASDDAAYVTGACYDINGGVLFSEGHHHH 257 (259)
T ss_dssp ------CCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESBCSSBC------
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCccccCccCCEEEECCCcCCCCCCCCC
Confidence 667889999998 9999999999999999999999999999988765543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=244.94 Aligned_cols=193 Identities=21% Similarity=0.263 Sum_probs=170.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+. +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 81 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~-g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 156 (275)
T 4imr_A 81 GGTAQELAGDLSEA--GAGTDLIERAEAI-APVDILVINASAQ-INATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMV 156 (275)
T ss_dssp TCCEEEEECCTTST--THHHHHHHHHHHH-SCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCH--HHHHHHHHHHHHh-CCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 9999999999887 9999999999986 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~ 165 (219)
+++ .|+||++||..+..+ .+....|+++|+|+++|+++++.|++++||++|+|+||+++|++...... .+.....
T Consensus 157 ~~~-~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 233 (275)
T 4imr_A 157 ARK-WGRVVSIGSINQLRP--KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEY 233 (275)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHH
T ss_pred hcC-CcEEEEECCHHhCCC--CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHH
Confidence 876 799999999998742 57778899999999999999999999999999999999999998654321 2233333
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.....|++++++|+ |+|++++||+++.++++||+++.+|||+
T Consensus 234 ~~~~~p~~r~~~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~ 275 (275)
T 4imr_A 234 VRTLNWMGRAGRPE-EMVGAALFLASEACSFMTGETIFLTGGY 275 (275)
T ss_dssp HHHHSTTCSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HhhcCccCCCcCHH-HHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence 32333899999998 9999999999999999999999999996
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=249.78 Aligned_cols=195 Identities=23% Similarity=0.340 Sum_probs=174.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 96 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 173 (291)
T 3ijr_A 96 GVKCVLLPGDLSDE--QHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK 173 (291)
T ss_dssp TCCEEEEESCTTSH--HHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 56899999999999 9999999999999999999999999865556788899999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||+|.|++.......+... ...
T Consensus 174 ~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~ 247 (291)
T 3ijr_A 174 Q---GDVIINTASIVAYEG--NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVS-QFG 247 (291)
T ss_dssp T---TCEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHH-HTT
T ss_pred h---CCEEEEEechHhcCC--CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHH-HHH
Confidence 4 589999999998743 5788999999999999999999999999999999999999999876544443333 333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|++++||+++.++++||+++.+|||+.+.
T Consensus 248 ~~~p~~r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 290 (291)
T 3ijr_A 248 SNVPMQRPGQPY-ELAPAYVYLASSDSSYVTGQMIHVNGGVIVN 290 (291)
T ss_dssp TTSTTSSCBCGG-GTHHHHHHHHSGGGTTCCSCEEEESSSCCCC
T ss_pred ccCCCCCCcCHH-HHHHHHHHHhCCccCCCcCCEEEECCCcccC
Confidence 678899999998 9999999999999999999999999998764
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=245.02 Aligned_cols=196 Identities=19% Similarity=0.304 Sum_probs=172.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.++.||++|. ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|
T Consensus 73 ~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 149 (269)
T 3gk3_A 73 AGRDFKAYAVDVADF--ESCERCAEKVLADFGKVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGM 149 (269)
T ss_dssp TTCCCEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356799999999999 999999999999999999999999986 56788889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .|+||++||..+... .++...|+++|+|+++|++++++|++++||++++|+||++.|++........ .....
T Consensus 150 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~ 225 (269)
T 3gk3_A 150 VERR-FGRIVNIGSVNGSRG--AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV-LEAKI 225 (269)
T ss_dssp HHHT-CEEEEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCS
T ss_pred HhcC-CCEEEEeCChhhccC--CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH-HHHHh
Confidence 8876 799999999998743 5888999999999999999999999999999999999999999987643221 22123
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++++.+|+ |+|+++++|+++.+.++||+++++|||+++
T Consensus 226 ~~~~~~~~~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdgG~~~ 268 (269)
T 3gk3_A 226 LPQIPVGRLGRPD-EVAALIAFLCSDDAGFVTGADLAINGGMHM 268 (269)
T ss_dssp GGGCTTSSCBCHH-HHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred hhcCCcCCccCHH-HHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence 3567888888888 999999999999999999999999999876
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-39 Score=253.02 Aligned_cols=195 Identities=22% Similarity=0.281 Sum_probs=170.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|++|||||......++.+.+.++|++.+++|+.++++++++++|+|+
T Consensus 99 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 176 (294)
T 3r3s_A 99 GRKAVLLPGDLSDE--SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP 176 (294)
T ss_dssp TCCEEECCCCTTSH--HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 56789999999999 9999999999999999999999999864567788899999999999999999999999999985
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..++.. .++...|+++|+|+++|+++++.|++++||++|+|+||+|.|++...............
T Consensus 177 ~---~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 251 (294)
T 3r3s_A 177 K---GASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFG 251 (294)
T ss_dssp T---TCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTT
T ss_pred c---CCEEEEECChhhccC--CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHH
Confidence 4 589999999999733 68889999999999999999999999999999999999999987332111111112233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.++++||+++.+|||+++
T Consensus 252 ~~~p~~r~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 252 QQTPMKRAGQPA-ELAPVYVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp TTSTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 567889999998 999999999999999999999999999875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=241.79 Aligned_cols=197 Identities=24% Similarity=0.384 Sum_probs=167.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++++|++|+ ++++++++++.+.+ +++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|
T Consensus 69 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 145 (273)
T 1ae1_A 69 GLNVEGSVCDLLSR--TERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLL 145 (273)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45789999999999 99999999999999 8999999999985 56788889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERA 162 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~ 162 (219)
++++ .|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++.|++...... ....
T Consensus 146 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 222 (273)
T 1ae1_A 146 KASQ-NGNVIFLSSIAGFSA--LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 222 (273)
T ss_dssp HHHT-SEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH
T ss_pred HhcC-CcEEEEEcCHhhcCC--CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHH
Confidence 8765 699999999998733 57889999999999999999999999999999999999999998654322 1222
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........|++++.+|+ |+|+++++|+++.+++++|+++.+|||+++.
T Consensus 223 ~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 270 (273)
T 1ae1_A 223 IDNFIVKTPMGRAGKPQ-EVSALIAFLCFPAASYITGQIIWADGGFTAN 270 (273)
T ss_dssp HHHHHHHSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCcCCCEEEECCCcccC
Confidence 22233567888989998 9999999999998899999999999998764
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=239.55 Aligned_cols=194 Identities=21% Similarity=0.246 Sum_probs=168.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||+..+..++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 49 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 126 (254)
T 3kzv_A 49 GDRFFYVVGDITED--SVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELK 126 (254)
T ss_dssp GGGEEEEESCTTSH--HHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35789999999999 9999999999999999999999999865668889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-------hH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-------QE 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~ 160 (219)
+++ |+||++||..+... .++...|+++|+|+++|+++++.|+ .|||+|+|+||+++|++...... .+
T Consensus 127 ~~~--g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 200 (254)
T 3kzv_A 127 KTN--GNVVFVSSDACNMY--FSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSA 200 (254)
T ss_dssp HHT--CEEEEECCSCCCCS--SCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCH
T ss_pred hcC--CeEEEEcCchhccC--CCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCH
Confidence 764 99999999998733 6889999999999999999999998 68999999999999998765422 23
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCccc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~ 210 (219)
..........|++++.+|+ |+|++++||+++. .+++||+++.+|||...
T Consensus 201 ~~~~~~~~~~~~~r~~~p~-dva~~v~~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 201 EQLKMFRGLKENNQLLDSS-VPATVYAKLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp HHHHHHHHHHTTC----CH-HHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred HHHHHHHHHHhcCCcCCcc-cHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence 3334444778999999998 9999999999998 49999999999999864
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=248.36 Aligned_cols=197 Identities=26% Similarity=0.480 Sum_probs=168.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|+
T Consensus 106 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 182 (317)
T 3oec_A 106 GRRIIARQADVRDL--ASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMI 182 (317)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------- 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----------- 156 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++....
T Consensus 183 ~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~ 260 (317)
T 3oec_A 183 ERGQGGSVIFVSSTVGLRG--APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLE 260 (317)
T ss_dssp HTCSCEEEEEECCGGGSSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCS
T ss_pred HcCCCCEEEEECcHHhcCC--CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcc
Confidence 8654689999999999733 688899999999999999999999999999999999999999875321
Q ss_pred -cchHHHHHHHH--hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 -VGQERAVKLVR--EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 -~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+....... ...| +++..|+ |+|++++||+|+.++++||++|.+|||+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~p-~~~~~pe-dvA~av~fL~s~~a~~itG~~i~vdGG~~~~ 316 (317)
T 3oec_A 261 NPTREDAAELFSQLTLLP-IPWVEPE-DVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316 (317)
T ss_dssp SCCHHHHHHHHTTTCSSS-SSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred ccchhHHHHHHhhhccCC-CCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence 01111122111 1223 5677887 9999999999999999999999999998753
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-39 Score=249.60 Aligned_cols=197 Identities=20% Similarity=0.303 Sum_probs=161.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 62 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 138 (262)
T 3ksu_A 62 GAKVALYQSDLSNE--EEVAKLFDFAEKEFGKVDIAINTVGKV-LKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN 138 (262)
T ss_dssp TCEEEEEECCCCSH--HHHHHHHHHHHHHHCSEEEEEECCCCC-CSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence 56899999999999 999999999999999999999999986 567888999999999999999999999999999994
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ +|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||+++|++.......+ ......
T Consensus 139 ~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~ 212 (262)
T 3ksu_A 139 P---NGHIITIATSLLAAY--TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE-STAFHK 212 (262)
T ss_dssp E---EEEEEEECCCHHHHH--HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------
T ss_pred C---CCEEEEEechhhccC--CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH-HHHHHH
Confidence 3 589999999988743 5778899999999999999999999999999999999999999865533322 223334
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
...|.+++.+|+ |+|++++||+++ +.++||+++.+|||+.....+.
T Consensus 213 ~~~~~~r~~~pe-dvA~~v~~L~s~-~~~itG~~i~vdGg~~~~~~~~ 258 (262)
T 3ksu_A 213 SQAMGNQLTKIE-DIAPIIKFLTTD-GWWINGQTIFANGGYTTREGHH 258 (262)
T ss_dssp ---CCCCSCCGG-GTHHHHHHHHTT-TTTCCSCEEEESTTCCCC----
T ss_pred hcCcccCCCCHH-HHHHHHHHHcCC-CCCccCCEEEECCCccCCCccc
Confidence 667889999998 999999999998 8999999999999998776543
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-37 Score=240.37 Aligned_cols=195 Identities=22% Similarity=0.317 Sum_probs=173.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|. ++++++++++.+.++++|++|||||+. ...++.+.+.++|++.+++|+.+++.+++.++|+|+
T Consensus 72 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 148 (267)
T 3gdg_A 72 GIKAKAYKCQVDSY--ESCEKLVKDVVADFGQIDAFIANAGAT-ADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFK 148 (267)
T ss_dssp CCCEECCBCCTTCH--HHHHHHHHHHHHHTSCCSEEEECCCCC-CCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceeEEecCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667788999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+......++...|+++|+|++.|++++++|+++. |++|+|+||++.|++.... .+.......
T Consensus 149 ~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~ 224 (267)
T 3gdg_A 149 ERG-TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWH 224 (267)
T ss_dssp HHT-CCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHH
T ss_pred HcC-CceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHH
Confidence 876 799999999988743322478899999999999999999999887 9999999999999987654 223334444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.+.++||+++.+|||+++
T Consensus 225 ~~~~~~r~~~~~-dva~~~~~l~s~~~~~itG~~i~vdgG~~~ 266 (267)
T 3gdg_A 225 SMIPMGRDGLAK-ELKGAYVYFASDASTYTTGADLLIDGGYTT 266 (267)
T ss_dssp TTSTTSSCEETH-HHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred hcCCCCCCcCHH-HHHhHhheeecCccccccCCEEEECCceec
Confidence 778999999998 999999999999999999999999999975
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=238.67 Aligned_cols=194 Identities=21% Similarity=0.322 Sum_probs=175.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 129 (247)
T 3lyl_A 53 GFKARGLVLNISDI--ESIQNFFAEIKAENLAIDILVNNAGIT-RDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMM 129 (247)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHTTCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46789999999999 999999999999999999999999986 667888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++...... .......
T Consensus 130 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~ 204 (247)
T 3lyl_A 130 KKR-WGRIISIGSVVGSAG--NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD--EQKSFIA 204 (247)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH--HHHHHHH
T ss_pred HcC-CeEEEEEcchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH--HHHHHHh
Confidence 876 789999999998743 58889999999999999999999999999999999999999998776432 2333444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|.+++.+|+ |+|+++++|+++.+.+++|+++++|||+++
T Consensus 205 ~~~~~~~~~~~~-dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 205 TKIPSGQIGEPK-DIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp TTSTTCCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 678889999998 999999999999999999999999999976
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=239.64 Aligned_cols=196 Identities=22% Similarity=0.359 Sum_probs=171.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 70 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 146 (267)
T 1vl8_A 70 GVETMAFRCDVSNY--EEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR 146 (267)
T ss_dssp CCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeeccc-ccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSII-GAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~-~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||++||.. +. .+ .++...|+++|+++++|+++++.|++++||++|+|+||++.|++.......+......
T Consensus 147 ~~~-~g~iv~isS~~~~~-~~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~ 223 (267)
T 1vl8_A 147 ESD-NPSIINIGSLTVEE-VT-MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYM 223 (267)
T ss_dssp TCS-SCEEEEECCGGGTC-CC-SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHH
T ss_pred HcC-CcEEEEECCcchhc-cC-CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHH
Confidence 765 68999999988 65 22 5778899999999999999999999999999999999999999876533222222223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++++.+|+ |+|+++++|+++.+++++|+++.+|||+.+
T Consensus 224 ~~~~p~~~~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 266 (267)
T 1vl8_A 224 LKRIPLGRTGVPE-DLKGVAVFLASEEAKYVTGQIIFVDGGWTA 266 (267)
T ss_dssp HHTCTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HhhCCCCCCcCHH-HHHHHHHHHcCccccCCcCCeEEECCCCCC
Confidence 3557888889998 999999999999889999999999999864
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=240.27 Aligned_cols=194 Identities=19% Similarity=0.266 Sum_probs=174.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 62 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 138 (256)
T 3ezl_A 62 GFDFYASEGNVGDW--DSTKQAFDKVKAEVGEIDVLVNNAGIT-RDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMV 138 (256)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHHHHHTCCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeeEEEecCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 667888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|++++++|++++||++++|+||++.|++..... . .......
T Consensus 139 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~-~~~~~~~ 213 (256)
T 3ezl_A 139 ERG-WGRIINISSVNGQKG--QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-P-DVLEKIV 213 (256)
T ss_dssp HHT-CEEEEEECCCCGGGS--CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-H-HHHHHHH
T ss_pred hcC-CCEEEEEcchhhccC--CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC-H-HHHHHHH
Confidence 876 699999999998743 6889999999999999999999999999999999999999999876543 2 2333344
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|++++||+++.+.++||+++.+|||+++
T Consensus 214 ~~~~~~~~~~~~-dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 214 ATIPVRRLGSPD-EIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 678899999998 999999999999999999999999999875
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=241.03 Aligned_cols=197 Identities=27% Similarity=0.395 Sum_probs=170.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 52 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 128 (258)
T 3a28_C 52 DQKAVFVGLDVTDK--ANFDSAIDEAAEKLGGFDVLVNNAGIA-QIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFD 128 (258)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--------c-
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--------G- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--------~- 158 (219)
+++.+|+||++||..+... .++...|+++|+++++|+++++.|++++||++|+|+||++.|++..... .
T Consensus 129 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 206 (258)
T 3a28_C 129 ELGVKGKIINAASIAAIQG--FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKP 206 (258)
T ss_dssp HHTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCC
T ss_pred hcCCCcEEEEECcchhccC--CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCc
Confidence 7652289999999988733 5788999999999999999999999999999999999999999865421 1
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..........|++++.+|+ |+|++++||+++.+++++|+++.+|||+.+
T Consensus 207 ~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 207 IGENFKEYSSSIALGRPSVPE-DVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp TTHHHHHHHTTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred hHHHHHHHHhcCCCCCccCHH-HHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 011122233556888888998 999999999999889999999999999864
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=240.48 Aligned_cols=200 Identities=27% Similarity=0.332 Sum_probs=178.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.++.+++||++|. ++++++++++.+.+|++|++|||||+... ..++.+.+.++|++.+++|+.+++.+++.++|
T Consensus 58 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 135 (266)
T 3oig_A 58 RNDSIILPCDVTND--AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARP 135 (266)
T ss_dssp SCCCEEEECCCSSS--HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CCCceEEeCCCCCH--HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 34799999999999 99999999999999999999999998632 46778899999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+|++ +|+||++||..+... .++...|+++|+|+++|++++++|++++||++++|+||++.|++............
T Consensus 136 ~~~~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~ 210 (266)
T 3oig_A 136 MMTE---GGSIVTLTYLGGELV--MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILK 210 (266)
T ss_dssp GCTT---CEEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHH
T ss_pred hcCC---CceEEEEeccccccc--CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHH
Confidence 9864 589999999998733 68889999999999999999999999999999999999999998776555444445
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
......|++++.+|+ |+|+++++|+++.+.++||+++.+|||++...++.
T Consensus 211 ~~~~~~~~~~~~~p~-dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~ 260 (266)
T 3oig_A 211 DIEERAPLRRTTTPE-EVGDTAAFLFSDMSRGITGENLHVDSGFHITARLE 260 (266)
T ss_dssp HHHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred HHHhcCCCCCCCCHH-HHHHHHHHHcCCchhcCcCCEEEECCCeEEeeecC
Confidence 555778999999998 99999999999989999999999999999887554
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=237.13 Aligned_cols=198 Identities=22% Similarity=0.339 Sum_probs=172.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|++|||||......++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 62 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 62 GLSVTGTVCHVGKA--EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 9999999999999999999999999853356778899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..++.. .++...|+++|++++.|+++++.|++++||++|+|+||++.|++.......+.......
T Consensus 140 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 216 (260)
T 2zat_A 140 KRG-GGSVLIVSSVGAYHP--FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMK 216 (260)
T ss_dssp HTT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHH
T ss_pred HcC-CCEEEEEechhhcCC--CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHH
Confidence 765 689999999998733 57889999999999999999999999999999999999999998754322222223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|+++++|+++.+++++|+++.+|||+...
T Consensus 217 ~~~~~~~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 217 ESLRIRRLGNPE-DCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHHTCSSCBCGG-GGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 557888889998 9999999999998899999999999998653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=240.29 Aligned_cols=194 Identities=26% Similarity=0.426 Sum_probs=169.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+.+|++|++|||||......++.+.+.++|++++++|+.+++++++.++|.|+
T Consensus 55 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (262)
T 1zem_A 55 GVEARSYVCDVTSE--EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI 132 (262)
T ss_dssp TSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999999853456778899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------- 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----------- 156 (219)
+++ .|+||++||..+... .++...|+++|+++++|+++++.|++++|||+|+|+||++.|++....
T Consensus 133 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 209 (262)
T 1zem_A 133 TQN-YGRIVNTASMAGVKG--PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQ 209 (262)
T ss_dssp HHT-CEEEEEECCHHHHSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCT
T ss_pred hcC-CcEEEEEcchhhccC--CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhcccc
Confidence 765 689999999988733 578899999999999999999999999999999999999999986542
Q ss_pred -cc-hHH-HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 157 -VG-QER-AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 157 -~~-~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
.. .+. .........|++++++|+ |+|++++||+++.++++||+++.+|||
T Consensus 210 ~~~~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 210 YFSTDPKVVAQQMIGSVPMRRYGDIN-EIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp TSCSSHHHHHHHHHHTSTTSSCBCGG-GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred ccccCHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 11 122 223333567889999998 999999999999899999999999998
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=244.08 Aligned_cols=192 Identities=24% Similarity=0.330 Sum_probs=170.4
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
..+++|++|. ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|++++
T Consensus 69 ~~~~~Dv~~~--~~~~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~- 144 (266)
T 3uxy_A 69 LHLPGDLREA--AYADGLPGAVAAGLGRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG- 144 (266)
T ss_dssp EECCCCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred hccCcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 4568999999 999999999999999999999999986 567888999999999999999999999999999999876
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----hHHHHHHH
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-----QERAVKLV 166 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~ 166 (219)
.|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++...... .+......
T Consensus 145 ~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 222 (266)
T 3uxy_A 145 GGAIVNVASCWGLRP--GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL 222 (266)
T ss_dssp CEEEEEECCSBTTBC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH
T ss_pred CcEEEEECCHHhCCC--CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHH
Confidence 799999999998743 68889999999999999999999999999999999999999997654221 12222344
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++++.+|+ |+|++++||+++.++++||+++.+|||+.+
T Consensus 223 ~~~~p~~r~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3uxy_A 223 GRTVPLGRIAEPE-DIADVVLFLASDAARYLCGSLVEVNGGKAV 265 (266)
T ss_dssp HTTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence 4678899999998 999999999999999999999999999875
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=238.78 Aligned_cols=196 Identities=23% Similarity=0.302 Sum_probs=165.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 54 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (260)
T 1x1t_A 54 GVKVLYDGADLSKG--EAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMK 130 (260)
T ss_dssp TSCEEEECCCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 557788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------- 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------- 159 (219)
+++ .|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++.|++.......
T Consensus 131 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 207 (260)
T 1x1t_A 131 KQG-FGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVD 207 (260)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred hcC-CCEEEEECcHHhCcC--CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCc
Confidence 765 699999999998733 578899999999999999999999999999999999999999986543210
Q ss_pred -HHHHHHH-HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 -ERAVKLV-REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 -~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+...... ....|++++.+|+ |+|++++||+++.+++++|+++.+|||+.+
T Consensus 208 ~~~~~~~~~~~~~p~~~~~~p~-dva~~~~~l~s~~~~~~tG~~~~vdgG~~~ 259 (260)
T 1x1t_A 208 QETAARELLSEKQPSLQFVTPE-QLGGTAVFLASDAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp -------CHHHHCTTCCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hHHHHHHHhhccCCCCCCcCHH-HHHHHHHHHhChhhcCCCCCEEEECCCccC
Confidence 1111111 2456888888998 999999999998889999999999999864
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-37 Score=239.50 Aligned_cols=201 Identities=25% Similarity=0.331 Sum_probs=161.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 131 (261)
T 3n74_A 54 GDAALAVAADISKE--ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFK 131 (261)
T ss_dssp CTTEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999999864467788889999999999999999999999999998
Q ss_pred hcC---CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHH
Q 027744 88 ESK---AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERA 162 (219)
Q Consensus 88 ~~~---~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~ 162 (219)
+++ ..++||++||..+... .+....|+++|+|+++|+++++.|++++||++++|+||++.|++...... .+..
T Consensus 132 ~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~ 209 (261)
T 3n74_A 132 ENGAKGQECVILNVASTGAGRP--RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI 209 (261)
T ss_dssp HHHHTTCCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------
T ss_pred hcCCCCCCeEEEEeCchhhcCC--CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH
Confidence 752 1478999999998733 67889999999999999999999999999999999999999998775432 2222
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
........|++++.+|+ |+|++++||+++.++++||+++.+|||+++...
T Consensus 210 ~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~~ 259 (261)
T 3n74_A 210 RKKFRDSIPMGRLLKPD-DLAEAAAFLCSPQASMITGVALDVDGGRSIGGR 259 (261)
T ss_dssp -------CTTSSCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred HHHHhhcCCcCCCcCHH-HHHHHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence 33344667889999998 999999999999999999999999999988643
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=239.74 Aligned_cols=198 Identities=20% Similarity=0.230 Sum_probs=167.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC----CCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP----LQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||+......+ .+.+.++|++++++|+.+++.++++++
T Consensus 50 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~ 127 (281)
T 3zv4_A 50 GGNAVGVVGDVRSL--QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACL 127 (281)
T ss_dssp BTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985333333 244567899999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----- 158 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----- 158 (219)
|+|+++ +|+||++||..+... .++...|+++|+|+++|+++++.|+++. ||+|+|+||++.|++......
T Consensus 128 ~~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~ 202 (281)
T 3zv4_A 128 PALVSS--RGSVVFTISNAGFYP--NGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQ 202 (281)
T ss_dssp HHHHHH--TCEEEEECCGGGTSS--SSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC----
T ss_pred HHHHhc--CCeEEEEecchhccC--CCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccc
Confidence 999876 489999999998743 5788999999999999999999999987 999999999999998643211
Q ss_pred ---hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhcc-CCCCcccceEEEecCCccccCC
Q 027744 159 ---QERAVKLVREAAPLHRWLDVKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 159 ---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
............|++|+++|+ |+|++++||+| +.+.++||+++.+|||+++...
T Consensus 203 ~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~ 260 (281)
T 3zv4_A 203 SISSVPLADMLKSVLPIGRMPALE-EYTGAYVFFATRGDSLPATGALLNYDGGMGVRGF 260 (281)
T ss_dssp ----CCHHHHHHHTCTTSSCCCGG-GGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred cccchhHHHHHHhcCCCCCCCCHH-HHHHHHHHhhcccccccccCcEEEECCCCccccc
Confidence 011223444678999999998 99999999999 7888999999999999987754
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=236.93 Aligned_cols=191 Identities=18% Similarity=0.310 Sum_probs=169.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++++|++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++
T Consensus 68 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 144 (260)
T 3un1_A 68 PDIHTVAGDISKP--ETADRIVREGIERFGRIDSLVNNAGVF-LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK 144 (260)
T ss_dssp TTEEEEESCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCH--HHHHHHHHHHHHHCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4689999999999 999999999999999999999999986 5678889999999999999999999999999999998
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+....+..+...|+++|+|+++|+++++.|++++||++|+|+||++.|++..... ......
T Consensus 145 ~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~~~~~~ 218 (260)
T 3un1_A 145 QG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET-----HSTLAG 218 (260)
T ss_dssp TT-CEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG-----HHHHHT
T ss_pred cC-CcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH-----HHHHhc
Confidence 76 799999999887633334567899999999999999999999999999999999999999876421 222336
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..|++++++|+ |+|++++|| ..+++++|+++++|||+.+.
T Consensus 219 ~~p~~r~~~~~-dva~av~~L--~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 219 LHPVGRMGEIR-DVVDAVLYL--EHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp TSTTSSCBCHH-HHHHHHHHH--HHCTTCCSCEEEESTTGGGC
T ss_pred cCCCCCCcCHH-HHHHHHHHh--cccCCCCCcEEEECCCeecc
Confidence 67899999998 999999999 45789999999999998764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=236.96 Aligned_cols=194 Identities=24% Similarity=0.249 Sum_probs=162.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.++++++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|.|+
T Consensus 53 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 129 (249)
T 2ew8_A 53 GRRVLTVKCDVSQP--GDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMK 129 (249)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeecCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc-cccch-HHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP-IAVGQ-ERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~-~~~~~-~~~~~~ 165 (219)
+++ .|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++.. ..... +.....
T Consensus 130 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 206 (249)
T 2ew8_A 130 RNG-WGRIINLTSTTYWLK--IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPN 206 (249)
T ss_dssp HHT-CEEEEEECCGGGGSC--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------C
T ss_pred HcC-CeEEEEEcchhhccC--CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHH
Confidence 875 699999999998733 5788999999999999999999999999999999999999999865 32111 011111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
. . .|++++.+|+ |+|+++++|+++.+++++|+++.+|||++.
T Consensus 207 ~-~-~~~~~~~~p~-dva~~~~~l~s~~~~~~tG~~~~vdGG~~~ 248 (249)
T 2ew8_A 207 M-L-QAIPRLQVPL-DLTGAAAFLASDDASFITGQTLAVDGGMVR 248 (249)
T ss_dssp T-T-SSSCSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred h-h-CccCCCCCHH-HHHHHHHHHcCcccCCCCCcEEEECCCccC
Confidence 1 1 5778888998 999999999999889999999999999764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=240.06 Aligned_cols=195 Identities=27% Similarity=0.369 Sum_probs=169.1
Q ss_pred CcceEEEEecCCccchh-----------------HHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcC----------
Q 027744 8 GQPVEVVGLDMEEDREG-----------------AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG---------- 60 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~-----------------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~---------- 60 (219)
+.++.++++|++|. + +++++++++.+++|++|+||||||+. ...++.+.+
T Consensus 59 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~ 135 (291)
T 1e7w_A 59 PNSAITVQADLSNV--ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGD 135 (291)
T ss_dssp TTCEEEEECCCSSS--CBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC------------
T ss_pred CCeeEEEEeecCCc--ccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCcccccccccc
Confidence 45789999999999 8 99999999999999999999999986 556777888
Q ss_pred ----HHHHHHHHHhhhchHHHHHHHHHHHHHhcCC-----CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHH
Q 027744 61 ----EDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 131 (219)
Q Consensus 61 ----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~ 131 (219)
.++|++++++|+.+++.+++.++|+|++++. .|+||++||..+... .++...|+++|+++++|+++++.
T Consensus 136 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~ 213 (291)
T 1e7w_A 136 REAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAAL 213 (291)
T ss_dssp -HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC--CCCCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987531 489999999998733 68889999999999999999999
Q ss_pred HhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 132 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 132 e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|++++||++|+|+||++.|++ . ... ..........|++ ++.+|+ |+|++++||+++.+.++||+++.+|||+.+
T Consensus 214 e~~~~gI~vn~v~PG~v~T~~-~--~~~-~~~~~~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 214 ELAPLQIRVNGVGPGLSVLVD-D--MPP-AVWEGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp HHGGGTEEEEEEEESSBCCGG-G--SCH-HHHHHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHhcCeEEEEEeeCCccCCc-c--CCH-HHHHHHHhhCCCCCCCCCHH-HHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 999999999999999999998 4 222 2223333556887 888888 999999999999899999999999999976
Q ss_pred cC
Q 027744 211 TR 212 (219)
Q Consensus 211 ~~ 212 (219)
.+
T Consensus 289 ~~ 290 (291)
T 1e7w_A 289 TR 290 (291)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=241.23 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=170.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 63 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 140 (267)
T 1iy8_A 63 DAEVLTTVADVSDE--AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMR 140 (267)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 56789999999999 9999999999999999999999999863326788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc--c-chHHHH-
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--V-GQERAV- 163 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~--~-~~~~~~- 163 (219)
+++ .|+||++||..+... .++...|+++|+++++|+++++.|++++||++|+|+||++.|++.... . ..+...
T Consensus 141 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 217 (267)
T 1iy8_A 141 EQG-SGMVVNTASVGGIRG--IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRK 217 (267)
T ss_dssp HHT-CCEEEEECCGGGTSB--CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHH
T ss_pred HcC-CCEEEEEcchhhccC--CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhh
Confidence 775 699999999988733 578899999999999999999999999999999999999999985432 1 111111
Q ss_pred --HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 164 --KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 164 --~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.......|++++.+|+ |+|+++++|+++.+++++|+++.+|||+.+.
T Consensus 218 ~~~~~~~~~p~~r~~~~~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 218 AAEEFIQVNPSKRYGEAP-EIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp HHHHHHTTCTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred HHHHHhccCCCCCCcCHH-HHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 1233556888888988 9999999999998899999999999998653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=236.46 Aligned_cols=193 Identities=27% Similarity=0.418 Sum_probs=170.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 53 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 129 (246)
T 2uvd_A 53 GSDAIAVRADVANA--EDVTNMVKQTVDVFGQVDILVNNAGVT-KDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMM 129 (246)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 566788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+++++++++++.|++++||++|+|+||++.|++...... .... ...
T Consensus 130 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~~~ 204 (246)
T 2uvd_A 130 RQR-HGRIVNIASVVGVTG--NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE-NIKA-EML 204 (246)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT-THHH-HHH
T ss_pred HcC-CcEEEEECCHHhcCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH-HHHH-HHH
Confidence 765 699999999988633 57889999999999999999999999999999999999999998765322 2222 223
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++++.+|+ |+|+++++|+++..++++|+++.+|||++
T Consensus 205 ~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~tG~~~~vdgG~~ 245 (246)
T 2uvd_A 205 KLIPAAQFGEAQ-DIANAVTFFASDQSKYITGQTLNVDGGMV 245 (246)
T ss_dssp HTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHcCchhcCCCCCEEEECcCcc
Confidence 557888888888 99999999999888999999999999975
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=238.79 Aligned_cols=201 Identities=22% Similarity=0.264 Sum_probs=168.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccC-CCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE-GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.+++||++|. ++++++++++.+.++++|++|||||.. ....++.+.+.++|++++++|+.+++.+++.++|+|
T Consensus 56 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 133 (264)
T 3i4f_A 56 EERLQFVQADVTKK--EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVM 133 (264)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 45799999999999 999999999999999999999999942 255678889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .|+||++||..+....+.++...|+++|+|+++|+++++.|++++||++++|+||++.|++...... ......
T Consensus 134 ~~~~-~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~ 210 (264)
T 3i4f_A 134 RKQN-FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ--EARQLK 210 (264)
T ss_dssp HHHT-CEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH--HHHHC-
T ss_pred HhcC-CCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH--HHHHHH
Confidence 8876 7999999998433122257789999999999999999999999999999999999999998766432 223333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
....|++++.+|+ |+|+++++|+++...++||+++.+|||++....+
T Consensus 211 ~~~~p~~r~~~~~-dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~~ 257 (264)
T 3i4f_A 211 EHNTPIGRSGTGE-DIARTISFLCEDDSDMITGTIIEVTGAVDVIHRE 257 (264)
T ss_dssp -------CCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC--
T ss_pred hhcCCCCCCcCHH-HHHHHHHHHcCcccCCCCCcEEEEcCceeeccCC
Confidence 3567888989998 9999999999998999999999999999887654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=240.25 Aligned_cols=194 Identities=26% Similarity=0.355 Sum_probs=162.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|+ ++++++++++.+++|++|+||||||+. .... +.++|++++++|+.++++++++++|+|+
T Consensus 73 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 145 (278)
T 3sx2_A 73 GSRIVARQADVRDR--ESLSAALQAGLDELGRLDIVVANAGIA-PMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLV 145 (278)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHCCCCEEEECCCCC-CCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 3222 5899999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccC--CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERG--LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~--~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+++.+|+||++||..+.... +.++...|+++|+|+++|+++++.|++++||++|+|+||+|.|++.......+.....
T Consensus 146 ~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~ 225 (278)
T 3sx2_A 146 KQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKM 225 (278)
T ss_dssp HHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHH
T ss_pred hCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhc
Confidence 86546899999999886321 1156678999999999999999999999999999999999999998653322222111
Q ss_pred H---------HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 V---------REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~---------~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
. ....| +++.+|+ |+|++++||+++.++++||+++.+|||+.+
T Consensus 226 ~~~~~~~~~~~~~~p-~~~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 277 (278)
T 3sx2_A 226 AAATDTPGAMGNAMP-VEVLAPE-DVANAVAWLVSDQARYITGVTLPVDAGFLN 277 (278)
T ss_dssp HHHCC--CTTSCSSS-CSSBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred cchhhhhhhhhhhcC-cCcCCHH-HHHHHHHHHhCcccccccCCEEeECCCccc
Confidence 1 11233 5677777 999999999999999999999999999864
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=238.38 Aligned_cols=197 Identities=24% Similarity=0.302 Sum_probs=170.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 50 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 126 (256)
T 1geg_A 50 GGHAVAVKVDVSDR--DQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK 126 (256)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHTTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 556788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++..|+||++||..+... .++...|+++|+++++|+++++.|++++||++|+|+||++.|++......
T Consensus 127 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 204 (256)
T 1geg_A 127 KEGHGGKIINACSQAGHVG--NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 204 (256)
T ss_dssp HHTSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC
T ss_pred hcCCCCEEEEECchhhcCC--CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCC
Confidence 7642489999999988733 57889999999999999999999999999999999999999997543210
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+..........|++++.+|+ |+|+++++|+++.+++++|+++.+|||+.+
T Consensus 205 ~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 255 (256)
T 1geg_A 205 LGYGTAEFAKRITLGRLSEPE-DVAACVSYLASPDSDYMTGQSLLIDGGMVF 255 (256)
T ss_dssp TTHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred hHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence 111122233456888888988 999999999999889999999999999864
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=238.62 Aligned_cols=194 Identities=22% Similarity=0.294 Sum_probs=159.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC----CCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP----LQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.+++++++|++|. ++++++++++.+++|++|++|||||.. ....+ .+.+.++|++++++|+.+++++++++.
T Consensus 52 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 128 (257)
T 3tpc_A 52 GAAVRFRNADVTNE--ADATAALAFAKQEFGHVHGLVNCAGTA-PGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAA 128 (257)
T ss_dssp ---CEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 33333 367899999999999999999999999
Q ss_pred HHHHhc-----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 84 RRMKES-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 84 ~~l~~~-----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
|+|+++ +..|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++......
T Consensus 129 ~~m~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 206 (257)
T 3tpc_A 129 EVMSQGEPDADGERGVIVNTASIAAFDG--QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ 206 (257)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------
T ss_pred HHHHhccccCCCCCeEEEEEechhhccC--CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH
Confidence 999874 23689999999998743 57889999999999999999999999999999999999999998765432
Q ss_pred hHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..........|+ +++..|+ |+|++++||+++ +++||+++.+|||+++.
T Consensus 207 --~~~~~~~~~~p~~~r~~~~~-dva~~v~~l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 207 --DVQDALAASVPFPPRLGRAE-EYAALVKHICEN--TMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ---------CCSSSSCSCBCHH-HHHHHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred --HHHHHHHhcCCCCCCCCCHH-HHHHHHHHHccc--CCcCCcEEEECCCccCC
Confidence 222333356677 8888888 999999999975 78999999999999875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=237.09 Aligned_cols=196 Identities=27% Similarity=0.410 Sum_probs=171.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++++|++|+ ++++++++++.+++ +++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 133 (260)
T 2ae2_A 57 GFKVEASVCDLSSR--SERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 133 (260)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45789999999999 99999999999999 8999999999986 56778889999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH--
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-- 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-- 164 (219)
++++ .|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++.......+....
T Consensus 134 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 210 (260)
T 2ae2_A 134 KASE-RGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENL 210 (260)
T ss_dssp HHTS-SEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHH
T ss_pred HhcC-CcEEEEEcchhhccC--CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHH
Confidence 8765 689999999988633 57889999999999999999999999999999999999999997654322222111
Q ss_pred -HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 -LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 -~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|++++.+|+ |+|+++++|+++.+.+++|+++.+|||+.+
T Consensus 211 ~~~~~~~~~~~~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 211 NKLIDRCALRRMGEPK-ELAAMVAFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp HHHHHTSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhcCCCCCCCCHH-HHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 233557888888988 999999999998888999999999999865
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=240.30 Aligned_cols=197 Identities=20% Similarity=0.235 Sum_probs=170.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC---CCCCC-cCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
++.+++||++|. ++++++++++.+++|++|++|||||+.... .++.+ .+.++|++++++|+.+++.+++.++|+
T Consensus 65 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (271)
T 3ek2_A 65 SELVFPCDVADD--AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPM 142 (271)
T ss_dssp CCCEEECCTTCH--HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGG
T ss_pred CcEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 578999999999 999999999999999999999999986321 55555 899999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++.......+.....
T Consensus 143 ~~~---~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~ 217 (271)
T 3ek2_A 143 LSD---DASLLTLSYLGAERA--IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDF 217 (271)
T ss_dssp EEE---EEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHH
T ss_pred hcc---CceEEEEeccccccC--CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHH
Confidence 874 589999999998733 688899999999999999999999999999999999999999998765544455555
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
.....|++++.+|+ |+|++++||+++.+.++||+++.+|||+++..+.
T Consensus 218 ~~~~~~~~~~~~pe-dva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~ 265 (271)
T 3ek2_A 218 VESNSPLKRNVTIE-QVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGG 265 (271)
T ss_dssp HHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCC
T ss_pred HHhcCCcCCCCCHH-HHHHHHHHHcCcccCCeeeeEEEECCCeeeehhh
Confidence 65778999999998 9999999999998999999999999999887544
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=236.08 Aligned_cols=196 Identities=22% Similarity=0.331 Sum_probs=170.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (263)
T 3ai3_A 56 GVRVLEVAVDVATP--EGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMR 132 (263)
T ss_dssp CCCEEEEECCTTSH--HHHHHHHHHHHHHHSSCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++ .|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++......
T Consensus 133 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 209 (263)
T 3ai3_A 133 ARG-GGAIIHNASICAVQP--LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGD 209 (263)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCC
T ss_pred HcC-CcEEEEECchhhcCC--CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCc
Confidence 765 699999999998733 57889999999999999999999999999999999999999997654211
Q ss_pred hHHHHHHHHhh-cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVREA-APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+......... .|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~ 261 (263)
T 3ai3_A 210 WKGYLQSVADEHAPIKRFASPE-ELANFFVFLCSERATYSVGSAYFVDGGMLK 261 (263)
T ss_dssp HHHHHHHHHHHHCTTCSCBCHH-HHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence 11111222234 7888889998 999999999999889999999999999865
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=238.60 Aligned_cols=197 Identities=23% Similarity=0.290 Sum_probs=175.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCC-cCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.++.+++||++|. ++++++++++.+.++++|++|||||+... ..++.+ .+.++|++++++|+.+++.+++++++
T Consensus 75 ~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 152 (280)
T 3nrc_A 75 NPAAVLPCDVISD--QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRS 152 (280)
T ss_dssp CCSEEEECCTTCH--HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeecCCH--HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999 99999999999999999999999998632 144555 88999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.|+++ +|+||++||..+... .++...|+++|+|++.|+++++.|++++||++++|+||++.|++.......+....
T Consensus 153 ~~~~~--~g~iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~ 228 (280)
T 3nrc_A 153 MMKNR--NASMVALTYIGAEKA--MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLD 228 (280)
T ss_dssp HHTTT--TCEEEEEECGGGTSC--CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHH
T ss_pred HhhcC--CCeEEEEeccccccC--CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHH
Confidence 99865 599999999998733 68889999999999999999999999999999999999999999877655455555
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
......|++++.+|+ |+|+++++|+++..+++||+++.+|||+++..
T Consensus 229 ~~~~~~p~~~~~~pe-dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~ 275 (280)
T 3nrc_A 229 YNAMVSPLKKNVDIM-EVGNTVAFLCSDMATGITGEVVHVDAGYHCVS 275 (280)
T ss_dssp HHHHHSTTCSCCCHH-HHHHHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHhcCCCCCCCCHH-HHHHHHHHHhCcccCCcCCcEEEECCCccccC
Confidence 555778999999998 99999999999989999999999999998764
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=235.12 Aligned_cols=193 Identities=21% Similarity=0.317 Sum_probs=154.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++.+|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++++
T Consensus 48 ~~~~~~D~~d~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 124 (250)
T 2fwm_X 48 FATEVMDVADA--AQVAQVCQRLLAETERLDALVNAAGIL-RMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR 124 (250)
T ss_dssp SEEEECCTTCH--HHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC
Confidence 78899999999 999999999999999999999999986 567888899999999999999999999999999998876
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH-HHHh-
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVRE- 168 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~- 168 (219)
.|+||++||..+..+ .++...|+++|++++.|+++++.|++++||++|+|+||++.|++.......+.... ....
T Consensus 125 -~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 201 (250)
T 2fwm_X 125 -GGAIVTVASDAAHTP--RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF 201 (250)
T ss_dssp -CCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------
T ss_pred -CCEEEEECchhhCCC--CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhh
Confidence 799999999998733 57889999999999999999999999999999999999999998654321111111 1112
Q ss_pred ------hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 ------AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ------~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..|++++.+|+ |+|+++++|+++.+++++|+++.+|||+++
T Consensus 202 ~~~~~~~~p~~~~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 248 (250)
T 2fwm_X 202 GEQFKLGIPLGKIARPQ-EIANTILFLASDLASHITLQDIVVDGGSTL 248 (250)
T ss_dssp --------------CHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred hhcccccCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence 45778888888 999999999999889999999999999865
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=238.82 Aligned_cols=194 Identities=24% Similarity=0.345 Sum_probs=168.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||+. ...++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 78 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 154 (271)
T 4iin_A 78 GYKAAVIKFDAASE--SDFIEAIQTIVQSDGGLSYLVNNAGVV-RDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMS 154 (271)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 46789999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|++.++++++.|++++||++++|+||++.|++...... .......
T Consensus 155 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~ 229 (271)
T 4iin_A 155 KSR-FGSVVNVASIIGERG--NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD--ELKADYV 229 (271)
T ss_dssp HHT-CEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CG
T ss_pred hcC-CCEEEEEechhhcCC--CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH--HHHHHHH
Confidence 876 699999999998743 58889999999999999999999999999999999999999998765432 2223334
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|+++++|+++.+.++||+++.+|||+++
T Consensus 230 ~~~~~~~~~~p~-dvA~~i~~l~s~~~~~itG~~i~vdGG~~~ 271 (271)
T 4iin_A 230 KNIPLNRLGSAK-EVAEAVAFLLSDHSSYITGETLKVNGGLYM 271 (271)
T ss_dssp GGCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred hcCCcCCCcCHH-HHHHHHHHHhCCCcCCCcCCEEEeCCCeeC
Confidence 667888988988 999999999999999999999999999874
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=237.91 Aligned_cols=193 Identities=18% Similarity=0.268 Sum_probs=164.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+..+.++.+|++++ +++++++ ++++++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 60 ~~~~~~~~~D~~~~--~~~~~~~----~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 132 (267)
T 3t4x_A 60 DAILQPVVADLGTE--QGCQDVI----EKYPKVDILINNLGIF-EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMI 132 (267)
T ss_dssp TCEEEEEECCTTSH--HHHHHHH----HHCCCCSEEEECCCCC-CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCH--HHHHHHH----HhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56788999999998 7776655 4579999999999986 567888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---------c
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---------G 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---------~ 158 (219)
+++ .|+||++||..+..+ .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... .
T Consensus 133 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 209 (267)
T 3t4x_A 133 ERK-EGRVIFIASEAAIMP--SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLT 209 (267)
T ss_dssp HTT-EEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCC
T ss_pred hCC-CCEEEEEcchhhccC--CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCC
Confidence 876 799999999999743 6889999999999999999999999999999999999999998654321 1
Q ss_pred -hHHHHHHHH---hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 -QERAVKLVR---EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 -~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+....... ...|++++++|+ |+|++++||+|+.++++||+++.+|||+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~r~~~pe-dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 210 IEEAEKRFMKENRPTSIIQRLIRPE-EIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHHHHHHHHCTTCSSCSCBCTH-HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHHHHHhhccCCcccccCccCHH-HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 112222221 224689999998 9999999999999999999999999998654
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=231.98 Aligned_cols=191 Identities=27% Similarity=0.422 Sum_probs=168.5
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
++++++|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|++++
T Consensus 51 ~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lvn~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~ 127 (245)
T 1uls_A 51 AHPVVMDVADP--ASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN 127 (245)
T ss_dssp CEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 78899999999 999999999999999999999999986 567788899999999999999999999999999998765
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
.|+||++||.. . .+ .++...|+++|+++++|+++++.|++++||++|+|+||++.|++.... ..+.. .......
T Consensus 128 -~g~iv~isS~~-~-~~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~-~~~~~~~ 201 (245)
T 1uls_A 128 -PGSIVLTASRV-Y-LG-NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEKVR-EKAIAAT 201 (245)
T ss_dssp -CEEEEEECCGG-G-GC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHHHH-HHHHHTC
T ss_pred -CCEEEEEccch-h-cC-CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHHHH-HHHHhhC
Confidence 69999999988 5 33 577899999999999999999999999999999999999999987643 22222 2233556
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+.
T Consensus 202 p~~~~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 241 (245)
T 1uls_A 202 PLGRAGKPL-EVAYAALFLLSDESSFITGQVLFVDGGRTIG 241 (245)
T ss_dssp TTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred CCCCCcCHH-HHHHHHHHHhCchhcCCcCCEEEECCCcccC
Confidence 888888888 9999999999998899999999999998754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=234.75 Aligned_cols=192 Identities=22% Similarity=0.319 Sum_probs=171.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|.
T Consensus 75 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 151 (267)
T 4iiu_A 75 GGNGRLLSFDVANR--EQCREVLEHEIAQHGAWYGVVSNAGIA-RDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMI 151 (267)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCccEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 46789999999999 999999999999999999999999986 567888899999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+....|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++.... . .......
T Consensus 152 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~-~~~~~~~ 226 (267)
T 4iiu_A 152 GARQGGRIITLSSVSGVMG--NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--E-SALKEAM 226 (267)
T ss_dssp HHTSCEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--H-HHHHHHH
T ss_pred hcCCCcEEEEEcchHhccC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--H-HHHHHHH
Confidence 4444799999999998743 588899999999999999999999999999999999999999988654 2 2223333
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...|++++.+|+ |+|++++||+++.++++||+++.+|||+
T Consensus 227 ~~~p~~~~~~~e-dva~~~~~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 227 SMIPMKRMGQAE-EVAGLASYLMSDIAGYVTRQVISINGGM 266 (267)
T ss_dssp HTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence 678899989988 9999999999999999999999999996
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=236.13 Aligned_cols=192 Identities=21% Similarity=0.293 Sum_probs=168.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+++
T Consensus 78 ~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 78 DCQAIPADLSSE--AGARRLAQALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp CEEECCCCTTSH--HHHHHHHHHHHHHCSCCSEEEECCCCC-CCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 788999999999 999999999999999999999999986 55778889999999999999999999999999999876
Q ss_pred CCC----CeEEEeecccccccCCCCCcc-hhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 90 KAG----GSIVFLTSIIGAERGLYPGAA-AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 90 ~~~----g~iv~iss~~~~~~~~~~~~~-~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+ . |+||++||..+... .+... .|+++|++++.|+++++.|++++||++|+|+||++.|++....... ...
T Consensus 155 ~-~~~~~g~iV~isS~~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~ 229 (276)
T 2b4q_A 155 A-SAENPARVINIGSVAGISA--MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQA 229 (276)
T ss_dssp C-CSSSCEEEEEECCGGGTCC--CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHH
T ss_pred c-CCCCCCEEEEECCHHHcCC--CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHH
Confidence 5 4 89999999988733 46667 9999999999999999999999999999999999999987643211 112
Q ss_pred HHHh--hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVRE--AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~--~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.... ..|++++.+|+ |+|+++++|+++.+++++|+++.+|||+.+
T Consensus 230 ~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~L 276 (276)
T 2b4q_A 230 LEADSASIPMGRWGRPE-EMAALAISLAGTAGAYMTGNVIPIDGGFHL 276 (276)
T ss_dssp HHHHHHTSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhhcCCCCCCcCCHH-HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence 2223 57888989988 999999999998888999999999999854
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=239.91 Aligned_cols=196 Identities=21% Similarity=0.263 Sum_probs=168.4
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++++||++|+ ++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|
T Consensus 85 ~~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 162 (287)
T 3rku_A 85 PNAKVHVAQLDITQA--EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIF 162 (287)
T ss_dssp TTCEEEEEECCTTCG--GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999 999999999999999999999999986446788899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~ 164 (219)
++++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||+|+|++...... .+....
T Consensus 163 ~~~~-~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~ 239 (287)
T 3rku_A 163 QAKN-SGDIVNLGSIAGRDA--YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKN 239 (287)
T ss_dssp HHHT-CCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHH
T ss_pred HhcC-CCeEEEECChhhcCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHH
Confidence 8876 799999999999733 68889999999999999999999999999999999999999997543221 122222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
......| .+|+ |+|++++||+++...+++|+++.+|||+..+.
T Consensus 240 ~~~~~~p----~~pe-dvA~~v~~l~s~~~~~i~g~~i~v~~g~~~p~ 282 (287)
T 3rku_A 240 VYKDTTP----LMAD-DVADLIVYATSRKQNTVIADTLIFPTNQASPH 282 (287)
T ss_dssp HHTTSCC----EEHH-HHHHHHHHHHTSCTTEEEEEEEEEETTEEETT
T ss_pred hhcccCC----CCHH-HHHHHHHHHhCCCCCeEecceEEeeCCCCCCc
Confidence 2212222 3555 99999999999999999999999999997654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=235.74 Aligned_cols=194 Identities=25% Similarity=0.371 Sum_probs=136.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC--CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.+++++++|++|+ ++++++++++.+.++++|++|||||+.. ...++.+.+.++|++++++|+.+++.+++.++|.
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 134 (253)
T 3qiv_A 57 GGTAISVAVDVSDP--ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKK 134 (253)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 56789999999999 9999999999999999999999999842 4456778999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
|++++ .|+||++||..++ ++...|+++|+|+++|+++++.|++++||++++|+||++.|++.......+... .
T Consensus 135 ~~~~~-~g~iv~isS~~~~-----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~ 207 (253)
T 3qiv_A 135 MTKRG-GGAIVNQSSTAAW-----LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD-D 207 (253)
T ss_dssp HHHHT-CEEEEEECC----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------
T ss_pred HHhcC-CCEEEEECCcccc-----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH-H
Confidence 98876 7999999998875 456789999999999999999999999999999999999999876644333322 3
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....|++++.+|+ |+|+++++|+++...+++|+++++|||+.+.
T Consensus 208 ~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 208 IVKGLPLSRMGTPD-DLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp ------------CC-HHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred HhccCCCCCCCCHH-HHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 33667888888998 9999999999998999999999999998764
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=233.26 Aligned_cols=186 Identities=19% Similarity=0.229 Sum_probs=161.9
Q ss_pred cceEEEEecC--CccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl--~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.++.++.+|+ +|. ++++++++++.+++|++|++|||||+.....++.+.++++|++++++|+.+++.++++++|+|
T Consensus 62 ~~~~~~~~D~~~~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m 139 (252)
T 3f1l_A 62 RQPQWFILDLLTCTS--ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLL 139 (252)
T ss_dssp CCCEEEECCTTTCCH--HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEEecccCCH--HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3788999999 888 999999999999999999999999986566788899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .|+||++||..+... .++...|+++|+|+++|+++++.|+++. ||+|+|+||++.|++.....+
T Consensus 140 ~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~-------- 207 (252)
T 3f1l_A 140 LKSD-AGSLVFTSSSVGRQG--RANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFP-------- 207 (252)
T ss_dssp HTSS-SCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCT--------
T ss_pred HHCC-CCEEEEECChhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCC--------
Confidence 8876 799999999998733 6888999999999999999999999887 999999999999986543211
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+..++.+|+ |+|++++||+++.++++||+++.+|||+...
T Consensus 208 --~~~~~~~~~p~-dva~~~~~L~s~~~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 208 --TEDPQKLKTPA-DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp --TCCGGGSBCTG-GGHHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred --ccchhccCCHH-HHHHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence 12234567787 9999999999999999999999999998643
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-36 Score=233.83 Aligned_cols=196 Identities=19% Similarity=0.260 Sum_probs=169.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 50 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 126 (255)
T 2q2v_A 50 GVKAVHHPADLSDV--AQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMR 126 (255)
T ss_dssp SCCEEEECCCTTSH--HHHHHHHHHHHHHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHH---H
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QER---A 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~---~ 162 (219)
+++ .|+||++||..+... .++...|+++|+++++|+++++.|++++||++|+|+||++.|++...... .+. .
T Consensus 127 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 203 (255)
T 2q2v_A 127 ARN-WGRIINIASVHGLVG--STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDP 203 (255)
T ss_dssp HTT-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCH
T ss_pred HcC-CcEEEEEcCchhccC--CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccch
Confidence 865 689999999988733 57889999999999999999999999999999999999999997653211 111 1
Q ss_pred ----HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 ----VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........|++++.+|+ |+|+++++|+++..++++|+++.+|||+.+
T Consensus 204 ~~~~~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~ 254 (255)
T 2q2v_A 204 LQAQHDLLAEKQPSLAFVTPE-HLGELVLFLCSEAGSQVRGAAWNVDGGWLA 254 (255)
T ss_dssp HHHHHHHHTTTCTTCCCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCCccCCCCCCEEEECCCccC
Confidence 11112456788888888 999999999998888999999999999864
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-37 Score=236.83 Aligned_cols=192 Identities=24% Similarity=0.342 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++++|++|. ++++++++.+. ++++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 43 ~~~~~~~~~Dv~~~--~~v~~~~~~~~--~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 117 (244)
T 4e4y_A 43 AENLKFIKADLTKQ--QDITNVLDIIK--NVSFDGIFLNAGIL-IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLK 117 (244)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHTT--TCCEEEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEE
T ss_pred cccceEEecCcCCH--HHHHHHHHHHH--hCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 45678999999999 99999996554 68999999999986 567888999999999999999999999999999986
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH-------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE------- 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------- 160 (219)
+ +|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++........
T Consensus 118 ~---~g~iv~~sS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 192 (244)
T 4e4y_A 118 V---GASIVFNGSDQCFIA--KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGIS 192 (244)
T ss_dssp E---EEEEEEECCGGGTCC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCC
T ss_pred c---CcEEEEECCHHHccC--CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCC
Confidence 5 379999999998733 6888999999999999999999999999999999999999999876533211
Q ss_pred --HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 --RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..........|++++.+|+ |+|++++||+++.+.++||+++.+|||+++
T Consensus 193 ~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 243 (244)
T 4e4y_A 193 FDEAQKQEEKEFPLNRIAQPQ-EIAELVIFLLSDKSKFMTGGLIPIDGGYTA 243 (244)
T ss_dssp HHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHhhcCCCCCCcCHH-HHHHHHHHHhcCccccccCCeEeECCCccC
Confidence 1233344667889999998 999999999999999999999999999875
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=235.44 Aligned_cols=196 Identities=21% Similarity=0.300 Sum_probs=161.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 75 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 152 (272)
T 4e3z_A 75 GGEAVAIPGDVGNA--ADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMS 152 (272)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 46789999999999 9999999999999999999999999864457888899999999999999999999999999998
Q ss_pred hc--CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ES--KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~--~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+. +..|+||++||..+.... .+.+..|+++|+|+++|++++++|++++||++++|+||++.|++.......+.. ..
T Consensus 153 ~~~~~~~g~iv~isS~~~~~~~-~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~ 230 (272)
T 4e3z_A 153 RLYSGQGGAIVNVSSMAAILGS-ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRA-RE 230 (272)
T ss_dssp GGGTCCCEEEEEECCTHHHHCC-TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------
T ss_pred HhccCCCCEEEEEcchHhccCC-CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHH-HH
Confidence 73 226899999999987332 346788999999999999999999999999999999999999987653222222 22
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.....|++++.+|+ |+|+++++|+++...+++|+++++|||+
T Consensus 231 ~~~~~~~~~~~~~e-dvA~~i~~l~s~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 231 MAPSVPMQRAGMPE-EVADAILYLLSPSASYVTGSILNVSGGR 272 (272)
T ss_dssp ---CCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HhhcCCcCCCcCHH-HHHHHHHHHhCCccccccCCEEeecCCC
Confidence 33567888888888 9999999999999999999999999995
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=235.71 Aligned_cols=194 Identities=22% Similarity=0.313 Sum_probs=174.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC------CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG------NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.++.++.+|++|. ++++.+++++.+.++ ++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 132 (255)
T 3icc_A 56 GGSAFSIGANLESL--HGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQ 132 (255)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCceEEEecCcCCH--HHHHHHHHHHHHHhcccccCCcccEEEECCCCC-CCCChhhCCHHHHHHHHhhhchHHHHHHHH
Confidence 55788999999999 999999999988774 499999999985 667788899999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 82 VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 82 ~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
++|+|++ +|+||++||..+... .+....|+++|+|+++|+++++.|++++||++++|+||++.|++.......+.
T Consensus 133 ~~~~~~~---~~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~ 207 (255)
T 3icc_A 133 ALSRLRD---NSRIINISSAATRIS--LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM 207 (255)
T ss_dssp HTTTEEE---EEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH
T ss_pred HHHhhCC---CCEEEEeCChhhccC--CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH
Confidence 9999843 589999999998733 68899999999999999999999999999999999999999999887766666
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.........+++++.+|+ |+|++++||+++.++++||+++.+|||+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~-dva~~~~~l~s~~~~~~tG~~i~vdgG~~l 255 (255)
T 3icc_A 208 MKQYATTISAFNRLGEVE-DIADTAAFLASPDSRWVTGQLIDVSGGSCL 255 (255)
T ss_dssp HHHHHHHTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred HHHhhhccCCcCCCCCHH-HHHHHHHHHhCcccCCccCCEEEecCCeeC
Confidence 666666778899999998 999999999999999999999999999864
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=237.59 Aligned_cols=195 Identities=27% Similarity=0.368 Sum_probs=168.4
Q ss_pred CcceEEEEecCCccchh-----------------HHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcC----------
Q 027744 8 GQPVEVVGLDMEEDREG-----------------AFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG---------- 60 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~-----------------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~---------- 60 (219)
+.++.++++|++|. + +++++++++.+.+|++|+||||||+. ...++.+.+
T Consensus 96 ~~~~~~~~~Dl~d~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~e~~~~~ 172 (328)
T 2qhx_A 96 PNSAITVQADLSNV--ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGD 172 (328)
T ss_dssp TTCEEEEECCCSSS--CBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCC------------
T ss_pred CCeEEEEEeeCCCc--hhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhcCcccccccccc
Confidence 45789999999999 8 99999999999999999999999986 556777788
Q ss_pred ----HHHHHHHHHhhhchHHHHHHHHHHHHHhcCC-----CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHH
Q 027744 61 ----EDEFKKLVKINFVAPWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 131 (219)
Q Consensus 61 ----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~ 131 (219)
.++|++++++|+.+++.+++.++|.|++++. .|+||++||..+... .++...|+++|++++.|+++++.
T Consensus 173 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~ 250 (328)
T 2qhx_A 173 REAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAAL 250 (328)
T ss_dssp -CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987531 489999999998733 57889999999999999999999
Q ss_pred HhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 132 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 132 e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|++++||++|+|+||++.|++ .. . .+. ........|++ ++.+|+ |+|++++||+++.+.++||+++.+|||+.+
T Consensus 251 el~~~gIrvn~v~PG~v~T~~-~~-~-~~~-~~~~~~~~p~~~r~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 251 ELAPLQIRVNGVGPGLSVLVD-DM-P-PAV-WEGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp HHGGGTEEEEEEEESSBSCCC-CS-C-HHH-HHHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhhcCcEEEEEecCcccCCc-cc-c-HHH-HHHHHhhCCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 999999999999999999998 33 2 222 22233557888 888888 999999999999889999999999999876
Q ss_pred cC
Q 027744 211 TR 212 (219)
Q Consensus 211 ~~ 212 (219)
.+
T Consensus 326 ~~ 327 (328)
T 2qhx_A 326 TR 327 (328)
T ss_dssp CC
T ss_pred Cc
Confidence 54
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=231.50 Aligned_cols=187 Identities=19% Similarity=0.211 Sum_probs=157.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|+ ++++++++++.+.+|++|+||||||+. .... .+.++++|++++++|+.++++++++++|+|+++
T Consensus 72 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 147 (260)
T 3gem_A 72 GAVALYGDFSCE--TGIMAFIDLLKTQTSSLRAVVHNASEW-LAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS 147 (260)
T ss_dssp TCEEEECCTTSH--HHHHHHHHHHHHHCSCCSEEEECCCCC-CCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred CCeEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcc-CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 378899999999 999999999999999999999999986 3333 567889999999999999999999999999987
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .|+||++||..+... .++...|+++|+|+++|+++++.|+++ +||+|+|+||++.|++... ..........
T Consensus 148 ~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~----~~~~~~~~~~ 219 (260)
T 3gem_A 148 E-VADIVHISDDVTRKG--SSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD----AAYRANALAK 219 (260)
T ss_dssp S-SCEEEEECCGGGGTC--CSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-------------------
T ss_pred C-CcEEEEECChhhcCC--CCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC----HHHHHHHHhc
Confidence 6 699999999998733 678899999999999999999999998 6999999999999987542 1122223356
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.|++++++|+ |+|++++||+ .++++||+++.+|||+++.
T Consensus 220 ~p~~r~~~~e-dva~~v~~L~--~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 220 SALGIEPGAE-VIYQSLRYLL--DSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCSCCCCCTH-HHHHHHHHHH--HCSSCCSCEEEESTTTTTC
T ss_pred CCCCCCCCHH-HHHHHHHHHh--hCCCCCCCEEEECCCcccC
Confidence 7889999998 9999999999 4789999999999999875
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-37 Score=237.37 Aligned_cols=194 Identities=23% Similarity=0.358 Sum_probs=159.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.++.++++|++|. ++++++++.+.+ +|++|++|||||+... ..+..+.+.++|++++++|+.+++.++++++|
T Consensus 51 ~~~~~~~~~D~~~~--~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 127 (257)
T 3tl3_A 51 GDRARFAAADVTDE--AAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAE 127 (257)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 45789999999999 999999998877 8999999999997521 11223578999999999999999999999999
Q ss_pred HHHhc-------CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 85 RMKES-------KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 85 ~l~~~-------~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
+|++. ...|+||++||..+... .+++..|+++|+|+++|+++++.|++++|||+|+|+||+++|++.....
T Consensus 128 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 205 (257)
T 3tl3_A 128 RIAKTEPVGPNAEERGVIINTASVAAFDG--QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP 205 (257)
T ss_dssp HHTTSCCC--CCCCSEEEEEECCCC--CC--HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C
T ss_pred HHHHhcccccccCCCcEEEEEcchhhcCC--CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc
Confidence 99872 22689999999998733 5678899999999999999999999999999999999999999987642
Q ss_pred chHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+ .........|. +++.+|+ |+|++++||+++ +++||+++.+|||+++.
T Consensus 206 -~~-~~~~~~~~~~~~~r~~~p~-dva~~v~~l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 206 -EE-ARASLGKQVPHPSRLGNPD-EYGALAVHIIEN--PMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp -HH-HHHHHHHTSSSSCSCBCHH-HHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred -HH-HHHHHHhcCCCCCCccCHH-HHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence 22 23333356777 8888988 999999999985 79999999999999765
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-36 Score=232.26 Aligned_cols=200 Identities=20% Similarity=0.284 Sum_probs=173.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 45 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 121 (264)
T 2dtx_A 45 EAKYDHIECDVTNP--DQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMI 121 (264)
T ss_dssp SCSSEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45688999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc------chH-
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV------GQE- 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~------~~~- 160 (219)
+++ .|+||++||..+... .++...|+++|++++.|+++++.|+++. |++|+|+||++.|++..... ...
T Consensus 122 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~ 197 (264)
T 2dtx_A 122 RSR-DPSIVNISSVQASII--TKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMR 197 (264)
T ss_dssp TSS-SCEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHH
T ss_pred HcC-CcEEEEECCchhccC--CCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchh
Confidence 765 699999999988733 5788999999999999999999999988 99999999999998765421 110
Q ss_pred --HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 161 --RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
..........|++++.+|+ |+|+++++|+++..++++|+++.+|||+.+..|..
T Consensus 198 ~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~ 253 (264)
T 2dtx_A 198 IEKKISEWGHEHPMQRIGKPQ-EVASAVAFLASREASFITGTCLYVDGGLSIRAPIS 253 (264)
T ss_dssp HHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred hHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCCCCcEEEECCCcccCCCCC
Confidence 1122223456888888988 99999999999888899999999999998776643
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=234.38 Aligned_cols=194 Identities=24% Similarity=0.346 Sum_probs=165.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|+ ++++++++++.+++| +|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|++
T Consensus 58 ~~~~~~~~D~~~~--~~v~~~~~~~~~~~g-id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 133 (260)
T 2z1n_A 58 AQVDIVAGDIREP--GDIDRLFEKARDLGG-ADILVYSTGGP-RPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVE 133 (260)
T ss_dssp CCEEEEECCTTCH--HHHHHHHHHHHHTTC-CSEEEECCCCC-CCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCCH--HHHHHHHHHHHHhcC-CCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3789999999999 999999999999999 99999999985 5667888999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc---------cch
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---------VGQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~---------~~~ 159 (219)
++ .|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++.... ...
T Consensus 134 ~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 210 (260)
T 2z1n_A 134 KG-WGRMVYIGSVTLLRP--WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITV 210 (260)
T ss_dssp HT-CEEEEEECCGGGTSC--CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------
T ss_pred cC-CcEEEEECchhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcH
Confidence 75 699999999998733 578899999999999999999999999999999999999999987621 111
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..........|++++.+|+ |+|+++++|+++.+++++|+++.+|||+++
T Consensus 211 ~~~~~~~~~~~p~~r~~~~~-dva~~v~~l~s~~~~~~tG~~i~vdGG~~~ 260 (260)
T 2z1n_A 211 EEALKSMASRIPMGRVGKPE-ELASVVAFLASEKASFITGAVIPVDGGAHI 260 (260)
T ss_dssp ---------CCTTSSCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHHHHHhcCCCCCccCHH-HHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence 11012222456888888888 999999999999889999999999999753
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=228.04 Aligned_cols=194 Identities=22% Similarity=0.323 Sum_probs=166.9
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++++|+++ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++++
T Consensus 45 ~~~~~~D~~~---~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 120 (239)
T 2ekp_A 45 AVPLPTDLEK---DDPKGLVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG 120 (239)
T ss_dssp CEEEECCTTT---SCHHHHHHHHHHHHTSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred cEEEecCCch---HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 6788999998 478899999999999999999999985 567888899999999999999999999999999998875
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
.|+||++||..+......++...|+++|++++.++++++.|++++||++++|+||++.|++.......+..........
T Consensus 121 -~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 199 (239)
T 2ekp_A 121 -WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARI 199 (239)
T ss_dssp -CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTC
T ss_pred -CcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcC
Confidence 6999999999887331127788999999999999999999999999999999999999998654321222222333557
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|++++.+|+ |+|+++++|+++..++++|+++.+|||+..
T Consensus 200 p~~~~~~~~-dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~ 238 (239)
T 2ekp_A 200 PMGRWARPE-EIARVAAVLCGDEAEYLTGQAVAVDGGFLA 238 (239)
T ss_dssp TTSSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred CCCCCcCHH-HHHHHHHHHcCchhcCCCCCEEEECCCccc
Confidence 888888888 999999999999889999999999999865
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=235.56 Aligned_cols=196 Identities=20% Similarity=0.270 Sum_probs=170.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH--
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-- 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-- 85 (219)
+.++.+++||++|. ++++++++++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.
T Consensus 70 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 146 (277)
T 2rhc_B 70 GVEADGRTCDVRSV--PEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGG 146 (277)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTC
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhh
Confidence 45789999999999 999999999999999999999999985 5677888999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---h---
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG---Q--- 159 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~---~--- 159 (219)
|++++ .|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++.|++...... .
T Consensus 147 m~~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 223 (277)
T 2rhc_B 147 MLERG-TGRIVNIASTGGKQG--VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWE 223 (277)
T ss_dssp HHHHT-EEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHT
T ss_pred HhhcC-CeEEEEECccccccC--CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccc
Confidence 88765 689999999988633 57889999999999999999999999999999999999999997654211 0
Q ss_pred ---HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ---ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..........|++++.+|+ |+|+++++|+++..++++|+++.+|||+..
T Consensus 224 ~~~~~~~~~~~~~~p~~r~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~ 276 (277)
T 2rhc_B 224 VSTEEAFDRITARVPIGRYVQPS-EVAEMVAYLIGPGAAAVTAQALNVCGGLGN 276 (277)
T ss_dssp CCHHHHHHHHHHHSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred cchHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence 11222233557888989998 999999999998888999999999999764
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-36 Score=232.41 Aligned_cols=193 Identities=26% Similarity=0.400 Sum_probs=166.8
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
.++++|++|. ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.++++++++++|.|++++
T Consensus 52 ~~~~~D~~~~--~~~~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~- 127 (256)
T 2d1y_A 52 AFFQVDLEDE--RERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG- 127 (256)
T ss_dssp EEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-
T ss_pred CEEEeeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence 7889999999 999999999999999999999999986 567788899999999999999999999999999998765
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc----cchHHHHHHHH
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----VGQERAVKLVR 167 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~ 167 (219)
.|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++.|++.... ...+.......
T Consensus 128 ~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 205 (256)
T 2d1y_A 128 GGAIVNVASVQGLFA--EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE 205 (256)
T ss_dssp CEEEEEECCGGGTSB--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH
T ss_pred CcEEEEEccccccCC--CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHH
Confidence 699999999988733 578899999999999999999999999999999999999999875432 10111111222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|+++++|+++..++++|+++.+|||+.+.
T Consensus 206 ~~~~~~~~~~~~-dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~ 248 (256)
T 2d1y_A 206 DLHALRRLGKPE-EVAEAVLFLASEKASFITGAILPVDGGMTAS 248 (256)
T ss_dssp TTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence 456788888888 9999999999988889999999999998764
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=234.65 Aligned_cols=194 Identities=24% Similarity=0.367 Sum_probs=166.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++++|.
T Consensus 78 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 154 (283)
T 1g0o_A 78 GSDAACVKANVGVV--EDIVRMFEEAVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE 154 (283)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC
T ss_pred CCCeEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 45789999999999 999999999999999999999999986 567788899999999999999999999999999993
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+ .|+||++||..+.... .++...|+++|+++++|+++++.|++++||++|+|+||++.|++......
T Consensus 155 --~-~g~iv~isS~~~~~~~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~ 230 (283)
T 1g0o_A 155 --I-GGRLILMGSITGQAKA-VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENL 230 (283)
T ss_dssp --T-TCEEEEECCGGGTCSS-CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTC
T ss_pred --c-CCeEEEEechhhccCC-CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhcccccccc
Confidence 2 6899999999887332 23488999999999999999999999999999999999999997543210
Q ss_pred hHHHHHHHHh--hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 159 QERAVKLVRE--AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 159 ~~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.+........ ..|++++.+|+ |+|++++||+++.++++||+++.+|||++
T Consensus 231 ~~~~~~~~~~~~~~p~~r~~~p~-dvA~~v~~l~s~~~~~itG~~i~vdgG~~ 282 (283)
T 1g0o_A 231 SNEEVDEYAAVQWSPLRRVGLPI-DIARVVCFLASNDGGWVTGKVIGIDGGAC 282 (283)
T ss_dssp CHHHHHHHHHHHSCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred CHHHHHHHHhhcCCCCCCCcCHH-HHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence 1122222223 57888989998 99999999999988999999999999975
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=233.08 Aligned_cols=196 Identities=23% Similarity=0.277 Sum_probs=168.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++|++|. ++++++++++.+++|++|++|||||+... ..++.+.+.++|++.+++|+.+++.+++.++|.|
T Consensus 72 ~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 149 (285)
T 2p91_A 72 SDLVVKCDVSLD--EDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLM 149 (285)
T ss_dssp CCCEEECCTTCH--HHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGG
T ss_pred CeEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 368899999999 99999999999999999999999998632 2567788999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ +|+||++||..+... .+++..|+++|+++++++++++.|++++||++|+|+||++.|++..............
T Consensus 150 ~~~--~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 225 (285)
T 2p91_A 150 EGR--NGAIVTLSYYGAEKV--VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHT 225 (285)
T ss_dssp TTS--CCEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHH
T ss_pred HHc--CCEEEEEccchhccC--CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHH
Confidence 753 599999999888633 5788899999999999999999999999999999999999999875432222233333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+....
T Consensus 226 ~~~~p~~~~~~~~-dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~ 270 (285)
T 2p91_A 226 TKVNPFGKPITIE-DVGDTAVFLCSDWARAITGEVVHVDNGYHIMG 270 (285)
T ss_dssp HHHSTTSSCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGBS
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHcCCcccCCCCCEEEECCCccccc
Confidence 3567888888888 99999999999888999999999999987654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=233.67 Aligned_cols=195 Identities=21% Similarity=0.297 Sum_probs=169.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++|++|+ ++++++++++.+++|++|++|||||.... ..++.+.+.++|++++++|+.++++++++++|.|
T Consensus 59 ~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 136 (261)
T 2wyu_A 59 GALLFRADVTQD--EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLL 136 (261)
T ss_dssp CCEEEECCTTCH--HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE
T ss_pred CcEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 378999999999 99999999999999999999999998532 2567788999999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++.......+......
T Consensus 137 ~~---~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 211 (261)
T 2wyu_A 137 RE---GGGIVTLTYYASEKV--VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRV 211 (261)
T ss_dssp EE---EEEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHH
T ss_pred cc---CCEEEEEecccccCC--CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHH
Confidence 63 489999999888633 5788899999999999999999999999999999999999999865432223333334
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+++..
T Consensus 212 ~~~~p~~~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 212 AQTAPLRRNITQE-EVGNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp HHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HhcCCCCCCCCHH-HHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 4567888989988 99999999999888999999999999997754
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-37 Score=245.60 Aligned_cols=196 Identities=23% Similarity=0.299 Sum_probs=168.3
Q ss_pred ceEEEEecCCccchh------------------HHHHHHHHHHHHhCCCcEEEeccccC-CCCCCCCCcCHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREG------------------AFDEAVDKACQILGNLDAFVHCYTYE-GKMQDPLQVGEDEFKKLVKI 70 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~------------------~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~ 70 (219)
.+.+++||+++...+ +++++++++.+++|++|+||||||+. ....++.+.+.++|++++++
T Consensus 66 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~v 145 (329)
T 3lt0_A 66 ILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSK 145 (329)
T ss_dssp EEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHH
Confidence 467888888775334 89999999999999999999999974 24678889999999999999
Q ss_pred hhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcc-hhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCc
Q 027744 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA-AYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLH 148 (219)
Q Consensus 71 n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~-~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v 148 (219)
|+.+++.+++.++|+|++ +|+||++||..+... .+.+. .|+++|+|+.+|+++++.|+++ +||+||+|+||+|
T Consensus 146 N~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~--~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v 220 (329)
T 3lt0_A 146 SSYSLISLCKYFVNIMKP---QSSIISLTYHASQKV--VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp HTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred HhHHHHHHHHHHHHHHhh---CCeEEEEeCccccCC--CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee
Confidence 999999999999999976 389999999998733 56775 9999999999999999999998 8999999999999
Q ss_pred cCCCCccccch-------------------------------------------HHHHHHHHhhcCCCCCCCCchhHHHH
Q 027744 149 LQDEYPIAVGQ-------------------------------------------ERAVKLVREAAPLHRWLDVKNDLAST 185 (219)
Q Consensus 149 ~t~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~ 185 (219)
.|++....... +..........|++++.+|+ |+|++
T Consensus 221 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe-evA~~ 299 (329)
T 3lt0_A 221 KSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSV 299 (329)
T ss_dssp CCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHH
T ss_pred echhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHH-HHHHH
Confidence 99986653210 01133344678999999998 99999
Q ss_pred HHHhccCCCCcccceEEEecCCcccc
Q 027744 186 VIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 186 ~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
++||+|+.++++||++|.+|||+++.
T Consensus 300 v~fL~s~~a~~itG~~i~vdGG~~~~ 325 (329)
T 3lt0_A 300 ASFLLSRESRAITGQTIYVDNGLNIM 325 (329)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHhCchhccccCcEEEEcCCeeEE
Confidence 99999999999999999999999875
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=234.35 Aligned_cols=195 Identities=23% Similarity=0.248 Sum_probs=166.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC---CCcEEEeccccCCC----CCCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG---NLDAFVHCYTYEGK----MQDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g---~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
+.++.++++|++|+ ++++++++++.+++| ++|++|||||+... ..++.+.+.++|++.+++|+.+++.+++
T Consensus 55 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 132 (269)
T 2h7i_A 55 PAKAPLLELDVQNE--EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAK 132 (269)
T ss_dssp SSCCCEEECCTTCH--HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCCceEEEccCCCH--HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHH
Confidence 34688999999999 999999999999999 99999999998632 4677889999999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--- 157 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--- 157 (219)
.++|+|++ +|+||++||..+. . .+.+..|+++|+++++|+++++.|++++|||+|+|+||+++|++.....
T Consensus 133 ~~~~~~~~---~g~iv~iss~~~~-~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~ 206 (269)
T 2h7i_A 133 ALLPIMNP---GGSIVGMDFDPSR-A--MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGA 206 (269)
T ss_dssp HHGGGEEE---EEEEEEEECCCSS-C--CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTT
T ss_pred HHHHhhcc---CCeEEEEcCcccc-c--cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccccc
Confidence 99999865 4899999998763 2 5788999999999999999999999999999999999999999754321
Q ss_pred -chH------HHHHHHHhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 -GQE------RAVKLVREAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 -~~~------~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+ ...+......|++ ++.+|+ |+|++++||+|+.++++||+++.+|||+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 267 (269)
T 2h7i_A 207 LGEEAGAQIQLLEEGWDQRAPIGWNMKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ 267 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHCTTCCCTTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred chhhHHHHHHHHHHhhhccCCcccCCCCHH-HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence 111 1112233567888 688998 9999999999999999999999999998753
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=232.30 Aligned_cols=194 Identities=26% Similarity=0.380 Sum_probs=163.9
Q ss_pred CcceEEEEecCCc----cchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC-----CC-----cCHHHHHHHHHhhhc
Q 027744 8 GQPVEVVGLDMEE----DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-----LQ-----VGEDEFKKLVKINFV 73 (219)
Q Consensus 8 ~~~~~~~~~Dl~~----~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~ 73 (219)
+.++.++++|++| . ++++++++++.+.+|++|+||||||+. ...++ .+ .+.++|++++++|+.
T Consensus 73 ~~~~~~~~~Dv~~~~~~~--~~v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 149 (288)
T 2x9g_A 73 SNTAVVCQADLTNSNVLP--ASCEEIINSCFRAFGRCDVLVNNASAF-YPTPLVQGDHEDNSNGKTVETQVAELIGTNAI 149 (288)
T ss_dssp TTCEEEEECCCSCSTTHH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCCC--------CCHHHHHHHHHHHHTH
T ss_pred CCceEEEEeecCCccCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccccccchhcccccCCHHHHHHHHHHhhH
Confidence 4578999999999 8 999999999999999999999999986 44555 56 788999999999999
Q ss_pred hHHHHHHHHHHHHHhcCC-----CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 74 APWFLLKAVGRRMKESKA-----GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 74 ~~~~l~~~~~~~l~~~~~-----~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
+++.+++.++|.|++++. .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++
T Consensus 150 g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 227 (288)
T 2x9g_A 150 APFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP--CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVS 227 (288)
T ss_dssp HHHHHHHHHHHHC--------CCCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSC
T ss_pred HHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC--CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccc
Confidence 999999999999976531 479999999998733 6788999999999999999999999999999999999999
Q ss_pred cCCCCccccchHHHHHHHHhhcCCCCC-CCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 149 LQDEYPIAVGQERAVKLVREAAPLHRW-LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 149 ~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.|++ . . ..+.. .......|++++ .+|+ |+|++++||+++.++++||+++.+|||+++.
T Consensus 228 ~t~~-~-~-~~~~~-~~~~~~~p~~r~~~~pe-dvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 286 (288)
T 2x9g_A 228 LLPV-A-M-GEEEK-DKWRRKVPLGRREASAE-QIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286 (288)
T ss_dssp SCCT-T-S-CHHHH-HHHHHTCTTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred cCcc-c-c-ChHHH-HHHHhhCCCCCCCCCHH-HHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence 9998 3 2 12222 223355788888 7887 9999999999998999999999999998764
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=229.52 Aligned_cols=189 Identities=22% Similarity=0.322 Sum_probs=159.7
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
.+++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++++ .
T Consensus 57 ~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~ 132 (247)
T 1uzm_A 57 GVEVDVTDS--DAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-F 132 (247)
T ss_dssp EEECCTTCH--HHHHHHHHHHHHHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-C
T ss_pred CeeccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-C
Confidence 488999999 999999999999999999999999986 567788899999999999999999999999999998765 6
Q ss_pred CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCC
Q 027744 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL 172 (219)
Q Consensus 93 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~ 172 (219)
|+||++||..+... .++...|+++|++++.++++++.|++++||++|+|+||++.|++.... ..+ .........|+
T Consensus 133 g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~~~p~ 208 (247)
T 1uzm_A 133 GRMIFIGSVSGLWG--IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-DER-IQQGALQFIPA 208 (247)
T ss_dssp EEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-CHH-HHHHHGGGCTT
T ss_pred CEEEEECCHhhccC--CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-CHH-HHHHHHhcCCC
Confidence 99999999988633 577899999999999999999999999999999999999999876542 222 22223355678
Q ss_pred CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 173 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+++.+|+ |+|+.+++|+++...+++|+++.+|||+.+
T Consensus 209 ~~~~~~~-dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 209 KRVGTPA-EVAGVVSFLASEDASYISGAVIPVDGGMGM 245 (247)
T ss_dssp CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCcCHH-HHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence 8888888 999999999998889999999999999864
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=230.21 Aligned_cols=195 Identities=24% Similarity=0.301 Sum_probs=168.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|. ++++++++++.+++|++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++++.|.|+++
T Consensus 59 ~~~~~~~D~~d~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 135 (263)
T 3ak4_A 59 GGFAVEVDVTKR--ASVDAAMQKAIDALGGFDLLCANAGVS-TMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS 135 (263)
T ss_dssp CCEEEECCTTCH--HHHHHHHHHHHHHHTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 678899999999 999999999999999999999999985 56778889999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----h-----H
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----Q-----E 160 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~-----~ 160 (219)
+..|+||++||..+... .++...|+++|++++.++++++.|++++||++++|+||++.|++...... . +
T Consensus 136 ~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 213 (263)
T 3ak4_A 136 NTKGVIVNTASLAAKVG--APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPE 213 (263)
T ss_dssp TCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHH
T ss_pred CCCeEEEEecccccccC--CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcH
Confidence 43589999999988633 57889999999999999999999999999999999999999997643210 0 1
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..........|++++.+|+ |+|+++++|+++.+++++|+++++|||+++
T Consensus 214 ~~~~~~~~~~p~~~~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 214 AVRAEYVSLTPLGRIEEPE-DVADVVVFLASDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp HHHHHHHHTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence 2222233556888888988 999999999998888999999999999864
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=233.02 Aligned_cols=194 Identities=22% Similarity=0.306 Sum_probs=169.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
++.++++|++|. ++++++++++.+++|++|++|||||+... ..++.+.+.++|++++++|+.+++.+++.++|.|
T Consensus 57 ~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 134 (275)
T 2pd4_A 57 SPYVYELDVSKE--EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL 134 (275)
T ss_dssp CCCEEECCTTCH--HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CcEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 378999999999 99999999999999999999999998632 2577789999999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++.|++.......+......
T Consensus 135 ~~---~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~ 209 (275)
T 2pd4_A 135 NN---GASVLTLSYLGSTKY--MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWN 209 (275)
T ss_dssp EE---EEEEEEEECGGGTSB--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHH
T ss_pred cc---CCEEEEEecchhcCC--CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHH
Confidence 64 489999999888633 5788999999999999999999999999999999999999999876533222333333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+...
T Consensus 210 ~~~~p~~~~~~p~-dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~ 253 (275)
T 2pd4_A 210 EINAPLRKNVSLE-EVGNAGMYLLSSLSSGVSGEVHFVDAGYHVM 253 (275)
T ss_dssp HHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HhcCCcCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence 3567888888888 9999999999988899999999999998764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=231.67 Aligned_cols=195 Identities=19% Similarity=0.309 Sum_probs=167.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|+++
T Consensus 55 ~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 132 (270)
T 1yde_A 55 GAVFILCDVTQE--DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS 132 (270)
T ss_dssp TEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC
Confidence 378899999999 999999999999999999999999986445678889999999999999999999999999999765
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---chH-HHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---GQE-RAVKL 165 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---~~~-~~~~~ 165 (219)
.|+||++||..+... .+....|+++|++++.++++++.|++++||++|+|+||++.|++..... ... .....
T Consensus 133 --~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 208 (270)
T 1yde_A 133 --QGNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIRE 208 (270)
T ss_dssp --TCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHH
T ss_pred --CCEEEEEcCccccCC--CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHH
Confidence 589999999887633 5778999999999999999999999999999999999999999754321 111 11111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.....|++++.+|+ |+|++++||+++ ++++||+++.+|||+++..
T Consensus 209 ~~~~~p~~r~~~p~-dva~~v~~L~s~-~~~itG~~i~vdGG~~~~~ 253 (270)
T 1yde_A 209 GMLAQPLGRMGQPA-EVGAAAVFLASE-ANFCTGIELLVTGGAELGY 253 (270)
T ss_dssp HHHTSTTSSCBCHH-HHHHHHHHHHHH-CTTCCSCEEEESTTTTSCC
T ss_pred HhhcCCCCCCcCHH-HHHHHHHHHccc-CCCcCCCEEEECCCeeccc
Confidence 12456889989998 999999999997 7899999999999987653
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=232.83 Aligned_cols=195 Identities=26% Similarity=0.356 Sum_probs=167.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 126 (254)
T 1hdc_A 50 GDAARYQHLDVTIE--EDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126 (254)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceeEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556778899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|++++.|+++++.|++++||++++|+||++.|++....... .. ....
T Consensus 127 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~-~~~~ 201 (254)
T 1hdc_A 127 DAG-GGSIVNISSAAGLMG--LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR-QG-EGNY 201 (254)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC-CS-TTSC
T ss_pred HcC-CCEEEEECchhhccC--CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh-HH-HHHH
Confidence 875 699999999988733 578899999999999999999999999999999999999999875432110 00 0111
Q ss_pred hhcCCCCCC-CCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWL-DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~-~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++. +|+ |+|+++++|+++.+++++|+++.+|||+.+.
T Consensus 202 ~~~p~~~~~~~~~-dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 245 (254)
T 1hdc_A 202 PNTPMGRVGNEPG-EIAGAVVKLLSDTSSYVTGAELAVDGGWTTG 245 (254)
T ss_dssp TTSTTSSCB-CHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred hcCCCCCCCCCHH-HHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence 335677777 777 9999999999998889999999999998763
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-36 Score=236.62 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=166.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 64 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 140 (285)
T 3sc4_A 64 GGQALPIVGDIRDG--DAVAAAVAKTVEQFGGIDICVNNASAI-NLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMK 140 (285)
T ss_dssp TSEEEEEECCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45799999999999 999999999999999999999999986 678889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC-CccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||++||..+.... .++...|+++|+|+++|+++++.|++++|||+|+|+|| .+.|++.... .
T Consensus 141 ~~~-~g~iv~isS~~~~~~~-~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~---------~ 209 (285)
T 3sc4_A 141 GRD-NPHILTLSPPIRLEPK-WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL---------L 209 (285)
T ss_dssp TSS-SCEEEECCCCCCCSGG-GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH---------H
T ss_pred HcC-CcEEEEECChhhccCC-CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh---------c
Confidence 876 7999999999887332 36779999999999999999999999999999999999 6887664322 2
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....+++++.+|+ |+|++++||+++.+ ++||+++.+|||+...
T Consensus 210 ~~~~~~~r~~~pe-dvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~ 252 (285)
T 3sc4_A 210 GGDEAMARSRKPE-VYADAAYVVLNKPS-SYTGNTLLCEDVLLES 252 (285)
T ss_dssp TSCCCCTTCBCTH-HHHHHHHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred cccccccCCCCHH-HHHHHHHHHhCCcc-cccceEEEEcCchhcc
Confidence 2345678888998 99999999999888 9999999999987654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-36 Score=231.29 Aligned_cols=192 Identities=26% Similarity=0.411 Sum_probs=160.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|.|+++
T Consensus 60 ~~~~~~~Dl~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 136 (253)
T 2nm0_A 60 GFLAVKCDITDT--EQVEQAYKEIEETHGPVEVLIANAGVT-KDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA 136 (253)
T ss_dssp TSEEEECCTTSH--HHHHHHHHHHHHHTCSCSEEEEECSCC-TTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 378899999999 999999999999999999999999986 56778888999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .|+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||+++|++..... .+.. ......
T Consensus 137 ~-~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~-~~~~~~ 211 (253)
T 2nm0_A 137 K-KGRVVLISSVVGLLG--SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT-DEQR-ANIVSQ 211 (253)
T ss_dssp T-CEEEEEECCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CH-HHHHTT
T ss_pred C-CCEEEEECchhhCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC-HHHH-HHHHhc
Confidence 5 699999999988632 4667899999999999999999999999999999999999999865421 1111 222245
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+
T Consensus 212 ~p~~~~~~p~-dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 212 VPLGRYARPE-EIAATVRFLASDDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp CTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred CCCCCCcCHH-HHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence 6788888888 999999999999889999999999999865
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-36 Score=232.67 Aligned_cols=196 Identities=23% Similarity=0.231 Sum_probs=168.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 51 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 127 (253)
T 1hxh_A 51 GERSMFVRHDVSSE--ADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK 127 (253)
T ss_dssp CTTEEEECCCTTCH--HHHHHHHHHHHHHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHH
Confidence 34788999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCC--CeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKH--KIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~--gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+++ |+||++||..+... .++...|+++|++++.|+++++.|++++ ||++++|+||++.|++.......+.....
T Consensus 128 ~~~--g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 203 (253)
T 1hxh_A 128 ETG--GSIINMASVSSWLP--IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM 203 (253)
T ss_dssp TTC--EEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH
T ss_pred HcC--CEEEEEcchhhcCC--CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHH
Confidence 754 89999999998733 5788999999999999999999999988 99999999999999875432111111110
Q ss_pred HHh---hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VRE---AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~---~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... ..|++++.+|+ |+|+++++|+++..++++|+++.+|||+...
T Consensus 204 ~~~~~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 251 (253)
T 1hxh_A 204 VLHDPKLNRAGRAYMPE-RIAQLVLFLASDESSVMSGSELHADNSILGM 251 (253)
T ss_dssp HBCBTTTBTTCCEECHH-HHHHHHHHHHSGGGTTCCSCEEEESSSCTTT
T ss_pred HhhhhccCccCCCCCHH-HHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 213 46778888888 9999999999998899999999999998654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=231.80 Aligned_cols=193 Identities=23% Similarity=0.293 Sum_probs=167.2
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC---CCCCCC-cCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK---MQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+++++|++|+ ++++++++++.+++|++|++|||||+... ..++.+ .+.++|++++++|+.++++++++++|+|
T Consensus 61 ~~~~~~D~~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 138 (265)
T 1qsg_A 61 DIVLQCDVAED--ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 138 (265)
T ss_dssp CCEEECCTTCH--HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 47899999999 99999999999999999999999998532 256667 8899999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++ +|+||++||..+... .+++..|+++|++++.++++++.|++++||++|+|+||++.|++.......+......
T Consensus 139 ~~---~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~ 213 (265)
T 1qsg_A 139 NP---GSALLTLSYLGAERA--IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC 213 (265)
T ss_dssp EE---EEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHH
T ss_pred cc---CCEEEEEcchhhccC--CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHH
Confidence 64 489999999988633 5788899999999999999999999999999999999999999876532222333333
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+.
T Consensus 214 ~~~~p~~~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 214 EAVTPIRRTVTIE-DVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp HHHSTTSSCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred HhcCCCCCCCCHH-HHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence 3567888888988 9999999999988899999999999999775
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=233.89 Aligned_cols=194 Identities=20% Similarity=0.326 Sum_probs=167.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC--CCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD--PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
++.++++|++|+ ++++++++++.+++|++|+||||||+. ...+ +.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 79 ~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (297)
T 1xhl_A 79 KINAVVADVTEA--SGQDDIINTTLAKFGKIDILVNNAGAN-LADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 155 (297)
T ss_dssp GEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-cCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 789999999999 999999999999999999999999985 4455 78899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCC-CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-ch------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-GQ------ 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~-~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~------ 159 (219)
+++ |+||++||..+. .+ . ++...|+++|+++++|+++++.|++++||++|+|+||++.|++..... ..
T Consensus 156 ~~~--g~IV~isS~~~~-~~-~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~ 231 (297)
T 1xhl_A 156 KTK--GEIVNVSSIVAG-PQ-AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKL 231 (297)
T ss_dssp HTT--CEEEEECCGGGS-SS-CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred hcC--CEEEEEcCchhc-cC-CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccch
Confidence 754 899999999886 33 4 778999999999999999999999999999999999999999865431 11
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~ 211 (219)
+..........|++++.+|+ |+|+++++|+++. +++++|+++.+|||+.+.
T Consensus 232 ~~~~~~~~~~~p~~r~~~pe-dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~ 283 (297)
T 1xhl_A 232 YSFIGSRKECIPVGHCGKPE-EIANIIVFLADRNLSSYIIGQSIVADGGSTLV 283 (297)
T ss_dssp HHHHHHCTTTCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence 11111222345788888888 9999999999987 889999999999998765
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=235.06 Aligned_cols=186 Identities=12% Similarity=0.155 Sum_probs=159.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 61 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lvnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 137 (274)
T 3e03_A 61 GGQGLALKCDIREE--DQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLL 137 (274)
T ss_dssp TSEEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcc-cCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC-CccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG-LHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||++||..+......++...|+++|+|+++|+++++.|++++|||+|+|+|| .+.|++....
T Consensus 138 ~~~-~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~---------- 206 (274)
T 3e03_A 138 QAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML---------- 206 (274)
T ss_dssp TSS-SCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------
T ss_pred hcC-CceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc----------
Confidence 876 7999999999886321135678899999999999999999999999999999999 6899876321
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+..++.+|+ |+|++++||+++.++++||+++ +|||...
T Consensus 207 -~~~~~~~~~~pe-dvA~~v~~l~s~~~~~itG~~i-~~~g~~~ 247 (274)
T 3e03_A 207 -PGVDAAACRRPE-IMADAAHAVLTREAAGFHGQFL-IDDEVLA 247 (274)
T ss_dssp --CCCGGGSBCTH-HHHHHHHHHHTSCCTTCCSCEE-EHHHHHH
T ss_pred -ccccccccCCHH-HHHHHHHHHhCccccccCCeEE-EcCcchh
Confidence 123344567787 9999999999999999999999 7777543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=231.89 Aligned_cols=195 Identities=23% Similarity=0.321 Sum_probs=166.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC----CCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD----PLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
++.++++|++|+ ++++++++++.+++|++|+||||||.. ...+ +.+.+.++|++++++|+.+++.+++.++|.
T Consensus 59 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 135 (280)
T 1xkq_A 59 QVNSVVADVTTE--DGQDQIINSTLKQFGKIDVLVNNAGAA-IPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135 (280)
T ss_dssp GEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 789999999999 999999999999999999999999985 4445 678899999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-ch-----
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-GQ----- 159 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-~~----- 159 (219)
|++++ |+||++||..+. .+..++...|+++|+++++|+++++.|++++||++|+|+||++.|++..... ..
T Consensus 136 ~~~~~--g~iv~isS~~~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~ 212 (280)
T 1xkq_A 136 LVASK--GEIVNVSSIVAG-PQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQK 212 (280)
T ss_dssp HHHHT--CEEEEECCGGGS-SSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHH
T ss_pred hhcCC--CcEEEecCcccc-CCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccc
Confidence 98764 899999999887 3312778899999999999999999999999999999999999999865431 11
Q ss_pred -HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCcccc
Q 027744 160 -ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~ 211 (219)
...........|++++.+|+ |+|+++++|+++. +.+++|+++.+|||+.+.
T Consensus 213 ~~~~~~~~~~~~p~~~~~~pe-dvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~ 265 (280)
T 1xkq_A 213 FYNFMASHKECIPIGAAGKPE-HIANIILFLADRNLSFYILGQSIVADGGTSLV 265 (280)
T ss_dssp HHHHHHHCTTTCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred hHHHHHHHHcCCCCCCCCCHH-HHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence 11111222345788888888 9999999999987 889999999999998764
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=230.65 Aligned_cols=192 Identities=26% Similarity=0.375 Sum_probs=165.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.+++.+.|+| +
T Consensus 52 ~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~ 127 (263)
T 2a4k_A 52 AEAIAVVADVSDP--KAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-E 127 (263)
T ss_dssp SSEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_pred CceEEEEcCCCCH--HHHHHHHHHHHHHcCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-h
Confidence 4688999999999 999999999999999999999999986 56778889999999999999999999999999999 4
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .|+||++||..+. . .++...|+++|+++++++++++.|++++||++++|+||++.|++.... ..+ .......
T Consensus 128 ~--~g~iv~isS~~~~-~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~ 200 (263)
T 2a4k_A 128 E--GGSLVLTGSVAGL-G--AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPW-AWEQEVG 200 (263)
T ss_dssp T--TCEEEEECCCTTC-C--HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHH-HHHHHHH
T ss_pred c--CCEEEEEecchhc-C--CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHH-HHHHHHh
Confidence 3 6899999999886 3 467889999999999999999999999999999999999999987653 222 2222335
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|++++.+|+ |+|+++++|+++.+++++|+++.+|||+.+..
T Consensus 201 ~~p~~~~~~p~-dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~ 243 (263)
T 2a4k_A 201 ASPLGRAGRPE-EVAQAALFLLSEESAYITGQALYVDGGRSIVG 243 (263)
T ss_dssp TSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTTC-
T ss_pred cCCCCCCcCHH-HHHHHHHHHhCccccCCcCCEEEECCCccccC
Confidence 67888888888 99999999999988999999999999987654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=227.44 Aligned_cols=185 Identities=18% Similarity=0.224 Sum_probs=160.0
Q ss_pred cCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC---CCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 17 DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 17 Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
|+.|. ++++++++++.+++|++|++|||||.. .. .++.+.+.++|++++++|+.+++.++++++|+|++++ .|
T Consensus 52 ~~~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g 127 (244)
T 1zmo_A 52 IALAE--QKPERLVDATLQHGEAIDTIVSNDYIP-RPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GA 127 (244)
T ss_dssp EECCC--CCGGGHHHHHGGGSSCEEEEEECCCCC-TTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CE
T ss_pred cccCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-Cc
Confidence 33466 788899999999999999999999986 55 7888999999999999999999999999999998875 79
Q ss_pred eEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC---ccccchHHHHHHHHh-h
Q 027744 94 SIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY---PIAVGQERAVKLVRE-A 169 (219)
Q Consensus 94 ~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~---~~~~~~~~~~~~~~~-~ 169 (219)
+||++||..+... .++...|+++|+++++|+++++.|++++||++|+|+||+++|++. ......+...... . .
T Consensus 128 ~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~ 204 (244)
T 1zmo_A 128 SVIFITSSVGKKP--LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERV-DRD 204 (244)
T ss_dssp EEEEECCGGGTSC--CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHH-HHH
T ss_pred EEEEECChhhCCC--CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHH-hcC
Confidence 9999999998733 578899999999999999999999999999999999999999987 4322122222222 3 5
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.|++++.+|+ |+|+++++|+++..+++||+++.+|||+.
T Consensus 205 ~p~~r~~~pe-~vA~~v~~l~s~~~~~~tG~~i~vdgG~~ 243 (244)
T 1zmo_A 205 VPLGRLGRPD-EMGALITFLASRRAAPIVGQFFAFTGGYL 243 (244)
T ss_dssp CTTCSCBCHH-HHHHHHHHHHTTTTGGGTTCEEEESTTCC
T ss_pred CCCCCCcCHH-HHHHHHHHHcCccccCccCCEEEeCCCCC
Confidence 7888888888 99999999999999999999999999974
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=230.17 Aligned_cols=199 Identities=23% Similarity=0.298 Sum_probs=158.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCc----CHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV----GEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++.++++|++|. ++++++++++.+++|++|++|||||.. ...++.+. +.++|++++++|+.+++.+++.++
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 133 (278)
T 1spx_A 57 EQNVNSVVADVTTD--AGQDEILSTTLGKFGKLDILVNNAGAA-IPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAV 133 (278)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceeEEecccCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 45666777 999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccc-cccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHH
Q 027744 84 RRMKESKAGGSIVFLTSIIG-AERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QER 161 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~-~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~ 161 (219)
|.|++++ |+||++||..+ . .+ .++...|+++|++++.++++++.|++++||++++|+||++.|++...... ...
T Consensus 134 ~~~~~~~--g~iv~isS~~~~~-~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~ 209 (278)
T 1spx_A 134 PHLSSTK--GEIVNISSIASGL-HA-TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEET 209 (278)
T ss_dssp HHHHHHT--CEEEEECCTTSSS-SC-CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------
T ss_pred HHHhhcC--CeEEEEecccccc-cC-CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchh
Confidence 9998763 89999999988 5 33 57889999999999999999999999999999999999999998654211 111
Q ss_pred H------HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCc-ccceEEEecCCccccCCC
Q 027744 162 A------VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY-MTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 162 ~------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~-~~G~~i~~dgG~~~~~~~ 214 (219)
. ........|++++.+|+ |+|+++++|+++...+ ++|+++.+|||+.+....
T Consensus 210 ~~~~~~~~~~~~~~~p~~~~~~~~-dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~ 268 (278)
T 1spx_A 210 SKKFYSTMATMKECVPAGVMGQPQ-DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGL 268 (278)
T ss_dssp ----HHHHHHHHHHCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC---
T ss_pred hhhhhHHHHHHHhcCCCcCCCCHH-HHHHHHHHHcCccccCcccCcEEEECCCcccccCc
Confidence 1 12222456888888888 9999999999976666 999999999998766543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=236.42 Aligned_cols=194 Identities=22% Similarity=0.289 Sum_probs=160.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|. ++++++++++.+++|++|+||||||+. ... .+.+.++|++.+++|+.+++++++.++|+|.
T Consensus 70 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 144 (287)
T 3pxx_A 70 GRKAYTAEVDVRDR--AAVSRELANAVAEFGKLDVVVANAGIC-PLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT 144 (287)
T ss_dssp TSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-ccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence 56889999999999 999999999999999999999999986 333 3378899999999999999999999999983
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ +|+||++||..+.... +.++...|+++|+++++|+++++.|++++||++|+|+||+|.|++......
T Consensus 145 ~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~ 221 (287)
T 3pxx_A 145 S---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM 221 (287)
T ss_dssp T---TCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH
T ss_pred c---CcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch
Confidence 2 6899999998876321 014567899999999999999999999999999999999999998764211
Q ss_pred h------------HHHHHH--HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 Q------------ERAVKL--VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~------------~~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ...... .....| +++.+|+ |+|++++||+|+.++++||+++.+|||+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~-dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 222 YRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEAS-DISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp HHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhhhccccccchhHHHHhhhhhhcccC-CCCCCHH-HHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 0 000110 112233 6778887 9999999999999999999999999998763
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=226.42 Aligned_cols=197 Identities=19% Similarity=0.220 Sum_probs=173.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. ++++++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|++
T Consensus 59 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (266)
T 3p19_A 59 PNTLCAQVDVTDK--YTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA 135 (266)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHHHHHHHCSEEEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCH--HHHHHHHHHHHHHCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 3688999999999 999999999999999999999999986 6678889999999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+.. + .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++................
T Consensus 136 ~~-~g~IV~isS~~~~~-~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 212 (266)
T 3p19_A 136 RN-CGTIINISSIAGKK-T-FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW 212 (266)
T ss_dssp HT-CCEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH
T ss_pred cC-CcEEEEEcChhhCC-C-CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh
Confidence 76 79999999999973 3 688899999999999999999999999999999999999999988765544333333333
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
..|++++.+|+ |+|++++||++.....+.++.+....++....
T Consensus 213 ~~~~~r~~~pe-dvA~av~~l~~~~~~~~~~~i~i~p~~~~~~~ 255 (266)
T 3p19_A 213 RVDMGGVLAAD-DVARAVLFAYQQPQNVCIREIALAPTKQQPKL 255 (266)
T ss_dssp HHHTTCCBCHH-HHHHHHHHHHHSCTTEEEEEEEEEETTCCC--
T ss_pred cccccCCCCHH-HHHHHHHHHHcCCCCccceeeEEecCCCCCcc
Confidence 45888989998 99999999999988899999988888876554
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=222.77 Aligned_cols=196 Identities=20% Similarity=0.325 Sum_probs=170.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC---CCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD---PLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.++.++++|++|+ ++++++++++.+.++++|++|||||.. ...+ +.+.+.++|++++++|+.+++.+++.+++
T Consensus 51 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (250)
T 2cfc_A 51 ADKVLRVRADVADE--GDVNAAIAATMEQFGAIDVLVNNAGIT-GNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLP 127 (250)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 4444 77889999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
.|++++ .++||++||..+... .++...|+++|++++.+++++++|++++||++++++||++.|++.......+....
T Consensus 128 ~~~~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~ 204 (250)
T 2cfc_A 128 HMLLQG-AGVIVNIASVASLVA--FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRD 204 (250)
T ss_dssp HHHHHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHH
T ss_pred HHHhCC-CCEEEEECChhhccC--CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHH
Confidence 998865 689999999988633 57889999999999999999999999999999999999999998765222222223
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|++++.+|+ |+|+++++|+++...+++|+++.+|||++.
T Consensus 205 ~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 249 (250)
T 2cfc_A 205 QVLARIPQKEIGTAA-QVADAVMFLAGEDATYVNGAALVMDGAYTA 249 (250)
T ss_dssp HHHTTCTTCSCBCHH-HHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHcCchhhcccCCEEEECCceec
Confidence 333556788888888 999999999998888999999999999863
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=225.97 Aligned_cols=195 Identities=27% Similarity=0.388 Sum_probs=161.0
Q ss_pred CcceEEEEecCCccch--hHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCH-----------HHHHHHHHhhhch
Q 027744 8 GQPVEVVGLDMEEDRE--GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-----------DEFKKLVKINFVA 74 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~ 74 (219)
+.++.++++|++|.+. ++++++++++.+.+|++|+||||||+. ...++.+.+. ++|++++++|+.+
T Consensus 61 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 139 (276)
T 1mxh_A 61 AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-YPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA 139 (276)
T ss_dssp TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred CCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCccccCcccccccccchHHHHHHHHHhccHH
Confidence 4578999999998511 468888999999999999999999986 5567777888 9999999999999
Q ss_pred HHHHHHHHHHHHHhcCCC------CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 75 PWFLLKAVGRRMKESKAG------GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 75 ~~~l~~~~~~~l~~~~~~------g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
++++++.++|.|+ ++ . |+||++||..+... .++...|+++|++++.|+++++.|++++||++|+|+||++
T Consensus 140 ~~~l~~~~~~~~~-~~-~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v 215 (276)
T 1mxh_A 140 PLFLIRAFARRQG-EG-GAWRSRNLSVVNLCDAMTDLP--LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS 215 (276)
T ss_dssp HHHHHHHHHHTC---------CCCEEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred HHHHHHHHHHHHh-cC-CCCCCCCcEEEEECchhhcCC--CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence 9999999999987 43 4 89999999998733 5788999999999999999999999999999999999999
Q ss_pred cCCCCccccchHHHHHHHHhhcCCCC-CCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 149 LQDEYPIAVGQERAVKLVREAAPLHR-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 149 ~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.|+ . . ...+.. .......|+++ +.+|+ |+|+++++|+++...+++|+++.+|||+++.+
T Consensus 216 ~t~-~-~-~~~~~~-~~~~~~~p~~r~~~~~~-dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 275 (276)
T 1mxh_A 216 LLP-P-A-MPQETQ-EEYRRKVPLGQSEASAA-QIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275 (276)
T ss_dssp SCC-S-S-SCHHHH-HHHHTTCTTTSCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred cCC-c-c-CCHHHH-HHHHhcCCCCCCCCCHH-HHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence 999 2 2 222222 22335577888 88887 99999999999888999999999999987654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-35 Score=225.47 Aligned_cols=190 Identities=20% Similarity=0.314 Sum_probs=161.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|. ++++ ++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|+++
T Consensus 51 ~~~~~~~D~~~~--~~~~----~~~~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 123 (246)
T 2ag5_A 51 GIQTRVLDVTKK--KQID----QFANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ 123 (246)
T ss_dssp TEEEEECCTTCH--HHHH----HHHHHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeeCCCH--HHHH----HHHHHhCCCCEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 688999999998 7776 4556678999999999986 55677889999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCC-CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYP-GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVK 164 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~-~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~ 164 (219)
+ .|+||++||..+... .+ +...|+++|++++.++++++.|++++||++++|+||++.|++...... .+....
T Consensus 124 ~-~g~iv~isS~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 200 (246)
T 2ag5_A 124 K-SGNIINMSSVASSVK--GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARN 200 (246)
T ss_dssp T-CEEEEEECCSBTTTB--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHH
T ss_pred C-CceEEEEechHhCcC--CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHH
Confidence 5 689999999988633 35 788999999999999999999999999999999999999987543211 122222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|++++.+|+ |+|+++++|+++.+.++||+++.+|||+++
T Consensus 201 ~~~~~~~~~~~~~~~-dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~ 245 (246)
T 2ag5_A 201 DFLKRQKTGRFATAE-EIAMLCVYLASDESAYVTGNPVIIDGGWSL 245 (246)
T ss_dssp HHHHTCTTSSCEEHH-HHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHHhcCCCCCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 233456888888888 999999999999889999999999999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=225.85 Aligned_cols=188 Identities=27% Similarity=0.381 Sum_probs=166.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++++++.++|.|+++
T Consensus 54 ~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (260)
T 1nff_A 54 AARYVHLDVTQP--AQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 130 (260)
T ss_dssp GEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 478899999999 999999999999999999999999986 56678889999999999999999999999999999887
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .|+||++||..+... .++...|+++|++++.++++++.|++++||++++|+||++.|++.. . ..+. . ..
T Consensus 131 ~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~~----~-~~ 200 (260)
T 1nff_A 131 G-RGSIINISSIEGLAG--TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPED----I-FQ 200 (260)
T ss_dssp T-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCTT----C-SC
T ss_pred C-CCEEEEEeehhhcCC--CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chhh----H-Hh
Confidence 5 699999999998733 5778899999999999999999999999999999999999999754 1 1110 1 14
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+.
T Consensus 201 ~~~~~~~~~~-dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~~ 241 (260)
T 1nff_A 201 TALGRAAEPV-EVSNLVVYLASDESSYSTGAEFVVDGGTVAG 241 (260)
T ss_dssp CSSSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred CccCCCCCHH-HHHHHHHHHhCccccCCcCCEEEECCCeecc
Confidence 5777888887 9999999999988889999999999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=222.82 Aligned_cols=198 Identities=19% Similarity=0.282 Sum_probs=170.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 132 (261)
T 1gee_A 56 GGEAIAVKGDVTVE--SDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132 (261)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++..++||++||..+..+ .++...|+++|++++.+++.++.+++++||++++++||++.|++.......+.......
T Consensus 133 ~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 210 (261)
T 1gee_A 133 ENDIKGTVINMSSVHEKIP--WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE 210 (261)
T ss_dssp HTTCCCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH
T ss_pred hCCCCCEEEEeCCHHhcCC--CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHH
Confidence 7543589999999988633 57889999999999999999999999999999999999999998764322222222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++.+|+ |+|+++++|+++...+++|+++.+|||+++.
T Consensus 211 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 253 (261)
T 1gee_A 211 SMIPMGYIGEPE-EIAAVAAWLASSEASYVTGITLFADGGMTLY 253 (261)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCccccCCCCcEEEEcCCcccC
Confidence 456778888887 9999999999988889999999999999765
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=234.24 Aligned_cols=192 Identities=19% Similarity=0.242 Sum_probs=164.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.+.++|+
T Consensus 85 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 161 (322)
T 3qlj_A 85 GGEAVADGSNVADW--DQAAGLIQTAVETFGGLDVLVNNAGIV-RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWR 161 (322)
T ss_dssp TCEEEEECCCTTSH--HHHHHHHHHHHHHHSCCCEEECCCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 46789999999999 999999999999999999999999986 567888999999999999999999999999999997
Q ss_pred hcC-----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 88 ESK-----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 88 ~~~-----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+.+ .+|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+|| +.|++..........
T Consensus 162 ~~~~~~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~ 238 (322)
T 3qlj_A 162 GLSKAGKAVDGRIINTSSGAGLQG--SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA 238 (322)
T ss_dssp HHHHTTCCCCEEEEEECCHHHHHC--BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---
T ss_pred HccccCCCCCcEEEEEcCHHHccC--CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh
Confidence 532 1379999999998743 57889999999999999999999999999999999999 899987765433211
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......+..+|+ |+|++++||+++.+.++||+++.+|||+...
T Consensus 239 -----~~~~~~~~~~pe-dva~~v~~L~s~~~~~itG~~i~vdGG~~~~ 281 (322)
T 3qlj_A 239 -----TQDQDFDAMAPE-NVSPLVVWLGSAEARDVTGKVFEVEGGKIRV 281 (322)
T ss_dssp ----------CCTTCGG-GTHHHHHHHTSGGGGGCCSCEEEEETTEEEE
T ss_pred -----ccccccCCCCHH-HHHHHHHHHhCccccCCCCCEEEECCCcccc
Confidence 111222445777 9999999999999999999999999999764
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=232.83 Aligned_cols=187 Identities=22% Similarity=0.269 Sum_probs=158.2
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccc
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~ 102 (219)
++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.+++.++++++|+|++ +|+||++||..
T Consensus 104 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~ 180 (297)
T 1d7o_A 104 WTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP---GGASISLTYIA 180 (297)
T ss_dssp CSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc---CceEEEEeccc
Confidence 7899999999999999999999999742 2567788999999999999999999999999999965 48999999998
Q ss_pred ccccCCCCCc-chhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCch
Q 027744 103 GAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180 (219)
Q Consensus 103 ~~~~~~~~~~-~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (219)
+... .+++ ..|+++|+|+++|+++++.|+++ +|||+|+|+||++.|++.......+..........|++++.+|+
T Consensus 181 ~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe- 257 (297)
T 1d7o_A 181 SERI--IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTAD- 257 (297)
T ss_dssp GTSC--CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHH-
T ss_pred cccC--CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHH-
Confidence 8633 4666 68999999999999999999985 89999999999999998765321222223333557888888888
Q ss_pred hHHHHHHHhccCCCCcccceEEEecCCccccCCCcc
Q 027744 181 DLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMR 216 (219)
Q Consensus 181 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~~ 216 (219)
|+|++++||+++.+.++||+++.+|||+++...+..
T Consensus 258 dvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~~~~~ 293 (297)
T 1d7o_A 258 EVGNAAAFLVSPLASAITGATIYVDNGLNSMGVALD 293 (297)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSCTT
T ss_pred HHHHHHHHHhCccccCCCCCEEEECCCceeecCCCC
Confidence 999999999999889999999999999987654433
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=223.01 Aligned_cols=189 Identities=23% Similarity=0.365 Sum_probs=149.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|+++. +++.+++++ .+++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++
T Consensus 60 ~~~~~~~~D~~~~--~~~~~~~~~----~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 132 (249)
T 3f9i_A 60 DNYTIEVCNLANK--EECSNLISK----TSNLDILVCNAGIT-SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQ 132 (249)
T ss_dssp SSEEEEECCTTSH--HHHHHHHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCccEEEcCCCCH--HHHHHHHHh----cCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4688999999998 887777654 47899999999986 5567778889999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++...... ........
T Consensus 133 ~~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~ 207 (249)
T 3f9i_A 133 KR-YGRIINISSIVGIAG--NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--KQREAIVQ 207 (249)
T ss_dssp HT-CEEEEEECCCCC--C--CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--HHHHHHHH
T ss_pred CC-CcEEEEEccHHhccC--CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--HHHHHHHh
Confidence 76 799999999998743 58889999999999999999999999999999999999999998776432 22333446
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+++++..|+ |+|+++++|+++.+.+++|+++++|||+.+
T Consensus 208 ~~~~~~~~~~~-dva~~~~~l~s~~~~~~tG~~~~vdgG~~~ 248 (249)
T 3f9i_A 208 KIPLGTYGIPE-DVAYAVAFLASNNASYITGQTLHVNGGMLM 248 (249)
T ss_dssp HCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred cCCCCCCcCHH-HHHHHHHHHcCCccCCccCcEEEECCCEee
Confidence 78899999998 999999999999899999999999999975
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=219.28 Aligned_cols=197 Identities=27% Similarity=0.332 Sum_probs=169.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||......++.+.+.++|++.+++|+.+++.+++.+.+.|+
T Consensus 61 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 138 (260)
T 3awd_A 61 GHDVSSVVMDVTNT--ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIML 138 (260)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence 45789999999999 9999999999999999999999999863367788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+++ .++||++||..+... .++. ..|+++|++++.++++++++++++||++++|+||++.|++.......+.....
T Consensus 139 ~~~-~~~iv~~sS~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~ 215 (260)
T 3awd_A 139 EQK-QGVIVAIGSMSGLIV--NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDA 215 (260)
T ss_dssp HHT-CEEEEEECCGGGTSC--CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHH
T ss_pred hcC-CCEEEEEecchhccc--CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHH
Confidence 765 689999999988633 3444 89999999999999999999999999999999999999987622222222222
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|++++.+|+ |+|+++++|+++...+++|+++++|||+..
T Consensus 216 ~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~ 259 (260)
T 3awd_A 216 WIAGTPMGRVGQPD-EVASVVQFLASDAASLMTGAIVNVDAGFTV 259 (260)
T ss_dssp HHHTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHhcCCcCCCCCHH-HHHHHHHHHhCchhccCCCcEEEECCceec
Confidence 33556888888888 999999999998888999999999999753
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=240.20 Aligned_cols=192 Identities=21% Similarity=0.258 Sum_probs=164.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCC-CcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGN-LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+.++.||++|. ++++++++++.+++++ +|++|||||+. ....+.+++.++|++++++|+.+++++.+.+.+.|++
T Consensus 260 ~~~~~~~Dvtd~--~~v~~~~~~~~~~~g~~id~lV~nAGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~ 336 (454)
T 3u0b_A 260 GGTALTLDVTAD--DAVDKITAHVTEHHGGKVDILVNNAGIT-RDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTI 336 (454)
T ss_dssp TCEEEECCTTST--THHHHHHHHHHHHSTTCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSS
T ss_pred CCeEEEEecCCH--HHHHHHHHHHHHHcCCCceEEEECCccc-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 357899999999 9999999999999986 99999999996 6678889999999999999999999999999999887
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .++||++||..+... .+++..|+++|+++++|+++++.|++++||++|+|+||++.|++....... ..+....
T Consensus 337 ~~-~g~iV~iSS~a~~~g--~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~ 411 (454)
T 3u0b_A 337 GE-GGRVIGLSSMAGIAG--NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRR 411 (454)
T ss_dssp CT-TCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHH
T ss_pred cC-CCEEEEEeChHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHh
Confidence 65 799999999998743 588999999999999999999999999999999999999999987653221 1222334
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..++++.++|+ |+|+++.||+|+.+.++||++|.+|||..+
T Consensus 412 ~~~l~r~g~pe-dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 452 (454)
T 3u0b_A 412 LNSLFQGGQPV-DVAELIAYFASPASNAVTGNTIRVCGQAML 452 (454)
T ss_dssp SBTTSSCBCHH-HHHHHHHHHHCGGGTTCCSCEEEESSSBSC
T ss_pred hccccCCCCHH-HHHHHHHHHhCCccCCCCCcEEEECCcccc
Confidence 56788888888 999999999999999999999999999864
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=232.40 Aligned_cols=184 Identities=16% Similarity=0.189 Sum_probs=162.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|+|+
T Consensus 100 g~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 176 (346)
T 3kvo_A 100 GGKALPCIVDVRDE--QQISAAVEKAIKKFGGIDILVNNASAI-SLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLK 176 (346)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999986 668889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC-ccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL-HLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~-v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||++||..+....+.+++..|+++|+++++|+++++.|++ .||++|+|+||+ +.|++....
T Consensus 177 ~~~-~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~---------- 244 (346)
T 3kvo_A 177 KSK-VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML---------- 244 (346)
T ss_dssp TCS-SCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH----------
T ss_pred HCC-CCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh----------
Confidence 876 7999999999887432257789999999999999999999999 899999999995 887654321
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
....+++++.+|+ |+|+++++|+++ .+++||+++ +|||+.
T Consensus 245 ~~~~~~~r~~~pe-dvA~~v~~L~s~-~~~itG~~i-vdgg~~ 284 (346)
T 3kvo_A 245 GGPGIESQCRKVD-IIADAAYSIFQK-PKSFTGNFV-IDENIL 284 (346)
T ss_dssp CC--CGGGCBCTH-HHHHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred ccccccccCCCHH-HHHHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence 1334567778888 999999999999 899999998 999953
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=222.35 Aligned_cols=193 Identities=19% Similarity=0.180 Sum_probs=153.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++|. ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 52 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 128 (264)
T 3tfo_A 52 GGTALAQVLDVTDR--HSVAAFAQAAVDTWGRIDVLVNNAGVM-PLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIME 128 (264)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 678889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|+ + |||+|+|+||++.|++........... ..
T Consensus 129 ~~~-~g~IV~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~-~~- 201 (264)
T 3tfo_A 129 AQR-SGQIINIGSIGALSV--VPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMA-AM- 201 (264)
T ss_dssp HHT-CEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-------------------
T ss_pred hCC-CeEEEEEcCHHHccc--CCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHH-HH-
Confidence 876 799999999999733 6888999999999999999999998 5 999999999999999876543222111 11
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
. ...+...+|+ |+|+++++|+++.....+|+++..++|+.+..
T Consensus 202 ~-~~~~~~~~pe-dvA~~v~~l~s~~~~~~~~~i~i~p~~~~~~~ 244 (264)
T 3tfo_A 202 D-TYRAIALQPA-DIARAVRQVIEAPQSVDTTEITIRPTASGNAE 244 (264)
T ss_dssp -------CCCHH-HHHHHHHHHHHSCTTEEEEEEEEEECC-----
T ss_pred H-hhhccCCCHH-HHHHHHHHHhcCCccCccceEEEecCcccccc
Confidence 0 1112235666 99999999999999999999999999987653
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=221.11 Aligned_cols=185 Identities=21% Similarity=0.345 Sum_probs=159.1
Q ss_pred ccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEee
Q 027744 20 EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLT 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~is 99 (219)
|. ++++++++++.+++|++|++|||||......++.+.+.++|++++++|+.+++.++++++|+|++++ .|+||++|
T Consensus 55 d~--~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is 131 (254)
T 1zmt_A 55 SE--QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFIT 131 (254)
T ss_dssp CC--CSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred CH--HHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEC
Confidence 66 7889999999999999999999999853557788899999999999999999999999999998765 79999999
Q ss_pred cccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc---------cCCCCccccchHHHHHHHHhhc
Q 027744 100 SIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH---------LQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 100 s~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v---------~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
|..+... .++...|+++|+++++|+++++.|++++||++|+|+||++ +|++.... . ..........
T Consensus 132 S~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--~-~~~~~~~~~~ 206 (254)
T 1zmt_A 132 SATPFGP--WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--P-EHVAHVKKVT 206 (254)
T ss_dssp CSTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--H-HHHHHHHHHS
T ss_pred CcccccC--CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--h-HHHHHHhccC
Confidence 9998733 5788999999999999999999999999999999999999 66554321 1 1222223557
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
|++++.+|+ |+|+++++|+++..++++|+++.+|||+.....
T Consensus 207 p~~~~~~p~-dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~ 248 (254)
T 1zmt_A 207 ALQRLGTQK-ELGELVAFLASGSCDYLTGQVFWLAGGFPMIER 248 (254)
T ss_dssp SSSSCBCHH-HHHHHHHHHHTTSCGGGTTCEEEESTTCCCCCC
T ss_pred CCCCCcCHH-HHHHHHHHHhCcccCCccCCEEEECCCchhhcc
Confidence 888888888 999999999999899999999999999876543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=220.30 Aligned_cols=197 Identities=20% Similarity=0.301 Sum_probs=168.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 63 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 139 (265)
T 1h5q_A 63 GVKTKAYQCDVSNT--DIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWL 139 (265)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCC-----CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGL-----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~-----~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+++..++||++||..+....+ ..+...|+++|++++.+++.++.|++++||++++|+||++.|++..... . ..
T Consensus 140 ~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~ 217 (265)
T 1h5q_A 140 QKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-K-KI 217 (265)
T ss_dssp HHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-H-HH
T ss_pred hcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-h-hH
Confidence 765358999999988763211 1127899999999999999999999999999999999999999876532 2 22
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........|++++.+|+ |+|+++++|+++...+++|+.+.+|||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 264 (265)
T 1h5q_A 218 RDHQASNIPLNRFAQPE-EMTGQAILLLSDHATYMTGGEYFIDGGQLI 264 (265)
T ss_dssp HHHHHHTCTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHHHHhcCcccCCCCHH-HHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence 22333567888888888 999999999998888999999999999864
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=221.53 Aligned_cols=196 Identities=23% Similarity=0.332 Sum_probs=146.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++.+|+++. ++++++++++.+.+ +++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|
T Consensus 62 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 138 (266)
T 1xq1_A 62 GFQVTGSVCDASLR--PEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 138 (266)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEECCCCCH--HHHHHHHHHHHHHhCCCCcEEEECCCCC-CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45789999999999 99999999999999 8999999999985 56677888999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .++||++||..+... .++...|+++|++++.++++++++++++||++++|+||++.|++....... ......
T Consensus 139 ~~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~ 214 (266)
T 1xq1_A 139 KASG-CGNIIFMSSIAGVVS--ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD-EFKKVV 214 (266)
T ss_dssp HHHS-SCEEEEEC------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------
T ss_pred HhcC-CcEEEEEccchhccC--CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH-HHHHHH
Confidence 8765 689999999988633 577889999999999999999999999999999999999999987653211 111222
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+++.
T Consensus 215 ~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~~ 258 (266)
T 1xq1_A 215 ISRKPLGRFGEPE-EVSSLVAFLCMPAASYITGQTICVDGGLTVN 258 (266)
T ss_dssp ---------CCGG-GGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHcCccccCccCcEEEEcCCcccc
Confidence 2446777888888 9999999999988889999999999998754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=221.66 Aligned_cols=194 Identities=23% Similarity=0.340 Sum_probs=166.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|+
T Consensus 92 ~~~~~~~~~Dl~d~--~~v~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 168 (285)
T 2c07_A 92 GYESSGYAGDVSKK--EEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI 168 (285)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCceeEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.++++++.|+++.||++++|+||++.|++..... . .......
T Consensus 169 ~~~-~~~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~ 243 (285)
T 2c07_A 169 NNR-YGRIINISSIVGLTG--NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-E-QIKKNII 243 (285)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-H-HHHHHHH
T ss_pred hCC-CCEEEEECChhhccC--CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-H-HHHHHHH
Confidence 765 689999999988633 5788999999999999999999999999999999999999999876432 2 2222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|.+++..|+ |+|+++++|+++...+++|+++.+|||+++
T Consensus 244 ~~~~~~~~~~~~-dvA~~~~~l~~~~~~~~~G~~i~v~gG~~~ 285 (285)
T 2c07_A 244 SNIPAGRMGTPE-EVANLACFLSSDKSGYINGRVFVIDGGLSP 285 (285)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred hhCCCCCCCCHH-HHHHHHHHHhCCCcCCCCCCEEEeCCCccC
Confidence 556788888887 999999999998888999999999999853
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=218.49 Aligned_cols=194 Identities=22% Similarity=0.334 Sum_probs=168.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+.++|+
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 126 (244)
T 1edo_A 50 GGQAITFGGDVSKE--ADVEAMMKTAIDAWGTIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM 126 (244)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 35788999999999 999999999999999999999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.+++.++.+++++||++++++||++.|++..... .. ......
T Consensus 127 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~-~~~~~~ 201 (244)
T 1edo_A 127 KKR-KGRIINIASVVGLIG--NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG-ED-MEKKIL 201 (244)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-HH-HHHHHH
T ss_pred hcC-CCEEEEECChhhcCC--CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC-hH-HHHHHh
Confidence 765 689999999988633 5788999999999999999999999999999999999999998765432 22 222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhc-cCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLI-SDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++..|+ |+|+++++|+ ++...+++|+++++|||+++
T Consensus 202 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~~G~~~~v~gG~~~ 244 (244)
T 1edo_A 202 GTIPLGRTGQPE-NVAGLVEFLALSPAASYITGQAFTIDGGIAI 244 (244)
T ss_dssp TSCTTCSCBCHH-HHHHHHHHHHHCSGGGGCCSCEEEESTTTTC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCCCccCCcCCCEEEeCCCccC
Confidence 556788888887 9999999999 67778899999999999863
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=218.81 Aligned_cols=196 Identities=20% Similarity=0.319 Sum_probs=166.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCC-CcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL-QVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||......++. +.+.++|++.+++|+.+++.+++.+++.|
T Consensus 82 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 159 (279)
T 3ctm_A 82 GVHSKAYKCNISDP--KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIF 159 (279)
T ss_dssp CSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCcceEEEeecCCH--HHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45788999999999 9999999999999999999999999863325666 78889999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .++||++||..+......++...|+++|++++.++++++.+++++| ++++|+||++.|++.... ..+.. ...
T Consensus 160 ~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~-~~~ 235 (279)
T 3ctm_A 160 KKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDMK-AKW 235 (279)
T ss_dssp HHHT-CCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHHH-HHH
T ss_pred HhcC-CCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHHH-HHH
Confidence 8765 6999999999886332146788999999999999999999999999 999999999999987532 22222 223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+
T Consensus 236 ~~~~p~~~~~~~~-dvA~~~~~l~s~~~~~~tG~~i~vdgG~~~ 278 (279)
T 3ctm_A 236 WQLTPLGREGLTQ-ELVGGYLYLASNASTFTTGSDVVIDGGYTC 278 (279)
T ss_dssp HHHSTTCSCBCGG-GTHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHhCCccCCcCHH-HHHHHHHHHhCccccCccCCEEEECCCeec
Confidence 3567888888998 999999999998888999999999999864
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=232.85 Aligned_cols=183 Identities=26% Similarity=0.324 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccc
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~ 102 (219)
++++++++++.+++|++|++|||||+.. ...++.+.+.++|++++++|+.+++.+++.++|+|++ +|+||++||..
T Consensus 105 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~ 181 (315)
T 2o2s_A 105 YTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE---GGSAVTLSYLA 181 (315)
T ss_dssp CSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE---EEEEEEEEEGG
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc---CCEEEEEeccc
Confidence 7899999999999999999999999752 2567788999999999999999999999999999965 48999999998
Q ss_pred ccccCCCCCc-chhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccc---h---HHHHHHHHhhcCCCC
Q 027744 103 GAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVG---Q---ERAVKLVREAAPLHR 174 (219)
Q Consensus 103 ~~~~~~~~~~-~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~---~---~~~~~~~~~~~~~~~ 174 (219)
+... .+++ ..|+++|+|+++|+++++.|+++ +|||+|+|+||+|.|++...... . +..........|+++
T Consensus 182 ~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 259 (315)
T 2o2s_A 182 AERV--VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRR 259 (315)
T ss_dssp GTSC--CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCC
T ss_pred cccc--CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCC
Confidence 8633 4565 58999999999999999999985 89999999999999987543211 0 112222234578899
Q ss_pred CCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 175 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
+.+|+ |+|++++||+++.+.++||+++.+|||+++..
T Consensus 260 ~~~pe-dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 296 (315)
T 2o2s_A 260 DLHSD-DVGGAALFLLSPLARAVSGVTLYVDNGLHAMG 296 (315)
T ss_dssp CCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred CCCHH-HHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence 89998 99999999999989999999999999987653
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=222.57 Aligned_cols=185 Identities=21% Similarity=0.207 Sum_probs=156.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.+++||++|. ++++++++++.+++|++|++|||||+. ...++ +.+.++|++++++|+.+++.++++++|+|++
T Consensus 59 ~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~-~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 134 (250)
T 3nyw_A 59 QEPIVLPLDITDC--TKADTEIKDIHQKYGAVDILVNAAAMF-MDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKV 134 (250)
T ss_dssp CCCEEEECCTTCH--HHHHHHHHHHHHHHCCEEEEEECCCCC-CCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcceEEeccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCcC-CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6789999999999 999999999999999999999999986 55566 7789999999999999999999999999988
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++..... .
T Consensus 135 ~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~ 201 (250)
T 3nyw_A 135 QK-NGYIFNVASRAAKYG--FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------T 201 (250)
T ss_dssp HT-CEEEEEECC---------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------C
T ss_pred CC-CeEEEEEccHHhcCC--CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------C
Confidence 76 799999999998743 3558899999999999999999999999999999999999998754321 2
Q ss_pred hcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCcccc
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 211 (219)
..+.+++.+|+ |+|++++||+++ ....+++.+|.+|||....
T Consensus 202 ~~~~~~~~~p~-dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~~ 244 (250)
T 3nyw_A 202 PFKDEEMIQPD-DLLNTIRCLLNLSENVCIKDIVFEMKKSIIEG 244 (250)
T ss_dssp CSCGGGSBCHH-HHHHHHHHHHTSCTTEECCEEEEEEHHHHHC-
T ss_pred CcccccCCCHH-HHHHHHHHHHcCCCceEeeEEEEEeecccccc
Confidence 34556777887 999999999996 4556677899999997543
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=217.65 Aligned_cols=194 Identities=22% Similarity=0.354 Sum_probs=166.5
Q ss_pred cce-EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPV-EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++ .++.+|++|. ++++++++++.+ ++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 57 ~~~~~~~~~D~~~~--~~~~~~~~~~~~-~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 132 (254)
T 2wsb_A 57 AAVAARIVADVTDA--EAMTAAAAEAEA-VAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMV 132 (254)
T ss_dssp GGEEEEEECCTTCH--HHHHHHHHHHHH-HSCCCEEEECCCCC-CCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccceeEEEEecCCH--HHHHHHHHHHHh-hCCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 355 8899999999 999999999988 89999999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+++ .++||++||..+... .+.. ..|+++|++++.++++++.+++++||++++|+||++.|++.......+.....
T Consensus 133 ~~~-~~~iv~isS~~~~~~--~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 209 (254)
T 2wsb_A 133 ARG-AGAIVNLGSMSGTIV--NRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFET 209 (254)
T ss_dssp HHT-CEEEEEECCGGGTSC--CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHH
T ss_pred hcC-CcEEEEEecchhccC--CCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHH
Confidence 876 799999999988643 3444 89999999999999999999999999999999999999976543222222223
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|.+++.+|+ |+|+++++|+++...+++|+++.+|||++.
T Consensus 210 ~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 253 (254)
T 2wsb_A 210 WLDMTPMGRCGEPS-EIAAAALFLASPAASYVTGAILAVDGGYTV 253 (254)
T ss_dssp HHHTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhcCCCCCCCCHH-HHHHHHHHHhCcccccccCCEEEECCCEec
Confidence 33556788888888 999999999998888999999999999753
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=236.36 Aligned_cols=183 Identities=25% Similarity=0.318 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccc
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~ 102 (219)
++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.++++++++++|+|++ +|+||++||..
T Consensus 118 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~ 194 (319)
T 2ptg_A 118 FTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYIA 194 (319)
T ss_dssp CSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEeccc
Confidence 6899999999999999999999999752 2567888999999999999999999999999999965 48999999998
Q ss_pred ccccCCCCCc-chhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccch--H----HHHHHHHhhcCCCC
Q 027744 103 GAERGLYPGA-AAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQ--E----RAVKLVREAAPLHR 174 (219)
Q Consensus 103 ~~~~~~~~~~-~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~--~----~~~~~~~~~~~~~~ 174 (219)
+... .+++ ..|+++|+|+++|+++++.|+++ +|||||+|+||+++|++....... + ..........|+++
T Consensus 195 ~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 272 (319)
T 2ptg_A 195 SEKV--IPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQK 272 (319)
T ss_dssp --------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------
T ss_pred cccc--cCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCC
Confidence 8633 4666 68999999999999999999985 899999999999999986543211 0 01111223467888
Q ss_pred CCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 175 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
+.+|+ |+|++++||+++.+.++||+++.+|||+++..
T Consensus 273 ~~~pe-evA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 309 (319)
T 2ptg_A 273 ELESD-DVGRAALFLLSPLARAVTGATLYVDNGLHAMG 309 (319)
T ss_dssp CCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCTTC-
T ss_pred CCCHH-HHHHHHHHHhCcccCCccCCEEEECCCceeec
Confidence 88888 99999999999989999999999999998754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=217.60 Aligned_cols=195 Identities=21% Similarity=0.317 Sum_probs=168.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.+++.|++
T Consensus 54 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 130 (251)
T 1zk4_A 54 DQIQFFQHDSSDE--DGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130 (251)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 5789999999999 999999999999999999999999986 5677888999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++.+++||++||..+... .++...|+++|++++.++++++.|+. +.||++++++||++.|++..... ........
T Consensus 131 ~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~ 207 (251)
T 1zk4_A 131 KGLGASIINMSSIEGFVG--DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQ 207 (251)
T ss_dssp SSSCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTS
T ss_pred cCCCCEEEEeCCchhccC--CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHH
Confidence 652389999999988733 57889999999999999999999998 88999999999999999765432 22222212
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++++.+|+ |+|+++++|+++...+++|+++.+|||+++
T Consensus 208 ~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 250 (251)
T 1zk4_A 208 RTKTPMGHIGEPN-DIAYICVYLASNESKFATGSEFVVDGGYTA 250 (251)
T ss_dssp TTTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhcCCCCCCcCHH-HHHHHHHHHcCcccccccCcEEEECCCccC
Confidence 2345777888887 999999999998888999999999999864
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=217.94 Aligned_cols=187 Identities=15% Similarity=0.060 Sum_probs=147.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+. |++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 55 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~-g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 130 (252)
T 3h7a_A 55 GGRIVARSLDARNE--DEVTAFLNAADAH-APLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRESARLML 130 (252)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHH-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECcCCCH--HHHHHHHHHHHhh-CCceEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 9999999999999 9999999999986 567888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEE-EEeecCCccCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV-NGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v-~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++|||+ |+|+||++.|++........ ....
T Consensus 131 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~--~~~~ 205 (252)
T 3h7a_A 131 AHG-QGKIFFTGATASLRG--GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM--FGKD 205 (252)
T ss_dssp HHT-CEEEEEEEEGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------
T ss_pred hcC-CcEEEEECCHHHcCC--CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh--hhhh
Confidence 876 799999999998733 68899999999999999999999999999999 99999999999887643321 1122
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
....|.+ +.+|+ |+|+++++|+++....++|++..-.
T Consensus 206 ~~~~~~~-~~~pe-dvA~~~~~l~s~~~~~~~~~i~~~~ 242 (252)
T 3h7a_A 206 ALANPDL-LMPPA-AVAGAYWQLYQQPKSAWTFEMEIRP 242 (252)
T ss_dssp ---------CCHH-HHHHHHHHHHHCCGGGBCSEEEEBC
T ss_pred hhcCCcc-CCCHH-HHHHHHHHHHhCchhcceeeEEeee
Confidence 2445665 77887 9999999999988888899876543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=218.92 Aligned_cols=192 Identities=17% Similarity=0.171 Sum_probs=148.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.+++||++|+ ++++++++++.+++|++|+||||||+..+..++.+.+.++|++.+++|+.+++.++++++|.|++
T Consensus 74 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 151 (272)
T 4dyv_A 74 DDALCVPTDVTDP--DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKA 151 (272)
T ss_dssp SCCEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 5788999999999 99999999999999999999999998645578889999999999999999999999999999987
Q ss_pred cC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++ ++|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++......... .. .
T Consensus 152 ~~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~-~ 226 (272)
T 4dyv_A 152 QEPRGGRIINNGSISATSP--RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP--QA-D 226 (272)
T ss_dssp SSSCCEEEEEECCSSTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------
T ss_pred CCCCCcEEEEECchhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch--hh-h
Confidence 64 2589999999999733 68889999999999999999999999999999999999999998765432211 11 1
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+.+++.+|+ |+|++++||++.......++.....++.
T Consensus 227 ~~~~~~~~~~pe-dvA~~v~fL~s~~~~~~~~~i~i~~~~~ 266 (272)
T 4dyv_A 227 LSIKVEPVMDVA-HVASAVVYMASLPLDANVQFMTIMATKM 266 (272)
T ss_dssp ---------CHH-HHHHHHHHHHHSCTTSCCCEEEEEEC--
T ss_pred hcccccCCCCHH-HHHHHHHHHhCCCCcCccceEEEeccCc
Confidence 345667778887 9999999999976655555555444444
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=219.61 Aligned_cols=194 Identities=24% Similarity=0.320 Sum_probs=163.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC-----CCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-----LQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
+.++.+++||++|. ++++++++++ ++++++|++|||++.......+ .+.+.++|++.+++|+.+++++++.+
T Consensus 75 ~~~~~~~~~Dl~~~--~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 151 (281)
T 3ppi_A 75 GNRAEFVSTNVTSE--DSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLV 151 (281)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 45789999999999 9999999999 7889999999994432343433 46889999999999999999999999
Q ss_pred HHHHHhc-----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 83 GRRMKES-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 83 ~~~l~~~-----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
++.|.+. +.+|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++.....
T Consensus 152 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 229 (281)
T 3ppi_A 152 AASIAAAEPRENGERGALVLTASIAGYEG--QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG 229 (281)
T ss_dssp HHHHHTSCCCTTSCCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC
T ss_pred HHHHHhhcccccCCCeEEEEEecccccCC--CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc
Confidence 9999862 22689999999999733 6888999999999999999999999999999999999999999876542
Q ss_pred chHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+.. .......++ +++.+|+ |+|+++++|+++ .+++|+++.+|||+++.
T Consensus 230 -~~~~-~~~~~~~~~~~~~~~pe-dvA~~v~~l~s~--~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 230 -EEAL-AKFAANIPFPKRLGTPD-EFADAAAFLLTN--GYINGEVMRLDGAQRFT 279 (281)
T ss_dssp -HHHH-HHHHHTCCSSSSCBCHH-HHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred -HHHH-HHHHhcCCCCCCCCCHH-HHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence 2222 233356676 7888888 999999999974 68999999999999865
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=217.69 Aligned_cols=194 Identities=26% Similarity=0.388 Sum_probs=149.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 54 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 130 (247)
T 2hq1_A 54 GINVVVAKGDVKNP--EDVENMVKTAMDAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIML 130 (247)
T ss_dssp TCCEEEEESCTTSH--HHHHHHHHHHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 556777888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.+++++++++++.||++++++||++.|++.... ... ......
T Consensus 131 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~-~~~~~~ 205 (247)
T 2hq1_A 131 KQK-SGKIINITSIAGIIG--NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL-PDK-VKEMYL 205 (247)
T ss_dssp HHT-CEEEEEECC-----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHH-HHHHHH
T ss_pred hcC-CcEEEEEcChhhccC--CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc-chH-HHHHHH
Confidence 765 689999999877633 477899999999999999999999999999999999999999875432 222 222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++++.+|+ |+|+++++++++...+++|+++++|||+++
T Consensus 206 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 247 (247)
T 2hq1_A 206 NNIPLKRFGTPE-EVANVVGFLASDDSNYITGQVINIDGGLVM 247 (247)
T ss_dssp TTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred hhCCCCCCCCHH-HHHHHHHHHcCcccccccCcEEEeCCCccC
Confidence 456778888888 999999999998778899999999999863
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=214.09 Aligned_cols=195 Identities=23% Similarity=0.374 Sum_probs=168.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|+ ++++++++++.+.++++|++|||||.. ...++ +.+.++|++.+++|+.+++.+++.++|.|+
T Consensus 59 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 134 (255)
T 1fmc_A 59 GGQAFACRCDITSE--QELSALADFAISKLGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEME 134 (255)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 44455 688999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.+++.+++++++.||++++++||++.|++.......... ....
T Consensus 135 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~ 210 (255)
T 1fmc_A 135 KNG-GGVILTITSMAAENK--NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE-QKML 210 (255)
T ss_dssp HHT-CEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHH-HHHH
T ss_pred hcC-CcEEEEEcchhhcCC--CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHH-HHHH
Confidence 765 689999999988633 577889999999999999999999999999999999999999876543332222 2233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...|++++..|+ |+|+++++++++...+++|+++++|||...+
T Consensus 211 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s 253 (255)
T 1fmc_A 211 QHTPIRRLGQPQ-DIANAALFLCSPAASWVSGQILTVSGGGVQE 253 (255)
T ss_dssp HTCSSCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred hcCCcccCCCHH-HHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence 567888888888 9999999999987788999999999998754
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=219.95 Aligned_cols=191 Identities=15% Similarity=0.152 Sum_probs=160.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHH--HhCCCc--EEEeccccCCC-CCCCCC-cCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQ--ILGNLD--AFVHCYTYEGK-MQDPLQ-VGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~g~id--~lv~~ag~~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.++.++++|++|+ ++++++++++.+ .+|++| +||||||+... ..++.+ .+.++|++++++|+.+++++++.
T Consensus 59 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 136 (259)
T 1oaa_A 59 DLKVVLAAADLGTE--AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136 (259)
T ss_dssp TSEEEEEECCTTSH--HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCeEEEEecCCCCH--HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999988 678899 99999998533 245667 68999999999999999999999
Q ss_pred HHHHHHhc-CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--
Q 027744 82 VGRRMKES-KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-- 158 (219)
Q Consensus 82 ~~~~l~~~-~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-- 158 (219)
++|.|+++ +..|+||++||..+... .++...|+++|+|+++|+++++.|+++ ||+|+|+||++.|++......
T Consensus 137 ~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~ 212 (259)
T 1oaa_A 137 TLNAFQDSPGLSKTVVNISSLCALQP--YKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETS 212 (259)
T ss_dssp HHHTSCCCTTCEEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHC
T ss_pred HHHHHhhccCCCceEEEEcCchhcCC--CCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhcc
Confidence 99999875 12689999999998733 678899999999999999999999974 999999999999998654221
Q ss_pred -hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 159 -QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.+..........|++++.+|+ |+|+.+++|+++ .+++||+++.+||
T Consensus 213 ~~~~~~~~~~~~~p~~~~~~p~-dvA~~v~~l~~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 213 KDPELRSKLQKLKSDGALVDCG-TSAQKLLGLLQK-DTFQSGAHVDFYD 259 (259)
T ss_dssp SCHHHHHHHHHHHHTTCSBCHH-HHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred CChhHHHHHHHhhhcCCcCCHH-HHHHHHHHHHhh-ccccCCcEEeccC
Confidence 122223333556788888988 999999999985 6899999999986
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=214.18 Aligned_cols=185 Identities=21% Similarity=0.241 Sum_probs=156.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|+||||||......++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 77 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 154 (262)
T 3rkr_A 77 GGEAESHACDLSHS--DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMI 154 (262)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceeEEEecCCCH--HHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56789999999999 9999999999999999999999999854667888899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .|+||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++.....
T Consensus 155 ~~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------- 221 (262)
T 3rkr_A 155 AAK-RGHIINISSLAGKNP--VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS---------- 221 (262)
T ss_dssp HTT-CCEEEEECSSCSSCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------
T ss_pred hCC-CceEEEEechhhcCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc----------
Confidence 876 799999999999733 6888999999999999999999999999999999999999999865432
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+..+...|+ |+|+++++|+++....++|+++..+.|.
T Consensus 222 ~~~~~~~~~~p~-dvA~~v~~l~s~~~~~~~g~~~i~p~~~ 261 (262)
T 3rkr_A 222 AKKSALGAIEPD-DIADVVALLATQADQSFISEVLVRPTLK 261 (262)
T ss_dssp -------CCCHH-HHHHHHHHHHTCCTTCCEEEEEEECCCC
T ss_pred cccccccCCCHH-HHHHHHHHHhcCccccccCcEEeccccC
Confidence 122345566777 9999999999999999999999888764
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-33 Score=213.21 Aligned_cols=179 Identities=22% Similarity=0.328 Sum_probs=155.4
Q ss_pred ecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeE
Q 027744 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSI 95 (219)
Q Consensus 16 ~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~i 95 (219)
+|++|+ +++++++++ ++++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++ +|+|
T Consensus 42 ~D~~~~--~~v~~~~~~----~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~i 112 (223)
T 3uce_A 42 LDISDE--KSVYHYFET----IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSI 112 (223)
T ss_dssp CCTTCH--HHHHHHHHH----HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEE
T ss_pred cCCCCH--HHHHHHHHH----hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEE
Confidence 899999 888888765 4899999999998656778899999999999999999999999999999865 4899
Q ss_pred EEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH--HHHHHHHhhcCCC
Q 027744 96 VFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE--RAVKLVREAAPLH 173 (219)
Q Consensus 96 v~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~ 173 (219)
|++||..+... .++...|+++|+++++|++++++|+++ ||+|+|+||++.|++........ ..........|++
T Consensus 113 v~~sS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (223)
T 3uce_A 113 TLTSGMLSRKV--VANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG 188 (223)
T ss_dssp EEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTC
T ss_pred EEecchhhccC--CCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCC
Confidence 99999998733 688899999999999999999999987 99999999999999876543322 2223344678899
Q ss_pred CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 174 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
++.+|+ |+|++++++++ ++++||+++.+|||+.+
T Consensus 189 ~~~~~~-dvA~~~~~l~~--~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 189 KVGEAS-DIAMAYLFAIQ--NSYMTGTVIDVDGGALL 222 (223)
T ss_dssp SCBCHH-HHHHHHHHHHH--CTTCCSCEEEESTTGGG
T ss_pred CccCHH-HHHHHHHHHcc--CCCCCCcEEEecCCeec
Confidence 999998 99999999997 57899999999999875
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=211.00 Aligned_cols=186 Identities=20% Similarity=0.299 Sum_probs=158.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 55 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 131 (247)
T 2jah_A 55 GAKVHVLELDVADR--QGVDAAVASTVEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLL 131 (247)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ |+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++........ .....
T Consensus 132 ~~~--g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~- 205 (247)
T 2jah_A 132 RSK--GTVVQMSSIAGRVN--VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMY- 205 (247)
T ss_dssp HHT--CEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHH-
T ss_pred HCC--CEEEEEccHHhcCC--CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh-hHHHH-
Confidence 764 89999999998733 5788999999999999999999999999999999999999999865432222 22222
Q ss_pred hhcCCCCC--CCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 168 EAAPLHRW--LDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 168 ~~~~~~~~--~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
...| +++ .+|+ |+|+++++|+++...+++++. .++
T Consensus 206 ~~~~-~~~~~~~pe-dvA~~v~~l~s~~~~~~~~~i-~i~ 242 (247)
T 2jah_A 206 EQRI-SQIRKLQAQ-DIAEAVRYAVTAPHHATVHEI-FIR 242 (247)
T ss_dssp HHHT-TTSCCBCHH-HHHHHHHHHHHSCTTEEEEEE-EEE
T ss_pred Hhcc-cccCCCCHH-HHHHHHHHHhCCCccCccceE-Eec
Confidence 2233 454 6777 999999999998888877774 444
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-33 Score=215.26 Aligned_cols=194 Identities=21% Similarity=0.314 Sum_probs=160.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCC------CcCHHHHHHHHHhhhchHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL------QVGEDEFKKLVKINFVAPWFLLKA 81 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~ 81 (219)
+.++.++++|++|+ ++++++++++.+.++++|+||||||.. ...++. +.+.++|++.+++|+.+++.+++.
T Consensus 57 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~ 133 (265)
T 2o23_A 57 GNNCVFAPADVTSE--KDVQTALALAKGKFGRVDVAVNCAGIA-VASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 133 (265)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCceEEEEcCCCCH--HHHHHHHHHHHHHCCCCCEEEECCccC-CCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence 34789999999999 999999999999999999999999985 333333 378899999999999999999999
Q ss_pred HHHHHHhcC-----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 82 VGRRMKESK-----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 82 ~~~~l~~~~-----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
+.+.|+++. ..++||++||..+... .++...|+++|++++.+++.++.+++++||++++|+||++.|++....
T Consensus 134 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 211 (265)
T 2o23_A 134 VAGEMGQNEPDQGGQRGVIINTASVAAFEG--QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 211 (265)
T ss_dssp HHHHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred HHHHHHhcccccCCCCcEEEEeCChhhcCC--CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence 999998761 2689999999988733 578899999999999999999999999999999999999999987643
Q ss_pred cchHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 VGQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. + .........|. +++.+|+ |+|+.+++|++ +++++|+++.+|||+++.
T Consensus 212 ~~-~-~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~--~~~~~G~~i~vdgG~~~~ 262 (265)
T 2o23_A 212 PE-K-VCNFLASQVPFPSRLGDPA-EYAHLVQAIIE--NPFLNGEVIRLDGAIRMQ 262 (265)
T ss_dssp -------CHHHHTCSSSCSCBCHH-HHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred CH-H-HHHHHHHcCCCcCCCCCHH-HHHHHHHHHhh--cCccCceEEEECCCEecC
Confidence 21 1 11222345676 7788887 99999999995 568999999999998764
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=214.11 Aligned_cols=199 Identities=26% Similarity=0.365 Sum_probs=168.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++++|++|. ++++++++++.+.++++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 64 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 141 (278)
T 2bgk_A 64 DVISFVHCDVTKD--EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI 141 (278)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG
T ss_pred CceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3789999999999 99999999999999999999999997532 35677889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCC-CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYP-GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~-~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~ 164 (219)
+++ .++||++||..++.. .+ +...|+++|++++.+++.++.|++++||++++++||++.|++...... ......
T Consensus 142 ~~~-~~~iv~isS~~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~ 218 (278)
T 2bgk_A 142 PAK-KGSIVFTASISSFTA--GEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE 218 (278)
T ss_dssp GGT-CEEEEEECCGGGTCC--CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH
T ss_pred hcC-CCeEEEEeeccccCC--CCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHH
Confidence 765 789999999988733 34 778999999999999999999999999999999999999998765432 122222
Q ss_pred HHHh-hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 165 LVRE-AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 165 ~~~~-~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
.... ..+.+++..|+ |+|+++++|+++...+++|+++.+|||+.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~ 267 (278)
T 2bgk_A 219 LAHQAANLKGTLLRAE-DVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 267 (278)
T ss_dssp HHHHTCSSCSCCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred hhhcccccccccCCHH-HHHHHHHHHcCcccccCCCCEEEECCcccccCC
Confidence 2211 23456778887 999999999998888999999999999987644
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-33 Score=214.11 Aligned_cols=180 Identities=21% Similarity=0.297 Sum_probs=157.2
Q ss_pred cceEEEEecC--CccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl--~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.++.++.+|+ ++. ++++++++++.+.+|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|+|
T Consensus 64 ~~~~~~~~d~d~~~~--~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 141 (247)
T 3i1j_A 64 PQPLIIALNLENATA--QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLL 141 (247)
T ss_dssp CCCEEEECCTTTCCH--HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEeccccCCH--HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4677788888 888 999999999999999999999999986566788899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
++++ .++||++||..+... .++...|+++|+|+++|+++++.|+.+ .|||+++|+||+++|++.....+
T Consensus 142 ~~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~------- 211 (247)
T 3i1j_A 142 KRSE-DASIAFTSSSVGRKG--RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP------- 211 (247)
T ss_dssp TTSS-SEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST-------
T ss_pred HhCC-CCeEEEEcchhhcCC--CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc-------
Confidence 8766 789999999998733 688899999999999999999999976 89999999999999987543221
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.....+...|+ |+|+.++||+++.++++||++|++
T Consensus 212 ---~~~~~~~~~p~-dva~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 212 ---DENPLNNPAPE-DIMPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp ---TSCGGGSCCGG-GGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred ---ccCccCCCCHH-HHHHHHHHHhCchhccccCeeecC
Confidence 11223456777 999999999999999999999986
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=220.39 Aligned_cols=198 Identities=17% Similarity=0.267 Sum_probs=167.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 75 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 151 (302)
T 1w6u_A 75 GNKVHAIQCDVRDP--DMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLI 151 (302)
T ss_dssp SSCEEEEECCTTCH--HHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999985 566777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC-CCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~-~~~~~~~~~~~~~~~ 166 (219)
++...++||++||..+... .++...|+++|++++.++++++.+++++||++++++||++.|+ +..............
T Consensus 152 ~~~~~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 229 (302)
T 1w6u_A 152 KAQKGAAFLSITTIYAETG--SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM 229 (302)
T ss_dssp HTTCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred HhcCCCEEEEEcccccccC--CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHH
Confidence 4433689999999988633 5788999999999999999999999999999999999999998 433322222221223
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....|++++.+|+ |+|+++++|+++...+++|+++++|||+.+.
T Consensus 230 ~~~~p~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 273 (302)
T 1w6u_A 230 IGRIPCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGGEEVL 273 (302)
T ss_dssp HTTCTTSSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred HhcCCcCCCCCHH-HHHHHHHHHcCCcccccCCCEEEECCCeeec
Confidence 3557888888888 9999999999988889999999999998765
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=212.60 Aligned_cols=193 Identities=20% Similarity=0.365 Sum_probs=167.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~ 132 (248)
T 2pnf_A 56 GVKAHGVEMNLLSE--ESINKAFEEIYNLVDGIDILVNNAGIT-RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMI 132 (248)
T ss_dssp CCCEEEEECCTTCH--HHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999985 556777889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.+++.++++++++||++++++||++.|++.... .. .......
T Consensus 133 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~ 207 (248)
T 2pnf_A 133 KQR-WGRIVNISSVVGFTG--NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-SE-EIKQKYK 207 (248)
T ss_dssp HHT-CEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CH-HHHHHHH
T ss_pred hcC-CcEEEEEccHHhcCC--CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-cH-HHHHHHH
Confidence 765 689999999877633 477889999999999999999999999999999999999999987643 22 2222233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|.+++.+|+ |+|+++++++++...+++|+++.+|||+.
T Consensus 208 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 248 (248)
T 2pnf_A 208 EQIPLGRFGSPE-EVANVVLFLCSELASYITGEVIHVNGGMF 248 (248)
T ss_dssp HTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred hcCCCCCccCHH-HHHHHHHHHhCchhhcCCCcEEEeCCCcC
Confidence 456778888887 99999999999877899999999999973
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-33 Score=215.60 Aligned_cols=196 Identities=24% Similarity=0.375 Sum_probs=162.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCC-cEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNL-DAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.+++++++|++|. ++++++++++.+.+|++ |++|||||.. ...++.+.+.++|++.+++|+.+++++++.+.+.|+
T Consensus 63 ~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~i~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 139 (264)
T 2pd6_A 63 GNHAAFQADVSEA--RAARCLLEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALV 139 (264)
T ss_dssp -CCEEEECCTTSH--HHHHHHHHHHHHHHSSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cceEEEEecCCCH--HHHHHHHHHHHHHhCCCCeEEEECCCcC-CCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 5789999999999 99999999999999999 9999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++..|+||++||..+... .++...|+++|++++.+++.++.+++++||++++++||++.|++...... . ......
T Consensus 140 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~ 215 (264)
T 2pd6_A 140 SNGCRGSIINISSIVGKVG--NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ-K-VVDKIT 215 (264)
T ss_dssp HHTCCEEEEEECCTHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTG
T ss_pred hcCCCceEEEECChhhccC--CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH-H-HHHHHH
Confidence 7542489999999987633 57889999999999999999999999999999999999999998654221 1 111222
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...|++++.+|+ |+|+++++++++...+++|+++.+|||+.+..
T Consensus 216 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 259 (264)
T 2pd6_A 216 EMIPMGHLGDPE-DVADVVAFLASEDSGYITGTSVEVTGGLFMAE 259 (264)
T ss_dssp GGCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC----
T ss_pred HhCCCCCCCCHH-HHHHHHHHHcCCcccCCCCCEEEECCCceecc
Confidence 445777888887 99999999999888899999999999987653
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=213.58 Aligned_cols=192 Identities=17% Similarity=0.205 Sum_probs=152.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|+ ++++++++++.+++|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|+|++
T Consensus 46 ~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 123 (248)
T 3asu_A 46 DNLYIAQLDVRNR--AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE 123 (248)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4688999999999 99999999999999999999999998533567788999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc-CCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~ 167 (219)
++ .|+||++||..+... .++...|+++|+++++|+++++.|++++|||+|+|+||++. |++......... ....
T Consensus 124 ~~-~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~--~~~~ 198 (248)
T 3asu_A 124 RN-HGHIINIGSTAGSWP--YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD--GKAE 198 (248)
T ss_dssp HT-CCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------
T ss_pred cC-CceEEEEccchhccC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch--HHHH
Confidence 65 699999999998733 57889999999999999999999999999999999999999 998643211000 0000
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.........+|+ |+|++++||+++ ..+++|+.+.++++..
T Consensus 199 ~~~~~~~~~~p~-dvA~~v~~l~s~-~~~~~g~~i~v~~~~~ 238 (248)
T 3asu_A 199 KTYQNTVALTPE-DVSEAVWWVSTL-PAHVNINTLEMMPVTQ 238 (248)
T ss_dssp ------CCBCHH-HHHHHHHHHHHS-CTTCCCCEEEECCTTC
T ss_pred HHHhccCCCCHH-HHHHHHHHHhcC-CccceeeEEEEccccc
Confidence 111111234666 999999999996 5689999999998743
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=211.02 Aligned_cols=192 Identities=26% Similarity=0.385 Sum_probs=166.3
Q ss_pred cceEE-EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEV-VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.. +.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 51 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 127 (245)
T 2ph3_A 51 SPLVAVLGANLLEA--EAATALVHQAAEVLGGLDTLVNNAGIT-RDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMM 127 (245)
T ss_dssp CSCEEEEECCTTSH--HHHHHHHHHHHHHHTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccCCCH--HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 45666 99999999 999999999999999999999999986 556778889999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.+++++++++.++||++++++||++.|++.... .... .....
T Consensus 128 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~-~~~~~ 202 (245)
T 2ph3_A 128 KAR-FGRIVNITSVVGILG--NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-PQEV-KEAYL 202 (245)
T ss_dssp HHT-CEEEEEECCTHHHHC--CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHH-HHHHH
T ss_pred hcC-CCEEEEEeChhhccC--CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-CHHH-HHHHH
Confidence 765 689999999987633 577899999999999999999999999999999999999999876542 2222 22233
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|.+++.+++ |+|+++++++++...+++|+++.+|||+.
T Consensus 203 ~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 243 (245)
T 2ph3_A 203 KQIPAGRFGRPE-EVAEAVAFLVSEKAGYITGQTLCVDGGLT 243 (245)
T ss_dssp HTCTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCS
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCcccccccCCEEEECCCCC
Confidence 556778888887 99999999999877889999999999975
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=211.12 Aligned_cols=177 Identities=13% Similarity=0.120 Sum_probs=146.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++++|++|+ ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+++
T Consensus 50 ~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 126 (235)
T 3l6e_A 50 AVIGIVADLAHH--EDVDVAFAAAVEWGGLPELVLHCAGTG-EFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER 126 (235)
T ss_dssp GEEEEECCTTSH--HHHHHHHHHHHHHHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CceEEECCCCCH--HHHHHHHHHHHHhcCCCcEEEECCCCC-CCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 689999999999 999999999999999999999999985 67788899999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ ++||++||..+... .++...|+++|+|+++|+++++.|++++|||+|+|+||++.|++......
T Consensus 127 ~--~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------- 191 (235)
T 3l6e_A 127 G--GVLANVLSSAAQVG--KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------- 191 (235)
T ss_dssp C--EEEEEECCEECCSS--CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------
T ss_pred C--CEEEEEeCHHhcCC--CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------
Confidence 4 69999999998733 67889999999999999999999999999999999999999998754321
Q ss_pred cCCCCCCCCchhHHHHHHHhcc-CCCCcccceEEEec
Q 027744 170 APLHRWLDVKNDLASTVIYLIS-DGSRYMTGTTIYVD 205 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~d 205 (219)
.+..++.+|+ |+|+.++++++ +...+++|-.+.-.
T Consensus 192 ~~~~~~~~pe-dvA~~v~~l~~~~~~~~i~~i~~~~~ 227 (235)
T 3l6e_A 192 VDPSGFMTPE-DAAAYMLDALEARSSCHVTDLFIGRN 227 (235)
T ss_dssp -----CBCHH-HHHHHHHHHTCCCSSEEEEEEEEEEC
T ss_pred CCCcCCCCHH-HHHHHHHHHHhCCCCcceeeEEEecC
Confidence 2234667777 99999999998 56677777655443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=210.81 Aligned_cols=191 Identities=23% Similarity=0.350 Sum_probs=160.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
...++.+|++|. ++++++++ .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|+++
T Consensus 53 ~~~~~~~D~~~~--~~~~~~~~----~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 125 (244)
T 3d3w_A 53 GIEPVCVDLGDW--EATERALG----SVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125 (244)
T ss_dssp TCEEEECCTTCH--HHHHHHHT----TCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCH--HHHHHHHH----HcCCCCEEEECCccC-CCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 356779999998 88887776 568899999999985 55677788999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+..++||++||..+... .++...|+++|++++.+++++++|++++||++++++||++.|++.......+.........
T Consensus 126 ~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 203 (244)
T 3d3w_A 126 GVPGAIVNVSSQCSQRA--VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR 203 (244)
T ss_dssp TCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHT
T ss_pred CCCcEEEEeCchhhccC--CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhh
Confidence 42589999999988633 5778999999999999999999999999999999999999999865432221121222355
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.|.+++.+|+ |+|+++++++++...+++|+++.+|||++.
T Consensus 204 ~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 204 IPLGKFAEVE-HVVNAILFLLSDRSGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp CTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCCCCcCHH-HHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence 6888888888 999999999998778899999999999864
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=216.56 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=166.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++++++++++.+.
T Consensus 71 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 147 (303)
T 1yxm_A 71 QARVIPIQCNIRNE--EEVNNLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWM 147 (303)
T ss_dssp CCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTH
T ss_pred CccEEEEecCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 56899999999999 999999999999999999999999975 556778889999999999999999999999999765
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~ 165 (219)
+++ .++||++||.. . .+ .+....|+++|+++.+++++++.++.++||++++|+||++.|++...... .+.....
T Consensus 148 ~~~-~~~iv~isS~~-~-~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 223 (303)
T 1yxm_A 148 KEH-GGSIVNIIVPT-K-AG-FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG 223 (303)
T ss_dssp HHH-CEEEEEECCCC-T-TC-CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT
T ss_pred Hhc-CCeEEEEEeec-c-cC-CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHH
Confidence 544 68999999987 4 33 57889999999999999999999999999999999999999994221111 0111111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.....|.+++..|+ |+|+++++|+++...+++|+++.+|||+.+..
T Consensus 224 ~~~~~p~~~~~~~~-dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~~ 269 (303)
T 1yxm_A 224 SFQKIPAKRIGVPE-EVSSVVCFLLSPAASFITGQSVDVDGGRSLYT 269 (303)
T ss_dssp GGGGSTTSSCBCTH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred HHhcCcccCCCCHH-HHHHHHHHHhCcccccCCCcEEEECCCeeccc
Confidence 22446778888888 99999999999888899999999999987653
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=210.65 Aligned_cols=186 Identities=24% Similarity=0.275 Sum_probs=157.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++ +|+ . ++++++++++ .++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+++
T Consensus 61 ~~~~~-~D~--~--~~~~~~~~~~----~~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (249)
T 1o5i_A 61 HRYVV-CDL--R--KDLDLLFEKV----KEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK 130 (249)
T ss_dssp SEEEE-CCT--T--TCHHHHHHHS----CCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEE-eeH--H--HHHHHHHHHh----cCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46667 999 4 6677776655 4799999999985 56678889999999999999999999999999999887
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .|+||++||..++.. .++...|+++|++++.++++++.|++++||++++|+||++.|++...... ..........
T Consensus 131 ~-~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~ 206 (249)
T 1o5i_A 131 G-WGRIVAITSFSVISP--IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQ 206 (249)
T ss_dssp T-CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTT
T ss_pred C-CcEEEEEcchHhcCC--CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccch-hhHHHHHHhc
Confidence 5 689999999998733 57889999999999999999999999999999999999999998654322 2222023356
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.|++++.+|+ |+|+++++|+++...+++|+++.+|||+..
T Consensus 207 ~p~~~~~~~~-dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~ 246 (249)
T 1o5i_A 207 IPMRRMAKPE-EIASVVAFLCSEKASYLTGQTIVVDGGLSK 246 (249)
T ss_dssp STTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred CCCCCCcCHH-HHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence 7888888888 999999999998888999999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=236.44 Aligned_cols=181 Identities=20% Similarity=0.229 Sum_probs=152.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..+.+|++ ++.+++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.++++++|+++|+|+
T Consensus 368 g~~~~~~~~Dv~----~~~~~~~~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~ 442 (604)
T 2et6_A 368 GGEAWPDQHDVA----KDSEAIIKNVIDKYGTIDILVNNAGIL-RDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFV 442 (604)
T ss_dssp TCEEEEECCCHH----HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcChH----HHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 456788889993 234678899999999999999999986 567889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||.++.. + .+++..|+++|+|+.+|+++++.|++++|||||+|+||. .|++.......+
T Consensus 443 ~~~-~G~IVnisS~ag~~-~-~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~~------- 511 (604)
T 2et6_A 443 EKQ-FGRIINITSTSGIY-G-NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMREQ------- 511 (604)
T ss_dssp HTT-CEEEEEECCHHHHS-C-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC---------------
T ss_pred HcC-CCEEEEECChhhcc-C-CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCchh-------
Confidence 765 79999999999873 3 578899999999999999999999999999999999995 998865421110
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....+|+ |+|++++||+|+.+. +||+++.+|||+..
T Consensus 512 ----~~~~~~pe-~vA~~v~~L~s~~~~-itG~~~~vdGG~~~ 548 (604)
T 2et6_A 512 ----DKNLYHAD-QVAPLLVYLGTDDVP-VTGETFEIGGGWIG 548 (604)
T ss_dssp -----CCSSCGG-GTHHHHHHTTSTTCC-CCSCEEEEETTEEE
T ss_pred ----hccCCCHH-HHHHHHHHHhCCccC-CCCcEEEECCCeeE
Confidence 12335676 999999999999888 99999999999865
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=214.71 Aligned_cols=192 Identities=18% Similarity=0.260 Sum_probs=153.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. ++++++++++.+.+|++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|.|++
T Consensus 69 ~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~ 146 (272)
T 2nwq_A 69 TRVLPLTLDVRDR--AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIA 146 (272)
T ss_dssp SCEEEEECCTTCH--HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCH--HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999999 99999999999999999999999998533477888999999999999999999999999999988
Q ss_pred cCCCC-eEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGG-SIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g-~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
++ .| +||++||..+... .++...|+++|+++++|+++++.|++++|||+|+|+||++.|++......... ....
T Consensus 147 ~~-~g~~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~ 221 (272)
T 2nwq_A 147 HG-AGASIVNLGSVAGKWP--YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYD 221 (272)
T ss_dssp HC-TTCEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------
T ss_pred cC-CCcEEEEeCCchhccC--CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHH
Confidence 75 57 9999999998733 57889999999999999999999999999999999999999998653211110 0000
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.........+|+ |+|+++++|+++ ..+++|+.+.+|+|..
T Consensus 222 ~~~~~~~~~~pe-dvA~~v~~l~s~-~~~~~g~~i~v~~~~~ 261 (272)
T 2nwq_A 222 KTYAGAHPIQPE-DIAETIFWIMNQ-PAHLNINSLEIMPVSQ 261 (272)
T ss_dssp ----CCCCBCHH-HHHHHHHHHHTS-CTTEEEEEEEEEETTE
T ss_pred HhhccCCCCCHH-HHHHHHHHHhCC-CccCccceEEEeeccC
Confidence 111112235666 999999999996 5789999999999854
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=211.08 Aligned_cols=196 Identities=17% Similarity=0.243 Sum_probs=167.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|+ ++++++++++.+.++++|++|||||......++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 56 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T 3afn_B 56 GGDAAFFAADLATS--EACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133 (258)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999999733567778889999999999999999999999999997
Q ss_pred hcC----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 88 ESK----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 88 ~~~----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
+++ ..++||++||..+...+ .++...|+++|++++.+++.++++++++||++++++||++.|++.... . +...
T Consensus 134 ~~~~~~~~~~~iv~~sS~~~~~~~-~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-~~~~ 210 (258)
T 3afn_B 134 AAAKASGQTSAVISTGSIAGHTGG-GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-T-QDVR 210 (258)
T ss_dssp HHHHHHTSCEEEEEECCTHHHHCC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-C-HHHH
T ss_pred hcccCCCCCcEEEEecchhhccCC-CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-C-HHHH
Confidence 542 12899999999886312 578899999999999999999999999999999999999999986543 1 2222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCC-cccceEEEecCCcc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSR-YMTGTTIYVDGAQS 209 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dgG~~ 209 (219)
.......|++++.+++ |+|+++++++++... +++|+++++|||+.
T Consensus 211 ~~~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~~G~~~~v~gg~~ 256 (258)
T 3afn_B 211 DRISNGIPMGRFGTAE-EMAPAFLFFASHLASGYITGQVLDINGGQY 256 (258)
T ss_dssp HHHHTTCTTCSCBCGG-GTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred HHHhccCCCCcCCCHH-HHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence 2233556788888888 999999999987666 89999999999985
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=215.01 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=152.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+.+++||++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++++++|+.+++.++++++|.|+++
T Consensus 84 ~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 161 (281)
T 4dry_A 84 IVRAVVCDVGDP--DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQ 161 (281)
T ss_dssp CEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEcCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 358999999999 999999999999999999999999986455788899999999999999999999999999999886
Q ss_pred C-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 90 K-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 90 ~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ ++|+||++||..+... .++...|+++|+|+++|+++++.|++++||++|+|+||++.|++......... . ...
T Consensus 162 ~~~~g~IV~isS~~~~~~--~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~-~~~ 236 (281)
T 4dry_A 162 TPRGGRIINNGSISAQTP--RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL--Q-ANG 236 (281)
T ss_dssp SSCCEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE--C-TTS
T ss_pred CCCCcEEEEECCHHhCCC--CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh--h-hhh
Confidence 4 2589999999998733 68889999999999999999999999999999999999999998764322100 0 012
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCC-cccceEEEec
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSR-YMTGTTIYVD 205 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~d 205 (219)
..+.+++.+|+ |+|++++||++.... .+++.++.-.
T Consensus 237 ~~~~~~~~~pe-dvA~~v~fL~s~~~~~~i~~~~i~p~ 273 (281)
T 4dry_A 237 EVAAEPTIPIE-HIAEAVVYMASLPLSANVLTMTVMAT 273 (281)
T ss_dssp CEEECCCBCHH-HHHHHHHHHHHSCTTEEEEEEEEEET
T ss_pred cccccCCCCHH-HHHHHHHHHhCCCccCccccEEEEec
Confidence 34566777887 999999999996444 3444444433
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=213.89 Aligned_cols=192 Identities=14% Similarity=0.142 Sum_probs=152.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH-hCCCcEEEeccc--cC----CCCCCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI-LGNLDAFVHCYT--YE----GKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-~g~id~lv~~ag--~~----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
+.++.++++|++|+ ++++++++++.++ +|++|++||||| +. ....++.+.+.++|++++++|+.+++.+++
T Consensus 53 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 130 (260)
T 2qq5_A 53 GGQCVPVVCDSSQE--SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSV 130 (260)
T ss_dssp SSEEEEEECCTTSH--HHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHH
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHH
Confidence 45788999999999 9999999999887 899999999995 31 024577788899999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
.+.|.|++++ .|+||++||..+. .+ .+...|+++|+++++|+++++.|++++||++|+|+||++.|++........
T Consensus 131 ~~~~~~~~~~-~g~iv~isS~~~~-~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~ 206 (260)
T 2qq5_A 131 YGARLMVPAG-QGLIVVISSPGSL-QY--MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE 206 (260)
T ss_dssp HHHHHHGGGT-CCEEEEECCGGGT-SC--CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------
T ss_pred HHHHHHhhcC-CcEEEEEcChhhc-CC--CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc
Confidence 9999998765 6999999999886 32 456899999999999999999999999999999999999999875432211
Q ss_pred HH--HHHHH-hhcCCCCCCCCchhHHHHHHHhccCCC-CcccceEEEecC
Q 027744 161 RA--VKLVR-EAAPLHRWLDVKNDLASTVIYLISDGS-RYMTGTTIYVDG 206 (219)
Q Consensus 161 ~~--~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dg 206 (219)
.. ..... ...++++..+|+ |+|++++||+++.. .++||+++.+|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~pe-~va~~v~~l~s~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 207 EVLQDPVLKQFKSAFSSAETTE-LSGKCVVALATDPNILSLSGKVLPSCD 255 (260)
T ss_dssp ---------------CHHHHHH-HHHHHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred cccchhHHHHHHhhhccCCCHH-HHHHHHHHHhcCcccccccceeechhh
Confidence 11 01110 123445555676 99999999999876 489999998874
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=207.63 Aligned_cols=183 Identities=21% Similarity=0.230 Sum_probs=158.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|+ ++++++++++.+.+|++|++|||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 51 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 127 (235)
T 3l77_A 51 GVEVFYHHLDVSKA--ESVEEFSKKVLERFGDVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK 127 (235)
T ss_dssp CCCEEEEECCTTCH--HHHHHHCC-HHHHHSSCSEEEECCCCC-CCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCH--HHHHHHHHHHHHhcCCCCEEEECCccc-cccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56889999999999 999999999999999999999999986 678889999999999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+. ++++|+++|..+... .+....|+++|+++++|++++. +...|||+++|+||++.|++........
T Consensus 128 ~~--~~~ii~~sS~~~~~~--~~~~~~Y~~sKaa~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~------- 194 (235)
T 3l77_A 128 RT--GGLALVTTSDVSARL--IPYGGGYVSTKWAARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKP------- 194 (235)
T ss_dssp HH--TCEEEEECCGGGSSC--CTTCHHHHHHHHHHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCC-------
T ss_pred hc--CCcEEEEecchhccc--CCCcchHHHHHHHHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCcc-------
Confidence 54 588999999888633 5778999999999999999994 4467899999999999999876543311
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..++.+|+ |+|+++++|+++...+++|+.+..|+|+..
T Consensus 195 ---~~~~~~~p~-dva~~v~~l~~~~~~~~~~~~~~~~~~~~~ 233 (235)
T 3l77_A 195 ---KEKGYLKPD-EIAEAVRCLLKLPKDVRVEELMLRSVYQRP 233 (235)
T ss_dssp ---GGGTCBCHH-HHHHHHHHHHTSCTTCCCCEEEECCTTSCC
T ss_pred ---cccCCCCHH-HHHHHHHHHHcCCCCCccceEEEeecccCC
Confidence 112556777 999999999999999999999999999853
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=235.85 Aligned_cols=177 Identities=20% Similarity=0.189 Sum_probs=153.8
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. ++++++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.+++.++|+++|+|++++ .|+
T Consensus 69 ~~d~~d~--~~~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~ 144 (604)
T 2et6_A 69 VADYNNV--LDGDKIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGR 144 (604)
T ss_dssp EEECCCT--TCHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred EEEcCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCE
Confidence 4799998 889999999999999999999999986 567889999999999999999999999999999998876 799
Q ss_pred EEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCC
Q 027744 95 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 174 (219)
Q Consensus 95 iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 174 (219)
||++||.++... .++...|+++|+|+.+|+++++.|++++|||||+|+|| +.|++.......+ .. +
T Consensus 145 IVnisS~ag~~~--~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~~~----~~-------~ 210 (604)
T 2et6_A 145 IVNTSSPAGLYG--NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMPPP----ML-------E 210 (604)
T ss_dssp EEEECCHHHHHC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSCHH----HH-------T
T ss_pred EEEECCHHHcCC--CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCChh----hh-------c
Confidence 999999998743 57889999999999999999999999999999999998 5787654322211 00 1
Q ss_pred CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 175 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+|+ |+|..++||+++. .++||+++.+|||+...
T Consensus 211 ~~~pe-~vA~~v~~L~s~~-~~itG~~~~vdgG~~~~ 245 (604)
T 2et6_A 211 KLGPE-KVAPLVLYLSSAE-NELTGQFFEVAAGFYAQ 245 (604)
T ss_dssp TCSHH-HHHHHHHHHTSSS-CCCCSCEEEEETTEEEE
T ss_pred cCCHH-HHHHHHHHHhCCc-ccCCCCEEEECCCeEEE
Confidence 24566 9999999999988 89999999999997544
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-31 Score=204.87 Aligned_cols=185 Identities=17% Similarity=0.247 Sum_probs=164.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|+
T Consensus 57 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (244)
T 2bd0_A 57 GALTDTITADISDM--ADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME 133 (244)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeeeEEEecCCCH--HHHHHHHHHHHHhCCCCCEEEEcCCcC-CcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ .++||++||..+... .++...|+++|++++.++++++.+++++||++++++||++.|++........
T Consensus 134 ~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------- 203 (244)
T 2bd0_A 134 RQH-SGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM------- 203 (244)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------
T ss_pred hCC-CCEEEEEecchhcCC--CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-------
Confidence 765 699999999988733 5788999999999999999999999999999999999999999876532210
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..++.+|+ |+|+++++++++...+++|+++..|+|+.+
T Consensus 204 ----~~~~~~~~-dva~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 204 ----QALMMMPE-DIAAPVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp ----GGGSBCHH-HHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred ----cccCCCHH-HHHHHHHHHHhCCccccchheEEecccccc
Confidence 12456776 999999999999999999999999999876
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=206.68 Aligned_cols=191 Identities=26% Similarity=0.419 Sum_probs=161.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. ++++++++ .++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|+++
T Consensus 53 ~~~~~~~D~~~~--~~~~~~~~----~~~~id~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 125 (244)
T 1cyd_A 53 GIEPVCVDLGDW--DATEKALG----GIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 125 (244)
T ss_dssp TCEEEECCTTCH--HHHHHHHT----TCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEecCCCH--HHHHHHHH----HcCCCCEEEECCccc-CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 356779999998 88887776 568899999999985 55677888999999999999999999999999999876
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+..++||++||..++.. .++...|+++|++++.+++.++++++++||++++++||.+.|++.......+.........
T Consensus 126 ~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~ 203 (244)
T 1cyd_A 126 GVPGSIVNVSSMVAHVT--FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER 203 (244)
T ss_dssp TCCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH
T ss_pred CCCeEEEEEcchhhcCC--CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhc
Confidence 42589999999988633 5778899999999999999999999999999999999999998765332223332333355
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.|++++..++ |+|+++++++++...+++|+.+.+|||+..
T Consensus 204 ~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 204 HPLRKFAEVE-DVVNSILFLLSDRSASTSGGGILVDAGYLA 243 (244)
T ss_dssp STTSSCBCHH-HHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred CCccCCCCHH-HHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence 6788888888 999999999998888999999999999864
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-32 Score=220.14 Aligned_cols=193 Identities=13% Similarity=0.045 Sum_probs=160.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC------------CCCCC-------------------
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG------------KMQDP------------------- 56 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~------------~~~~~------------------- 56 (219)
+.++..+.+|++|+ ++++++++++.+++|++|+||||||... ...++
T Consensus 108 G~~a~~i~~Dvtd~--~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~ 185 (405)
T 3zu3_A 108 GLYAKSINGDAFSD--EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKES 185 (405)
T ss_dssp TCCEEEEESCTTSH--HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEE
T ss_pred CCceEEEECCCCCH--HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccc
Confidence 56788999999999 9999999999999999999999999731 23444
Q ss_pred --CCcCHHHHHHHHHhhhchHH-HHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHHHHHH
Q 027744 57 --LQVGEDEFKKLVKINFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAM 131 (219)
Q Consensus 57 --~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~l~~ 131 (219)
.+.+.++|++++++|..+.+ .+++++.+.+...+ +|+||++||..+... .+.+ +.|+++|+++++|+|+++.
T Consensus 186 ~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~--~p~~~~~aY~AaKaal~~ltrsLA~ 262 (405)
T 3zu3_A 186 VLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKIT--HDIYWNGSIGAAKKDLDQKVLAIRE 262 (405)
T ss_dssp EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGG--TTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCc--CCCccchHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999998 78888776433333 589999999998733 5666 9999999999999999999
Q ss_pred HhCCC-CeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 132 EIGKH-KIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 132 e~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|++++ |||+|+|+||.+.|++.......+..... ...++++.++++ |+++.+.||+|+ ++.|+.+.+|++..+
T Consensus 263 Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~--l~~~mkr~G~~E-d~a~~i~~L~sd---~l~~~~~~~D~~~~~ 336 (405)
T 3zu3_A 263 SLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSL--LFKVMKEKGTHE-GCIEQVYSLYKD---SLCGDSPHMDQEGRL 336 (405)
T ss_dssp HHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHH--HHHHHHHHTCCC-CHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred HhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHH--HHHHHhcCCCcH-HHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence 99999 99999999999999987655433322222 223688889998 999999999986 688999999998776
Q ss_pred c
Q 027744 211 T 211 (219)
Q Consensus 211 ~ 211 (219)
.
T Consensus 337 r 337 (405)
T 3zu3_A 337 R 337 (405)
T ss_dssp E
T ss_pred C
Confidence 5
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=209.17 Aligned_cols=193 Identities=24% Similarity=0.327 Sum_probs=166.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.++++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 70 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 146 (274)
T 1ja9_A 70 GAQGVAIQADISKP--SEVVALFDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR 146 (274)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45788999999999 999999999999999999999999986 566777899999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc-----------c
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI-----------A 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~-----------~ 156 (219)
+ +++||++||..+.. .+.++...|+++|++++.+++.++++++.+||+++.++||.+.|++... .
T Consensus 147 -~--~~~iv~~sS~~~~~-~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 222 (274)
T 1ja9_A 147 -R--GGRIILTSSIAAVM-TGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 222 (274)
T ss_dssp -E--EEEEEEECCGGGTC-CSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTT
T ss_pred -h--CCEEEEEcChHhcc-CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhccccccccccccc
Confidence 3 48999999998862 2257788999999999999999999999999999999999999987652 1
Q ss_pred cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 157 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+..........+.+++..++ |+|+++++++++...+++|+++++|||+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 223 MPQEKIDEGLANMNPLKRIGYPA-DIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp CCHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CchHHHHHHHHhcCCCCCccCHH-HHHHHHHHHhCcccccccCcEEEecCCc
Confidence 11122223333566788888888 9999999999987788999999999996
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-31 Score=202.83 Aligned_cols=192 Identities=23% Similarity=0.294 Sum_probs=160.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCc----CHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQV----GEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.++.++++|++|+ ++++++++++ +.++++|++|||||.. ...++.+. +.++|++.+++|+.+++.+++.+.+
T Consensus 39 ~~~~~~~~D~~~~--~~~~~~~~~~-~~~~~~d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 114 (242)
T 1uay_A 39 EDLIYVEGDVTRE--EDVRRAVARA-QEEAPLFAVVSAAGVG-LAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW 114 (242)
T ss_dssp SSSEEEECCTTCH--HHHHHHHHHH-HHHSCEEEEEECCCCC-CCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cceEEEeCCCCCH--HHHHHHHHHH-HhhCCceEEEEccccc-CcccccccccccchHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4568899999999 9999999999 8889999999999985 44444444 4459999999999999999999999
Q ss_pred HHHhcC-----CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 85 RMKESK-----AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 85 ~l~~~~-----~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
.|++++ ..++||++||..+... .++...|+++|++++.+++.++.|++++||++++|+||++.|++..... .
T Consensus 115 ~~~~~~~~~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~ 191 (242)
T 1uay_A 115 AMRENPPDAEGQRGVIVNTASVAAFEG--QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-E 191 (242)
T ss_dssp HHTTCCCCTTSCSEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-H
T ss_pred HHHhcCCCCCCCCeEEEEeCChhhccC--CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc-h
Confidence 998753 1249999999988733 5788999999999999999999999999999999999999999765432 2
Q ss_pred HHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..........|+ +++.+|+ |+|+++++++++ .+++|+++.+|||+++.
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~-dva~~~~~l~~~--~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 192 -KAKASLAAQVPFPPRLGRPE-EYAALVLHILEN--PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp -HHHHHHHTTCCSSCSCCCHH-HHHHHHHHHHHC--TTCCSCEEEESTTCCCC
T ss_pred -hHHHHHHhhCCCcccCCCHH-HHHHHHHHHhcC--CCCCCcEEEEcCCeecC
Confidence 222233355677 7888887 999999999986 78999999999999764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5e-32 Score=208.59 Aligned_cols=182 Identities=15% Similarity=0.125 Sum_probs=155.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHh--CCCcEEEeccccCCCCCCC-CCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQIL--GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~--g~id~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++++|++|+ ++++++++++.+.+ +++|++|||||.. ...++ .+.+.++|++.+++|+.+++.+++.++|.|
T Consensus 47 ~~~~~~~D~~~~--~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 123 (241)
T 1dhr_A 47 ASVIVKMTDSFT--EQADQVTAEVGKLLGDQKVDAILCVAGGW-AGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 123 (241)
T ss_dssp EEEECCCCSCHH--HHHHHHHHHHHHHHTTCCEEEEEECCCCC-CCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CcEEEEcCCCCH--HHHHHHHHHHHHHhCCCCCCEEEEccccc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 457789999999 99999999999999 7999999999986 45566 678899999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++ +|+||++||..+... .++...|+++|++++.|+++++.|++ ++||++|+|+||+++|++.......
T Consensus 124 ~~---~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----- 193 (241)
T 1dhr_A 124 KE---GGLLTLAGAKAALDG--TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----- 193 (241)
T ss_dssp EE---EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-----
T ss_pred cc---CCEEEEECCHHHccC--CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc-----
Confidence 64 489999999998733 57889999999999999999999999 8999999999999999875432111
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....+...+ +|+|+.+++++++...+++|+++.+|||...
T Consensus 194 -----~~~~~~~~~-~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~~ 233 (241)
T 1dhr_A 194 -----ADFSSWTPL-EFLVETFHDWITGNKRPNSGSLIQVVTTDGK 233 (241)
T ss_dssp -----SCGGGSEEH-HHHHHHHHHHHTTTTCCCTTCEEEEEEETTE
T ss_pred -----hhhccCCCH-HHHHHHHHHHhcCCCcCccceEEEEeCCCCc
Confidence 111222344 4999999999999999999999999998753
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=208.22 Aligned_cols=178 Identities=19% Similarity=0.202 Sum_probs=153.0
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
..+|+++. ++++++++++.+.++++|+||||||+. ...++.+.+.++|+.++++|+.+++++++.++|+|++++ .|
T Consensus 69 ~~~D~~~~--~~~~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g 144 (319)
T 1gz6_A 69 AVANYDSV--EAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YG 144 (319)
T ss_dssp EEEECCCG--GGHHHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CE
T ss_pred EEEeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CC
Confidence 35899999 999999999999999999999999986 556778889999999999999999999999999998876 69
Q ss_pred eEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCC
Q 027744 94 SIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH 173 (219)
Q Consensus 94 ~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 173 (219)
+||++||..+... .+++..|+++|++++.|++.++++++++||++|+|+||++ |++.....+.. . .
T Consensus 145 rIV~vsS~~~~~~--~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~~~-~---~------- 210 (319)
T 1gz6_A 145 RIIMTASASGIYG--NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMPED-L---V------- 210 (319)
T ss_dssp EEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSCHH-H---H-------
T ss_pred EEEEECChhhccC--CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCChh-h---h-------
Confidence 9999999887633 4778999999999999999999999999999999999998 87765432221 1 1
Q ss_pred CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 174 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+|+ |+|++++||+++ ..+++|+++.+|||+...
T Consensus 211 ~~~~p~-dvA~~~~~l~s~-~~~~tG~~~~v~GG~~~~ 246 (319)
T 1gz6_A 211 EALKPE-YVAPLVLWLCHE-SCEENGGLFEVGAGWIGK 246 (319)
T ss_dssp HHSCGG-GTHHHHHHHTST-TCCCCSCEEEEETTEEEE
T ss_pred ccCCHH-HHHHHHHHHhCc-hhhcCCCEEEECCCeEEE
Confidence 124666 999999999987 457899999999997653
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=217.56 Aligned_cols=195 Identities=12% Similarity=0.077 Sum_probs=158.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccC------------CCCCCC------------------
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYE------------GKMQDP------------------ 56 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~------------~~~~~~------------------ 56 (219)
+.++..+.+|++|+ ++++++++++.+++ |++|+||||||.. ....++
T Consensus 122 G~~a~~i~~Dvtd~--~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~ 199 (422)
T 3s8m_A 122 GLYSKSINGDAFSD--AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQ 199 (422)
T ss_dssp TCCEEEEESCTTSH--HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEE
T ss_pred CCcEEEEEecCCCH--HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccc
Confidence 56789999999999 99999999999999 9999999999872 122344
Q ss_pred ---CCcCHHHHHHHHHhhhchHH-HHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHHHHH
Q 027744 57 ---LQVGEDEFKKLVKINFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAA 130 (219)
Q Consensus 57 ---~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~l~ 130 (219)
.+++.++|++.+++|..+.+ .+++.+.+.+...+ +|+||++||..+... .+.+ +.|+++|+|+.+|+|+++
T Consensus 200 ~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~--~p~~~~~aY~ASKaAl~~lTrsLA 276 (422)
T 3s8m_A 200 ASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD-GARSVAFSYIGTEIT--WPIYWHGALGKAKVDLDRTAQRLN 276 (422)
T ss_dssp EEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGG--HHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhcc--CCCccchHHHHHHHHHHHHHHHHH
Confidence 36799999999999999987 78888776533333 589999999998733 4555 899999999999999999
Q ss_pred HHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCccc-ceEEEecCCcc
Q 027744 131 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT-GTTIYVDGAQS 209 (219)
Q Consensus 131 ~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~i~~dgG~~ 209 (219)
.|++++|||||+|+||++.|++.......+.... ....++++.++|+ |+++.+.||+|+.- +.+ |+...+|++..
T Consensus 277 ~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~--~~~~~m~r~G~pE-dva~~v~~L~sd~l-y~~~~~~~~~d~~~~ 352 (422)
T 3s8m_A 277 ARLAKHGGGANVAVLKSVVTQASAAIPVMPLYIS--MVYKIMKEKGLHE-GTIEQLDRLFRERL-YRQDGQPAEVDEQNR 352 (422)
T ss_dssp HHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHH--HHHHHHHHTTCCC-CHHHHHHHHHHHTT-TCTTCCCCCCCTTSC
T ss_pred HHhCccCEEEEEEEcCCCcChhhhcCCCChHHHH--HHHhhhcCCcChH-HHHHHHHHHhcchh-hccCCCCcccCCCCC
Confidence 9999999999999999999999876533332211 1234788999998 99999999999743 554 77776998887
Q ss_pred cc
Q 027744 210 IT 211 (219)
Q Consensus 210 ~~ 211 (219)
+.
T Consensus 353 ~r 354 (422)
T 3s8m_A 353 LR 354 (422)
T ss_dssp EE
T ss_pred Cc
Confidence 74
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=208.10 Aligned_cols=181 Identities=15% Similarity=0.190 Sum_probs=158.1
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
..+.+|++|. ++++++++++.++++++|++|||||+......+.+.+.++|++.+++|+.+++.+++++++.|++
T Consensus 62 ~~~~~d~~d~--~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--- 136 (251)
T 3orf_A 62 HSFTIKDSGE--EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--- 136 (251)
T ss_dssp EEEECSCSSH--HHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---
T ss_pred cceEEEeCCH--HHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---
Confidence 4678999999 99999999999999999999999998644444777889999999999999999999999999865
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+|+||++||..+... .++...|+++|+|++.+++++++|++ +.||++++|+||++.|++..... ..
T Consensus 137 ~g~iv~isS~~~~~~--~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~----------~~ 204 (251)
T 3orf_A 137 GGLFVLTGASAALNR--TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM----------SD 204 (251)
T ss_dssp EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC----------TT
T ss_pred CCEEEEEechhhccC--CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc----------cc
Confidence 489999999998743 68899999999999999999999987 88999999999999997654321 23
Q ss_pred cCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~ 210 (219)
.+.+++.+|+ |+|+++++|+++ ...+++|+++.+++|...
T Consensus 205 ~~~~~~~~~~-dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 205 ANFDDWTPLS-EVAEKLFEWSTNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp SCGGGSBCHH-HHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred ccccccCCHH-HHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence 4566677777 999999999998 889999999999988754
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=204.51 Aligned_cols=183 Identities=12% Similarity=0.086 Sum_probs=154.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHh--CCCcEEEeccccCCCCCCC-CCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQIL--GNLDAFVHCYTYEGKMQDP-LQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~--g~id~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++.+|++|. ++++++++++.+.+ +++|++|||||.. ...++ .+.+.++|++.+++|+.+++.+++.++|.|
T Consensus 43 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 119 (236)
T 1ooe_A 43 SNILVDGNKNWT--EQEQSILEQTASSLQGSQVDGVFCVAGGW-AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 119 (236)
T ss_dssp EEEECCTTSCHH--HHHHHHHHHHHHHHTTCCEEEEEECCCCC-CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred ccEEEeCCCCCH--HHHHHHHHHHHHHhCCCCCCEEEECCccc-CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 457789999999 99999999999999 7999999999986 45566 678889999999999999999999999998
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++ +|+||++||..+... .++...|+++|+++++|+++++.|++ ++||++++|+||+++|++.......
T Consensus 120 ~~---~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----- 189 (236)
T 1ooe_A 120 KP---GGLLQLTGAAAAMGP--TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----- 189 (236)
T ss_dssp EE---EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT-----
T ss_pred cc---CCEEEEECchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC-----
Confidence 64 489999999998733 58889999999999999999999998 8999999999999999875432111
Q ss_pred HHHhhcCCCCCCCCchhHHHHHH-HhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVI-YLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....+...|+ |+|+.++ +|+++...+++|+.+.+|||....
T Consensus 190 -----~~~~~~~~~~-dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~~~ 231 (236)
T 1ooe_A 190 -----ADHSSWTPLS-FISEHLLKWTTETSSRPSSGALLKITTENGTS 231 (236)
T ss_dssp -----CCGGGCBCHH-HHHHHHHHHHHCGGGCCCTTCEEEEEEETTEE
T ss_pred -----ccccccCCHH-HHHHHHHHHHcCCCcccccccEEEEecCCCcc
Confidence 1122334455 9999998 555888899999999999997543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=224.03 Aligned_cols=179 Identities=17% Similarity=0.132 Sum_probs=143.3
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. ++++++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|+|++++ .|+
T Consensus 80 ~~D~~d~--~~~~~~~~~~~~~~g~iDiLVnnAGi~-~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~ 155 (613)
T 3oml_A 80 VADYNSV--IDGAKVIETAIKAFGRVDILVNNAGIL-RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGR 155 (613)
T ss_dssp EECCCCG--GGHHHHHC----------CEECCCCCC-CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEE
T ss_pred EEEeCCH--HHHHHHHHHHHHHCCCCcEEEECCCCC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCE
Confidence 4899999 999999999999999999999999996 667888999999999999999999999999999999876 799
Q ss_pred EEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCC
Q 027744 95 IVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHR 174 (219)
Q Consensus 95 iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 174 (219)
||++||.++... .++...|+++|+|+.+|+++++.|++++||++|+|+||.+ |++.....+... .+
T Consensus 156 IV~isS~a~~~~--~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~-----------~~ 221 (613)
T 3oml_A 156 IIMTSSNSGIYG--NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPDIL-----------FN 221 (613)
T ss_dssp EEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCHHH-----------HT
T ss_pred EEEECCHHHcCC--CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccchhh-----------hh
Confidence 999999998743 5788999999999999999999999999999999999974 666554433221 12
Q ss_pred CCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 175 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
...|+ |+|++++||+++. .++||+++.+|||+.....
T Consensus 222 ~~~pe-dvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~~~ 258 (613)
T 3oml_A 222 ELKPK-LIAPVVAYLCHES-CEDNGSYIESAAGWATKLH 258 (613)
T ss_dssp TCCGG-GTHHHHHHTTSTT-CCCCSCEEEEETTEEEEEC
T ss_pred cCCHH-HHHHHHHHhcCCC-cCCCceEEEECCCeEEEEE
Confidence 24666 9999999999988 8999999999999876543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=199.30 Aligned_cols=180 Identities=12% Similarity=0.195 Sum_probs=144.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|+++. ++++++++++.+ ..|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 46 ~~~~~~~~~D~~~~--~~v~~~~~~~~~---~~d~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 119 (230)
T 3guy_A 46 SNNVGYRARDLASH--QEVEQLFEQLDS---IPSTVVHSAGSG-YFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYK 119 (230)
T ss_dssp SSCCCEEECCTTCH--HHHHHHHHSCSS---CCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCeEeecCCCH--HHHHHHHHHHhh---cCCEEEEeCCcC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788999999999 999988887643 349999999985 678888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ ++||++||..+... .++...|+++|+|+++|+++++.|++++||++++|+||++.|++.....
T Consensus 120 ~~~--~~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------- 185 (230)
T 3guy_A 120 DQP--VNVVMIMSTAAQQP--KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG---------- 185 (230)
T ss_dssp TSC--CEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------
T ss_pred hCC--CeEEEEeecccCCC--CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC----------
Confidence 764 59999999998733 6888999999999999999999999999999999999999999876432
Q ss_pred hhcCCCCCCCCchhHHHHHHHhcc-CCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgG~ 208 (219)
...+.+++.+|+ |+|++++++++ +...++||+.+..+...
T Consensus 186 ~~~~~~~~~~~~-dvA~~i~~l~~~~~~~~itg~~~~~~~~~ 226 (230)
T 3guy_A 186 KSLDTSSFMSAE-DAALMIHGALANIGNGYVSDITVNREGHH 226 (230)
T ss_dssp -------CCCHH-HHHHHHHHHCCEETTEEEEEEEEEC----
T ss_pred CCCCcccCCCHH-HHHHHHHHHHhCcCCCCccceeecCCCCC
Confidence 223456777887 99999999887 68889999999988654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=202.41 Aligned_cols=188 Identities=20% Similarity=0.258 Sum_probs=152.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. +.++|++.+++|+.+++.+++.+++.|+
T Consensus 57 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 125 (267)
T 2gdz_A 57 PQKTLFIQCDVADQ--QQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMS 125 (267)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC---------CSSSHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred CCceEEEecCCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC---------ChhhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999974 1356899999999999999999999997
Q ss_pred hcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHH--HHHhCCCCeEEEEeecCCccCCCCccccchHHH-
Q 027744 88 ESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTA--AMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA- 162 (219)
Q Consensus 88 ~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l--~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~- 162 (219)
+++ ..|+||++||..+... .++...|+++|++++.+++++ +.|+++.|||+|+|+||++.|++.......+..
T Consensus 126 ~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~ 203 (267)
T 2gdz_A 126 KQNGGEGGIIINMSSLAGLMP--VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMG 203 (267)
T ss_dssp GGGTCCCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHG
T ss_pred hccCCCCCEEEEeCCccccCC--CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccc
Confidence 653 1589999999998733 577889999999999999995 689999999999999999999875432221111
Q ss_pred -----HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 -----VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 -----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........+..++.+|+ |+|+++++|+++. .++|+++.+|||....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~-dvA~~v~~l~s~~--~~~G~~~~v~gg~~~~ 254 (267)
T 2gdz_A 204 QYIEYKDHIKDMIKYYGILDPP-LIANGLITLIEDD--ALNGAIMKITTSKGIH 254 (267)
T ss_dssp GGGGGHHHHHHHHHHHCCBCHH-HHHHHHHHHHHCT--TCSSCEEEEETTTEEE
T ss_pred hhhhHHHHHHHHhccccCCCHH-HHHHHHHHHhcCc--CCCCcEEEecCCCccc
Confidence 00111112223345777 9999999999864 4899999999998654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=205.94 Aligned_cols=183 Identities=21% Similarity=0.328 Sum_probs=137.8
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+++|++|. ++++++++++ .+++|++|||||..... +.|++++++|+.+++.+++.++|.|++++ .|
T Consensus 42 ~~~Dl~~~--~~v~~~~~~~---~~~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g 107 (257)
T 1fjh_A 42 LSTAEGRK--QAIADVLAKC---SKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGH-QP 107 (257)
T ss_dssp TTSHHHHH--HHHHHHHTTC---TTCCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SC
T ss_pred cccCCCCH--HHHHHHHHHh---CCCCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-Cc
Confidence 56888888 7877777633 38899999999985212 22899999999999999999999998765 69
Q ss_pred eEEEeeccccccc--------------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 94 SIVFLTSIIGAER--------------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 94 ~iv~iss~~~~~~--------------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
+||++||..+... .+.++...|+++|++++.+++.++++++++||++++|+||+
T Consensus 108 ~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~ 187 (257)
T 1fjh_A 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGA 187 (257)
T ss_dssp EEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC
T ss_pred EEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCC
Confidence 9999999988620 11346789999999999999999999999999999999999
Q ss_pred ccCCCCccccchHHHHHHHHh-hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 148 HLQDEYPIAVGQERAVKLVRE-AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 148 v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+.|++................ ..|++++.+|+ |+|+++++|+++...+++|+++.+|||+.+.
T Consensus 188 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 188 TETPLLQAGLQDPRYGESIAKFVPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp ---------------------CCCSTTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred CCCccchhhccchhHHHHHHhcccccCCCCCHH-HHHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 999987653222111112211 45777888888 9999999999988889999999999998653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=195.92 Aligned_cols=181 Identities=15% Similarity=0.140 Sum_probs=150.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.++.++.+|++|. ++++++++++.+.+| ++|++|||||...+..++.+.+.++|++.+++|+.+++.+++.+++.
T Consensus 50 ~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 127 (250)
T 1yo6_A 50 DSRVHVLPLTVTCD--KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPL 127 (250)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred CCceEEEEeecCCH--HHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 55789999999999 999999999999998 99999999998633678888999999999999999999999999999
Q ss_pred HHhc------CC----CCeEEEeecccccccCCC-----CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccC
Q 027744 86 MKES------KA----GGSIVFLTSIIGAERGLY-----PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 150 (219)
Q Consensus 86 l~~~------~~----~g~iv~iss~~~~~~~~~-----~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t 150 (219)
|+++ +. .++||++||..+....+. ++...|+++|++++.++++++++++++||++++|+||++.|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 207 (250)
T 1yo6_A 128 LKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp HHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred HhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceec
Confidence 9865 21 489999999988633211 57789999999999999999999999999999999999999
Q ss_pred CCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 151 DEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
++.... ...+|+ |+|+.+++++++...+++|+++.+|||.
T Consensus 208 ~~~~~~-----------------~~~~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 208 NLGGKN-----------------AALTVE-QSTAELISSFNKLDNSHNGRFFMRNLKP 247 (250)
T ss_dssp ----------------------------H-HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred CCCCCC-----------------CCCCHH-HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence 986431 224566 9999999999988888999999999985
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=199.62 Aligned_cols=191 Identities=19% Similarity=0.251 Sum_probs=156.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|. ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 50 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 126 (281)
T 3m1a_A 50 PDRAEAISLDVTDG--ERIDVVAADVLARYGRVDVLVNNAGRT-QVGAFEETTERELRDLFELHVFGPARLTRALLPQMR 126 (281)
T ss_dssp TTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCE-EECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred cCCceEEEeeCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-------ch-
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-------GQ- 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-------~~- 159 (219)
+++ .|+||++||..+... .++...|+++|++++.++++++.|++++||++++|+||++.|++..... ..
T Consensus 127 ~~~-~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~ 203 (281)
T 3m1a_A 127 ERG-SGSVVNISSFGGQLS--FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAY 203 (281)
T ss_dssp HHT-CEEEEEECCGGGTCC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTT
T ss_pred hcC-CCEEEEEcCccccCC--CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhh
Confidence 876 799999999998733 6888999999999999999999999999999999999999999864321 10
Q ss_pred -HH--HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 160 -ER--AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 160 -~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.. .........+.+++.+++ |+|++++++++... .|..+++.++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-dva~a~~~~~~~~~---~~~~~~l~s~~ 251 (281)
T 3m1a_A 204 AEKVGPTRQLVQGSDGSQPGDPA-KAAAAIRLALDTEK---TPLRLALGGDA 251 (281)
T ss_dssp HHHHHHHHHHHHC-----CBCHH-HHHHHHHHHHHSSS---CCSEEEESHHH
T ss_pred HHHhHHHHHHHhhccCCCCCCHH-HHHHHHHHHHhCCC---CCeEEecCchH
Confidence 01 111122345667778887 99999999997643 46677776553
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=193.63 Aligned_cols=180 Identities=18% Similarity=0.243 Sum_probs=146.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+++
T Consensus 51 ~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 127 (234)
T 2ehd_A 51 GALPLPGDVREE--GDWARAVAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR 127 (234)
T ss_dssp TCEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred hceEEEecCCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 678899999999 999999999999999999999999985 56777889999999999999999999999999999886
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ .++||++||..+... .++...|+++|++++.++++++.+++++||+++.|+||++.|++..... + . . .
T Consensus 128 ~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~---~-~-~- 196 (234)
T 2ehd_A 128 G-GGTIVNVGSLAGKNP--FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--G---Q-A-W- 196 (234)
T ss_dssp T-CEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------
T ss_pred C-CcEEEEECCchhcCC--CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--c---c-c-C-
Confidence 5 689999999988633 5788999999999999999999999999999999999999998765321 0 0 1 0
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
..+|+ |+|+++++++++...+++|+++..+++..
T Consensus 197 -----~~~~~-dvA~~~~~l~~~~~~~~~g~~~~~~~~~~ 230 (234)
T 2ehd_A 197 -----KLKPE-DVAQAVLFALEMPGHAMVSEIELRPTRPT 230 (234)
T ss_dssp ------CCHH-HHHHHHHHHHHSCCSSCCCEEECCC----
T ss_pred -----CCCHH-HHHHHHHHHhCCCcccccceEEEeecCCC
Confidence 24666 99999999999988999999776665543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-29 Score=196.60 Aligned_cols=193 Identities=16% Similarity=0.153 Sum_probs=156.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. ++++++++++.+.++++|+||||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|++
T Consensus 83 ~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~vi~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~ 159 (279)
T 1xg5_A 83 GTLIPYRCDLSNE--EDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 159 (279)
T ss_dssp SEEEEEECCTTCH--HHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCH--HHHHHHHHHHHHhCCCCCEEEECCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 4688999999999 999999999999999999999999985 5677888899999999999999999999999999987
Q ss_pred cCC-CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 89 SKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 89 ~~~-~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
++. +++||++||..+....+.++...|+++|++++.|++.++.|++ +.||++++|+||++.|++......... ...
T Consensus 160 ~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~ 238 (279)
T 1xg5_A 160 RNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP-EKA 238 (279)
T ss_dssp TTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH-HHH
T ss_pred cCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh-hHH
Confidence 652 3899999999886222356778999999999999999999998 889999999999999998533221111 111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
. ...+..++.+|+ |+|+++++++++.....+|+....++|
T Consensus 239 ~-~~~~~~~~~~~~-dvA~~i~~l~~~~~~~~~g~i~i~~~~ 278 (279)
T 1xg5_A 239 A-ATYEQMKCLKPE-DVAEAVIYVLSTPAHIQIGDIQMRPTG 278 (279)
T ss_dssp H-HHHC---CBCHH-HHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred h-hhcccccCCCHH-HHHHHHHHHhcCCcceEeeeEEEccCC
Confidence 1 223445667777 999999999998777777775555554
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=201.29 Aligned_cols=179 Identities=18% Similarity=0.178 Sum_probs=146.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++|. ++++++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus 79 ~~~~~~~~~Dv~d~--~~v~~~~~~~~~~~g~id~lvnnAg~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (301)
T 3tjr_A 79 GFDAHGVVCDVRHL--DEMVRLADEAFRLLGGVDVVFSNAGIV-VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLL 155 (301)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSSCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 667888999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH-----
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA----- 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----- 162 (219)
+++.+|+||++||..+... .++...|+++|+|+++|+++++.|+++.||++++|+||+++|++..........
T Consensus 156 ~~~~~g~iv~isS~~~~~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 233 (301)
T 3tjr_A 156 EQGTGGHIAFTASFAGLVP--NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMS 233 (301)
T ss_dssp HHCSCEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------
T ss_pred hcCCCcEEEEeCchhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccc
Confidence 8654689999999999743 688999999999999999999999999999999999999999986542111000
Q ss_pred ---HHHHHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 163 ---VKLVREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 163 ---~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
...+........+.+|+ |+|+.++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~pe-dvA~~i~~~l~~ 265 (301)
T 3tjr_A 234 ATPEGAFGPLPTQDESVSAD-DVARLTADAILA 265 (301)
T ss_dssp ---------------CCCHH-HHHHHHHHHHHH
T ss_pred cChhhhccccccccCCCCHH-HHHHHHHHHHhc
Confidence 00000111122345666 999999998854
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-30 Score=199.76 Aligned_cols=188 Identities=14% Similarity=0.126 Sum_probs=151.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|.. ++++++++++.+.++++|++|||||.. +.++|++.+++|+.+++.++++++|.|.
T Consensus 54 ~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 123 (254)
T 1sby_A 54 KVNITFHTYDVTVPV-AESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWD 123 (254)
T ss_dssp TSEEEEEECCTTSCH-HHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHC
T ss_pred CceEEEEEEecCCCh-HHHHHHHHHHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHH
Confidence 457899999999841 589999999999999999999999974 3467999999999999999999999997
Q ss_pred hcCC--CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHH
Q 027744 88 ESKA--GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QER 161 (219)
Q Consensus 88 ~~~~--~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~ 161 (219)
+++. .|+||++||..+... .++...|+++|++++.++++++.+++++||++++|+||++.|++...... .+.
T Consensus 124 ~~~~~~~g~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~ 201 (254)
T 1sby_A 124 KRKGGPGGIIANICSVTGFNA--IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR 201 (254)
T ss_dssp GGGTCCCEEEEEECCGGGTSC--CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT
T ss_pred HhcCCCCCEEEEECchhhccC--CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHH
Confidence 6531 489999999998733 57889999999999999999999998889999999999999997543211 111
Q ss_pred HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 162 AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
..... ...|+ .+|+ |+|+.++++++ .+++|+++.+|||+....+|.
T Consensus 202 ~~~~~-~~~~~---~~~~-dvA~~i~~~~~---~~~~G~~~~v~gG~~~~~~~~ 247 (254)
T 1sby_A 202 VAELL-LSHPT---QTSE-QCGQNFVKAIE---ANKNGAIWKLDLGTLEAIEWT 247 (254)
T ss_dssp HHHHH-TTSCC---EEHH-HHHHHHHHHHH---HCCTTCEEEEETTEEEECCCC
T ss_pred HHHHH-hcCCC---CCHH-HHHHHHHHHHH---cCCCCCEEEEeCCceeEeccc
Confidence 11111 22232 3555 99999999995 468999999999976555554
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=205.21 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=142.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|. ++++++++++ +++|++|||||+.. +..+.+.++|++++++|+.++++++++++|.|.
T Consensus 61 ~~~~~~~~~Dl~d~--~~v~~~~~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 131 (291)
T 3rd5_A 61 AGQVEVRELDLQDL--SSVRRFADGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLT 131 (291)
T ss_dssp SSEEEEEECCTTCH--HHHHHHHHTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE
T ss_pred cCCeeEEEcCCCCH--HHHHHHHHhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999 8988888766 78999999999863 335678889999999999999999999999885
Q ss_pred hcCCCCeEEEeecccccccC-----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCC--eEEEEeecCCccCCCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERG-----------LYPGAAAYGACAASIHQLVRTAAMEIGKHK--IRVNGIARGLHLQDEYP 154 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~g--i~v~~i~pG~v~t~~~~ 154 (219)
++||++||..+.... +.++...|+++|+|++.|++.++++++++| |++++|+||+|.|++..
T Consensus 132 -----~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~ 206 (291)
T 3rd5_A 132 -----DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQG 206 (291)
T ss_dssp -----EEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--
T ss_pred -----hheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccc
Confidence 379999999886321 134567899999999999999999999887 99999999999999987
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..... ..... ...+.++...+++|+|+++++|+++ ++++|+.+.+|||+.-
T Consensus 207 ~~~~~--~~~~~-~~~~~~~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~ 257 (291)
T 3rd5_A 207 ASGRK--LGDAL-MSAATRVVATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLG 257 (291)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred ccchH--HHHHH-HHHHHHHHhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccC
Confidence 64221 11111 2345566666344999999999987 4899999999999864
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=191.46 Aligned_cols=181 Identities=19% Similarity=0.246 Sum_probs=157.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.++.++.+|++|. ++++++++++.+.++ ++|++|||||......++.+.+.++|++.+++|+.+++.+++.+++.
T Consensus 71 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 148 (267)
T 1sny_A 71 HSNIHILEIDLRNF--DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL 148 (267)
T ss_dssp CTTEEEEECCTTCG--GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCh--HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence 34789999999999 999999999999998 89999999998633677888899999999999999999999999999
Q ss_pred HHhc------CC----CCeEEEeecccccccCC-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 86 MKES------KA----GGSIVFLTSIIGAERGL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 86 l~~~------~~----~g~iv~iss~~~~~~~~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
|+++ +. .++||++||..+....+ .++...|+++|++++.+++.++.+++++||++++|+||++.|++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 228 (267)
T 1sny_A 149 LKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG 228 (267)
T ss_dssp HHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred HhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence 9875 21 48999999998863321 1367889999999999999999999999999999999999999874
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.. ...+|+ ++|+.++++++.....++|+.+.+|||.
T Consensus 229 ~~-----------------~~~~~~-~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 229 SS-----------------APLDVP-TSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp TT-----------------CSBCHH-HHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred CC-----------------CCCCHH-HHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 31 224555 9999999999988888999999999986
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=207.83 Aligned_cols=197 Identities=9% Similarity=0.017 Sum_probs=159.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC------------CCCCC-------------------
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG------------KMQDP------------------- 56 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~------------~~~~~------------------- 56 (219)
+.++..+.||++|. ++++++++++.+++|++|+||||||... ...++
T Consensus 122 g~~~~~~~~Dvtd~--~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~ 199 (418)
T 4eue_A 122 GLVAKNFIEDAFSN--ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLK 199 (418)
T ss_dssp TCCEEEEESCTTCH--HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEE
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccc
Confidence 55789999999999 9999999999999999999999999730 12233
Q ss_pred --CCcCHHHHHHHHHhhhchHH-HHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCc--chhHHhHHHHHHHHHHHHH
Q 027744 57 --LQVGEDEFKKLVKINFVAPW-FLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGA--AAYGACAASIHQLVRTAAM 131 (219)
Q Consensus 57 --~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~--~~y~~sK~a~~~l~~~l~~ 131 (219)
.+.+.++|+..+++|..+.+ .+++.+.+.+...+ +|+||++||..+... .+.+ +.|+++|+|+++|+++++.
T Consensus 200 ~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~--~p~~~~~aY~ASKaAL~~ltrsLA~ 276 (418)
T 4eue_A 200 KVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRT--YKIYREGTIGIAKKDLEDKAKLINE 276 (418)
T ss_dssp EECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGG--TTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCC--CCccccHHHHHHHHHHHHHHHHHHH
Confidence 45799999999999999888 77888776544433 689999999988743 5666 9999999999999999999
Q ss_pred HhCC-CCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 132 EIGK-HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 132 e~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|+++ +|||+|+|+||.+.|++.......+..... ...++++.++++ ++++.+.+|+++ ...+|+.+.+|+|..+
T Consensus 277 ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~--~~~~mk~~G~~E-~v~e~~~~L~sd--~~~~g~~~~~D~~~~~ 351 (418)
T 4eue_A 277 KLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAI--LYKVMKEKNIHE-NCIMQIERMFSE--KIYSNEKIQFDDKGRL 351 (418)
T ss_dssp HHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHH--HHHHHHHTTCCC-CHHHHHHHHHHH--TTSSSSCCCCCTTSCE
T ss_pred HhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHH--HHHHHhhcCChH-HHHHHHHHHhhc--cccCCCccccCCCcee
Confidence 9999 999999999999999987654432222211 223566778888 999999999986 5678999999997765
Q ss_pred c-CCC
Q 027744 211 T-RPR 214 (219)
Q Consensus 211 ~-~~~ 214 (219)
. ..|
T Consensus 352 r~d~~ 356 (418)
T 4eue_A 352 RMDDL 356 (418)
T ss_dssp ESCTT
T ss_pred eCChh
Confidence 5 444
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=197.24 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=126.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.+++.++++++|+|+
T Consensus 58 ~~~~~~~~~Dvtd~--~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~ 134 (324)
T 3u9l_A 58 DVDLRTLELDVQSQ--VSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR 134 (324)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCSEEEECCCCC-BCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeecCCH--HHHHHHHHHHHHHcCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 678889999999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+++ .|+||++||..+. .+..++...|+++|+|+++++++++.|+++.||++++|+||++.|++.
T Consensus 135 ~~~-~g~iV~isS~~~~-~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 135 RQK-HGLLIWISSSSSA-GGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp HHT-CEEEEEECCGGGT-SCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred hcC-CCEEEEEecchhc-cCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 876 7999999999886 332466789999999999999999999999999999999999997753
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=199.06 Aligned_cols=186 Identities=17% Similarity=0.205 Sum_probs=145.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|. ++++++++++. ++++|+||||||+. ...++.+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 56 ~~~~~~~~~Dv~d~--~~v~~~~~~~~--~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 130 (327)
T 1jtv_A 56 PGSLETLQLDVRDS--KSVAAARERVT--EGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (327)
T ss_dssp TTSEEEEECCTTCH--HHHHHHHHTCT--TSCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHh--cCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45789999999999 99999999883 58899999999985 567788899999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH-------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE------- 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------- 160 (219)
+++ .|+||++||..+... .+....|+++|+++++|+++++.|++++||++++|+||+|.|++........
T Consensus 131 ~~~-~g~IV~isS~~~~~~--~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~ 207 (327)
T 1jtv_A 131 RRG-SGRVLVTGSVGGLMG--LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRT 207 (327)
T ss_dssp HHT-CEEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTS
T ss_pred hcC-CCEEEEECCcccccC--CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccC
Confidence 765 699999999998733 5788999999999999999999999999999999999999999865432210
Q ss_pred --HHHHHHHh-----hcCCCCC-CCCchhHHHHHHHhccC---CCCcccceEE
Q 027744 161 --RAVKLVRE-----AAPLHRW-LDVKNDLASTVIYLISD---GSRYMTGTTI 202 (219)
Q Consensus 161 --~~~~~~~~-----~~~~~~~-~~~~~dva~~~~~l~s~---~~~~~~G~~i 202 (219)
.....+.. ..++++. .+|+ |+|+.++++++. ..++++|+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~pe-dvA~~i~~l~~~~~~~~~~~tg~~~ 259 (327)
T 1jtv_A 208 DIHTFHRFYQYLAHSKQVFREAAQNPE-EVAEVFLTALRAPKPTLRYFTTERF 259 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCBCHH-HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred CHHHHHHHHHHHHHHHHhhhhcCCCHH-HHHHHHHHHHcCCCCCeEEEeCchH
Confidence 00110000 1122333 3566 999999999874 3456677543
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=190.78 Aligned_cols=178 Identities=19% Similarity=0.185 Sum_probs=139.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. ++++++++++.+.+|++|+||||||+. ...++.+.+.++|++++++|+.|++++++.++|.|.+
T Consensus 59 ~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~lv~nAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (319)
T 3ioy_A 59 PEVMGVQLDVASR--EGFKMAADEVEARFGPVSILCNNAGVN-LFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVE 135 (319)
T ss_dssp GGEEEEECCTTCH--HHHHHHHHHHHHHTCCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCH--HHHHHHHHHHHHhCCCCCEEEECCCcC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4799999999999 999999999999999999999999985 6788899999999999999999999999999999987
Q ss_pred c-----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 89 S-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 89 ~-----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
+ ...|+||++||.++... .++...|++||+|+++|+++++.|+.+.||++++|+||+|.|++...........
T Consensus 136 ~~~~~~~~~g~iV~isS~a~~~~--~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~ 213 (319)
T 3ioy_A 136 RVKAGEQKGGHVVNTASMAAFLA--AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDAL 213 (319)
T ss_dssp HHHTTSCCCCEEEEECCGGGTCC--CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--------------
T ss_pred hhhccCCCCcEEEEecccccccC--CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhh
Confidence 5 22689999999999743 5788999999999999999999999999999999999999999876432211100
Q ss_pred -H--------HHHhhcCCCCC-CCCchhHHHHHHHhccC
Q 027744 164 -K--------LVREAAPLHRW-LDVKNDLASTVIYLISD 192 (219)
Q Consensus 164 -~--------~~~~~~~~~~~-~~~~~dva~~~~~l~s~ 192 (219)
. ......+.... .+|+ ++|+.++..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~pe-~vA~~~~~al~~ 251 (319)
T 3ioy_A 214 KGEVKPVDKTAVERLAGVHEFGMEPD-VIGARVIEAMKA 251 (319)
T ss_dssp ---------------CCGGGSSBCHH-HHHHHHHHHHHT
T ss_pred cccccchhHHHHHHHHHhhhcCCCHH-HHHHHHHHHHHc
Confidence 0 00011111111 4555 999999998864
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.2e-29 Score=191.02 Aligned_cols=179 Identities=18% Similarity=0.266 Sum_probs=124.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|+++. ++ ...+.+..+.++++|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|.|++
T Consensus 48 ~~~~~~~~D~~~~--~~-~~~~~~~~~~~~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 123 (245)
T 3e9n_A 48 EGVEPIESDIVKE--VL-EEGGVDKLKNLDHVDTLVHAAAVA-RDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRA 123 (245)
T ss_dssp TTEEEEECCHHHH--HH-TSSSCGGGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCCcceecccchH--HH-HHHHHHHHHhcCCCCEEEECCCcC-CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 3578899999987 55 455555556778999999999986 6677888899999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ +|+||++||..+... .++...|+++|+|++.|+++++.|++++||++++|+||++.|++......... .
T Consensus 124 ~--~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~------~ 193 (245)
T 3e9n_A 124 A--SGCVIYINSGAGNGP--HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG------T 193 (245)
T ss_dssp H--TCEEEEEC------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------
T ss_pred c--CCeEEEEcCcccccC--CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh------c
Confidence 6 489999999998733 68889999999999999999999999999999999999999998765432211 2
Q ss_pred hcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 169 AAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 169 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
..+.+++.+|+ |+|+++++|++... +++++++|
T Consensus 194 ~~~~~~~~~p~-dvA~~i~~l~~~~~---~~~~~~i~ 226 (245)
T 3e9n_A 194 NFRPEIYIEPK-EIANAIRFVIDAGE---TTQITNVD 226 (245)
T ss_dssp --CCGGGSCHH-HHHHHHHHHHTSCT---TEEEEEEE
T ss_pred ccccccCCCHH-HHHHHHHHHHcCCC---ccceeeeE
Confidence 24456677887 99999999997643 45666554
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=185.92 Aligned_cols=167 Identities=16% Similarity=0.170 Sum_probs=144.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++++++++.+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+++.|+
T Consensus 79 ~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~g~iD~li~~Ag~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 155 (272)
T 1yb1_A 79 GAKVHTFVVDCSNR--EDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT 155 (272)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeeCCCH--HHHHHHHHHHHHHCCCCcEEEECCCcC-CCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45789999999999 999999999999999999999999986 567778888999999999999999999999999998
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC---CCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~---~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+++ .++||++||..+... .++...|+++|++++.++++++.|+. +.||++++|+||+++|++....
T Consensus 156 ~~~-~~~iv~isS~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------- 224 (272)
T 1yb1_A 156 KNN-HGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-------- 224 (272)
T ss_dssp HTT-CEEEEEECCCC-CCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--------
T ss_pred hcC-CCEEEEEechhhcCC--CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc--------
Confidence 765 689999999988632 46778999999999999999999996 6799999999999999985421
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
..+++++.+|+ |+|+.+++++...
T Consensus 225 ----~~~~~~~~~~~-dva~~i~~~~~~~ 248 (272)
T 1yb1_A 225 ----STSLGPTLEPE-EVVNRLMHGILTE 248 (272)
T ss_dssp ----HHHHCCCCCHH-HHHHHHHHHHHTT
T ss_pred ----cccccCCCCHH-HHHHHHHHHHHcC
Confidence 11234567777 9999999999754
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-27 Score=181.93 Aligned_cols=174 Identities=18% Similarity=0.132 Sum_probs=143.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcC-HHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVG-EDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++.++.+|++|. ++++.+++++.+.++++|+||||||.. .... ...+ .++|+.++++|+.+++++++.+++.|
T Consensus 53 ~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 128 (276)
T 1wma_A 53 GLSPRFHQLDIDDL--QSIRALRDFLRKEYGGLDVLVNNAGIA-FKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 128 (276)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHHHHHHSSEEEEEECCCCC-CCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred CCeeEEEECCCCCH--HHHHHHHHHHHHhcCCCCEEEECCccc-ccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhh
Confidence 45788999999999 999999999999999999999999985 3222 3334 58999999999999999999999988
Q ss_pred HhcCCCCeEEEeeccccccc--C-------------------------------------CCCCcchhHHhHHHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAER--G-------------------------------------LYPGAAAYGACAASIHQLVR 127 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~--~-------------------------------------~~~~~~~y~~sK~a~~~l~~ 127 (219)
++ .|+||++||..+... . +..+...|+++|++++.+++
T Consensus 129 ~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~ 205 (276)
T 1wma_A 129 KP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSR 205 (276)
T ss_dssp EE---EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHH
T ss_pred CC---CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHH
Confidence 64 479999999876521 0 00123799999999999999
Q ss_pred HHHHHhCC----CCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC--CCcccceE
Q 027744 128 TAAMEIGK----HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG--SRYMTGTT 201 (219)
Q Consensus 128 ~l~~e~~~----~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~ 201 (219)
.+++++++ .||++++|+||++.|++... .++.+|+ |+|+++++|++.. ..+++|++
T Consensus 206 ~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~-~~a~~~~~l~~~~~~~~~~~G~~ 267 (276)
T 1wma_A 206 IHARKLSEQRKGDKILLNACCPGWVRTDMAGP-----------------KATKSPE-EGAETPVYLALLPPDAEGPHGQF 267 (276)
T ss_dssp HHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----------------TCSBCHH-HHTHHHHHHHSCCTTCCCCCSCE
T ss_pred HHHHHhhcccCCCceEEEEecCCccccCcCCc-----------------cccCChh-HhhhhHhhhhcCcccccccCceE
Confidence 99999987 79999999999999998653 1235666 9999999999854 36899998
Q ss_pred EEecCC
Q 027744 202 IYVDGA 207 (219)
Q Consensus 202 i~~dgG 207 (219)
+. +++
T Consensus 268 ~~-~~~ 272 (276)
T 1wma_A 268 VS-EKR 272 (276)
T ss_dssp EE-TTE
T ss_pred ec-cCc
Confidence 87 544
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=178.07 Aligned_cols=173 Identities=19% Similarity=0.128 Sum_probs=139.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-----------------------------CCCCCC
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-----------------------------MQDPLQ 58 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-----------------------------~~~~~~ 58 (219)
+.+++++.+|++|.+ ++++.+++.+.+.++++|+||||||+... ..++.+
T Consensus 61 ~~~~~~~~~Dl~~~~-~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (311)
T 3o26_A 61 HENVVFHQLDVTDPI-ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMS 139 (311)
T ss_dssp CCSEEEEECCTTSCH-HHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEE
T ss_pred CCceEEEEccCCCcH-HHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccc
Confidence 457999999999942 68999999999999999999999998531 124556
Q ss_pred cCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC-------------------------------
Q 027744 59 VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG------------------------------- 107 (219)
Q Consensus 59 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~------------------------------- 107 (219)
.+.++|++.+++|+.+++.+++.++|+|++++ .|+||++||..+....
T Consensus 140 ~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (311)
T 3o26_A 140 ETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKD 218 (311)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred cchhhhhhheeeeeehHHHHHHHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhh
Confidence 78999999999999999999999999998766 7999999999876321
Q ss_pred ----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCC
Q 027744 108 ----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177 (219)
Q Consensus 108 ----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (219)
..++...|+++|+|+++|++.+++++++ |++++|+||+|.|++...... .+
T Consensus 219 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~~-----------------~~ 279 (311)
T 3o26_A 219 FKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGN-----------------YT 279 (311)
T ss_dssp HHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCCS-----------------BC
T ss_pred hhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCCC-----------------CC
Confidence 0135578999999999999999999965 999999999999998654211 23
Q ss_pred CchhHHHHHHHhccCCCCcccceEE
Q 027744 178 VKNDLASTVIYLISDGSRYMTGTTI 202 (219)
Q Consensus 178 ~~~dva~~~~~l~s~~~~~~~G~~i 202 (219)
++ +.++.+++++.......+|..+
T Consensus 280 ~~-~~a~~~~~~~~~~~~~~~g~~~ 303 (311)
T 3o26_A 280 AE-EGAEHVVRIALFPDDGPSGFFY 303 (311)
T ss_dssp HH-HHHHHHHHHHTCCSSCCCSCEE
T ss_pred HH-HHHHHHHHHHhCCCCCCCceEe
Confidence 44 8899998887654444444433
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-27 Score=217.98 Aligned_cols=189 Identities=15% Similarity=0.184 Sum_probs=153.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH-----hC-CCcEEEeccccCCCCC-CCCCcC--HHHHHHHHHhhhchHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI-----LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFL 78 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-----~g-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l 78 (219)
+.++.+++||++|. ++++++++++.+. +| ++|+||||||+. ... ++.+.+ .++|++++++|+.+++.+
T Consensus 729 g~~v~~v~~DVsd~--~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~-~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l 805 (1887)
T 2uv8_A 729 GSTLIVVPFNQGSK--QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGC 805 (1887)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCC-CCSBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred CCeEEEEEecCCCH--HHHHHHHHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCcchHHHHHHHHHHHHHHHHH
Confidence 56789999999999 9999999999988 66 999999999986 455 788888 899999999999999999
Q ss_pred HHHH--HHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHH-HHHHHHHhCCCCeEEEEeecCCcc-CCCCc
Q 027744 79 LKAV--GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL-VRTAAMEIGKHKIRVNGIARGLHL-QDEYP 154 (219)
Q Consensus 79 ~~~~--~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l-~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~ 154 (219)
++.+ .+.|++++ +|+||++||..+.. ++...|+++|+|+.+| ++.++.++++. |+||+|+||++. |++..
T Consensus 806 ~~a~~~lp~m~~~~-~G~IVnISS~ag~~----gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~ 879 (1887)
T 2uv8_A 806 VKKQKSARGIETRP-AQVILPMSPNHGTF----GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 879 (1887)
T ss_dssp HHHHHHTTTCCSCC-EEEEEEECSCTTCS----SCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred HHHHHhhhhhhhCC-CCEEEEEcChHhcc----CCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccc
Confidence 9988 67776654 58999999998862 3678999999999999 99999999887 999999999999 78765
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEec--CCcccc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVD--GAQSIT 211 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~ 211 (219)
..... .... ...++ +..+|+ |+|+.++||+++. ..+++|+.+.+| ||+...
T Consensus 880 ~~~~~---~~~~-~~~pl-r~~sPE-EVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~ 933 (1887)
T 2uv8_A 880 ANNII---AEGI-EKMGV-RTFSQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 933 (1887)
T ss_dssp -CCTT---HHHH-HTTSC-CCEEHH-HHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred cchhH---HHHH-HhcCC-CCCCHH-HHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence 31111 1111 33444 445676 9999999999987 678999999875 998654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-27 Score=214.16 Aligned_cols=189 Identities=15% Similarity=0.186 Sum_probs=155.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH-----hC-CCcEEEeccccCCCCC-CCCCcC--HHHHHHHHHhhhchHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI-----LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFL 78 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-----~g-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l 78 (219)
+.++.+++||++|. ++++++++++.+. +| ++|+||||||+. ... ++.+.+ .++|++++++|+.+++.+
T Consensus 530 Ga~V~vV~~DVTD~--esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~-~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~L 606 (1688)
T 2pff_A 530 GSTLIVVPFNQGSK--QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIP-EQGIELEHIDSKSEFAHRIMLTNILRMMGC 606 (1688)
T ss_dssp TCEEEEEECCSSST--THHHHHHHHHHSCTTSSSCCCCCCEEECCCCCC-CCSBCSSSCTTHHHHHHHHTTHHHHHHHHH
T ss_pred CCeEEEEEeCCCCH--HHHHHHHHHHHHhccccccCCCCeEEEECCCcC-CCCCChhhCCCCHHHHHHHHHHHHHHHHHH
Confidence 56799999999999 9999999999988 77 999999999986 455 788888 899999999999999999
Q ss_pred HHHH--HHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHH-HHHHHHHhCCCCeEEEEeecCCcc-CCCCc
Q 027744 79 LKAV--GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL-VRTAAMEIGKHKIRVNGIARGLHL-QDEYP 154 (219)
Q Consensus 79 ~~~~--~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l-~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~ 154 (219)
++.+ .+.|++++ +|+||++||..+.. ++...|+++|+|+++| .+.++.++++. |++|+|+||++. |++..
T Consensus 607 tqaa~~lp~M~krg-gGrIVnISSiAG~~----Gg~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~ 680 (1688)
T 2pff_A 607 VKKQKSARGIETRP-AQVILPMSPNHGTF----GGDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 680 (1688)
T ss_dssp HHHHHHHHTCTTSC-EEECCCCCSCTTTS----SCBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred HHHHHhChHHHhCC-CCEEEEEEChHhcc----CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence 9998 77887654 58999999998862 3678999999999999 78888888887 999999999999 67754
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEec--CCcccc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVD--GAQSIT 211 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~~ 211 (219)
.... ..... ...++ +..+|+ |+|+++++|+++. ..+++|+.+.+| ||+...
T Consensus 681 ~~e~---~~~~l-~~ipl-R~~sPE-EVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~ 734 (1688)
T 2pff_A 681 ANNI---IAEGI-EKMGV-RTFSQK-EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 734 (1688)
T ss_dssp TTTT---CSTTT-SSSSC-CCCCCC-TTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred CchH---HHHHH-HhCCC-CCCCHH-HHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence 3100 00001 22333 445777 9999999999987 688999999876 998654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=178.67 Aligned_cols=182 Identities=18% Similarity=0.280 Sum_probs=143.0
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+.+|+++. ++++++++++ .+++|++|||||.... .+.|+..+++|+.+++.+++++.+.|++.+ .+
T Consensus 42 ~~~D~~~~--~~~~~~~~~~---~~~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~ 107 (255)
T 2dkn_A 42 LSTPGGRE--TAVAAVLDRC---GGVLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QP 107 (255)
T ss_dssp TTSHHHHH--HHHHHHHHHH---TTCCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SC
T ss_pred ccCCcccH--HHHHHHHHHc---CCCccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-Cc
Confidence 46788887 7777777643 3789999999997521 123889999999999999999999998765 68
Q ss_pred eEEEeecccccccCC------------------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 94 SIVFLTSIIGAERGL------------------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 94 ~iv~iss~~~~~~~~------------------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
+||++||..++.... .++...|+++|++++.+++.+++++.++|+++++++||.+.
T Consensus 108 ~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~ 187 (255)
T 2dkn_A 108 AAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVE 187 (255)
T ss_dssp EEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBC
T ss_pred eEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCccc
Confidence 999999998862210 14567899999999999999999998889999999999999
Q ss_pred CCCCccccchHHHHHHHHhhc--CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 150 QDEYPIAVGQERAVKLVREAA--PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
|++.............. ... +.+++..++ |+|+++++++++...+++|+++++|||+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 249 (255)
T 2dkn_A 188 TPLLQASKADPRYGEST-RRFVAPLGRGSEPR-EVAEAIAFLLGPQASFIHGSVLFVDGGMDAL 249 (255)
T ss_dssp SHHHHHHHHCTTTHHHH-HSCCCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred chhhhhcccchhhHHHH-HHHHHHhcCCCCHH-HHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence 98765431111111111 122 667778887 9999999999887778999999999998765
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-26 Score=211.07 Aligned_cols=189 Identities=14% Similarity=0.179 Sum_probs=154.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHH---hC-CCcEEEeccccCCCCC-CCCCcC--HHHHHHHHHhhhchHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQI---LG-NLDAFVHCYTYEGKMQ-DPLQVG--EDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~---~g-~id~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~ 80 (219)
+.++.++.||++|. ++++++++++.++ +| ++|+||||||+. ... ++.+.+ .++|++++++|+.+++.+++
T Consensus 706 G~~v~~v~~DVsd~--esV~alv~~i~~~~~~~G~~IDiLVnNAGi~-~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~ 782 (1878)
T 2uv9_A 706 GSQLVVVPFNQGSK--QDVEALVNYIYDTKNGLGWDLDYVVPFAAIP-ENGREIDSIDSKSELAHRIMLTNLLRLLGAIK 782 (1878)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHCSSSSCCCCCSEEEECCCCC-CTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHhhcccCCCCcEEEeCcccc-cCCCChhhcCcCHHHHHHHHHHHHHHHHHHHH
Confidence 56799999999999 9999999999988 88 999999999986 455 788888 89999999999999999998
Q ss_pred H--HHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHH-hCCCCeEEEEeecCCcc-CCCCccc
Q 027744 81 A--VGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME-IGKHKIRVNGIARGLHL-QDEYPIA 156 (219)
Q Consensus 81 ~--~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e-~~~~gi~v~~i~pG~v~-t~~~~~~ 156 (219)
. +++.|++++ .|+||++||..+. . ++...|+++|+|+++|++.+..+ +++. |++|+|+||++. |++....
T Consensus 783 a~~~lp~M~~~~-~G~IVnISS~ag~-~---gg~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~ 856 (1878)
T 2uv9_A 783 TQKKERGYETRP-AQVILPLSPNHGT-F---GNDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN 856 (1878)
T ss_dssp HHHHHHTCCSCC-EEECCEECSCSSS-S---SCCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH
T ss_pred HHHHhHHHHhCC-CCEEEEEcchhhc-c---CCchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc
Confidence 7 677776654 5899999999886 2 35789999999999999876654 7776 999999999999 9987541
Q ss_pred cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCC-CcccceEEEe--cCCcccc
Q 027744 157 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS-RYMTGTTIYV--DGAQSIT 211 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~--dgG~~~~ 211 (219)
+...... ...++ +..+|+ |+|+.+++|+++.. .++||+.+.+ |||+...
T Consensus 857 ---~~~~~~~-~~~pl-r~~sPe-EVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~ 908 (1878)
T 2uv9_A 857 ---NLVAEGV-EKLGV-RTFSQQ-EMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI 908 (1878)
T ss_dssp ---HHTHHHH-HTTTC-CCBCHH-HHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred ---hhhHHHH-HhcCC-CCCCHH-HHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence 1111122 33444 445776 99999999999876 7899999887 5998654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-26 Score=169.46 Aligned_cols=165 Identities=13% Similarity=0.122 Sum_probs=139.2
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
.+.+|++|+ ++++++++++ +++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.+.+.|++ +
T Consensus 38 ~~~~D~~~~--~~~~~~~~~~----~~~d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~ 107 (202)
T 3d7l_A 38 DVTVDITNI--DSIKKMYEQV----GKVDAIVSATGSA-TFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---K 107 (202)
T ss_dssp SEECCTTCH--HHHHHHHHHH----CCEEEEEECCCCC-CCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---E
T ss_pred ceeeecCCH--HHHHHHHHHh----CCCCEEEECCCCC-CCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---C
Confidence 358999999 8888888764 8899999999985 5677788899999999999999999999999998854 4
Q ss_pred CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCC
Q 027744 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPL 172 (219)
Q Consensus 93 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~ 172 (219)
++||++||..+..+ .++...|+++|++++.+++.++.|+ ++|++++.++||++.|++... ....+.
T Consensus 108 ~~iv~~sS~~~~~~--~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~ 173 (202)
T 3d7l_A 108 GSFTLTTGIMMEDP--IVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------EPFFEG 173 (202)
T ss_dssp EEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHH-----------GGGSTT
T ss_pred CEEEEEcchhhcCC--CCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhh-----------hhhccc
Confidence 89999999988633 5788999999999999999999999 789999999999999875321 123445
Q ss_pred CCCCCCchhHHHHHHHhccCCCCcccceEEEec
Q 027744 173 HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVD 205 (219)
Q Consensus 173 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 205 (219)
.++..++ |+|++++++++ ..++|+++++|
T Consensus 174 ~~~~~~~-dva~~~~~~~~---~~~~G~~~~vd 202 (202)
T 3d7l_A 174 FLPVPAA-KVARAFEKSVF---GAQTGESYQVY 202 (202)
T ss_dssp CCCBCHH-HHHHHHHHHHH---SCCCSCEEEEC
T ss_pred cCCCCHH-HHHHHHHHhhh---ccccCceEecC
Confidence 5667776 99999998883 46899999987
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=170.94 Aligned_cols=165 Identities=21% Similarity=0.210 Sum_probs=137.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEec-cccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC-YTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++.+|++|. ++++++++++.+.+|++|++||| +|.. . ..+.+.+.++|++++++|+.+++.+++.++|.|+
T Consensus 78 ~~~~~~~~Dl~d~--~~v~~~~~~~~~~~g~iD~li~naag~~-~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (286)
T 1xu9_A 78 ASAHYIAGTMEDM--TFAEQFVAQAGKLMGGLDMLILNHITNT-S-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153 (286)
T ss_dssp SEEEEEECCTTCH--HHHHHHHHHHHHHHTSCSEEEECCCCCC-C-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCH--HHHHHHHHHHHHHcCCCCEEEECCccCC-C-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4789999999999 99999999999999999999999 5653 3 3555678999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHh--CCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+. .|+||++||..+... .++...|+++|++++.++++++.|+ ...||++++++||++.|++.......
T Consensus 154 ~~--~g~iv~isS~~~~~~--~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~------ 223 (286)
T 1xu9_A 154 QS--NGSIVVVSSLAGKVA--YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG------ 223 (286)
T ss_dssp HH--TCEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG------
T ss_pred HC--CCEEEEECCcccccC--CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc------
Confidence 65 489999999998733 5788999999999999999999999 57899999999999999875432111
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
. ......+|+ ++|+.++..+..
T Consensus 224 ---~-~~~~~~~~~-~vA~~i~~~~~~ 245 (286)
T 1xu9_A 224 ---I-VHMQAAPKE-ECALEIIKGGAL 245 (286)
T ss_dssp ---G-GGGGCBCHH-HHHHHHHHHHHT
T ss_pred ---c-ccCCCCCHH-HHHHHHHHHHhc
Confidence 0 011224555 999999988854
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=163.44 Aligned_cols=156 Identities=17% Similarity=0.232 Sum_probs=129.7
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCC
Q 027744 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKA 91 (219)
Q Consensus 12 ~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 91 (219)
+++++|++|+ +++++++++ ++++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++++ ++++
T Consensus 45 ~~~~~D~~~~--~~~~~~~~~----~~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~- 112 (207)
T 2yut_A 45 RALPADLADE--LEAKALLEE----AGPLDLLVHAVGKA-GRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK- 112 (207)
T ss_dssp EECCCCTTSH--HHHHHHHHH----HCSEEEEEECCCCC-CCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-
T ss_pred cEEEeeCCCH--HHHHHHHHh----cCCCCEEEECCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-
Confidence 7889999999 898888876 68999999999985 5677778899999999999999999999998 2332
Q ss_pred CCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcC
Q 027744 92 GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAP 171 (219)
Q Consensus 92 ~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~ 171 (219)
.++||++||..++.+ .++...|+++|++++.+++.++++++++|+++++++||++.|++... ...+
T Consensus 113 ~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------~~~~ 178 (207)
T 2yut_A 113 GARAVFFGAYPRYVQ--VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP------------LGGP 178 (207)
T ss_dssp EEEEEEECCCHHHHS--STTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------GTSC
T ss_pred CcEEEEEcChhhccC--CCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc------------cCCC
Confidence 589999999988733 57889999999999999999999999999999999999999987432 2234
Q ss_pred CCCCCCCchhHHHHHHHhccCCC
Q 027744 172 LHRWLDVKNDLASTVIYLISDGS 194 (219)
Q Consensus 172 ~~~~~~~~~dva~~~~~l~s~~~ 194 (219)
.+++..++ |+|++++++++...
T Consensus 179 ~~~~~~~~-dva~~~~~~~~~~~ 200 (207)
T 2yut_A 179 PKGALSPE-EAARKVLEGLFREP 200 (207)
T ss_dssp CTTCBCHH-HHHHHHHHHHC--C
T ss_pred CCCCCCHH-HHHHHHHHHHhCCC
Confidence 56777887 99999999997543
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=172.18 Aligned_cols=170 Identities=16% Similarity=0.126 Sum_probs=137.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. ++++++++++. +++++|+||||||+. ....+.+.+.++|++++++|+.+++++.+.+.+.++
T Consensus 314 g~~v~~~~~Dvtd~--~~v~~~~~~i~-~~g~id~vVh~AGv~-~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~ 389 (525)
T 3qp9_A 314 GATATVVTCDLTDA--EAAARLLAGVS-DAHPLSAVLHLPPTV-DSEPLAATDADALARVVTAKATAALHLDRLLREAAA 389 (525)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHTSC-TTSCEEEEEECCCCC-CCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCEEEEEECCCCCH--HHHHHHHHHHH-hcCCCcEEEECCcCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 56799999999999 99999999998 789999999999996 668899999999999999999999999999999987
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++..++||++||.++.. + .+++..|+++|+++++|+ ++++.+|+++++|+||++.|+|..... .. ...
T Consensus 390 ~~~~~~~iV~~SS~a~~~-g-~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~---~~-~~~- 458 (525)
T 3qp9_A 390 AGGRPPVLVLFSSVAAIW-G-GAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGA---TG-ERL- 458 (525)
T ss_dssp ---CCCEEEEEEEGGGTT-C-CTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSH---HH-HHH-
T ss_pred cCCCCCEEEEECCHHHcC-C-CCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchh---hH-HHH-
Confidence 654358999999999974 3 688999999999999884 567788999999999999998874321 11 111
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGS 194 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~ 194 (219)
....+ ...+|+ ++++.+.++++...
T Consensus 459 ~~~g~-~~l~pe-e~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 459 RRLGL-RPLAPA-TALTALDTALGHGD 483 (525)
T ss_dssp HHTTB-CCBCHH-HHHHHHHHHHHHTC
T ss_pred HhcCC-CCCCHH-HHHHHHHHHHhCCC
Confidence 11111 224555 99999999997543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-22 Score=192.32 Aligned_cols=190 Identities=16% Similarity=0.137 Sum_probs=138.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHH----HhCCCcEEEecccc----CCCCCCCCCcCHHH----HHHHHHhhhchH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQ----ILGNLDAFVHCYTY----EGKMQDPLQVGEDE----FKKLVKINFVAP 75 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~----~~g~id~lv~~ag~----~~~~~~~~~~~~~~----~~~~~~~n~~~~ 75 (219)
+.++..++||++|. ++++++++++.+ .+|++|+||||||+ ........+.+.++ ++..+++|+.++
T Consensus 2190 G~~~~~v~~Dvtd~--~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2190 DATLWVVPANMASY--SDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred CCeEEEEEecCCCH--HHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999998 89999999999997 21112223333344 455599999999
Q ss_pred HHHHHHHHHHHHhcCCCC---eEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHH--hCCCCeEEEEeecCCcc-
Q 027744 76 WFLLKAVGRRMKESKAGG---SIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHL- 149 (219)
Q Consensus 76 ~~l~~~~~~~l~~~~~~g---~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e--~~~~gi~v~~i~pG~v~- 149 (219)
+.+++.+.+.|...+.++ .|+.+++..+. .++...|+++|+|+.+|+|+++.| +++ +|++|++.||+|.
T Consensus 2268 ~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~----~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D 2268 QRLISGLSKIGAERDIASRLHVVLPGSPNRGM----FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKG 2342 (3089)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS----CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEEC
T ss_pred HHHHHHHHHHHHHcCCCceeEEEEECCccccc----CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCC
Confidence 999999999998764222 22333332221 345678999999999999999999 765 6999999999999
Q ss_pred CCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcc-cceEEEec--CCccc
Q 027744 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYM-TGTTIYVD--GAQSI 210 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~d--gG~~~ 210 (219)
|++....... .... ...+.++ .+|+ |+|.+++||+|+.++.+ +|+.+.+| ||+..
T Consensus 2343 T~l~~~~~~~---~~~~-~~~~~r~-~~Pe-EIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D 2343 TGLMGQNDAI---VSAV-EEAGVTT-YTTD-EMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp STTTTTTTTT---HHHH-GGGSCBC-EEHH-HHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred CcccccchhH---HHHH-HhcCCCC-CCHH-HHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence 6655432111 1111 3344444 4666 99999999999876665 45666666 99965
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.3e-21 Score=167.54 Aligned_cols=169 Identities=12% Similarity=0.157 Sum_probs=131.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|. ++++++++++.+.+ ++|++|||||+. ....+.+++.++|++.+++|+.|++++.+.+.+.|
T Consensus 583 G~~v~~~~~Dvsd~--~~v~~~~~~~~~~~-~id~lVnnAGv~-~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l- 657 (795)
T 3slk_A 583 GAEVSLQACDVADR--ETLAKVLASIPDEH-PLTAVVHAAGVL-DDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV- 657 (795)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHTSCTTS-CEEEEEECCCCC-CCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-
T ss_pred CCcEEEEEeecCCH--HHHHHHHHHHHHhC-CCEEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-
Confidence 66899999999999 99999999998776 899999999997 66889999999999999999999999999987655
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+||++||.++.. + .+++..|+++|+ |+++++++++++||++++|+||++.|+............ ..
T Consensus 658 ------~iV~~SS~ag~~-g-~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~-~~- 723 (795)
T 3slk_A 658 ------ALVLFSSVSGVL-G-SGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQD-RL- 723 (795)
T ss_dssp ------EEEEEEETHHHH-T-CSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHH-HH-
T ss_pred ------EEEEEccHHhcC-C-CCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHH-HH-
Confidence 699999999984 3 689999999996 556666677778999999999999988765432222221 11
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYM 197 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~ 197 (219)
....+.. ..++ ++.+.+..++......+
T Consensus 724 ~~~g~~~-l~~~-e~~~~~~~~l~~~~~~~ 751 (795)
T 3slk_A 724 ARSGLLP-ISTE-EGLSQFDAACGGAHTVV 751 (795)
T ss_dssp HHTTBCC-CCHH-HHHHHHHHHHTSSCSSC
T ss_pred HhcCCCC-CCHH-HHHHHHHHHHhCCCcEE
Confidence 2223322 3444 67777666665444333
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-20 Score=156.03 Aligned_cols=167 Identities=13% Similarity=0.129 Sum_probs=128.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. ++++++++++.+. +++|++|||||+.....++.+.+.++|++++++|+.+++++.+.+.+.
T Consensus 291 g~~v~~~~~Dvtd~--~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-- 365 (496)
T 3mje_A 291 GVRVTIAACDAADR--EALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-- 365 (496)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--
T ss_pred CCeEEEEEccCCCH--HHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence 56899999999999 9999999998776 789999999998646678899999999999999999999998876543
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
. .++||++||..+.. + .+++..|+++|+++++|++.++ .+|+++++|+||.+.++....... ......
T Consensus 366 --~-~~~iV~~SS~a~~~-g-~~g~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~--~~~~l~- 433 (496)
T 3mje_A 366 --D-LDAFVLFSSGAAVW-G-SGGQPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPE--VHDRLV- 433 (496)
T ss_dssp --C-CSEEEEEEEHHHHT-T-CTTCHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC--------CHHHH-
T ss_pred --C-CCEEEEEeChHhcC-C-CCCcHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccChH--HHHHHH-
Confidence 2 58999999999974 3 5889999999999999887544 469999999999887765433211 111111
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGS 194 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~ 194 (219)
...+ ...+|+ ++++.+.+++....
T Consensus 434 -~~g~-~~l~pe-~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 434 -RQGV-LAMEPE-HALGALDQMLENDD 457 (496)
T ss_dssp -HTTE-EEECHH-HHHHHHHHHHHHTC
T ss_pred -hcCC-CCCCHH-HHHHHHHHHHcCCC
Confidence 1111 113555 99999999886543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=132.61 Aligned_cols=184 Identities=15% Similarity=0.134 Sum_probs=133.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.+++++ +++|+|||+||... .+.+.++++..+++|+.++.++++++.+.|.
T Consensus 49 ~~~~~~~~~Dl~d~--~~~~~~~~~-----~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~ 116 (361)
T 1kew_A 49 SNRYNFEHADICDS--AEITRIFEQ-----YQPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWS 116 (361)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHH-----HCCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCH--HHHHHHHhh-----cCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45789999999998 888888765 26999999999752 1234467888999999999999999999875
Q ss_pred hcC----CCCeEEEeecccccccC-------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEee
Q 027744 88 ESK----AGGSIVFLTSIIGAERG-------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144 (219)
Q Consensus 88 ~~~----~~g~iv~iss~~~~~~~-------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~ 144 (219)
..+ .+++||++||...+... +..+...|+.+|++++.+++.+++++ |+++++++
T Consensus 117 ~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vr 193 (361)
T 1kew_A 117 ALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTN 193 (361)
T ss_dssp TSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEE
T ss_pred CcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEe
Confidence 311 12599999997643111 12456789999999999999999886 79999999
Q ss_pred cCCccCCCCcccc-chHHHHHHHHhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 145 RGLHLQDEYPIAV-GQERAVKLVREAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 145 pG~v~t~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
||.+.++...... ......... ...+ ...+..++ |+|++++++++.. .+|+++++++|..++
T Consensus 194 p~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~s 265 (361)
T 1kew_A 194 CSNNYGPYHFPEKLIPLVILNAL-EGKPLPIYGKGDQIRDWLYVE-DHARALHMVVTEG---KAGETYNIGGHNEKK 265 (361)
T ss_dssp ECEEESTTCCTTSHHHHHHHHHH-HTCCEEEETTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred eceeECCCCCcccHHHHHHHHHH-cCCCceEcCCCceeEeeEEHH-HHHHHHHHHHhCC---CCCCEEEecCCCeee
Confidence 9999998754211 111111111 2111 12234455 9999999999643 479999999997543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.6e-17 Score=130.48 Aligned_cols=178 Identities=13% Similarity=0.081 Sum_probs=129.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.+++ +++|+|||+||.... ..+.++++..+++|+.++.++++++.+.
T Consensus 53 ~~~~~~~~~Dl~d~--~~~~~~~-------~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-- 116 (336)
T 2hun_A 53 DPRYTFVKGDVADY--ELVKELV-------RKVDGVVHLAAESHV-----DRSISSPEIFLHSNVIGTYTLLESIRRE-- 116 (336)
T ss_dssp CTTEEEEECCTTCH--HHHHHHH-------HTCSEEEECCCCCCH-----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCceEEEEcCCCCH--HHHHHHh-------hCCCEEEECCCCcCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence 45789999999998 7777776 369999999997421 1244567889999999999999999876
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV- 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~- 157 (219)
. . .++||++||...+... +..+...|+.+|.+.+.+++.++.++ |+++++++||.+.++......
T Consensus 117 ~-~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~ 191 (336)
T 2hun_A 117 N-P-EVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKL 191 (336)
T ss_dssp C-T-TSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSH
T ss_pred C-C-CcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCch
Confidence 1 1 4799999998654111 23456789999999999999999875 799999999999998754211
Q ss_pred chHHHHHHHHhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......... ...+ ...+..++ |+|++++++++.. .+|+++++++|..++
T Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~---~~g~~~~v~~~~~~s 249 (336)
T 2hun_A 192 IPKTIIRAS-LGLKIPIYGTGKNVRDWLYVE-DHVRAIELVLLKG---ESREIYNISAGEEKT 249 (336)
T ss_dssp HHHHHHHHH-TTCCEEEETC---CEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEEC
T ss_pred HHHHHHHHH-cCCCceEeCCCCceeeeEEHH-HHHHHHHHHHhCC---CCCCEEEeCCCCccc
Confidence 111111111 1111 12234445 9999999998642 479999999997543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=131.01 Aligned_cols=179 Identities=17% Similarity=0.155 Sum_probs=129.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++. +++|+|||+||.... ..+.++++..+++|+.++..+++++ +.+.
T Consensus 52 ~~~~~~~Dl~d~--~~~~~~~~~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-- 116 (321)
T 2pk3_A 52 NVEMISLDIMDS--QRVKKVISD-----IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN-- 116 (321)
T ss_dssp TEEEEECCTTCH--HHHHHHHHH-----HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--
T ss_pred eeeEEECCCCCH--HHHHHHHHh-----cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--
Confidence 578899999998 888888765 369999999997521 1223467889999999999999999 5542
Q ss_pred CCCCeEEEeecccccccC-----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 90 KAGGSIVFLTSIIGAERG-----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~-----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ .++||++||...+... +..+...|+.+|.+.+.+++.++++. |+++++++||.+.++.......
T Consensus 117 ~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~ 192 (321)
T 2pk3_A 117 L-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFV 192 (321)
T ss_dssp C-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSH
T ss_pred C-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCch
Confidence 2 5899999998765211 12456799999999999999998875 8999999999999987653211
Q ss_pred hHHHHHHHHh---h--cC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVRE---A--AP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~---~--~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.......... . .+ ...+..++ |+|++++++++.. .+|+++++++|..++
T Consensus 193 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~~---~~g~~~~i~~~~~~s 255 (321)
T 2pk3_A 193 TQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVR-DIVQAYWLLSQYG---KTGDVYNVCSGIGTR 255 (321)
T ss_dssp HHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEESCSCEEE
T ss_pred HHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHH-HHHHHHHHHHhCC---CCCCeEEeCCCCCee
Confidence 1111111111 1 11 12234455 9999999999753 478999999987543
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=139.06 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=124.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. +++.++++++ +.++++|+||||||+. ....+.+.+.++|++++++|+.+++++.+.+.+
T Consensus 278 g~~v~~~~~Dv~d~--~~v~~~~~~i-~~~g~ld~VIh~AG~~-~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~--- 350 (486)
T 2fr1_A 278 GARTTVAACDVTDR--ESVRELLGGI-GDDVPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELTRE--- 350 (486)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHTS-CTTSCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT---
T ss_pred CCEEEEEEeCCCCH--HHHHHHHHHH-HhcCCCcEEEECCccC-CCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc---
Confidence 56789999999999 9999999998 5568999999999986 567788899999999999999999999987643
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC-CCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD-EYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~-~~~~~~~~~~~~~~~ 166 (219)
.+ .++||++||..+.. + .+++..|+++|++++.|++.++ .+|+++++|+||.+.++ |.... . ....
T Consensus 351 -~~-~~~~V~~SS~a~~~-g-~~g~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~----~-~~~~ 417 (486)
T 2fr1_A 351 -LD-LTAFVLFSSFASAF-G-APGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGP----V-ADRF 417 (486)
T ss_dssp -SC-CSEEEEEEEHHHHT-C-CTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC-----------------C
T ss_pred -CC-CCEEEEEcChHhcC-C-CCCCHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchh----H-HHHH
Confidence 22 58999999998873 3 5788999999999999877544 45899999999999876 32211 0 0001
Q ss_pred HhhcCCC-CCCCCchhHHHHHHHhccCC
Q 027744 167 REAAPLH-RWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 167 ~~~~~~~-~~~~~~~dva~~~~~l~s~~ 193 (219)
...+ ...+++ ++++.+..++...
T Consensus 418 ---~~~g~~~i~~e-~~a~~l~~~l~~~ 441 (486)
T 2fr1_A 418 ---RRHGVIEMPPE-TACRALQNALDRA 441 (486)
T ss_dssp ---TTTTEECBCHH-HHHHHHHHHHHTT
T ss_pred ---HhcCCCCCCHH-HHHHHHHHHHhCC
Confidence 1111 224555 9999999988654
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-17 Score=138.18 Aligned_cols=160 Identities=19% Similarity=0.180 Sum_probs=124.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|. +++++++++ +++|+||||||+. ....+.+.+.++|+.++++|+.+++++.+.+.+. .
T Consensus 311 g~~v~~~~~Dvtd~--~~v~~~~~~-----~~ld~VVh~AGv~-~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~ 381 (511)
T 2z5l_A 311 GCEVVHAACDVAER--DALAALVTA-----YPPNAVFHTAGIL-DDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K 381 (511)
T ss_dssp TCEEEEEECCSSCH--HHHHHHHHH-----SCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T
T ss_pred CCEEEEEEeCCCCH--HHHHHHHhc-----CCCcEEEECCccc-CCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c
Confidence 56799999999999 888888876 7899999999986 5677888999999999999999999998876432 1
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc-cCCCCccccchHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v-~t~~~~~~~~~~~~~~~~ 166 (219)
+ .++||++||..+.. + .+++..|+++|++++.|++.+ ...|+++++|+||++ .|.|..... ... ..
T Consensus 382 --~-~~~~V~~SS~a~~~-g-~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~-~~~---~~ 448 (511)
T 2z5l_A 382 --G-LDAFVLFSSVTGTW-G-NAGQGAYAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAG-EES---LS 448 (511)
T ss_dssp --T-CCCEEEEEEGGGTT-C-CTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHH-HHH---HH
T ss_pred --C-CCEEEEEeCHHhcC-C-CCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCccccccc-HHH---HH
Confidence 2 58999999998873 3 578899999999999999865 356999999999998 677765421 111 11
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~ 193 (219)
.... ...+++ ++++.+..++...
T Consensus 449 ~~g~---~~l~~e-~~a~~l~~al~~~ 471 (511)
T 2z5l_A 449 RRGL---RAMDPD-AAVDALLGAMGRN 471 (511)
T ss_dssp HHTB---CCBCHH-HHHHHHHHHHHHT
T ss_pred hcCC---CCCCHH-HHHHHHHHHHhCC
Confidence 1111 234555 9999999988643
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=124.30 Aligned_cols=157 Identities=17% Similarity=0.174 Sum_probs=117.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.++++ ++|+||||||.. +.+.|++++++|+.+++++++++.+
T Consensus 42 ~~~~~~~~~Dl~d~--~~~~~~~~-------~~D~vi~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~a~~~--- 100 (267)
T 3rft_A 42 GPNEECVQCDLADA--NAVNAMVA-------GCDGIVHLGGIS---------VEKPFEQILQGNIIGLYNLYEAARA--- 100 (267)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHT-------TCSEEEECCSCC---------SCCCHHHHHHHHTHHHHHHHHHHHH---
T ss_pred CCCCEEEEcCCCCH--HHHHHHHc-------CCCEEEECCCCc---------CcCCHHHHHHHHHHHHHHHHHHHHH---
Confidence 46789999999998 88887775 689999999983 2345789999999999999999843
Q ss_pred hcCCCCeEEEeeccccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 88 ESKAGGSIVFLTSIIGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+ .++||++||..++.. .+..+...|+.+|.+.+.+++.+++++ |++++.|+||.+.++......
T Consensus 101 -~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~ 175 (267)
T 3rft_A 101 -HG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM 175 (267)
T ss_dssp -TT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH
T ss_pred -cC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc
Confidence 23 589999999887611 123566899999999999999999886 789999999999887544311
Q ss_pred chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 158 GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
. ..+..++ |+++.+..++... ...+.++++.++
T Consensus 176 ----~----------~~~~~~~-d~a~~~~~~~~~~--~~~~~~~~~~s~ 208 (267)
T 3rft_A 176 ----L----------STWFSHD-DFVSLIEAVFRAP--VLGCPVVWGASA 208 (267)
T ss_dssp ----H----------HHBCCHH-HHHHHHHHHHHCS--CCCSCEEEECCC
T ss_pred ----e----------eeEEcHH-HHHHHHHHHHhCC--CCCceEEEEeCC
Confidence 0 0123444 8888888888543 233455555444
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=9.8e-17 Score=128.97 Aligned_cols=179 Identities=15% Similarity=0.073 Sum_probs=130.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++.. ++|+|||+||.... ..+.++++..+++|+.++..+++++.+.+.
T Consensus 50 ~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~- 116 (347)
T 1orr_A 50 GNFEFVHGDIRNK--NDVTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS- 116 (347)
T ss_dssp CCCEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-
T ss_pred CceEEEEcCCCCH--HHHHHHHhcc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 3588999999998 8888887752 69999999997421 123567889999999999999999987643
Q ss_pred cCCCCeEEEeeccccccc-------------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEe
Q 027744 89 SKAGGSIVFLTSIIGAER-------------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGI 143 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~-------------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i 143 (219)
.++||++||...+.. .+..+...|+.+|.+.+.+++.+++++ |++++++
T Consensus 117 ---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~il 190 (347)
T 1orr_A 117 ---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVF 190 (347)
T ss_dssp ---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred ---CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEE
Confidence 368999999875421 012356789999999999999999886 7999999
Q ss_pred ecCCccCCCCccccc----hHHHHHHHHhhc----CCCC---------CCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 144 ARGLHLQDEYPIAVG----QERAVKLVREAA----PLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 144 ~pG~v~t~~~~~~~~----~~~~~~~~~~~~----~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
+||.+.++....... ............ ++.. +..++ |+|+++++++.. ....+|+++++++
T Consensus 191 rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~g~~~~v~~ 268 (347)
T 1orr_A 191 RHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAE-DMISLYFTALAN-VSKIRGNAFNIGG 268 (347)
T ss_dssp EECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHH-HHHHHHHHHHHT-HHHHTTCEEEESS
T ss_pred ccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHH-HHHHHHHHHHhc-cccCCCCEEEeCC
Confidence 999999987543211 111112221221 2221 33455 999999999863 2356899999999
Q ss_pred Cc
Q 027744 207 AQ 208 (219)
Q Consensus 207 G~ 208 (219)
|.
T Consensus 269 ~~ 270 (347)
T 1orr_A 269 TI 270 (347)
T ss_dssp CG
T ss_pred CC
Confidence 86
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=122.21 Aligned_cols=174 Identities=14% Similarity=0.176 Sum_probs=126.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ .+|+|||+||.... ..+.++++..+++|+.++..+++++.+.
T Consensus 54 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--- 116 (348)
T 1oc2_A 54 DRVELVVGDIADA--ELVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY--- 116 (348)
T ss_dssp SSEEEEECCTTCH--HHHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---
T ss_pred CCeEEEECCCCCH--HHHHHHhh-------cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh---
Confidence 5788999999998 77776654 46999999997521 1234567889999999999999999765
Q ss_pred cCCCCeEEEeecccccccC---------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 89 SKAGGSIVFLTSIIGAERG---------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~---------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
+++||++||...+... +..+...|+.+|.+.+.+++.+++++ |+++++++||.
T Consensus 117 ---~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~ 190 (348)
T 1oc2_A 117 ---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSN 190 (348)
T ss_dssp ---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECC
T ss_pred ---CCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeece
Confidence 2499999997654110 12456789999999999999999876 79999999999
Q ss_pred ccCCCCcccc-chHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 148 HLQDEYPIAV-GQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 148 v~t~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+.++...... ......... ...+. ..+..++ |+|++++.+++.. .+|+++++++|..+
T Consensus 191 v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~---~~g~~~~i~~~~~~ 258 (348)
T 1oc2_A 191 NYGPYQHIEKFIPRQITNIL-AGIKPKLYGEGKNVRDWIHTN-DHSTGVWAILTKG---RMGETYLIGADGEK 258 (348)
T ss_dssp EESTTCCTTSHHHHHHHHHH-HTCCCEEETTSCCEEECEEHH-HHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred eeCCCCCccchHHHHHHHHH-cCCCceEecCCCceEeeEEHH-HHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence 9998764211 111111111 22111 1234445 9999999998643 47999999998754
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=121.89 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=110.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++|||||... ...+++..+++|+.++..+++++. +
T Consensus 63 ~~~~~~~~D~~d~--~~~~~~~~-------~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~----~ 121 (242)
T 2bka_A 63 KNVNQEVVDFEKL--DDYASAFQ-------GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK----A 121 (242)
T ss_dssp GGCEEEECCGGGG--GGGGGGGS-------SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH----H
T ss_pred CCceEEecCcCCH--HHHHHHhc-------CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHH----H
Confidence 3678999999998 77776654 6999999999741 234678899999999988888754 3
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCe-EEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
.+ .++||++||..++ . ++...|+.+|++++.+++.+ ++ ++++++||.+.|+........ .......
T Consensus 122 ~~-~~~iv~~SS~~~~-~---~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~~-~~~~~~~ 188 (242)
T 2bka_A 122 GG-CKHFNLLSSKGAD-K---SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPGE-WLVRKFF 188 (242)
T ss_dssp TT-CCEEEEECCTTCC-T---TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHHH-HHHHHHH
T ss_pred CC-CCEEEEEccCcCC-C---CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHHH-HHHHHhh
Confidence 33 5799999998876 2 34568999999999998753 45 899999999999875432111 1111111
Q ss_pred hhcC----CCCCCCCchhHHHHHHHhccCCCC
Q 027744 168 EAAP----LHRWLDVKNDLASTVIYLISDGSR 195 (219)
Q Consensus 168 ~~~~----~~~~~~~~~dva~~~~~l~s~~~~ 195 (219)
...| .+++..++ |+|+++++++++...
T Consensus 189 ~~~~~~~~~~~~~~~~-dva~~~~~~~~~~~~ 219 (242)
T 2bka_A 189 GSLPDSWASGHSVPVV-TVVRAMLNNVVRPRD 219 (242)
T ss_dssp CSCCTTGGGGTEEEHH-HHHHHHHHHHTSCCC
T ss_pred cccCccccCCcccCHH-HHHHHHHHHHhCccc
Confidence 2233 34556666 999999999986543
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=122.54 Aligned_cols=176 Identities=14% Similarity=0.129 Sum_probs=125.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.+++ +++|+|||+||.... ..+.++++..+++|+.++.++++++.+.
T Consensus 54 ~~~~~~~~~Dl~d~--~~~~~~~-------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-- 117 (337)
T 1r6d_A 54 DPRLRFVHGDIRDA--GLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-- 117 (337)
T ss_dssp CTTEEEEECCTTCH--HHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT--
T ss_pred CCCeEEEEcCCCCH--HHHHHHh-------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence 35788999999998 7776665 579999999997421 1234567789999999999999998764
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV- 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~- 157 (219)
+ .++||++||...+... +..+...|+.+|.+.+.+++.+++++ |+++++++||.+.++......
T Consensus 118 --~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~ 191 (337)
T 1r6d_A 118 --G-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKL 191 (337)
T ss_dssp --T-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSH
T ss_pred --C-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCCh
Confidence 2 4699999997654111 23456789999999999999998875 799999999999988753211
Q ss_pred chHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 GQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......... ...+. ..+..++ |+|++++.++... .+|+++++++|..+
T Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~---~~g~~~~v~~~~~~ 248 (337)
T 1r6d_A 192 IPLFVTNLL-DGGTLPLYGDGANVREWVHTD-DHCRGIALVLAGG---RAGEIYHIGGGLEL 248 (337)
T ss_dssp HHHHHHHHH-TTCCEEEETTSCCEEEEEEHH-HHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred HHHHHHHHh-cCCCcEEeCCCCeeEeeEeHH-HHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence 111111111 21111 1223344 9999999998643 37899999998754
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-16 Score=121.78 Aligned_cols=158 Identities=12% Similarity=0.118 Sum_probs=114.7
Q ss_pred ce-EEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PV-EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
++ +++.+|++ . + +.+.++++|+||||||.. . .++++..+++|+.++.++++++..
T Consensus 65 ~~~~~~~~Dl~-~---~-------~~~~~~~~D~vi~~ag~~-~--------~~~~~~~~~~n~~~~~~l~~a~~~---- 120 (236)
T 3e8x_A 65 GASDIVVANLE-E---D-------FSHAFASIDAVVFAAGSG-P--------HTGADKTILIDLWGAIKTIQEAEK---- 120 (236)
T ss_dssp TCSEEEECCTT-S---C-------CGGGGTTCSEEEECCCCC-T--------TSCHHHHHHTTTHHHHHHHHHHHH----
T ss_pred CCceEEEcccH-H---H-------HHHHHcCCCEEEECCCCC-C--------CCCccccchhhHHHHHHHHHHHHH----
Confidence 46 78888887 2 1 223446899999999975 2 245888999999999999998843
Q ss_pred cCCCCeEEEeecccccccCCC-CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~-~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
.+ .++||++||..+...... .+...|+.+|++++.+++ ..|+++++++||.+.++..........
T Consensus 121 ~~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~------ 186 (236)
T 3e8x_A 121 RG-IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP------ 186 (236)
T ss_dssp HT-CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES------
T ss_pred cC-CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc------
Confidence 23 589999999776522100 357899999999999876 468999999999999986543221100
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.......+..++ |+|++++++++.. ..+|+++++++|.
T Consensus 187 ~~~~~~~~i~~~-Dva~~~~~~~~~~--~~~g~~~~v~~~~ 224 (236)
T 3e8x_A 187 HFSEITRSITRH-DVAKVIAELVDQQ--HTIGKTFEVLNGD 224 (236)
T ss_dssp SCSCCCCCEEHH-HHHHHHHHHTTCG--GGTTEEEEEEECS
T ss_pred CCCcccCcEeHH-HHHHHHHHHhcCc--cccCCeEEEeCCC
Confidence 111123445555 9999999999754 3789999998884
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.4e-15 Score=118.90 Aligned_cols=180 Identities=12% Similarity=0.049 Sum_probs=125.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|. +++.++++.. ++|+|||+||.... . ...++++..+++|+.++..+++++...
T Consensus 74 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~Vih~A~~~~~-~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-- 139 (346)
T 4egb_A 74 HPNYYFVKGEIQNG--ELLEHVIKER-----DVQVIVNFAAESHV-D----RSIENPIPFYDTNVIGTVTLLELVKKY-- 139 (346)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS--
T ss_pred CCCeEEEEcCCCCH--HHHHHHHhhc-----CCCEEEECCcccch-h----hhhhCHHHHHHHHHHHHHHHHHHHHhc--
Confidence 45899999999999 8888888753 58999999997522 1 245677889999999999999887543
Q ss_pred hcCCCCeEEEeecccccccC----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 88 ESKAGGSIVFLTSIIGAERG----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
+ .++||++||...+... +..+...|+.+|.+.+.+++.++++. |+++++++||.+.++......
T Consensus 140 --~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~ 213 (346)
T 4egb_A 140 --P-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEK 213 (346)
T ss_dssp --T-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTS
T ss_pred --C-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccc
Confidence 2 4789999998765211 11235789999999999999998875 799999999999987654321
Q ss_pred chHHHHHHHHhhcCCCCC---------CCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAPLHRW---------LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~---------~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.............++..+ ... +|+|++++.++.... .|+++++.+|..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s 272 (346)
T 4egb_A 214 LIPLMVTNALEGKKLPLYGDGLNVRDWLHV-TDHCSAIDVVLHKGR---VGEVYNIGGNNEKT 272 (346)
T ss_dssp HHHHHHHHHHTTCCCEEETTSCCEECEEEH-HHHHHHHHHHHHHCC---TTCEEEECCSCCEE
T ss_pred hHHHHHHHHHcCCCceeeCCCCeEEeeEEH-HHHHHHHHHHHhcCC---CCCEEEECCCCcee
Confidence 111222222122222211 223 499999999997543 78999999987543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-15 Score=120.13 Aligned_cols=179 Identities=7% Similarity=-0.064 Sum_probs=128.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|+|||+||..... .+.++++..+++|+.++..+++++.+.
T Consensus 81 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--- 143 (352)
T 1sb8_A 81 SNFKFIQGDIRNL--DDCNNACA-------GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA--- 143 (352)
T ss_dssp TTEEEEECCTTSH--HHHHHHHT-------TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT---
T ss_pred CceEEEECCCCCH--HHHHHHhc-------CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 4688999999998 77777664 699999999974211 234678899999999999999998652
Q ss_pred cCCCCeEEEeecccccccCC---------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--
Q 027744 89 SKAGGSIVFLTSIIGAERGL---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-- 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~---------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-- 157 (219)
+ .++||++||...+.... ..+...|+.+|.+.+.+++.+++++ |+++++++||.+.++......
T Consensus 144 -~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~ 218 (352)
T 1sb8_A 144 -K-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAY 218 (352)
T ss_dssp -T-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTT
T ss_pred -C-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcch
Confidence 2 47999999988762211 0246789999999999999998876 799999999999998754320
Q ss_pred -c-hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 -G-QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 -~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ............+.. .+..++ |+|++++.++.. .....|+++++++|..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~-Dva~a~~~~~~~-~~~~~~~~~ni~~~~~~s 281 (352)
T 1sb8_A 219 AAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE-NTVQANLLAATA-GLDARNQVYNIAVGGRTS 281 (352)
T ss_dssp CCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH-HHHHHHHHHHTC-CGGGCSEEEEESCSCCEE
T ss_pred hhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHH-HHHHHHHHHHhc-cccCCCceEEeCCCCCcc
Confidence 0 111111111222211 233444 999999988864 234578999999887543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.6e-15 Score=117.79 Aligned_cols=171 Identities=12% Similarity=0.087 Sum_probs=115.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++++ ++|+||||||... .. +.++++ +++|+.++.++++++...
T Consensus 65 ~~v~~~~~Dl~d~--~~~~~~~~~~-----~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~~--- 126 (330)
T 2pzm_A 65 AGLSVIEGSVTDA--GLLERAFDSF-----KPTHVVHSAAAYK-DP-----DDWAED--AATNVQGSINVAKAASKA--- 126 (330)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHHH---
T ss_pred CCceEEEeeCCCH--HHHHHHHhhc-----CCCEEEECCccCC-Cc-----cccChh--HHHHHHHHHHHHHHHHHc---
Confidence 4688999999998 8888887764 6999999999752 21 445666 999999999999998742
Q ss_pred cCCCCeEEEeecccccccCCC---C------CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 89 SKAGGSIVFLTSIIGAERGLY---P------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~---~------~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
+ .++||++||...+..... + +...|+.+|++++.+++.+ +++...++|+.+..+........
T Consensus 127 -~-~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~~~~~~~ 197 (330)
T 2pzm_A 127 -G-VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRLAIGPIP 197 (330)
T ss_dssp -T-CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTCCSSHHH
T ss_pred -C-CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCCCCCHHH
Confidence 2 579999999987622111 2 5679999999999999876 34455555555444432111111
Q ss_pred HHHHHHHHhhcC-----CCCCCCCchhHHH-HHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAP-----LHRWLDVKNDLAS-TVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~-----~~~~~~~~~dva~-~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
............ ...+..++ |+|+ +++++++.. . |+++++++|..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~i~~~-Dva~~a~~~~~~~~--~--g~~~~v~~~~~~s 250 (330)
T 2pzm_A 198 TFYKRLKAGQKCFCSDTVRDFLDMS-DFLAIADLSLQEGR--P--TGVFNVSTGEGHS 250 (330)
T ss_dssp HHHHHHHTTCCCCEESCEECEEEHH-HHHHHHHHHTSTTC--C--CEEEEESCSCCEE
T ss_pred HHHHHHHcCCEEeCCCCEecceeHH-HHHHHHHHHHhhcC--C--CCEEEeCCCCCCC
Confidence 111111111111 23345555 9999 999999753 2 8999999987644
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=114.63 Aligned_cols=176 Identities=14% Similarity=0.185 Sum_probs=123.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
..+.++.+|+++. ++.++++ ++|++||+|+... ...+.++++..+++|+.++.++++++..
T Consensus 43 ~~~~~~~~Dl~~~---~~~~~~~-------~~d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~---- 103 (313)
T 3ehe_A 43 EAARLVKADLAAD---DIKDYLK-------GAEEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK---- 103 (313)
T ss_dssp TTEEEECCCTTTS---CCHHHHT-------TCSEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCcEEEECcCChH---HHHHHhc-------CCCEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----
Confidence 4678899999873 4444443 6999999999631 1234566888999999999999988643
Q ss_pred cCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 89 SKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
.+ .++||++||...+.. .+..+...|+.+|.+.+.+++.+++++ |+++++++|+.+.++........
T Consensus 104 ~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~ 179 (313)
T 3ehe_A 104 AG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIY 179 (313)
T ss_dssp HT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHH
T ss_pred cC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHH
Confidence 23 579999999876511 123456789999999999999999886 89999999999998865432212
Q ss_pred HHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...........++ ..+... +|+|++++.++.. ...|+++++.+|..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~---~~~~~~~ni~~~~~~s 236 (313)
T 3ehe_A 180 DFIMKLKRNPEELEILGNGEQNKSYIYI-SDCVDAMLFGLRG---DERVNIFNIGSEDQIK 236 (313)
T ss_dssp HHHHHHHHCTTEEEESTTSCCEECCEEH-HHHHHHHHHHTTC---CSSEEEEECCCSCCEE
T ss_pred HHHHHHHcCCCceEEeCCCCeEEeEEEH-HHHHHHHHHHhcc---CCCCceEEECCCCCee
Confidence 2222222121111 122333 4999999999962 3468999999987644
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.1e-15 Score=112.33 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=105.0
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.++++|++|. +++.++++ ++|++|||||.. |+. ++.+++.|
T Consensus 50 ~~~~~~~~~~D~~d~--~~~~~~~~-------~~d~vv~~ag~~--------------------n~~-----~~~~~~~~ 95 (221)
T 3r6d_A 50 DHERVTVIEGSFQNP--GXLEQAVT-------NAEVVFVGAMES--------------------GSD-----MASIVKAL 95 (221)
T ss_dssp TSTTEEEEECCTTCH--HHHHHHHT-------TCSEEEESCCCC--------------------HHH-----HHHHHHHH
T ss_pred CCCceEEEECCCCCH--HHHHHHHc-------CCCEEEEcCCCC--------------------Chh-----HHHHHHHH
Confidence 356789999999998 88777764 589999999852 221 77888888
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcc----------hhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAA----------AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~----------~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
++.+ .++||++||..++.. .+... .|+.+|.+++.+++. .|++++.|+||++.++.....
T Consensus 96 ~~~~-~~~iv~iSs~~~~~~--~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~ 165 (221)
T 3r6d_A 96 SRXN-IRRVIGVSMAGLSGE--FPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTD 165 (221)
T ss_dssp HHTT-CCEEEEEEETTTTSC--SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCC
T ss_pred HhcC-CCeEEEEeeceecCC--CCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcc
Confidence 8765 689999999887632 23222 899999999988763 589999999999988732221
Q ss_pred cchHHHHHHHHhhcCCC-CCCCCchhHHHHHHHhc--cCCCCcccceEEEecCCc
Q 027744 157 VGQERAVKLVREAAPLH-RWLDVKNDLASTVIYLI--SDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~--s~~~~~~~G~~i~~dgG~ 208 (219)
.... ....+.. .+..++ |+|+++++++ ++...+++ +.+.+.++.
T Consensus 166 ~~~~------~~~~~~~~~~~~~~-dvA~~~~~l~~~~~~~~~~~-~~~~i~~~~ 212 (221)
T 3r6d_A 166 YELI------PEGAQFNDAQVSRE-AVVKAIFDILHAADETPFHR-TSIGVGEPG 212 (221)
T ss_dssp CEEE------CTTSCCCCCEEEHH-HHHHHHHHHHTCSCCGGGTT-EEEEEECTT
T ss_pred eeec------cCCccCCCceeeHH-HHHHHHHHHHHhcChhhhhc-ceeeecCCC
Confidence 1100 0111222 234455 9999999999 87666654 455555443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-15 Score=120.04 Aligned_cols=184 Identities=15% Similarity=0.125 Sum_probs=125.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.+++++ +++|++|||||... .. ...+..+..+++|+.++..+++++ +
T Consensus 54 ~~~~~~~~~Dl~d~--~~~~~~~~~-----~~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~ 117 (341)
T 3enk_A 54 GKTPAFHETDVSDE--RALARIFDA-----HPITAAIHFAALKA-VG----ESVAKPIEYYRNNLDSLLSLLRVM----R 117 (341)
T ss_dssp SCCCEEECCCTTCH--HHHHHHHHH-----SCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHH----H
T ss_pred CCCceEEEeecCCH--HHHHHHHhc-----cCCcEEEECccccc-cC----ccccChHHHHHHHHHHHHHHHHHH----H
Confidence 34788999999999 888888775 47999999999752 11 123445678889999999887765 3
Q ss_pred hcCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc-
Q 027744 88 ESKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV- 157 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~- 157 (219)
+.+ .++||++||...+.. .+..+...|+.+|.+.+.+++.++.++. ++++++++|+.+.++......
T Consensus 118 ~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g 194 (341)
T 3enk_A 118 ERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIG 194 (341)
T ss_dssp HTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCC
T ss_pred hCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccC
Confidence 333 579999999776511 1122447899999999999999998864 599999999998887432100
Q ss_pred -------c--hHHHHHHHHhh-cCCC---------------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 -------G--QERAVKLVREA-APLH---------------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 -------~--~~~~~~~~~~~-~~~~---------------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ........... .++. .+... +|+|++++.++........|+++++++|..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 272 (341)
T 3enk_A 195 EDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV-VDLARGHIAALDALERRDASLTVNLGTGRGYS 272 (341)
T ss_dssp CCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH-HHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE
T ss_pred CCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH-HHHHHHHHHHHHhhhcCCcceEEEeCCCCcee
Confidence 0 11111111111 1111 12223 49999999988642223568999999987654
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.5e-15 Score=120.42 Aligned_cols=175 Identities=13% Similarity=0.119 Sum_probs=122.7
Q ss_pred cceEEE-EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVV-GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.+++++ .+|++|. +++.++++ ++|+|||+||.... . ++++..+++|+.++.++++++.+.
T Consensus 61 ~~~~~~~~~D~~d~--~~~~~~~~-------~~d~vih~A~~~~~-~-------~~~~~~~~~n~~g~~~ll~~~~~~-- 121 (342)
T 1y1p_A 61 GRFETAVVEDMLKQ--GAYDEVIK-------GAAGVAHIASVVSF-S-------NKYDEVVTPAIGGTLNALRAAAAT-- 121 (342)
T ss_dssp TTEEEEECSCTTST--TTTTTTTT-------TCSEEEECCCCCSC-C-------SCHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CceEEEEecCCcCh--HHHHHHHc-------CCCEEEEeCCCCCC-C-------CCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 467888 8999998 77766654 68999999997522 1 246778999999999999988652
Q ss_pred hcCCCCeEEEeecccccccC-C----------------------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCe
Q 027744 88 ESKAGGSIVFLTSIIGAERG-L----------------------------YPGAAAYGACAASIHQLVRTAAMEIGKHKI 138 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~-~----------------------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi 138 (219)
.+ .++||++||..++..+ + ..+...|+.+|.+.+.+++.++++++. ++
T Consensus 122 -~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~ 198 (342)
T 1y1p_A 122 -PS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HF 198 (342)
T ss_dssp -TT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SS
T ss_pred -CC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-Cc
Confidence 12 4799999998765211 0 012368999999999999999999876 89
Q ss_pred EEEEeecCCccCCCCccccc----hHHHHHHHH-------hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 139 RVNGIARGLHLQDEYPIAVG----QERAVKLVR-------EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 139 ~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
++++++||.+.++....... ......... ...+.+.+..++ |+|++++.++.. ...+|+.+..+|+
T Consensus 199 ~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~--~~~~g~~~~~~g~ 275 (342)
T 1y1p_A 199 TLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp EEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred eEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHH-HHHHHHHHHHcC--cccCCceEEEeCC
Confidence 99999999999987653211 111111110 001223345555 999999998864 3456877666665
Q ss_pred c
Q 027744 208 Q 208 (219)
Q Consensus 208 ~ 208 (219)
.
T Consensus 276 ~ 276 (342)
T 1y1p_A 276 T 276 (342)
T ss_dssp E
T ss_pred C
Confidence 3
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-15 Score=116.78 Aligned_cols=176 Identities=13% Similarity=0.064 Sum_probs=123.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.+++++. ++|++||+|+.... ..+.++++..+++|+.++.++++++.. .
T Consensus 44 ~~~~~~~Dl~~~--~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~ 107 (311)
T 2p5y_A 44 GVPFFRVDLRDK--EGVERAFREF-----RPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQ----Y 107 (311)
T ss_dssp TCCEECCCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T
T ss_pred CeEEEECCCCCH--HHHHHHHHhc-----CCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----h
Confidence 567899999998 8888777642 68999999997421 134567888999999999999998753 2
Q ss_pred CCCCeEEEeecc-ccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 90 KAGGSIVFLTSI-IGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 90 ~~~g~iv~iss~-~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ .++||++||. ..+.. .+..+...|+.+|++++.+++.+++++ |+++++++||.+.++.......
T Consensus 108 ~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~ 183 (311)
T 2p5y_A 108 G-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGE 183 (311)
T ss_dssp T-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSST
T ss_pred C-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCc
Confidence 2 4799999997 32210 011246789999999999999998875 7999999999999986543211
Q ss_pred hHH---HHHHHHhhcCC--------------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QER---AVKLVREAAPL--------------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~---~~~~~~~~~~~--------------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... .........+. ..+..++ |+|+++++++... |+++++++|..++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~-----~~~~~i~~~~~~s 247 (311)
T 2p5y_A 184 AGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG-DVAEAHALALFSL-----EGIYNVGTGEGHT 247 (311)
T ss_dssp THHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH-HHHHHHHHHHHHC-----CEEEEESCSCCEE
T ss_pred CcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH-HHHHHHHHHHhCC-----CCEEEeCCCCCcc
Confidence 111 11111122221 1223344 9999999988642 8999999987543
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-14 Score=116.91 Aligned_cols=179 Identities=14% Similarity=0.073 Sum_probs=124.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++.. ++|+|||+||..... ....+++++...+++|+.++.++++++.+.
T Consensus 76 ~~~v~~~~~Dl~d~--~~~~~~~~~~-----~~D~Vih~A~~~~~~--~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-- 144 (404)
T 1i24_A 76 GKSIELYVGDICDF--EFLAESFKSF-----EPDSVVHFGEQRSAP--YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-- 144 (404)
T ss_dssp CCCCEEEESCTTSH--HHHHHHHHHH-----CCSEEEECCSCCCHH--HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCceEEEECCCCCH--HHHHHHHhcc-----CCCEEEECCCCCCcc--chhhCccchhhhHHHHHHHHHHHHHHHHHh--
Confidence 34688999999998 8888887764 599999999974211 112256778889999999999999998653
Q ss_pred hcCCCCeEEEeeccccccc----------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 027744 88 ESKAGGSIVFLTSIIGAER----------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~----------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~p 145 (219)
+..++||++||...+.. .+..+...|+.+|.+.+.+++.+++++ |+++++++|
T Consensus 145 --~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp 219 (404)
T 1i24_A 145 --GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQ 219 (404)
T ss_dssp --CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE
T ss_pred --CCCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEec
Confidence 21258999999865421 023346789999999999999998876 899999999
Q ss_pred CCccCCCCccc------------------cchHHHHHHHHhhcCC---C------CCCCCchhHHHHHHHhccCCCCccc
Q 027744 146 GLHLQDEYPIA------------------VGQERAVKLVREAAPL---H------RWLDVKNDLASTVIYLISDGSRYMT 198 (219)
Q Consensus 146 G~v~t~~~~~~------------------~~~~~~~~~~~~~~~~---~------~~~~~~~dva~~~~~l~s~~~~~~~ 198 (219)
|.+.++..... .......... ...+. + .+... +|+|++++.++.... ..
T Consensus 220 ~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v-~Dva~a~~~~l~~~~--~~ 295 (404)
T 1i24_A 220 GVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAA-VGHPLTVYGKGGQTRGYLDI-RDTVQCVEIAIANPA--KA 295 (404)
T ss_dssp CEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHH-HTCCEEEETTSCCEEEEEEH-HHHHHHHHHHHHSCC--CT
T ss_pred ceeeCCCCCccccccccccccccccchhhHHHHHHHHHH-cCCeeEEeCCCCceECcEEH-HHHHHHHHHHHhCcc--cC
Confidence 99998864310 0111111111 22221 1 12233 499999999886432 24
Q ss_pred c--eEEEecC
Q 027744 199 G--TTIYVDG 206 (219)
Q Consensus 199 G--~~i~~dg 206 (219)
| +++++.+
T Consensus 296 g~~~~yni~~ 305 (404)
T 1i24_A 296 GEFRVFNQFT 305 (404)
T ss_dssp TCEEEEEECS
T ss_pred CCceEEEECC
Confidence 6 7888865
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-15 Score=119.95 Aligned_cols=179 Identities=16% Similarity=0.147 Sum_probs=126.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|. + +.++++ . |++||+|+... ...+.++++..+++|+.++.++++++...
T Consensus 42 ~~~~~~~~~Dl~d~--~-~~~~~~-------~-d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-- 103 (312)
T 3ko8_A 42 NPSAELHVRDLKDY--S-WGAGIK-------G-DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT-- 103 (312)
T ss_dssp CTTSEEECCCTTST--T-TTTTCC-------C-SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCceEEECccccH--H-HHhhcC-------C-CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc--
Confidence 35688999999998 5 544432 3 99999999631 12455667889999999999999988542
Q ss_pred hcCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ .++||++||...+.. .+..+...|+.+|.+.+.+++.+++++ |+++++++||.+.++.......
T Consensus 104 --~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~ 177 (312)
T 3ko8_A 104 --G-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVI 177 (312)
T ss_dssp --T-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHH
T ss_pred --C-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChH
Confidence 2 479999999876521 112456889999999999999999987 8999999999999987553222
Q ss_pred hHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 211 (219)
............++ ..+...+ |+|++++.++.. ......|+++++.+|..++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s 239 (312)
T 3ko8_A 178 YDFIMKLRRNPNVLEVLGDGTQRKSYLYVR-DAVEATLAAWKKFEEMDAPFLALNVGNVDAVR 239 (312)
T ss_dssp HHHHHHHHHCTTEEEEC----CEECEEEHH-HHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred HHHHHHHHhCCCCeEEcCCCCeEEeeEEHH-HHHHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence 22222222111111 1123344 999999999864 1124578999999987644
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-15 Score=120.69 Aligned_cols=169 Identities=15% Similarity=0.161 Sum_probs=124.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|+|||+||.... + .........+++|+.++.++++++.+.
T Consensus 70 ~~v~~~~~Dl~d~--~~l~~~~~-------~~D~Vih~Aa~~~~--~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~--- 132 (344)
T 2gn4_A 70 PRMRFFIGDVRDL--ERLNYALE-------GVDICIHAAALKHV--P---IAEYNPLECIKTNIMGASNVINACLKN--- 132 (344)
T ss_dssp TTEEEEECCTTCH--HHHHHHTT-------TCSEEEECCCCCCH--H---HHHHSHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred CCEEEEECCCCCH--HHHHHHHh-------cCCEEEECCCCCCC--C---chhcCHHHHHHHHHHHHHHHHHHHHhC---
Confidence 5789999999998 77776653 68999999997521 1 122345688999999999999999764
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
+ .++||++||..+. .+...|+.+|++.+.+++.+++++++.|+++++++||.+.++..... +........
T Consensus 133 -~-v~~~V~~SS~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i---~~~~~~~~~ 202 (344)
T 2gn4_A 133 -A-ISQVIALSTDKAA-----NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV---PFFKKLVQN 202 (344)
T ss_dssp -T-CSEEEEECCGGGS-----SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH---HHHHHHHHH
T ss_pred -C-CCEEEEecCCccC-----CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH---HHHHHHHHc
Confidence 2 4799999997654 34579999999999999999998888899999999999998764311 111111111
Q ss_pred hc---CC------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 169 AA---PL------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 169 ~~---~~------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.. +. +.+..++ |+|++++.++... ..|++++++++.
T Consensus 203 g~~~~~i~~~~~~r~~i~v~-D~a~~v~~~l~~~---~~g~~~~~~~~~ 247 (344)
T 2gn4_A 203 KASEIPITDIRMTRFWITLD-EGVSFVLKSLKRM---HGGEIFVPKIPS 247 (344)
T ss_dssp TCCCEEESCTTCEEEEECHH-HHHHHHHHHHHHC---CSSCEEEECCCE
T ss_pred CCCceEEeCCCeEEeeEEHH-HHHHHHHHHHhhc---cCCCEEecCCCc
Confidence 11 11 1134445 9999999998653 368888887763
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.2e-14 Score=114.21 Aligned_cols=183 Identities=11% Similarity=0.081 Sum_probs=127.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.++++.+ ++|+|||+||.. . ...+.++++..+++|+.++..+++++.+.
T Consensus 56 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~-~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-- 121 (357)
T 1rkx_A 56 ADGMQSEIGDIRDQ--NKLLESIREF-----QPEIVFHMAAQP-L----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-- 121 (357)
T ss_dssp TTTSEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCC-C----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH--
T ss_pred CCceEEEEccccCH--HHHHHHHHhc-----CCCEEEECCCCc-c----cccchhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence 45788999999998 8888887765 699999999963 1 12345678899999999999999998763
Q ss_pred hcCCCCeEEEeeccccccc----------CCCCCcchhHHhHHHHHHHHHHHHHHhC------CCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAER----------GLYPGAAAYGACAASIHQLVRTAAMEIG------KHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~------~~gi~v~~i~pG~v~t~ 151 (219)
+..++||++||...+.. .+..+...|+.+|.+.+.+++.++.++. +.|+++++++||.+.++
T Consensus 122 --~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~ 199 (357)
T 1rkx_A 122 --GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG 199 (357)
T ss_dssp --CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred --CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCC
Confidence 11479999999864311 0134567899999999999999999885 45899999999999998
Q ss_pred CCccccc-hHHHHHHHHhhcC--C------CCCCCCchhHHHHHHHhccCC--CCcccceEEEecCC
Q 027744 152 EYPIAVG-QERAVKLVREAAP--L------HRWLDVKNDLASTVIYLISDG--SRYMTGTTIYVDGA 207 (219)
Q Consensus 152 ~~~~~~~-~~~~~~~~~~~~~--~------~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgG 207 (219)
....... ............+ + ..+...+ |+|++++.++... .....|+++++.+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~-Dva~a~~~~~~~~~~~~~~~~~~~ni~~~ 265 (357)
T 1rkx_A 200 GDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVL-EPLSGYLLLAQKLYTDGAEYAEGWNFGPN 265 (357)
T ss_dssp TCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETH-HHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred CCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHH-HHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence 6432100 1111111111111 1 1233444 9999999887521 11235788999875
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.3e-15 Score=112.11 Aligned_cols=153 Identities=14% Similarity=0.184 Sum_probs=115.2
Q ss_pred cceEEEEecCCc-cchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEE-DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++++|++| . +++.++++ ++|++|||||... . ..+++|+.++..+++++.
T Consensus 41 ~~~~~~~~D~~d~~--~~~~~~~~-------~~d~vi~~ag~~~-~------------~~~~~n~~~~~~l~~a~~---- 94 (219)
T 3dqp_A 41 NNVKAVHFDVDWTP--EEMAKQLH-------GMDAIINVSGSGG-K------------SLLKVDLYGAVKLMQAAE---- 94 (219)
T ss_dssp TTEEEEECCTTSCH--HHHHTTTT-------TCSEEEECCCCTT-S------------SCCCCCCHHHHHHHHHHH----
T ss_pred CCceEEEecccCCH--HHHHHHHc-------CCCEEEECCcCCC-C------------CcEeEeHHHHHHHHHHHH----
Confidence 578999999999 7 67666654 6999999999852 1 157889999998888873
Q ss_pred hcCCCCeEEEeecccccccCCCCC-------cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPG-------AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~-------~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
+.+ .++||++||..+... .+. ...|+.+|.+.+.+++ ...|+++++++||.+.++........
T Consensus 95 ~~~-~~~iv~~SS~~~~~~--~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~- 164 (219)
T 3dqp_A 95 KAE-VKRFILLSTIFSLQP--EKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI- 164 (219)
T ss_dssp HTT-CCEEEEECCTTTTCG--GGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-
T ss_pred HhC-CCEEEEECcccccCC--CcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-
Confidence 333 479999999887632 233 6789999999999887 35689999999999998755433221
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
......+..++ |+|+++++++... ...|+++++++|.
T Consensus 165 --------~~~~~~~i~~~-Dva~~i~~~l~~~--~~~g~~~~i~~g~ 201 (219)
T 3dqp_A 165 --------NDEVSASNTIG-DVADTIKELVMTD--HSIGKVISMHNGK 201 (219)
T ss_dssp --------SSSCCCCEEHH-HHHHHHHHHHTCG--GGTTEEEEEEECS
T ss_pred --------CCCcCCcccHH-HHHHHHHHHHhCc--cccCcEEEeCCCC
Confidence 12333445565 9999999999753 3569999998775
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.59 E-value=3.1e-15 Score=119.93 Aligned_cols=191 Identities=13% Similarity=0.047 Sum_probs=131.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC------------CC--------------------
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM------------QD-------------------- 55 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~------------~~-------------------- 55 (219)
|.++..+.||+++. ++++++++++.+++|++|+||||++..... ++
T Consensus 111 G~~a~~i~~Dv~d~--e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~ 188 (401)
T 4ggo_A 111 GLYSVTIDGDAFSD--EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEI 188 (401)
T ss_dssp TCCEEEEESCTTSH--HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEE
T ss_pred CCCceeEeCCCCCH--HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccc
Confidence 66889999999999 999999999999999999999999964210 11
Q ss_pred -CCCcCHHHHHHHHHh---hhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHH
Q 027744 56 -PLQVGEDEFKKLVKI---NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 131 (219)
Q Consensus 56 -~~~~~~~~~~~~~~~---n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~ 131 (219)
+...+.++++....+ ..+..+...+...+.|.+ +++++.+|+..+...-|....+.++++|++|+..++.|+.
T Consensus 189 ~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~ 265 (401)
T 4ggo_A 189 SAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNK 265 (401)
T ss_dssp EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHH
Confidence 112345555555544 444555555555555543 6899999998775332122345889999999999999999
Q ss_pred HhCCCCeEEEEeecCCccCCCCccccchHHHH-HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 132 EIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 132 e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
++++ ++++++.+|.+.|......+.-+... ..++-+ +..++-+ .+.+.+..|..+.- +-++..+.+|....+
T Consensus 266 eL~~--~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvm---k~~g~he-g~ieq~~rl~~~~l-y~~~~~~~~D~~~r~ 338 (401)
T 4ggo_A 266 ENPS--IRAFVSVNKGLVTRASAVIPVIPLYLASLFKVM---KEKGNHE-GCIEQITRLYAERL-YRKDGTIPVDEENRI 338 (401)
T ss_dssp HCTT--EEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHH---HHHTCCC-CHHHHHHHHHHHTT-SCTTCCCCCCTTSCE
T ss_pred hcCC--CcEEEEEcCccccchhhcCCCchHHHHHHHHHH---HhcCCCC-chHHHHHHHHHHhh-ccCCCCCCcCCCCCc
Confidence 9975 89999999999999887765533322 222121 2223334 88999999886522 222333556764443
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=116.14 Aligned_cols=168 Identities=13% Similarity=0.136 Sum_probs=115.3
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|. +++.++++ ++|+|||+||... ...++++..+++|+.++.++++++.+.
T Consensus 57 ~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~---- 116 (342)
T 2x4g_A 57 EPECRVAEMLDH--AGLERALR-------GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA---- 116 (342)
T ss_dssp CCEEEECCTTCH--HHHHHHTT-------TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH----
T ss_pred CeEEEEecCCCH--HHHHHHHc-------CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc----
Confidence 678999999998 77766654 5899999999742 234577888999999999999998764
Q ss_pred CCCCeEEEeecccccccCCC----------CC----cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC-c
Q 027744 90 KAGGSIVFLTSIIGAERGLY----------PG----AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY-P 154 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~----------~~----~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~-~ 154 (219)
+ .++||++||...+..... .+ ...|+.+|.+.+.+++.+++ . |+++++++||.+.++.. .
T Consensus 117 ~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~ 191 (342)
T 2x4g_A 117 R-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIG 191 (342)
T ss_dssp T-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSS
T ss_pred C-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcc
Confidence 2 478999999887622111 11 67899999999999999886 3 79999999999999865 2
Q ss_pred cccchHHHHHHHHhhcCC----C--CCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 155 IAVGQERAVKLVREAAPL----H--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~----~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.. ......... ...+. . .+..++ |+|++++.++.... .|+++++++|.
T Consensus 192 ~~-~~~~~~~~~-~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~~---~g~~~~v~~~~ 245 (342)
T 2x4g_A 192 PT-TGRVITAIG-NGEMTHYVAGQRNVIDAA-EAGRGLLMALERGR---IGERYLLTGHN 245 (342)
T ss_dssp CS-TTHHHHHHH-TTCCCEEECCEEEEEEHH-HHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred cc-HHHHHHHHH-cCCCccccCCCcceeeHH-HHHHHHHHHHhCCC---CCceEEEcCCc
Confidence 11 112222222 22111 1 133455 99999999997543 28999999987
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-14 Score=116.01 Aligned_cols=173 Identities=12% Similarity=0.037 Sum_probs=119.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. ++++.+ ...++|+|||+||... .+.++++..+++|+.++.++++++..
T Consensus 67 ~~~~~~~~~Dl~d~--~~~~~~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~--- 128 (362)
T 3sxp_A 67 GFKGEVIAADINNP--LDLRRL------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIARS--- 128 (362)
T ss_dssp TCCSEEEECCTTCH--HHHHHH------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHHH---
T ss_pred ccCceEEECCCCCH--HHHHHh------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHHH---
Confidence 34678999999998 777765 2357999999999642 13456789999999999999998843
Q ss_pred hcCCCCeEEEeecccccccC--------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-
Q 027744 88 ESKAGGSIVFLTSIIGAERG--------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~--------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~- 158 (219)
. +++||++||...+... +..+...|+.+|.+.+.+++.++.+ +++..++|+.+.++.......
T Consensus 129 -~--~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~ 200 (362)
T 3sxp_A 129 -K--KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKT 200 (362)
T ss_dssp -T--TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGG
T ss_pred -c--CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcc
Confidence 2 3569999997654211 1123457999999999999987765 778889998888776543211
Q ss_pred ---hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 ---QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ---~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
............+.. .+..++ |+|+++++++... .+| ++++++|..++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~-Dva~ai~~~~~~~---~~g-~~~i~~~~~~s 260 (362)
T 3sxp_A 201 ASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIE-DVIQANVKAMKAQ---KSG-VYNVGYSQARS 260 (362)
T ss_dssp SCHHHHHHHHHHTTSEEECSGGGCCEEECEEHH-HHHHHHHHHTTCS---SCE-EEEESCSCEEE
T ss_pred hhHHHHHHHHHHhCCCeEEECCCCeEEccEEHH-HHHHHHHHHHhcC---CCC-EEEeCCCCCcc
Confidence 111111111222211 123344 9999999999754 357 99999887543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.5e-14 Score=113.11 Aligned_cols=181 Identities=9% Similarity=-0.035 Sum_probs=123.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++.+ ++|+|||+||.... ..+.++++..+++|+.++..+++++.+...++
T Consensus 84 ~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~ 151 (381)
T 1n7h_A 84 LMKLHYADLTDA--SSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDS 151 (381)
T ss_dssp CEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCH--HHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 788999999998 8888887765 68999999997521 13356788999999999999999999987654
Q ss_pred CCCCeEEEeecccccccC--------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH-
Q 027744 90 KAGGSIVFLTSIIGAERG--------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE- 160 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~--------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~- 160 (219)
++.++||++||...+... +..+...|+.+|.+.+.+++.++.++ ++.+..++|..+..+.........
T Consensus 152 ~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~ 228 (381)
T 1n7h_A 152 GRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRK 228 (381)
T ss_dssp CCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHH
T ss_pred CCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHH
Confidence 335799999998764210 23456789999999999999998876 455555555444443322111111
Q ss_pred ---HHHHHHHhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 ---RAVKLVREAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ---~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..........+ ...+...+ |+|++++.++.... ++++++.+|..+
T Consensus 229 ~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~ 285 (381)
T 1n7h_A 229 ITRALGRIKVGLQTKLFLGNLQASRDWGFAG-DYVEAMWLMLQQEK----PDDYVVATEEGH 285 (381)
T ss_dssp HHHHHHHHHHTSCCCEEESCTTCEEECEEHH-HHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred HHHHHHHHHcCCCCeEEeCCCCceeeeEEHH-HHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence 11111111111 11234444 99999999996532 478999888654
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.8e-14 Score=118.07 Aligned_cols=171 Identities=11% Similarity=-0.000 Sum_probs=117.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++. .++++|+||||||... ..++++..+++|+.++..+++++.+
T Consensus 130 ~~v~~v~~Dl~d~--~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---- 187 (427)
T 4f6c_A 130 SNIEVIVGDFECM--DDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---- 187 (427)
T ss_dssp TTEEEEEECC-----CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH----
T ss_pred CceEEEeCCCCCc--ccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh----
Confidence 5789999999997 6666 4578999999999752 2356788999999999999999876
Q ss_pred cCCCCeEEEeecccc--ccc-----------C---CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 89 SKAGGSIVFLTSIIG--AER-----------G---LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 89 ~~~~g~iv~iss~~~--~~~-----------~---~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
+ .++||++||..+ ... . +..+...|+.+|.+.+.+++.+++ .|+++++++||.+.++.
T Consensus 188 -~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~ 261 (427)
T 4f6c_A 188 -H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPY 261 (427)
T ss_dssp -T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCS
T ss_pred -c-CCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCC
Confidence 2 579999999876 000 0 012678999999999999998764 58999999999999886
Q ss_pred Cccccch-------HHHHHHHHhhc--C------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 153 YPIAVGQ-------ERAVKLVREAA--P------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 153 ~~~~~~~-------~~~~~~~~~~~--~------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....... ........... + ...+...+ |+|++++.++.... .|+++++++|..+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~-DvA~ai~~~~~~~~---~g~~~~l~~~~~~s 331 (427)
T 4f6c_A 262 NGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD-TTARQIVALAQVNT---PQIIYHVLSPNKMP 331 (427)
T ss_dssp SSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH-HHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred CCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH-HHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence 5543110 01111111111 1 11233444 99999999997543 78999999987654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.8e-14 Score=112.44 Aligned_cols=170 Identities=11% Similarity=0.045 Sum_probs=116.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++. +++|+|||+||.... . +.++++ +++|+.++..+++++.+.
T Consensus 66 ~~~~~~~~Dl~d~--~~~~~~~~~-----~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~--- 127 (333)
T 2q1w_A 66 PNLTFVEGSIADH--ALVNQLIGD-----LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKKN--- 127 (333)
T ss_dssp TTEEEEECCTTCH--HHHHHHHHH-----HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHT---
T ss_pred CCceEEEEeCCCH--HHHHHHHhc-----cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHHh---
Confidence 4688999999998 888887765 369999999997522 1 334555 999999999999998762
Q ss_pred cCCCCeEEEeeccccccc---CCC-------CCc-chhHHhHHHHHHHHHH-HHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 89 SKAGGSIVFLTSIIGAER---GLY-------PGA-AAYGACAASIHQLVRT-AAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---~~~-------~~~-~~y~~sK~a~~~l~~~-l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
+ .++||++||...+.. ... .+. ..|+.+|.+.+.+++. ++ ++..++|+.+.++.....
T Consensus 128 -~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~ 197 (333)
T 2q1w_A 128 -N-VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSG 197 (333)
T ss_dssp -T-CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSS
T ss_pred -C-CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCc
Confidence 2 479999999877520 111 234 7899999999999987 54 567888887777652111
Q ss_pred cchHHHHHHHHhh-----cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 VGQERAVKLVREA-----APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
............. .+...+..++ |+|++++++++... |+++++++|..+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~----g~~~~v~~~~~~s 252 (333)
T 2q1w_A 198 PLPIFFQRLSEGKKCFVTKARRDFVFVK-DLARATVRAVDGVG----HGAYHFSSGTDVA 252 (333)
T ss_dssp HHHHHHHHHHTTCCCEEEECEECEEEHH-HHHHHHHHHHTTCC----CEEEECSCSCCEE
T ss_pred HHHHHHHHHHcCCeeeCCCceEeeEEHH-HHHHHHHHHHhcCC----CCEEEeCCCCCcc
Confidence 1111111111111 1122344555 99999999997543 8999999987644
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.6e-15 Score=143.63 Aligned_cols=128 Identities=15% Similarity=0.146 Sum_probs=97.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.||++|. ++++++++++. ++|++|++|||||+. ...++.+++.++|++.+++|+.|++++.+.+.+.|.
T Consensus 1936 g~~v~~~~~Dvsd~--~~v~~~~~~~~-~~g~id~lVnnAgv~-~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~ 2011 (2512)
T 2vz8_A 1936 GVQVLVSTSNASSL--DGARSLITEAT-QLGPVGGVFNLAMVL-RDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACP 2011 (2512)
T ss_dssp TCEEEEECCCSSSH--HHHHHHHHHHH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCT
T ss_pred CCEEEEEecCCCCH--HHHHHHHHHHH-hcCCCcEEEECCCcC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 56789999999999 99999999987 479999999999986 567889999999999999999999999999999886
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
+ .|+||++||.++. .+ .+++..|+++|+++.+|++..+.+ |+...++..|.+
T Consensus 2012 ~---~g~iV~iSS~ag~-~g-~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2012 E---LDYFVIFSSVSCG-RG-NAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp T---CCEEEEECCHHHH-TT-CTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred c---CCEEEEecchhhc-CC-CCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 4 4899999999987 34 588899999999999999987765 666666666543
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=4.3e-14 Score=115.12 Aligned_cols=177 Identities=11% Similarity=0.036 Sum_probs=121.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|. +++.++++ ++|+|||+||.... ..+.++++..+++|+.++..+++++.
T Consensus 77 ~~~v~~~~~Dl~d~--~~l~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~---- 138 (377)
T 2q1s_A 77 HPAVRFSETSITDD--ALLASLQD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLK---- 138 (377)
T ss_dssp CTTEEEECSCTTCH--HHHHHCCS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHT----
T ss_pred CCceEEEECCCCCH--HHHHHHhh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----
Confidence 45788999999998 76665543 69999999997421 12345678899999999999998874
Q ss_pred hcCCCCeEEEeecccccc-----------cC---CC-CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 88 ESKAGGSIVFLTSIIGAE-----------RG---LY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~-----------~~---~~-~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
+.+..++||++||...+. .. +. .+...|+.+|.+.+.+++.++++. |+++++++||.+.++.
T Consensus 139 ~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~ 215 (377)
T 2q1s_A 139 HFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPG 215 (377)
T ss_dssp TCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred HhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence 221146999999976431 11 12 456789999999999999998875 7999999999999886
Q ss_pred C---------cc----ccchHHHHHHHHhhcCCCC---------CCCCchhHHHH-HHHhccCCCCcccceEEEecCCcc
Q 027744 153 Y---------PI----AVGQERAVKLVREAAPLHR---------WLDVKNDLAST-VIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 153 ~---------~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~-~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
. .. ...............+... +... +|+|++ ++.++.... +| ++++++|..
T Consensus 216 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v-~Dva~a~i~~~~~~~~---~g-~~~i~~~~~ 290 (377)
T 2q1s_A 216 EILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV-EDVANGLIACAADGTP---GG-VYNIASGKE 290 (377)
T ss_dssp CCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH-HHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred CcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH-HHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence 5 21 0001111111212222221 2223 499999 999886532 68 999998865
Q ss_pred c
Q 027744 210 I 210 (219)
Q Consensus 210 ~ 210 (219)
+
T Consensus 291 ~ 291 (377)
T 2q1s_A 291 T 291 (377)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=116.80 Aligned_cols=179 Identities=8% Similarity=0.006 Sum_probs=122.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++.+ ++|+|||+||.... ..+.++++..+++|+.++.++++++...
T Consensus 52 ~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--- 116 (345)
T 2z1m_A 52 NDVKIIHMDLLEF--SNIIRTIEKV-----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV--- 116 (345)
T ss_dssp TTEEECCCCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---
T ss_pred CceeEEECCCCCH--HHHHHHHHhc-----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---
Confidence 4688999999998 8888888765 69999999997421 1234568899999999999999999852
Q ss_pred cCCCCeEEEeecccccc---------cCCCCCcchhHHhHHHHHHHHHHHHHHhC---CCCeEEEEeecCCccCCCCccc
Q 027744 89 SKAGGSIVFLTSIIGAE---------RGLYPGAAAYGACAASIHQLVRTAAMEIG---KHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~---------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~---~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
+..++||++||...+. ..+..+...|+.+|.+.+.+++.++.+++ ..++.++.+.||...+.+....
T Consensus 117 -~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~ 195 (345)
T 2z1m_A 117 -KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKI 195 (345)
T ss_dssp -CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH
T ss_pred -CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHH
Confidence 1137999999986531 11234567899999999999999999875 3345566777887665432211
Q ss_pred cchHHHHHHHHhhc--------CC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 157 VGQERAVKLVREAA--------PL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 157 ~~~~~~~~~~~~~~--------~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
............ +. ..+..++ |+|++++++++... ++++++.+|..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-Dva~a~~~~~~~~~----~~~~~i~~~~~~ 251 (345)
T 2z1m_A 196 --TYSLARIKYGLQDKLVLGNLNAKRDWGYAP-EYVEAMWLMMQQPE----PDDYVIATGETH 251 (345)
T ss_dssp --HHHHHHHHTTSCSCEEESCTTCEECCEEHH-HHHHHHHHHHTSSS----CCCEEECCSCCE
T ss_pred --HHHHHHHHcCCCCeeeeCCCCceeeeEEHH-HHHHHHHHHHhCCC----CceEEEeCCCCc
Confidence 001111111100 01 1244555 99999999997532 467888777644
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.9e-14 Score=108.80 Aligned_cols=150 Identities=13% Similarity=0.058 Sum_probs=100.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. ++++++++ ++|+||||+|.. .. ...++.+++.|++
T Consensus 67 ~~~~~~~~Dl~d~--~~~~~~~~-------~~D~vv~~a~~~---------~~--------------~~~~~~~~~~~~~ 114 (236)
T 3qvo_A 67 TNSQIIMGDVLNH--AALKQAMQ-------GQDIVYANLTGE---------DL--------------DIQANSVIAAMKA 114 (236)
T ss_dssp TTEEEEECCTTCH--HHHHHHHT-------TCSEEEEECCST---------TH--------------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCH--HHHHHHhc-------CCCEEEEcCCCC---------ch--------------hHHHHHHHHHHHH
Confidence 4789999999998 88877765 589999999852 11 1335677888887
Q ss_pred cCCCCeEEEeecccccccCCCC-----------CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 89 SKAGGSIVFLTSIIGAERGLYP-----------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~-----------~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+ .++||++||..++...+.. +...|..+| ..+.+.|+++++|+||++.++......
T Consensus 115 ~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~ 182 (236)
T 3qvo_A 115 CD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYE 182 (236)
T ss_dssp TT-CCEEEEECCCCC----------------CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCE
T ss_pred cC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceE
Confidence 65 6899999998876221110 012233322 223467999999999999887543221
Q ss_pred chHHHHHHHHhhcC-CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAP-LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... ...+ .+++..++ |+|+++++++++...++ |+.+.++++....
T Consensus 183 ~~~-------~~~~~~~~~i~~~-DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~ 228 (236)
T 3qvo_A 183 LTS-------RNEPFKGTIVSRK-SVAALITDIIDKPEKHI-GENIGINQPGTDG 228 (236)
T ss_dssp EEC-------TTSCCSCSEEEHH-HHHHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred Eec-------cCCCCCCcEECHH-HHHHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence 100 1122 24556666 99999999999876554 8999999887655
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=110.92 Aligned_cols=179 Identities=8% Similarity=-0.038 Sum_probs=126.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|+|||+||.... ....+++...+++|+.++..+++++...
T Consensus 79 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--- 141 (351)
T 3ruf_A 79 SRFCFIEGDIRDL--TTCEQVMK-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA--- 141 (351)
T ss_dssp TTEEEEECCTTCH--HHHHHHTT-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---
T ss_pred CceEEEEccCCCH--HHHHHHhc-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc---
Confidence 5789999999998 77776654 69999999997421 1344567788999999999999987542
Q ss_pred cCCCCeEEEeecccccccCC---------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-
Q 027744 89 SKAGGSIVFLTSIIGAERGL---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG- 158 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~---------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~- 158 (219)
+ .++||++||...+.... ..+...|+.+|.+.+.+++.++++. |+++++++|+.+.++.......
T Consensus 142 -~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~ 216 (351)
T 3ruf_A 142 -Q-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAY 216 (351)
T ss_dssp -T-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTT
T ss_pred -C-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcch
Confidence 2 46999999987762211 1235789999999999999998876 7999999999999876543211
Q ss_pred ---hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 ---QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ---~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
-...........+.. .+... +|+|++++.++... ....|+++++.+|..++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v-~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s 279 (351)
T 3ruf_A 217 AAVIPKWTAAMLKGDDVYINGDGETSRDFCYI-DNVIQMNILSALAK-DSAKDNIYNVAVGDRTT 279 (351)
T ss_dssp CCHHHHHHHHHHHTCCCEEESSSCCEECCEEH-HHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE
T ss_pred hhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEH-HHHHHHHHHHHhhc-cccCCCEEEeCCCCccc
Confidence 111111121222221 12233 49999999888542 34679999999887544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.3e-13 Score=112.44 Aligned_cols=175 Identities=8% Similarity=-0.025 Sum_probs=123.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|+|||+||.... . ....++++..+++|+.++.++++++.. .
T Consensus 73 ~v~~~~~Dl~d~--~~~~~~~~-------~~d~Vih~A~~~~~-~---~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~ 135 (379)
T 2c5a_A 73 CDEFHLVDLRVM--ENCLKVTE-------GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARI----N 135 (379)
T ss_dssp CSEEEECCTTSH--HHHHHHHT-------TCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----T
T ss_pred CceEEECCCCCH--HHHHHHhC-------CCCEEEECceecCc-c---cccccCHHHHHHHHHHHHHHHHHHHHH----c
Confidence 678999999998 77777663 68999999997421 1 111345788899999999999998853 2
Q ss_pred CCCCeEEEeecccccccC----------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 90 KAGGSIVFLTSIIGAERG----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~----------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+ .++||++||...+... +..+...|+.+|.+.+.+++.++++. |+++++++||.+.++..
T Consensus 136 ~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~ 211 (379)
T 2c5a_A 136 G-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG 211 (379)
T ss_dssp T-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred C-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence 2 4699999998764210 23456789999999999999998875 79999999999999865
Q ss_pred cccc-----chHHHHHHHHhhcC-C---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 154 PIAV-----GQERAVKLVREAAP-L---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 154 ~~~~-----~~~~~~~~~~~~~~-~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.... ......... ...+ + ..+...+ |+|++++.++... .|+++++.+|..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~----~~~~~ni~~~~~~s 278 (379)
T 2c5a_A 212 TWKGGREKAPAAFCRKAQ-TSTDRFEMWGDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVS 278 (379)
T ss_dssp CCSSSCCCHHHHHHHHHH-HCSSCEEEESCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred CcccccccHHHHHHHHHH-hCCCceEEeCCCCeeEEEEEHH-HHHHHHHHHhhcc----CCCeEEeCCCCccC
Confidence 4211 111111111 1111 1 1223344 9999999998643 47889999886543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=110.95 Aligned_cols=176 Identities=15% Similarity=0.155 Sum_probs=122.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+|+... .+..+++..+++|+.++..+++++..
T Consensus 56 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~---- 115 (347)
T 4id9_A 56 TGGEEVVGSLEDG--QALSDAIM-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA---- 115 (347)
T ss_dssp SCCSEEESCTTCH--HHHHHHHT-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----
T ss_pred CCccEEecCcCCH--HHHHHHHh-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 4678899999998 77776654 6899999999752 23455689999999999999998754
Q ss_pred cCCCCeEEEeeccccccc-----------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc--------
Q 027744 89 SKAGGSIVFLTSIIGAER-----------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-------- 149 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~-----------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~-------- 149 (219)
.+ .++||++||...+.. .+..+...|+.+|.+.+.+++.++++. |+++++++|+.+.
T Consensus 116 ~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~ 191 (347)
T 4id9_A 116 AG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDE 191 (347)
T ss_dssp TT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCT
T ss_pred cC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeeccccccc
Confidence 22 479999999765421 112456789999999999999998874 8999999999988
Q ss_pred -----CCCCcccc--------chHHHHHHHHh---hcC---------CCCC----CCCchhHHHHHHHhccCCCCcccce
Q 027744 150 -----QDEYPIAV--------GQERAVKLVRE---AAP---------LHRW----LDVKNDLASTVIYLISDGSRYMTGT 200 (219)
Q Consensus 150 -----t~~~~~~~--------~~~~~~~~~~~---~~~---------~~~~----~~~~~dva~~~~~l~s~~~~~~~G~ 200 (219)
++...... ........... ..+ ...+ ...+ |+|++++.++.... ..|+
T Consensus 192 ~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~--~~~~ 268 (347)
T 4id9_A 192 DSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTR-DMVAGILLALDHPE--AAGG 268 (347)
T ss_dssp TSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHH-HHHHHHHHHHHCGG--GTTE
T ss_pred ccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHH-HHHHHHHHHhcCcc--cCCC
Confidence 22111000 01111111111 111 1112 3345 99999999996532 4589
Q ss_pred EEEecCCcccc
Q 027744 201 TIYVDGAQSIT 211 (219)
Q Consensus 201 ~i~~dgG~~~~ 211 (219)
++++.+|..++
T Consensus 269 ~~ni~~~~~~s 279 (347)
T 4id9_A 269 TFNLGADEPAD 279 (347)
T ss_dssp EEEESCSSCEE
T ss_pred eEEECCCCccc
Confidence 99999987654
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.8e-13 Score=100.02 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=108.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++.+|++|. +++.++++ .+|++||++|.... . +. .++|+.++..+++++..
T Consensus 45 ~~~~~~~~~D~~~~--~~~~~~~~-------~~d~vi~~a~~~~~-~---~~--------~~~n~~~~~~~~~~~~~--- 100 (206)
T 1hdo_A 45 PRPAHVVVGDVLQA--ADVDKTVA-------GQDAVIVLLGTRND-L---SP--------TTVMSEGARNIVAAMKA--- 100 (206)
T ss_dssp CCCSEEEESCTTSH--HHHHHHHT-------TCSEEEECCCCTTC-C---SC--------CCHHHHHHHHHHHHHHH---
T ss_pred CCceEEEEecCCCH--HHHHHHHc-------CCCEEEECccCCCC-C---Cc--------cchHHHHHHHHHHHHHH---
Confidence 45788999999998 77776654 58999999997522 1 11 13677777777776653
Q ss_pred hcCCCCeEEEeecccccccCCCC----CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc-cCCCCccccchHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYP----GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~----~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v-~t~~~~~~~~~~~~ 162 (219)
.+ .++||++||...+.. .+ +...|+.+|.+++.+++. .|++++.++||.+ .++........
T Consensus 101 -~~-~~~~v~~Ss~~~~~~--~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~--- 166 (206)
T 1hdo_A 101 -HG-VDKVVACTSAFLLWD--PTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT--- 166 (206)
T ss_dssp -HT-CCEEEEECCGGGTSC--TTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE---
T ss_pred -hC-CCeEEEEeeeeeccC--cccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec---
Confidence 23 479999999876522 22 567899999999998842 5899999999998 33332211110
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. ...+.+.+..++ |+|+++++++... ..+|++++++||+
T Consensus 167 ---~-~~~~~~~~i~~~-Dva~~~~~~~~~~--~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 167 ---L-DGRGPSRVISKH-DLGHFMLRCLTTD--EYDGHSTYPSHQY 205 (206)
T ss_dssp ---S-SSCSSCSEEEHH-HHHHHHHHTTSCS--TTTTCEEEEECCC
T ss_pred ---c-cCCCCCCccCHH-HHHHHHHHHhcCc--cccccceeeeccc
Confidence 0 111213455666 9999999999753 3689999999986
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-14 Score=111.03 Aligned_cols=170 Identities=13% Similarity=0.043 Sum_probs=115.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCC--------CCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ--------DPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
.++.++.+|++|. +++.++++ ++|++|||||...... ...+...++++..+++|+.++..+++
T Consensus 48 ~~~~~~~~D~~d~--~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (253)
T 1xq6_A 48 GEADVFIGDITDA--DSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118 (253)
T ss_dssp CCTTEEECCTTSH--HHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHH
T ss_pred CCeeEEEecCCCH--HHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHH
Confidence 3567899999998 78777764 5899999999752211 01222334556778999999999888
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcc-----hhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAA-----AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI 155 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~-----~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~ 155 (219)
++... + .++||++||..+... ..+.. .|+.+|.+++.+++. .|+++++++||.+.++....
T Consensus 119 ~~~~~----~-~~~iv~~SS~~~~~~--~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~ 184 (253)
T 1xq6_A 119 AAKVA----G-VKHIVVVGSMGGTNP--DHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGV 184 (253)
T ss_dssp HHHHH----T-CSEEEEEEETTTTCT--TCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSS
T ss_pred HHHHc----C-CCEEEEEcCccCCCC--CCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcch
Confidence 87543 2 479999999887522 22222 366799999988763 68999999999999876431
Q ss_pred c--cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 156 A--VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 156 ~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. ..... .... ....++..++ |+|+++++++... ..+|+++++++|.
T Consensus 185 ~~~~~~~~-~~~~---~~~~~~~~~~-Dva~~~~~~~~~~--~~~g~~~~i~~~~ 232 (253)
T 1xq6_A 185 RELLVGKD-DELL---QTDTKTVPRA-DVAEVCIQALLFE--EAKNKAFDLGSKP 232 (253)
T ss_dssp SCEEEEST-TGGG---GSSCCEEEHH-HHHHHHHHHTTCG--GGTTEEEEEEECC
T ss_pred hhhhccCC-cCCc---CCCCcEEcHH-HHHHHHHHHHcCc--cccCCEEEecCCC
Confidence 1 00000 0000 0122345555 9999999999753 3579999999864
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-13 Score=106.57 Aligned_cols=177 Identities=10% Similarity=0.080 Sum_probs=120.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|.+ +.+.++++ ++|+|||+||...+. ...++++..+++|+.++..+++++..
T Consensus 44 ~~~~~~~~~D~~~~~-~~~~~~~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~--- 107 (345)
T 2bll_A 44 HPHFHFVEGDISIHS-EWIEYHVK-------KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVK--- 107 (345)
T ss_dssp CTTEEEEECCTTTCS-HHHHHHHH-------HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHH---
T ss_pred CCCeEEEeccccCcH-HHHHhhcc-------CCCEEEEcccccCcc-----chhcCHHHHHHHHHHHHHHHHHHHHH---
Confidence 347889999999841 34555554 479999999975211 12346778899999999998888754
Q ss_pred hcCCCCeEEEeecccccccCCC----------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAERGLY----------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~----------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
. +++||++||...+..... .+...|+.+|.+.+.+++.++++. |+++++++||.+.++
T Consensus 108 -~--~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~ 181 (345)
T 2bll_A 108 -Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGP 181 (345)
T ss_dssp -T--TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECS
T ss_pred -h--CCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCC
Confidence 2 379999999776421100 122389999999999999998875 799999999999988
Q ss_pred CCccc---------cchHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 152 EYPIA---------VGQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 152 ~~~~~---------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
..... .......... ...+. ..+...+ |+|++++.++.......+|+++++.+|.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~g~~~~i~~~~ 254 (345)
T 2bll_A 182 RLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE 254 (345)
T ss_dssp SCCCTTCSBSCBCHHHHHHHHHHH-HTCCEEEGGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred CcccccccccccccHHHHHHHHHH-cCCCcEEECCCCEEEEEEEHH-HHHHHHHHHHhhccccCCCceEEeCCCC
Confidence 64321 0011111111 22221 1233444 9999999998754333579999999884
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-13 Score=109.94 Aligned_cols=176 Identities=10% Similarity=0.078 Sum_probs=122.6
Q ss_pred cceEEEEecCC-ccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDME-EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 9 ~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
.++.++.+|++ |. +++.++++ ++|+|||+|+..... ...++....+++|+.++..+++++...
T Consensus 69 ~~v~~~~~Dl~~d~--~~~~~~~~-------~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~-- 132 (372)
T 3slg_A 69 ERMHFFEGDITINK--EWVEYHVK-------KCDVILPLVAIATPA-----TYVKQPLRVFELDFEANLPIVRSAVKY-- 132 (372)
T ss_dssp TTEEEEECCTTTCH--HHHHHHHH-------HCSEEEECBCCCCHH-----HHHHCHHHHHHHHTTTTHHHHHHHHHH--
T ss_pred CCeEEEeCccCCCH--HHHHHHhc-------cCCEEEEcCccccHH-----HHhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence 57999999999 87 77777765 489999999975211 123556788899999999998887543
Q ss_pred hcCCCCeEEEeecccccccCCC----------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAERGLY----------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~----------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
++++|++||...+..... .+...|+.+|.+.+.+++.++++ |+++++++|+.+.++
T Consensus 133 ----~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~ 204 (372)
T 3slg_A 133 ----GKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGP 204 (372)
T ss_dssp ----TCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECS
T ss_pred ----CCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCC
Confidence 268999999765421100 23347999999999999998765 799999999999988
Q ss_pred CCcccc---------chHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecC-Cccc
Q 027744 152 EYPIAV---------GQERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG-AQSI 210 (219)
Q Consensus 152 ~~~~~~---------~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~~ 210 (219)
...... ......... ...+.. .+...+ |+|++++.++........|+++++.+ |..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~ 280 (372)
T 3slg_A 205 GLDSIYTPKEGSSRVVTQFLGHIV-RGENISLVDGGSQKRAFTYVD-DGISALMKIIENSNGVATGKIYNIGNPNNNF 280 (372)
T ss_dssp SCCCTTCSBSCSCHHHHHHHHHHH-HTCCEEEGGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred CcccccccccccchHHHHHHHHHH-cCCCcEEeCCCceEEEEEEHH-HHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence 643210 011111111 222211 223344 99999999997644335799999998 5543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-13 Score=105.72 Aligned_cols=155 Identities=19% Similarity=0.225 Sum_probs=111.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|+||||||.. . .++++..+++|+.++.++++++.+ .
T Consensus 43 ~~~~~~~Dl~d~--~~~~~~~~-------~~d~vi~~a~~~-~--------~~~~~~~~~~n~~~~~~l~~a~~~----~ 100 (267)
T 3ay3_A 43 HEEIVACDLADA--QAVHDLVK-------DCDGIIHLGGVS-V--------ERPWNDILQANIIGAYNLYEAARN----L 100 (267)
T ss_dssp TEEECCCCTTCH--HHHHHHHT-------TCSEEEECCSCC-S--------CCCHHHHHHHTHHHHHHHHHHHHH----T
T ss_pred CccEEEccCCCH--HHHHHHHc-------CCCEEEECCcCC-C--------CCCHHHHHHHHHHHHHHHHHHHHH----h
Confidence 578899999998 77777664 589999999974 1 234678899999999999998864 2
Q ss_pred CCCCeEEEeecccccccCC----------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc-CCCCccccc
Q 027744 90 KAGGSIVFLTSIIGAERGL----------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL-QDEYPIAVG 158 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~----------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~-t~~~~~~~~ 158 (219)
+ .++||++||...+...+ ..+...|+.+|++++.+++.++++ .|+++++++||.+. ++..
T Consensus 101 ~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~----- 171 (267)
T 3ay3_A 101 G-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD----- 171 (267)
T ss_dssp T-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS-----
T ss_pred C-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC-----
Confidence 2 47999999987652211 114578999999999999988653 58999999999984 3321
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
... ...+..++ |+|++++.++.... ..+.++++.++.
T Consensus 172 -~~~---------~~~~~~~~-dva~~~~~~~~~~~--~~~~~~~~~~~~ 208 (267)
T 3ay3_A 172 -ARM---------MATWLSVD-DFMRLMKRAFVAPK--LGCTVVYGASAN 208 (267)
T ss_dssp -HHH---------HHHBCCHH-HHHHHHHHHHHSSC--CCEEEEEECCSC
T ss_pred -CCe---------eeccccHH-HHHHHHHHHHhCCC--CCceeEecCCCc
Confidence 110 01234555 99999999886532 224566665543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-13 Score=109.58 Aligned_cols=183 Identities=13% Similarity=0.092 Sum_probs=122.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.+++++. ++|+|||+||.... . ...++++..+++|+.++.++++++..
T Consensus 58 ~~~~~~~~D~~~~--~~~~~~~~~~-----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~---- 121 (348)
T 1ek6_A 58 RSVEFEEMDILDQ--GALQRLFKKY-----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMKA---- 121 (348)
T ss_dssp CCCEEEECCTTCH--HHHHHHHHHC-----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CceEEEECCCCCH--HHHHHHHHhc-----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHHH----
Confidence 4678999999998 8887777642 69999999997521 1 13456788999999999999987543
Q ss_pred cCCCCeEEEeecccccccC---------CC-CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc----
Q 027744 89 SKAGGSIVFLTSIIGAERG---------LY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP---- 154 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~---------~~-~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~---- 154 (219)
.+ .++||++||...+... +. +....|+.+|.+++.+++.++++ ..++++.+++|+.+.++...
T Consensus 122 ~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g 198 (348)
T 1ek6_A 122 HG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIG 198 (348)
T ss_dssp TT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCC
T ss_pred hC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccC
Confidence 33 4799999998765210 11 22678999999999999999887 34699999999988876321
Q ss_pred ccc----c--hHHHHHHHH-hhcCC---------------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 155 IAV----G--QERAVKLVR-EAAPL---------------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 155 ~~~----~--~~~~~~~~~-~~~~~---------------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... . ......... ...++ ..+... +|+|++++.++........++++++.+|..++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s 276 (348)
T 1ek6_A 199 EDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV-VDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS 276 (348)
T ss_dssp CCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEH-HHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred cCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEH-HHHHHHHHHHHhcccccCCceEEEeCCCCCcc
Confidence 000 0 111111111 11111 112333 49999999888542212224899998886543
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.9e-13 Score=107.41 Aligned_cols=181 Identities=9% Similarity=-0.005 Sum_probs=123.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++.+ ++|+|||+||.... ..+.++++..+++|+.++..+++++.+...
T Consensus 78 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~ 145 (375)
T 1t2a_A 78 EGNMKLHYGDLTDS--TCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGL 145 (375)
T ss_dssp --CEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CCCceEEEccCCCH--HHHHHHHHhc-----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35688999999998 8888888765 68999999997421 123467888999999999999999977543
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ + .++||++||...+... +..+...|+.+|++++.+++.++.++ ++.+..++|+.+.++.......
T Consensus 146 ~-~-~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~ 220 (375)
T 1t2a_A 146 I-N-SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFV 220 (375)
T ss_dssp T-T-TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSH
T ss_pred C-c-cceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcc
Confidence 1 1 3799999998775211 12356789999999999999998875 6788888888776654322111
Q ss_pred hHHHH----HHHHhhcC---CC------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAV----KLVREAAP---LH------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~----~~~~~~~~---~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..... .......+ .+ .+... +|+|++++.++.... ++++++.+|..+
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 280 (375)
T 1t2a_A 221 TRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA-KDYVEAMWLMLQNDE----PEDFVIATGEVH 280 (375)
T ss_dssp HHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH-HHHHHHHHHHHHSSS----CCCEEECCSCCE
T ss_pred hHHHHHHHHHHHcCCCceeEeCCCCceeeeEEH-HHHHHHHHHHHhcCC----CceEEEeCCCcc
Confidence 11111 11111111 11 12334 499999999886432 467888777643
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.7e-13 Score=107.34 Aligned_cols=180 Identities=16% Similarity=0.120 Sum_probs=116.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++ +++|+|||+||... ..+.++++..+++|+.++..+++++.+...
T Consensus 63 ~~~~~~~~~Dl~d~--~~~~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~ 128 (342)
T 2hrz_A 63 SGAVDARAADLSAP--GEAEKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANG 128 (342)
T ss_dssp CSEEEEEECCTTST--THHHHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceeEEEcCCCCH--HHHHHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45688999999999 88877764 47999999999752 134567899999999999999999887543
Q ss_pred hcCCCCeEEEeecccccccCCCC----------CcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEee--cCCccCCCC
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYP----------GAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIA--RGLHLQDEY 153 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~----------~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~--pG~v~t~~~ 153 (219)
+.+..++||++||...+... .+ +...|+.+|.+.+.+++.++.+.. ...+|++.+. ||.+.++..
T Consensus 129 ~~~~~~~iv~~SS~~~~~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~ 207 (342)
T 2hrz_A 129 KDGYKPRVVFTSSIAVFGAP-LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS 207 (342)
T ss_dssp HHCCCCEEEEEEEGGGCCSS-CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG
T ss_pred ccCCCcEEEEeCchHhhCCC-CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH
Confidence 32113799999999776221 12 567899999999999999887631 1234555554 665443221
Q ss_pred ccccchHHHHHHHHhhc----CCCC-----CCCCchhHHHHHHHhccCCCC-cccceEEEecC
Q 027744 154 PIAVGQERAVKLVREAA----PLHR-----WLDVKNDLASTVIYLISDGSR-YMTGTTIYVDG 206 (219)
Q Consensus 154 ~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~dva~~~~~l~s~~~~-~~~G~~i~~dg 206 (219)
. .......... ... +... +..++ |+|++++.++..... ...|+++++.|
T Consensus 208 ~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~-Dva~~~~~~~~~~~~~~~~~~~~ni~g 266 (342)
T 2hrz_A 208 G--FFSNILREPL-VGQEAVLPVPESIRHWHASPR-SAVGFLIHGAMIDVEKVGPRRNLSMPG 266 (342)
T ss_dssp G--HHHHHHHHHH-TTCCEEECSCTTCEEEEECHH-HHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred H--HHHHHHHHHh-cCCCeeccCCCccceeeEehH-HHHHHHHHHHhccccccCCccEEEcCC
Confidence 1 1111111111 111 1111 23344 999999988854211 01467888843
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=8.4e-13 Score=107.01 Aligned_cols=181 Identities=7% Similarity=-0.021 Sum_probs=121.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.+|++|. +++.++++.+ ++|++||+||.... ..+.++++..+++|+.++.++++++.+...
T Consensus 54 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (372)
T 1db3_A 54 NPKFHLHYGDLSDT--SNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGL 121 (372)
T ss_dssp -CCEEECCCCSSCH--HHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CCceEEEECCCCCH--HHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35788999999998 8888888765 68999999997522 123456788899999999999999977543
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+ + .++||++||...+... +..+...|+.+|++.+.+++.++.++ ++.+..++|..+.++.......
T Consensus 122 ~-~-~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~ 196 (372)
T 1db3_A 122 E-K-KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFV 196 (372)
T ss_dssp T-T-TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSH
T ss_pred C-C-CcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcch
Confidence 2 1 3799999998765211 12346789999999999999999876 5666677776655553322111
Q ss_pred hHHHHHHH---Hhhc-C---CC------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLV---REAA-P---LH------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~---~~~~-~---~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........ .... + .+ .+... +|+|++++.++.... ++++++.+|..+
T Consensus 197 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 256 (372)
T 1db3_A 197 TRKITRAIANIAQGLESCLYLGNMDSLRDWGHA-KDYVKMQWMMLQQEQ----PEDFVIATGVQY 256 (372)
T ss_dssp HHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH-HHHHHHHHHTTSSSS----CCCEEECCCCCE
T ss_pred hhHHHHHHHHHHcCCCCceeecCCCceeeeeEH-HHHHHHHHHHHhcCC----CceEEEcCCCce
Confidence 11111111 1111 1 11 12333 499999998885422 477888877643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.3e-14 Score=113.62 Aligned_cols=173 Identities=12% Similarity=0.089 Sum_probs=118.4
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+.+|+++. +.++.+++. ..++++|+|||+||.... +.++++..+++|+.++..+++++.+. + .
T Consensus 94 ~~~d~~~~--~~~~~~~~~--~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-~- 156 (357)
T 2x6t_A 94 IADYMDKE--DFLIQIMAG--EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I- 156 (357)
T ss_dssp CSEEEEHH--HHHHHHHTT--CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-
T ss_pred EeeecCcH--HHHHHHHhh--cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-C-
Confidence 56888887 666666542 124579999999997522 23357788999999999999998762 2 3
Q ss_pred eEEEeecccccccCCC---------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--c--hH
Q 027744 94 SIVFLTSIIGAERGLY---------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--G--QE 160 (219)
Q Consensus 94 ~iv~iss~~~~~~~~~---------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--~--~~ 160 (219)
+||++||...+..... .+...|+.+|.+.+.+++.++.+ .|+++++++||.+.++...... . ..
T Consensus 157 r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~ 233 (357)
T 2x6t_A 157 PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAF 233 (357)
T ss_dssp CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHH
T ss_pred eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHH
Confidence 8999999876522100 23568999999999999998876 3899999999999987643110 0 11
Q ss_pred HHHHHHHhhcC----------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 161 RAVKLVREAAP----------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 161 ~~~~~~~~~~~----------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..........+ ...+..++ |+|++++.++.... |+++++++|..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~-Dva~ai~~~~~~~~----~~~~~i~~~~~~s 289 (357)
T 2x6t_A 234 HLNTQLNNGESPKLFEGSENFKRDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAES 289 (357)
T ss_dssp HHHHHHHTTCCCEEETTGGGCEECEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCEE
T ss_pred HHHHHHHcCCCcEEeCCCCcceEccEEHH-HHHHHHHHHHhcCC----CCeEEecCCCccc
Confidence 11111111111 11234444 99999999986532 8899999886543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-13 Score=107.58 Aligned_cols=181 Identities=10% Similarity=0.068 Sum_probs=122.5
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|. +++.+++++ .++|+|||+||.... . .+.++++..+++|+.++..+++++.. .
T Consensus 45 ~~~~~~~D~~~~--~~~~~~~~~-----~~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~ 108 (330)
T 2c20_A 45 GAKFYNGDLRDK--AFLRDVFTQ-----ENIEAVMHFAADSLV-G----VSMEKPLQYYNNNVYGALCLLEVMDE----F 108 (330)
T ss_dssp TSEEEECCTTCH--HHHHHHHHH-----SCEEEEEECCCCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHH----T
T ss_pred CcEEEECCCCCH--HHHHHHHhh-----cCCCEEEECCcccCc-c----ccccCHHHHHHHHhHHHHHHHHHHHH----c
Confidence 678999999998 887777664 369999999997521 1 13467888999999999999988643 2
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc----
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---- 156 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~---- 156 (219)
+ .++||++||...+... +..+...|+.+|.+.+.+++.+++++ |+++++++||.+.++.....
T Consensus 109 ~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~ 184 (330)
T 2c20_A 109 K-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGED 184 (330)
T ss_dssp T-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCC
T ss_pred C-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccc
Confidence 2 4799999998765211 11346789999999999999998764 89999999999988752111
Q ss_pred ---cc--hHHHHHHHHhh-cCCC---------------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 ---VG--QERAVKLVREA-APLH---------------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ---~~--~~~~~~~~~~~-~~~~---------------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. ........... .++. .+... +|+|++++.++........++++++.+|..++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v-~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s 259 (330)
T 2c20_A 185 HRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV-EDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS 259 (330)
T ss_dssp CSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEH-HHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred cccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeH-HHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence 00 11111111111 1110 11223 49999999888532211236899998876543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.9e-13 Score=108.39 Aligned_cols=167 Identities=17% Similarity=0.118 Sum_probs=113.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++++.+|++|. +++.++++ ++|+|||+|+.. . .... +..+..+++|+.++.++++++.+..
T Consensus 57 ~~~~~~~Dl~d~--~~~~~~~~-------~~d~Vih~A~~~-~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~--- 118 (337)
T 2c29_D 57 HLTLWKADLADE--GSFDEAIK-------GCTGVFHVATPM-D---FESK--DPENEVIKPTIEGMLGIMKSCAAAK--- 118 (337)
T ss_dssp HEEEEECCTTST--TTTHHHHT-------TCSEEEECCCCC-C---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---
T ss_pred eEEEEEcCCCCH--HHHHHHHc-------CCCEEEEecccc-C---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 588999999998 88777664 589999999864 2 1111 2345688999999999999987642
Q ss_pred CCCCeEEEeecccccccCCC--------------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 90 KAGGSIVFLTSIIGAERGLY--------------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~--------------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
. .++||++||..+...... ++...|+.+|.+.+.+++.++++. |+++++++||.+.
T Consensus 119 ~-~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~ 194 (337)
T 2c29_D 119 T-VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVV 194 (337)
T ss_dssp C-CCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEE
T ss_pred C-ccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceE
Confidence 1 379999999875321100 123469999999999998877653 7999999999999
Q ss_pred CCCCccccchHHHHH---HH-----HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceE
Q 027744 150 QDEYPIAVGQERAVK---LV-----REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 201 (219)
Q Consensus 150 t~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~ 201 (219)
++............. .. ....+..++..++ |+|+++++++... ..+|..
T Consensus 195 Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~~ 251 (337)
T 2c29_D 195 GPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD-DLCNAHIYLFENP--KAEGRY 251 (337)
T ss_dssp SCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH-HHHHHHHHHHHCT--TCCEEE
T ss_pred CCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH-HHHHHHHHHhcCc--ccCceE
Confidence 987543222211110 00 0011223356776 9999999998642 335554
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-12 Score=103.84 Aligned_cols=171 Identities=15% Similarity=0.106 Sum_probs=118.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++ . +++.++++ ++|+|||+|+..... +++..+++|+.++..+++++.. .
T Consensus 43 ~~~~~~~Dl~-~--~~~~~~~~-------~~d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~----~ 99 (311)
T 3m2p_A 43 DYEYRVSDYT-L--EDLINQLN-------DVDAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYE----N 99 (311)
T ss_dssp CCEEEECCCC-H--HHHHHHTT-------TCSEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHH----T
T ss_pred ceEEEEcccc-H--HHHHHhhc-------CCCEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHH----c
Confidence 6788999999 7 77776654 699999999975322 3445678899999988888753 2
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
+ -+++|++||...+... +..+...|+.+|.+.+.+++.++.+ .|+++++++|+.+.++.........
T Consensus 100 ~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~ 175 (311)
T 3m2p_A 100 N-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMIN 175 (311)
T ss_dssp T-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHH
T ss_pred C-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHH
Confidence 2 4689999997665111 1234578999999999999998885 4899999999999987665321111
Q ss_pred HHHHHHHhhcCCCC---------CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 161 RAVKLVREAAPLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 161 ~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..........+... +... +|+|++++.++.... .|+++++.+|..++
T Consensus 176 ~~~~~~~~~~~~~~~g~~~~~~~~v~v-~Dva~a~~~~~~~~~---~~~~~~i~~~~~~s 231 (311)
T 3m2p_A 176 RFFRQAFHGEQLTLHANSVAKREFLYA-KDAAKSVIYALKQEK---VSGTFNIGSGDALT 231 (311)
T ss_dssp HHHHHHHTCCCEEESSBCCCCEEEEEH-HHHHHHHHHHTTCTT---CCEEEEECCSCEEC
T ss_pred HHHHHHHcCCCeEEecCCCeEEceEEH-HHHHHHHHHHHhcCC---CCCeEEeCCCCccc
Confidence 11122112222111 1222 499999999996543 78999999887644
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=107.44 Aligned_cols=173 Identities=14% Similarity=0.088 Sum_probs=93.8
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
++.+|++|. +++.++++.. ++|+|||+||.... ..+.++++..+++|+.++..+++++.+. +
T Consensus 41 ~~~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~ 102 (315)
T 2ydy_A 41 FEQVNLLDS--NAVHHIIHDF-----QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------G 102 (315)
T ss_dssp -------------CHHHHHHH-----CCSEEEECC------------------------CHHHHHHHHHHHHH------T
T ss_pred eEEecCCCH--HHHHHHHHhh-----CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------C
Confidence 567999998 8888877754 68999999997522 1245678899999999999999998762 3
Q ss_pred CeEEEeeccccccc--------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcc--ccchHHH
Q 027744 93 GSIVFLTSIIGAER--------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPI--AVGQERA 162 (219)
Q Consensus 93 g~iv~iss~~~~~~--------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~--~~~~~~~ 162 (219)
++||++||...+.. .+..+...|+.+|.+.+.+++.++. .+..++|+.+.++.... .......
T Consensus 103 ~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~~~~~~~~~~~~~~ 175 (315)
T 2ydy_A 103 AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNL-------GAAVLRIPILYGEVEKLEESAVTVMF 175 (315)
T ss_dssp CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCT-------TCEEEEECSEECSCSSGGGSTTGGGH
T ss_pred CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCCCCcccccHHHHHH
Confidence 59999999887521 0124567899999999999998642 33566776666544321 0101111
Q ss_pred HHHH-Hhh------cCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCcccc
Q 027744 163 VKLV-REA------APLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~-~~~------~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~ 211 (219)
.... ... .+...+..++ |+|++++++++.. .....|+++++++|..++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s 231 (315)
T 2ydy_A 176 DKVQFSNKSANMDHWQQRFPTHVK-DVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT 231 (315)
T ss_dssp HHHHCCSSCEEEECSSBBCCEEHH-HHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred HHHHhcCCCeeeccCceECcEEHH-HHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence 1111 010 1223344555 9999999988642 123468999999987654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.2e-12 Score=102.17 Aligned_cols=179 Identities=10% Similarity=-0.015 Sum_probs=122.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++.++++.+ ++|+|||+||.... ..+.++++..+++|+.++..+++++.+.
T Consensus 62 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-- 127 (335)
T 1rpn_A 62 EGDIQYEDGDMADA--CSVQRAVIKA-----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF-- 127 (335)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH--
T ss_pred cCceEEEECCCCCH--HHHHHHHHHc-----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh--
Confidence 35688999999998 8888887765 68999999997421 1123457788999999999999998653
Q ss_pred hcCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+..++||++||...+... +..+...|+.+|.+.+.+++.+++++ ++++.+++|+.+.++.......
T Consensus 128 --~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~ 202 (335)
T 1rpn_A 128 --SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFV 202 (335)
T ss_dssp --CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSH
T ss_pred --CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcc
Confidence 212799999998765211 11235689999999999999998875 6888889999888765432211
Q ss_pred hHHHHHHH---Hhhc-CC---C------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLV---REAA-PL---H------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~---~~~~-~~---~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
........ .... +. + .+... +|+|++++.++.... ++++++.+|..+
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v-~Dva~a~~~~~~~~~----~~~~ni~~~~~~ 262 (335)
T 1rpn_A 203 TRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA-GDYVEAMWLMLQQDK----ADDYVVATGVTT 262 (335)
T ss_dssp HHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH-HHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred hHHHHHHHHHHHcCCCceEEeCCCcceeceEEH-HHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence 11111111 1111 11 1 12223 499999999886532 478888887644
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.5e-12 Score=113.43 Aligned_cols=176 Identities=10% Similarity=0.090 Sum_probs=121.6
Q ss_pred CcceEEEEecCCccchhH-HHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGA-FDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
..+++++.+|++|. ++ ++.+++ ++|+|||+||..... ...++++..+++|+.++..+++++..
T Consensus 359 ~~~v~~v~~Dl~d~--~~~~~~~~~-------~~D~Vih~Aa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~-- 422 (660)
T 1z7e_A 359 HPHFHFVEGDISIH--SEWIEYHVK-------KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVK-- 422 (660)
T ss_dssp CTTEEEEECCTTTC--HHHHHHHHH-------HCSEEEECCCCCCTH-----HHHHSHHHHHHHHTHHHHHHHHHHHH--
T ss_pred CCceEEEECCCCCc--HHHHHHhhc-------CCCEEEECceecCcc-----ccccCHHHHHHhhhHHHHHHHHHHHH--
Confidence 35788999999997 54 444443 489999999975211 12356778999999999999888754
Q ss_pred HhcCCCCeEEEeecccccccCCC----------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccC
Q 027744 87 KESKAGGSIVFLTSIIGAERGLY----------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 150 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~----------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t 150 (219)
. ++++|++||...+..... .+...|+.+|.+.+.+++.++++. |+++++++||.+.+
T Consensus 423 --~--~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~G 495 (660)
T 1z7e_A 423 --Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMG 495 (660)
T ss_dssp --T--TCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEES
T ss_pred --h--CCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccC
Confidence 2 379999999876521100 123479999999999999998775 79999999999998
Q ss_pred CCCccc---------cchHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 151 DEYPIA---------VGQERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 151 ~~~~~~---------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
+..... .......... ...+. ..+...+ |+|++++.+++......+|+++++++|.
T Consensus 496 p~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~g~g~~~~~~i~v~-Dva~ai~~~l~~~~~~~~g~~~ni~~~~ 569 (660)
T 1z7e_A 496 PRLDNLNAARIGSSRAITQLILNLV-EGSPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE 569 (660)
T ss_dssp TTSSCHHHHTTTCSCHHHHHHHHHH-HTCCEEEEGGGCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred CCccccccccccccchHHHHHHHHH-cCCCcEEeCCCCeEEEEEEHH-HHHHHHHHHHhCccccCCCeEEEECCCC
Confidence 865321 0011111111 22221 1133445 9999999998754434679999999985
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=6.2e-13 Score=104.37 Aligned_cols=164 Identities=15% Similarity=0.113 Sum_probs=113.7
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. +++.++++.. ++|++||+||.... ..+.++++..+++|+.++.++++++.+. + .+
T Consensus 46 ~~Dl~d~--~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~--~~ 107 (292)
T 1vl0_A 46 DLDITNV--LAVNKFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV----G--AE 107 (292)
T ss_dssp TCCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----T--CE
T ss_pred cCCCCCH--HHHHHHHHhc-----CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C--Ce
Confidence 4799988 8887777654 69999999997421 1234678899999999999999998762 2 49
Q ss_pred EEEeecccccccCC---------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 95 IVFLTSIIGAERGL---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 95 iv~iss~~~~~~~~---------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
||++||...+.... ..+...|+.+|.+.+.+++.++. .+..++|+.+.++ .... ... ....
T Consensus 108 iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~-~~~-~~~~ 177 (292)
T 1vl0_A 108 IVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNF-VKT-MINL 177 (292)
T ss_dssp EEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCH-HHH-HHHH
T ss_pred EEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcCh-HHH-HHHH
Confidence 99999987652110 12457899999999999988643 3788999988876 2211 111 1111
Q ss_pred HHhhcC-------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAP-------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....+ ...+..++ |+|++++++++.. +|+++++++|..++
T Consensus 178 ~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~----~~~~~~i~~~~~~s 225 (292)
T 1vl0_A 178 GKTHDELKVVHDQVGTPTSTV-DLARVVLKVIDEK----NYGTFHCTCKGICS 225 (292)
T ss_dssp HHHCSEEEEESSCEECCEEHH-HHHHHHHHHHHHT----CCEEEECCCBSCEE
T ss_pred HhcCCcEEeecCeeeCCccHH-HHHHHHHHHHhcC----CCcEEEecCCCCcc
Confidence 111111 12334455 9999999999753 68999999986543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.7e-13 Score=104.54 Aligned_cols=170 Identities=14% Similarity=0.081 Sum_probs=110.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHH-HHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGED-EFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
++.++.+|++|. ++++++++ ++|+|||+|+.. . ...+ .++.++++|+.++.++++++.+..
T Consensus 54 ~~~~~~~Dl~d~--~~~~~~~~-------~~d~vih~A~~~-~------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-- 115 (322)
T 2p4h_X 54 KLHFFNADLSNP--DSFAAAIE-------GCVGIFHTASPI-D------FAVSEPEEIVTKRTVDGALGILKACVNSK-- 115 (322)
T ss_dssp HEEECCCCTTCG--GGGHHHHT-------TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS--
T ss_pred ceEEEecCCCCH--HHHHHHHc-------CCCEEEEcCCcc-c------CCCCChHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 578899999998 88777764 479999999642 1 1122 245689999999999999886531
Q ss_pred cCCCCeEEEeecccccccCCCC-------------------Cc-chhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCc
Q 027744 89 SKAGGSIVFLTSIIGAERGLYP-------------------GA-AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~-------------------~~-~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v 148 (219)
+ .++||++||..+....+.. +. ..|+.+|.+.+.+++.++++ .|+++++++||.+
T Consensus 116 -~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v 190 (322)
T 2p4h_X 116 -T-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFI 190 (322)
T ss_dssp -S-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEE
T ss_pred -C-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCce
Confidence 2 4799999998753211000 01 16999999988888776654 4899999999999
Q ss_pred cCCCCccccchHH--HHHHHHhh-cCC--C--CCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 149 LQDEYPIAVGQER--AVKLVREA-APL--H--RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 149 ~t~~~~~~~~~~~--~~~~~~~~-~~~--~--~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.++.......... ........ ... . .+..++ |+|++++++++.. ..+|+ +++.+
T Consensus 191 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~g~-~~~~~ 251 (322)
T 2p4h_X 191 VGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVD-DVARAHIYLLENS--VPGGR-YNCSP 251 (322)
T ss_dssp ESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHH-HHHHHHHHHHHSC--CCCEE-EECCC
T ss_pred ECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHH-HHHHHHHHHhhCc--CCCCC-EEEcC
Confidence 9987543222111 10111110 111 1 245665 9999999998642 25676 55443
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=107.19 Aligned_cols=123 Identities=17% Similarity=0.119 Sum_probs=96.8
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++.+|++|. +++.+++++ ++++|+|||+||.... . .+.++++..+++|+.++.++++++.. .+
T Consensus 71 ~~~~~~Dl~d~--~~~~~~~~~----~~~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~ 135 (397)
T 1gy8_A 71 AALEVGDVRNE--DFLNGVFTR----HGPIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLL----HK 135 (397)
T ss_dssp CEEEESCTTCH--HHHHHHHHH----SCCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT
T ss_pred EEEEECCCCCH--HHHHHHHHh----cCCCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHH----hC
Confidence 88999999998 777776653 4669999999997521 1 13467888999999999999998643 22
Q ss_pred CCCeEEEeecccccccCC----------------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 91 AGGSIVFLTSIIGAERGL----------------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~----------------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
.++||++||...+.... ..+...|+.+|.+.+.+++.++.++ |+++++++|+.+.++.
T Consensus 136 -~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 136 -CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH 209 (397)
T ss_dssp -CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred -CCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence 47999999976652110 0135789999999999999999887 7999999999998775
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=101.61 Aligned_cols=175 Identities=10% Similarity=0.038 Sum_probs=118.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.+++++. ++|++||+||.... ...++++..+++|+.++.++++++.+ .
T Consensus 46 ~~~~~~~D~~d~--~~~~~~~~~~-----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~ 108 (312)
T 2yy7_A 46 SGPFEVVNALDF--NQIEHLVEVH-----KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----K 108 (312)
T ss_dssp SSCEEECCTTCH--HHHHHHHHHT-----TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred CCceEEecCCCH--HHHHHHHhhc-----CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----c
Confidence 467889999998 8887777643 68999999997421 12356788899999999999988754 2
Q ss_pred CCCCeEEEeecccccccCC----------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-
Q 027744 90 KAGGSIVFLTSIIGAERGL----------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG- 158 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~----------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~- 158 (219)
+ .+++|++||...+.... ..+...|+.+|.+.+.+++.++++. |+++++++||.+.++.......
T Consensus 109 ~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~ 184 (312)
T 2yy7_A 109 K-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGT 184 (312)
T ss_dssp S-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCT
T ss_pred C-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCch
Confidence 2 46999999987652210 1246789999999999999988775 7999999999998864321110
Q ss_pred ----hHHHHHHHHhhc-C-CC------CCCCCchhHHHHHHHhccCCCCcc-cceEEEecC
Q 027744 159 ----QERAVKLVREAA-P-LH------RWLDVKNDLASTVIYLISDGSRYM-TGTTIYVDG 206 (219)
Q Consensus 159 ----~~~~~~~~~~~~-~-~~------~~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~dg 206 (219)
............ + .. .+... +|+|++++.++....... .|+++++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~~~~~~~~~~~~~~~~~~ni~~ 244 (312)
T 2yy7_A 185 TDYAVDIFYKAIADKKYECFLSSETKMPMMYM-DDAIDATINIMKAPVEKIKIHSSYNLAA 244 (312)
T ss_dssp TTHHHHHHHHHHHTSEEEESSCTTCCEEEEEH-HHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred hhhHHHHHHHHHcCCCeEEecCCCceeeeeeH-HHHHHHHHHHHhCcccccccCceEEeCC
Confidence 111111111111 1 11 11222 499999999886533222 258899875
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.2e-12 Score=101.64 Aligned_cols=160 Identities=18% Similarity=0.109 Sum_probs=108.8
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+.+|++|. +++.++++.+ ++|++|||||.... ..+.++++..+++|+.++..+++++.+ . ++
T Consensus 39 ~~~Dl~~~--~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~ 100 (273)
T 2ggs_A 39 YKLDLTDF--PRLEDFIIKK-----RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DS 100 (273)
T ss_dssp EECCTTSH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TC
T ss_pred ceeccCCH--HHHHHHHHhc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CC
Confidence 67999998 8888887765 69999999997521 133567899999999999999999864 2 36
Q ss_pred eEEEeecccccccCC--------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 94 SIVFLTSIIGAERGL--------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 94 ~iv~iss~~~~~~~~--------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+||++||..++.... ..+...|+.+|++++.+++. +....++|+.+.++ ..... .....
T Consensus 101 ~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~---------~~~~~iR~~~v~G~---~~~~~-~~~~~ 167 (273)
T 2ggs_A 101 YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ---------DDSLIIRTSGIFRN---KGFPI-YVYKT 167 (273)
T ss_dssp EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC---------TTCEEEEECCCBSS---SSHHH-HHHHH
T ss_pred eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC---------CCeEEEeccccccc---cHHHH-HHHHH
Confidence 999999988762210 11357899999999999887 23456667666631 11111 11111
Q ss_pred HHhhcC------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAP------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....+ ...+..++ |+|++++++++.. .+| ++++++ ..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~-dva~~i~~~~~~~---~~g-~~~i~~-~~~ 212 (273)
T 2ggs_A 168 LKEGKTVFAFKGYYSPISAR-KLASAILELLELR---KTG-IIHVAG-ERI 212 (273)
T ss_dssp HHTTCCEEEESCEECCCBHH-HHHHHHHHHHHHT---CCE-EEECCC-CCE
T ss_pred HHcCCCEEeecCCCCceEHH-HHHHHHHHHHhcC---cCC-eEEECC-Ccc
Confidence 112111 23455666 9999999999753 244 889987 543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.2e-13 Score=103.03 Aligned_cols=165 Identities=7% Similarity=-0.014 Sum_probs=114.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+||.. .. . ...+++|+.++..+++++..
T Consensus 46 ~~~~~~~~Dl~d~--~~~~~~~~-------~~d~vi~~a~~~-~~-------~---~~~~~~n~~~~~~l~~~~~~---- 101 (227)
T 3dhn_A 46 EHLKVKKADVSSL--DEVCEVCK-------GADAVISAFNPG-WN-------N---PDIYDETIKVYLTIIDGVKK---- 101 (227)
T ss_dssp TTEEEECCCTTCH--HHHHHHHT-------TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHH----
T ss_pred CceEEEEecCCCH--HHHHHHhc-------CCCEEEEeCcCC-CC-------C---hhHHHHHHHHHHHHHHHHHH----
Confidence 5789999999998 88777765 589999999864 11 0 12577888888888887644
Q ss_pred cCCCCeEEEeecccccccC--------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 89 SKAGGSIVFLTSIIGAERG--------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~--------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
.+ .+++|++||..+.... +..+...|+.+|.+.+.+.+.+++ ..|+++++++||.+.++......-.
T Consensus 102 ~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~- 176 (227)
T 3dhn_A 102 AG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYR- 176 (227)
T ss_dssp TT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCE-
T ss_pred hC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCcccccee-
Confidence 33 4699999998765221 123467899999999999888775 3589999999999987754321100
Q ss_pred HHHHHHHhhcCC-----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 RAVKLVREAAPL-----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....+. ..+...+ |+|++++.++... ...|+++++.+....
T Consensus 177 -----~~~~~~~~~~~~~~~i~~~-Dva~ai~~~l~~~--~~~g~~~~~~~~~~~ 223 (227)
T 3dhn_A 177 -----LGKDDMIVDIVGNSHISVE-DYAAAMIDELEHP--KHHQERFTIGYLEHH 223 (227)
T ss_dssp -----EESSBCCCCTTSCCEEEHH-HHHHHHHHHHHSC--CCCSEEEEEECCSCC
T ss_pred -----ecCCCcccCCCCCcEEeHH-HHHHHHHHHHhCc--cccCcEEEEEeehhc
Confidence 0000110 1233444 9999999999654 457999999887643
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=7.3e-13 Score=104.67 Aligned_cols=173 Identities=12% Similarity=0.086 Sum_probs=113.9
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+.+|+++. +.++.+++... ++++|++||+||.... ..++++..+++|+.++..+++++... + .
T Consensus 47 ~~~d~~~~--~~~~~~~~~~~--~~~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~- 109 (310)
T 1eq2_A 47 IADYMDKE--DFLIQIMAGEE--FGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER----E-I- 109 (310)
T ss_dssp CSEEEEHH--HHHHHHHTTCC--CSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-C-
T ss_pred eccccccH--HHHHHHHhccc--cCCCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc----C-C-
Confidence 55777776 55555543100 1269999999997522 22346788999999999999988653 3 4
Q ss_pred eEEEeecccccccCC---------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---c-hH
Q 027744 94 SIVFLTSIIGAERGL---------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV---G-QE 160 (219)
Q Consensus 94 ~iv~iss~~~~~~~~---------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~---~-~~ 160 (219)
++|++||...+.... ..+...|+.+|.+.+.+++.++++ .|+++++++||.+.++...... . ..
T Consensus 110 ~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~ 186 (310)
T 1eq2_A 110 PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAF 186 (310)
T ss_dssp CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHH
T ss_pred eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHH
Confidence 899999987642110 123568999999999999998765 4899999999999988654210 0 01
Q ss_pred HHHHHHHhhc---------C-CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 161 RAVKLVREAA---------P-LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 161 ~~~~~~~~~~---------~-~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.......... . ...+...+ |+|++++.++.... |+++++.+|..++
T Consensus 187 ~~~~~~~~~~~~~~~~~g~~~~~~~i~v~-Dva~~~~~~~~~~~----~~~~~i~~~~~~s 242 (310)
T 1eq2_A 187 HLNTQLNNGESPKLFEGSENFKRDFVYVG-DVADVNLWFLENGV----SGIFNLGTGRAES 242 (310)
T ss_dssp HHHHHHHC-------------CBCEEEHH-HHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred HHHHHHHcCCCcEEecCCCcceEccEEHH-HHHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence 1111110111 1 12233344 99999999986532 8899999887544
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.9e-12 Score=101.79 Aligned_cols=124 Identities=10% Similarity=0.059 Sum_probs=92.5
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++. .++|+|||+||.... . ...++++..+++|+.++..+++++..
T Consensus 50 ~~~~~~~~Dl~~~--~~~~~~~~~-----~~~D~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~---- 113 (338)
T 1udb_A 50 KHPTFVEGDIRNE--ALMTEILHD-----HAIDTVIHFAGLKAV-G----ESVQKPLEYYDNNVNGTLRLISAMRA---- 113 (338)
T ss_dssp SCCEEEECCTTCH--HHHHHHHHH-----TTCSEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CcceEEEccCCCH--HHHHHHhhc-----cCCCEEEECCccCcc-c----cchhcHHHHHHHHHHHHHHHHHHHHh----
Confidence 4578899999998 888777764 259999999997421 1 12345677899999999999886543
Q ss_pred cCCCCeEEEeeccccccc---------CCC-CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 89 SKAGGSIVFLTSIIGAER---------GLY-PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---------~~~-~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
.+ .++||++||...+.. .+. ++...|+.+|++++.+++.++++. .++++.+++|+.+..+
T Consensus 114 ~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 183 (338)
T 1udb_A 114 AN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA 183 (338)
T ss_dssp HT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred cC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence 33 479999999876411 011 236789999999999999999874 3689999998766554
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-12 Score=101.69 Aligned_cols=180 Identities=11% Similarity=0.032 Sum_probs=120.0
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
+.++.+|++|. +++.++++.. ++|+|||+|+.... .....++....+++|+.++.++++++... +
T Consensus 40 ~~~~~~D~~d~--~~~~~~~~~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~ 104 (319)
T 4b8w_A 40 VSSKDADLTDT--AQTRALFEKV-----QPTHVIHLAAMVGG----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----G 104 (319)
T ss_dssp CCTTTCCTTSH--HHHHHHHHHS-----CCSEEEECCCCCCC----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred cCceecccCCH--HHHHHHHhhc-----CCCEEEECceeccc----ccccccCHHHHHHHHHHHHHHHHHHHHHc----C
Confidence 34457899998 8888777642 59999999997421 01123456678999999999999887542 2
Q ss_pred CCCeEEEeeccccccc--------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 91 AGGSIVFLTSIIGAER--------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~--------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
-+++|++||...+.. .+.+....|+.+|.+.+.+++.++++. |+++++++|+.+.++.....
T Consensus 105 -~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~ 180 (319)
T 4b8w_A 105 -ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFN 180 (319)
T ss_dssp -CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCC
T ss_pred -CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCC
Confidence 468999999876511 111222369999999999999998875 79999999999998765421
Q ss_pred cc-----hHHHHHH---HHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 VG-----QERAVKL---VREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ~~-----~~~~~~~---~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. ....... .....++. .+... +|+|++++.++.... ...|+++++.+|..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v-~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s 250 (319)
T 4b8w_A 181 IEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYS-LDLAQLFIWVLREYN-EVEPIILSVGEEDEVS 250 (319)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEH-HHHHHHHHHHHHHCC-CSSCEEECCCGGGCEE
T ss_pred CccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeH-HHHHHHHHHHHhccc-cCCceEEEecCCCcee
Confidence 10 1111110 11222221 12233 499999999886532 2467899998776543
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.2e-11 Score=96.72 Aligned_cols=169 Identities=12% Similarity=0.110 Sum_probs=115.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|+.+. . +.++|+|||+||.... .. ..++++..+++|+.++.++++++...
T Consensus 74 ~~~~~~~~~D~~~~--~------------~~~~d~vih~A~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~a~~~~-- 132 (343)
T 2b69_A 74 HENFELINHDVVEP--L------------YIEVDQIYHLASPASP-PN----YMYNPIKTLKTNTIGTLNMLGLAKRV-- 132 (343)
T ss_dssp CTTEEEEECCTTSC--C------------CCCCSEEEECCSCCSH-HH----HTTCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCceEEEeCccCCh--h------------hcCCCEEEECccccCc-hh----hhhCHHHHHHHHHHHHHHHHHHHHHh--
Confidence 35688999999886 3 3579999999997421 10 11245678899999999999988642
Q ss_pred hcCCCCeEEEeeccccccc--------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 88 ESKAGGSIVFLTSIIGAER--------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~--------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+.++|++||...+.. .+..+...|+.+|.+.+.+++.++++. |+++++++||.+.++..
T Consensus 133 ----~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 133 ----GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 205 (343)
T ss_dssp ----TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred ----CCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence 248999999865411 112345679999999999999988775 79999999999998864
Q ss_pred ccccc---hHHHHHHHHhhcCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 154 PIAVG---QERAVKLVREAAPL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 154 ~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..... ........ ...+. ..+... +|+|++++.++... .|+++++.+|..+
T Consensus 206 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v-~Dva~a~~~~~~~~----~~~~~~i~~~~~~ 268 (343)
T 2b69_A 206 HMNDGRVVSNFILQAL-QGEPLTVYGSGSQTRAFQYV-SDLVNGLVALMNSN----VSSPVNLGNPEEH 268 (343)
T ss_dssp CTTCCCHHHHHHHHHH-HTCCEEEESSSCCEEECEEH-HHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred CCCcccHHHHHHHHHH-cCCCceEcCCCCeEEeeEeH-HHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence 32111 11111111 22211 112344 49999999988643 2678999888654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-11 Score=97.65 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=116.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.+++++ .++|+|||+|+.... ...++++..+++|+.++.++++++.+ .
T Consensus 40 ~~~~~~~D~~d~--~~~~~~~~~-----~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~ 102 (317)
T 3ajr_A 40 GIKFITLDVSNR--DEIDRAVEK-----YSIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQ----H 102 (317)
T ss_dssp TCCEEECCTTCH--HHHHHHHHH-----TTCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----T
T ss_pred CceEEEecCCCH--HHHHHHHhh-----cCCcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHH----c
Confidence 467889999998 888777764 269999999997421 12356788899999999999998754 2
Q ss_pred CCCCeEEEeecccccccCC----------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc--c
Q 027744 90 KAGGSIVFLTSIIGAERGL----------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA--V 157 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~----------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~--~ 157 (219)
+ .+++|++||...+.... ..+...|+.+|.+.+.+++.++++. |+++++++|+.+..+..... .
T Consensus 103 ~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~ 178 (317)
T 3ajr_A 103 R-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGT 178 (317)
T ss_dssp T-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCS
T ss_pred C-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcc
Confidence 2 47999999988752210 1246789999999999999988764 79999999776665432110 0
Q ss_pred ch---HHHHHHHHhhc-C-CC------CCCCCchhHHHHHHHhccCCC-CcccceEEEecCC
Q 027744 158 GQ---ERAVKLVREAA-P-LH------RWLDVKNDLASTVIYLISDGS-RYMTGTTIYVDGA 207 (219)
Q Consensus 158 ~~---~~~~~~~~~~~-~-~~------~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgG 207 (219)
.. ........... + .. .+... +|+|++++.++.... ...+|+++++.|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 179 TDYAVEIFYYAVKREKYKCYLAPNRALPMMYM-PDALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp STHHHHHHHHHHTTCCEEECSCTTCCEEEEEH-HHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred hhHHHHHHHHHHhCCCceeecCccceeeeeEH-HHHHHHHHHHHhCCccccccCceEecCCc
Confidence 01 11111111110 0 00 11223 499999988875432 2235788999864
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.37 E-value=7.6e-12 Score=94.00 Aligned_cols=166 Identities=10% Similarity=0.046 Sum_probs=97.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. ++ +.++++|++||+||.. ... ..+| +..++.+++.+++
T Consensus 42 ~~~~~~~~D~~d~--~~---------~~~~~~d~vi~~ag~~-~~~-------------~~~~----~~~~~~l~~a~~~ 92 (221)
T 3ew7_A 42 KDINILQKDIFDL--TL---------SDLSDQNVVVDAYGIS-PDE-------------AEKH----VTSLDHLISVLNG 92 (221)
T ss_dssp SSSEEEECCGGGC--CH---------HHHTTCSEEEECCCSS-TTT-------------TTSH----HHHHHHHHHHHCS
T ss_pred CCCeEEeccccCh--hh---------hhhcCCCEEEECCcCC-ccc-------------cchH----HHHHHHHHHHHHh
Confidence 4688999999998 65 2346799999999974 210 2223 4455666666666
Q ss_pred cCCCCeEEEeecccccccCC----------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 89 SKAGGSIVFLTSIIGAERGL----------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~----------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
.+ .+++|++||..+....+ ..+...|+.+|.+.+.+. .+.. ...|+++++++||.+.++......
T Consensus 93 ~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~- 167 (221)
T 3ew7_A 93 TV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGD- 167 (221)
T ss_dssp CC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------
T ss_pred cC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCc-
Confidence 54 68999999987642211 113456999999998873 2222 156899999999999987221100
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
................+..++ |+|++++.++... ...|+.+++.+.....
T Consensus 168 ~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~--~~~g~~~~~~~~~~~~ 217 (221)
T 3ew7_A 168 YQIGKDHLLFGSDGNSFISME-DYAIAVLDEIERP--NHLNEHFTVAGKLEHH 217 (221)
T ss_dssp ----------------CCCHH-HHHHHHHHHHHSC--SCTTSEEECCC-----
T ss_pred eEeccccceecCCCCceEeHH-HHHHHHHHHHhCc--cccCCEEEECCCCccc
Confidence 000000000000112245555 9999999999654 3569999998876554
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=4.2e-12 Score=99.38 Aligned_cols=165 Identities=18% Similarity=0.120 Sum_probs=113.6
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
++|++|. +++.++++.. ++|++||+||.... ....++++..+++|+.++..+++++... +.+
T Consensus 39 ~~D~~d~--~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~ 100 (287)
T 3sc6_A 39 LLDITNI--SQVQQVVQEI-----RPHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAK 100 (287)
T ss_dssp TSCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCE
T ss_pred ccCCCCH--HHHHHHHHhc-----CCCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCe
Confidence 4799998 8888887765 68999999997521 1122467889999999999999998543 358
Q ss_pred EEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 95 IVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 95 iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+|++||...+... +..+...|+.+|.+.+.+++.++. +...++|+.+.++....... .....
T Consensus 101 ~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~--~~~~~ 171 (287)
T 3sc6_A 101 LVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK--TMIRL 171 (287)
T ss_dssp EEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH--HHHHH
T ss_pred EEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH--HHHHH
Confidence 9999998765211 123467899999999999987644 45899999998875432211 11111
Q ss_pred HHhhcCCC-------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 166 VREAAPLH-------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 166 ~~~~~~~~-------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.....+.. .+..++ |+|+++++++.... ++++++.+|..++
T Consensus 172 ~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~~----~~~~~i~~~~~~s 219 (287)
T 3sc6_A 172 GKEREEISVVADQIGSPTYVA-DLNVMINKLIHTSL----YGTYHVSNTGSCS 219 (287)
T ss_dssp HTTCSEEEEECSCEECCEEHH-HHHHHHHHHHTSCC----CEEEECCCBSCEE
T ss_pred HHcCCCeEeecCcccCceEHH-HHHHHHHHHHhCCC----CCeEEEcCCCccc
Confidence 11122211 122344 99999999997543 6799999887543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-11 Score=103.94 Aligned_cols=172 Identities=12% Similarity=0.023 Sum_probs=117.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|+++. +++. ...++|+|||+|+... ....++..+.+|+.++..+++.+..
T Consensus 210 ~~~v~~v~~Dl~d~--~~l~--------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~--- 268 (508)
T 4f6l_B 210 LSNIEVIVGDFECM--DDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ--- 268 (508)
T ss_dssp STTEEEEEEBTTBC--SSCC--------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT---
T ss_pred cCceEEEecCCccc--ccCC--------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh---
Confidence 35799999999997 6665 3468999999999752 1235677789999999999998865
Q ss_pred hcCCCCeEEEeecccc--ccc-----------C---CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIG--AER-----------G---LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~--~~~-----------~---~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
. .+++|++||... ... . +..+...|+.+|.+.+.+++.+++ .|+++++++||.+.++
T Consensus 269 --~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~ 341 (508)
T 4f6l_B 269 --H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSP 341 (508)
T ss_dssp --T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESC
T ss_pred --C-CCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccC
Confidence 2 578999999876 100 0 012567899999999999998754 5899999999999988
Q ss_pred CCccccc----hHHHHHHHHhhcCCCC-----------CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 152 EYPIAVG----QERAVKLVREAAPLHR-----------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 152 ~~~~~~~----~~~~~~~~~~~~~~~~-----------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
....... ..............+. +... +|+|+++++++.... .|+++++.+|..+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v-~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s 412 (508)
T 4f6l_B 342 YNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFV-DTTARQIVALAQVNT---PQIIYHVLSPNKMP 412 (508)
T ss_dssp SSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEH-HHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred CCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcH-HHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence 6544311 1112222222222221 2223 599999999997543 78999999987654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-14 Score=106.02 Aligned_cols=158 Identities=11% Similarity=0.066 Sum_probs=110.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.+++ +|++||+||.... +.++++..+++|+.++..+++++.+
T Consensus 46 ~~~~~~~~D~~~~--~~~~~~~---------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~---- 103 (215)
T 2a35_A 46 PRLDNPVGPLAEL--LPQLDGS---------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE---- 103 (215)
T ss_dssp TTEECCBSCHHHH--GGGCCSC---------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----
T ss_pred CCceEEeccccCH--HHHHHhh---------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----
Confidence 4677889999987 6665543 8999999997421 2346788899999999999988754
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeE-EEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIR-VNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
.+ .++||++||..++ . ++...|+.+|.+++.+++. .|++ ++.++||.+.++........... .
T Consensus 104 ~~-~~~~v~~Ss~~~~-~---~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~----~ 167 (215)
T 2a35_A 104 MG-ARHYLVVSALGAD-A---KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILA----A 167 (215)
T ss_dssp TT-CCEEEEECCTTCC-T---TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTT----C
T ss_pred cC-CCEEEEECCcccC-C---CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHH----H
Confidence 22 4789999998775 2 4456899999999998875 3798 99999999998864321110000 0
Q ss_pred hhcCC----CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPL----HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...+. ..+..+ +|+|++++.++.... ++.+++.++..
T Consensus 168 ~~~~~~~~~~~~i~~-~Dva~~~~~~~~~~~----~~~~~i~~~~~ 208 (215)
T 2a35_A 168 PIARILPGKYHGIEA-CDLARALWRLALEEG----KGVRFVESDEL 208 (215)
T ss_dssp CCC----CHHHHHHH-HHHHHHHHHHHTCCC----SEEEEEEHHHH
T ss_pred hhhhccCCCcCcEeH-HHHHHHHHHHHhcCC----CCceEEcHHHH
Confidence 00010 011233 499999999996532 77888877653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-12 Score=102.08 Aligned_cols=170 Identities=13% Similarity=0.012 Sum_probs=113.8
Q ss_pred EEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 14 VGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 14 ~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
+.+|++|. +++.++++.. ++|++||+||..... ...++++..+++|+.++.++++++.. . +.
T Consensus 36 ~~~D~~d~--~~~~~~~~~~-----~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~ 97 (299)
T 1n2s_A 36 FCGDFSNP--KGVAETVRKL-----RPDVIVNAAAHTAVD-----KAESEPELAQLLNATSVEAIAKAANE----T--GA 97 (299)
T ss_dssp SCCCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCHH-----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TC
T ss_pred ccccCCCH--HHHHHHHHhc-----CCCEEEECcccCCHh-----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CC
Confidence 35899998 8887777653 589999999974210 12345678899999999999998743 2 34
Q ss_pred eEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 94 SIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 94 ~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++|++||...+... +..+...|+.+|.+.+.+++.++. ++++++||.+.++...... . ....
T Consensus 98 ~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~-~-~~~~ 168 (299)
T 1n2s_A 98 WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA-K-TMLR 168 (299)
T ss_dssp EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH-H-HHHH
T ss_pred cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH-H-HHHH
Confidence 89999998765211 112356899999999999987642 7899999999987654211 1 1111
Q ss_pred HHHhhcCCC-------CCCCCchhHHHHHHHhccCCCCcc-cceEEEecCCcccc
Q 027744 165 LVREAAPLH-------RWLDVKNDLASTVIYLISDGSRYM-TGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~-------~~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~dgG~~~~ 211 (219)
......+.. .+...+ |+|++++.++....... .|+++++.+|..++
T Consensus 169 ~~~~~~~~~~~~~~~~~~i~v~-Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 222 (299)
T 1n2s_A 169 LAKERQTLSVINDQYGAPTGAE-LLADCTAHAIRVALNKPEVAGLYHLVAGGTTT 222 (299)
T ss_dssp HHHHCSEEEEECSCEECCEEHH-HHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred HHhcCCCEEeecCcccCCeeHH-HHHHHHHHHHHHhccccccCceEEEeCCCCCC
Confidence 111222211 122244 99999999986432122 58999999887543
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.6e-11 Score=96.24 Aligned_cols=176 Identities=11% Similarity=0.065 Sum_probs=116.7
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. +++.+++++. ++|+|||+|+.... .....++++..+++|+.++..+++++.. .+ .++
T Consensus 38 ~~D~~d~--~~~~~~~~~~-----~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~ 101 (321)
T 1e6u_A 38 ELNLLDS--RAVHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNK 101 (321)
T ss_dssp TCCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCE
T ss_pred cCCccCH--HHHHHHHHhc-----CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCe
Confidence 3689988 7877777653 69999999997421 1123455678899999999999988765 22 469
Q ss_pred EEEeecccccccC-------------CCCC-cchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc----
Q 027744 95 IVFLTSIIGAERG-------------LYPG-AAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA---- 156 (219)
Q Consensus 95 iv~iss~~~~~~~-------------~~~~-~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~---- 156 (219)
+|++||...+... +..+ ...|+.+|.+.+.+++.++++. |+++++++||.+.++.....
T Consensus 102 ~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~ 178 (321)
T 1e6u_A 102 LLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNS 178 (321)
T ss_dssp EEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCS
T ss_pred EEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCC
Confidence 9999998765210 1112 3589999999999999998765 79999999999998765421
Q ss_pred -cchHHHHHHHHh---h-cCC---C------CCCCCchhHHHHHHHhccCCCCc------ccceEEEecCCccc
Q 027744 157 -VGQERAVKLVRE---A-APL---H------RWLDVKNDLASTVIYLISDGSRY------MTGTTIYVDGAQSI 210 (219)
Q Consensus 157 -~~~~~~~~~~~~---~-~~~---~------~~~~~~~dva~~~~~l~s~~~~~------~~G~~i~~dgG~~~ 210 (219)
............ . .+. + .+... +|+|++++.++...... ..|+++++.+|..+
T Consensus 179 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v-~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~ 251 (321)
T 1e6u_A 179 HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHV-DDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDC 251 (321)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEH-HHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCE
T ss_pred ccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEH-HHHHHHHHHHHhCcccccccccccCCceEEeCCCCCc
Confidence 111111111110 0 111 1 12233 49999999988643211 23789999887654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.8e-12 Score=94.96 Aligned_cols=160 Identities=9% Similarity=-0.016 Sum_probs=100.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. ++ +.++++|+|||+||...... . ..+|+.++ +.+++.+++
T Consensus 43 ~~~~~~~~D~~d~--~~---------~~~~~~d~vi~~ag~~~~~~-----~-------~~~n~~~~----~~l~~a~~~ 95 (224)
T 3h2s_A 43 ATVATLVKEPLVL--TE---------ADLDSVDAVVDALSVPWGSG-----R-------GYLHLDFA----THLVSLLRN 95 (224)
T ss_dssp TTSEEEECCGGGC--CH---------HHHTTCSEEEECCCCCTTSS-----C-------THHHHHHH----HHHHHTCTT
T ss_pred CCceEEecccccc--cH---------hhcccCCEEEECCccCCCcc-----h-------hhHHHHHH----HHHHHHHHH
Confidence 4788999999998 65 23467999999999741110 1 23455555 444444555
Q ss_pred cCCCCeEEEeecccccccCCCC------------CcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc
Q 027744 89 SKAGGSIVFLTSIIGAERGLYP------------GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~------------~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~ 156 (219)
. ++++|++||..+....+.. +...|+.+|.+.+.+. ......|++++.++||.+.++.....
T Consensus 96 ~--~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~----~~~~~~~i~~~ivrp~~v~g~~~~~~ 169 (224)
T 3h2s_A 96 S--DTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQ----FLQMNANVNWIGISPSEAFPSGPATS 169 (224)
T ss_dssp C--CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHH----HHTTCTTSCEEEEEECSBCCCCCCCC
T ss_pred c--CCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHH----HHHhcCCCcEEEEcCccccCCCcccC
Confidence 4 3899999998665222110 1678999999998542 22245789999999999998732211
Q ss_pred cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 157 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
..... ...........+..++ |+|++++.++... ...|+++++.+
T Consensus 170 ~~~~~--~~~~~~~~~~~~i~~~-DvA~~~~~~l~~~--~~~g~~~~~~~ 214 (224)
T 3h2s_A 170 YVAGK--DTLLVGEDGQSHITTG-NMALAILDQLEHP--TAIRDRIVVRD 214 (224)
T ss_dssp EEEES--SBCCCCTTSCCBCCHH-HHHHHHHHHHHSC--CCTTSEEEEEE
T ss_pred ceecc--cccccCCCCCceEeHH-HHHHHHHHHhcCc--cccCCEEEEec
Confidence 10000 0000001112345565 9999999999753 34689888854
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-12 Score=104.68 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=108.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|+|||+|+.. .. . ..+..++.+++|+.++.++++++.+..
T Consensus 59 ~~~~~~~~Dl~d~--~~~~~~~~-------~~D~Vih~A~~~-~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~-- 121 (338)
T 2rh8_A 59 GDLKIFRADLTDE--LSFEAPIA-------GCDFVFHVATPV-HF---A--SEDPENDMIKPAIQGVVNVMKACTRAK-- 121 (338)
T ss_dssp SCEEEEECCTTTS--SSSHHHHT-------TCSEEEEESSCC-CC--------------CHHHHHHHHHHHHHHHHCT--
T ss_pred CcEEEEecCCCCh--HHHHHHHc-------CCCEEEEeCCcc-CC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 3678899999998 77776654 589999999864 11 1 112224588999999999999987532
Q ss_pred cCCCCeEEEeecccccc----cC---CC---------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC
Q 027744 89 SKAGGSIVFLTSIIGAE----RG---LY---------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~----~~---~~---------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG 146 (219)
+ .++||++||..+.. .+ +. +....|+.+|.+.+.+++.++++. |+++++++||
T Consensus 122 -~-v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~ 196 (338)
T 2rh8_A 122 -S-VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPT 196 (338)
T ss_dssp -T-CCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEEC
T ss_pred -C-cCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCC
Confidence 1 37899999976321 00 00 011259999999999998877653 7999999999
Q ss_pred CccCCCCccccchHH--HH-------HHHH--hh----cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 147 LHLQDEYPIAVGQER--AV-------KLVR--EA----APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 147 ~v~t~~~~~~~~~~~--~~-------~~~~--~~----~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.+.++.......... .. .... .. .....+..++ |+|++++++++.. ..+|. +++.+
T Consensus 197 ~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~-Dva~a~~~~~~~~--~~~~~-~~~~~ 267 (338)
T 2rh8_A 197 LMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVE-DVCRAHIFVAEKE--SASGR-YICCA 267 (338)
T ss_dssp EEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHH-HHHHHHHHHHHCT--TCCEE-EEECS
T ss_pred ceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHH-HHHHHHHHHHcCC--CcCCc-EEEec
Confidence 999987543222110 00 0000 00 0001356666 9999999998642 23455 44433
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.5e-13 Score=104.01 Aligned_cols=165 Identities=13% Similarity=0.014 Sum_probs=110.6
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ +++|++||+||.. ..+++..+++|+.++..+++++. +
T Consensus 41 ~~~~~~~~Dl~d~--~~~~~~~~------~~~d~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~----~ 98 (286)
T 3gpi_A 41 AGVQTLIADVTRP--DTLASIVH------LRPEILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALE----G 98 (286)
T ss_dssp TTCCEEECCTTCG--GGCTTGGG------GCCSEEEECHHHH----------HHC-----CCSHHHHHHHHHHTT----T
T ss_pred cCCceEEccCCCh--HHHHHhhc------CCCCEEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHh----h
Confidence 5688899999998 88777654 3699999999863 23456778899999988888875 2
Q ss_pred cCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 89 SKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
.+ .+++|++||...+.. .+..+...|+.+|.+.+.+ +.. +++++++|+.+.++.....
T Consensus 99 ~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~--- 165 (286)
T 3gpi_A 99 AP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRM--- 165 (286)
T ss_dssp SC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHH---
T ss_pred CC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhH---
Confidence 22 479999999876421 1123467899999999988 542 7899999999988765421
Q ss_pred HHHHHHHH-hh----cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVR-EA----APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~-~~----~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...... .. .....+... +|+|++++.++........|+++++.+|..++
T Consensus 166 --~~~~~~~~~~~~~~~~~~~i~v-~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s 219 (286)
T 3gpi_A 166 --IRQAQTPEQWPARNAWTNRIHR-DDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP 219 (286)
T ss_dssp --HHHTTCGGGSCSSBCEECEEEH-HHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE
T ss_pred --HHHHHhcccCCCcCceeEEEEH-HHHHHHHHHHHhhhccCCCCceEEEeCCCCCC
Confidence 111110 00 011122333 49999999999753224568999999887543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.21 E-value=9.6e-11 Score=91.51 Aligned_cols=157 Identities=11% Similarity=0.043 Sum_probs=105.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|++||+|+.. . . + ++|+.++.++++++.. .
T Consensus 46 ~~~~~~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~-~-------~-~------~~n~~~~~~l~~a~~~----~ 97 (287)
T 2jl1_A 46 GVEVRHGDYNQP--ESLQKAFA-------GVSKLLFISGPH-Y-------D-N------TLLIVQHANVVKAARD----A 97 (287)
T ss_dssp TCEEEECCTTCH--HHHHHHTT-------TCSEEEECCCCC-S-------C-H------HHHHHHHHHHHHHHHH----T
T ss_pred CCeEEEeccCCH--HHHHHHHh-------cCCEEEEcCCCC-c-------C-c------hHHHHHHHHHHHHHHH----c
Confidence 578899999998 77766654 589999999852 1 1 1 5678888887777643 3
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH---
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV--- 166 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--- 166 (219)
+ -++||++||..+. .. ...|+.+|.+.+.+++. .|++++.++||.+.++....... .......
T Consensus 98 ~-~~~~v~~Ss~~~~-~~----~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~-~~~~~~~~~~ 163 (287)
T 2jl1_A 98 G-VKHIAYTGYAFAE-ES----IIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLR-ASTESGAIVT 163 (287)
T ss_dssp T-CSEEEEEEETTGG-GC----CSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGH-HHHHHTEEEE
T ss_pred C-CCEEEEECCCCCC-CC----CCchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHH-HHhhCCceec
Confidence 2 4799999998765 21 24899999999998863 58999999999877654221111 1110000
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........+..++ |+|++++.++... ..+|++++++||..++
T Consensus 164 ~~~~~~~~~i~~~-Dva~~~~~~~~~~--~~~g~~~~i~~~~~~s 205 (287)
T 2jl1_A 164 NAGSGIVNSVTRN-ELALAAATVLTEE--GHENKTYNLVSNQPWT 205 (287)
T ss_dssp SCTTCCBCCBCHH-HHHHHHHHHHTSS--SCTTEEEEECCSSCBC
T ss_pred cCCCCccCccCHH-HHHHHHHHHhcCC--CCCCcEEEecCCCcCC
Confidence 0001112344555 9999999999653 2478999999986544
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.20 E-value=3e-10 Score=95.30 Aligned_cols=176 Identities=18% Similarity=0.094 Sum_probs=112.9
Q ss_pred cceEEEEecCCccc----hhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDR----EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~----~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.++.++.+|+++.+ .+++..+++ ++|+|||+||.... +.++..+.+|+.++.++++.+..
T Consensus 140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~ 203 (478)
T 4dqv_A 140 DRLEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALT 203 (478)
T ss_dssp TTEEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTS
T ss_pred CceEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999541 034444443 48999999998632 22345688999999999888753
Q ss_pred HHHhcCCCCeEEEeecccccccCCC--------------------CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEee
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLY--------------------PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIA 144 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~--------------------~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~ 144 (219)
.+ .++||++||...+..... .....|+.+|.+.+.+++.++++. |+++++++
T Consensus 204 ----~~-~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivR 275 (478)
T 4dqv_A 204 ----TK-LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFR 275 (478)
T ss_dssp ----SS-CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEE
T ss_pred ----CC-CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEE
Confidence 22 468999999765421000 001349999999999999998865 79999999
Q ss_pred cCCccCCCC--ccccchHHHHHHHH-----hhcCCC---------------CCCCCchhHHHHHHHhccCC--CCcccce
Q 027744 145 RGLHLQDEY--PIAVGQERAVKLVR-----EAAPLH---------------RWLDVKNDLASTVIYLISDG--SRYMTGT 200 (219)
Q Consensus 145 pG~v~t~~~--~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~dva~~~~~l~s~~--~~~~~G~ 200 (219)
||.|.++.. .............. ...|.. .+... +|+|++++.++... .....|+
T Consensus 276 pg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~v-dDvA~ai~~~~~~~~~~~~~~~~ 354 (478)
T 4dqv_A 276 CGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPV-TFVAEAIAVLGARVAGSSLAGFA 354 (478)
T ss_dssp ECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEH-HHHHHHHHHHHHTTC-CCCCSEE
T ss_pred CceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeH-HHHHHHHHHHHhhcccCCCCCCc
Confidence 999987632 11111111111111 111211 11222 59999999887531 1234589
Q ss_pred EEEecCCcc
Q 027744 201 TIYVDGAQS 209 (219)
Q Consensus 201 ~i~~dgG~~ 209 (219)
++++.++..
T Consensus 355 ~ynv~~~~~ 363 (478)
T 4dqv_A 355 TYHVMNPHD 363 (478)
T ss_dssp EEEESCCCC
T ss_pred eEEecCCCC
Confidence 999988764
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-10 Score=90.63 Aligned_cols=168 Identities=14% Similarity=0.068 Sum_probs=116.2
Q ss_pred eEEEEecC-CccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 11 VEVVGLDM-EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 11 ~~~~~~Dl-~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+.++.+|. +|. +++.++++ ++|++||+||...+ ++++..+++|+.++..+++++. +.
T Consensus 26 ~~v~~~d~~~d~--~~l~~~~~-------~~d~Vih~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~----~~ 83 (369)
T 3st7_A 26 HHIFEVHRQTKE--EELESALL-------KADFIVHLAGVNRP---------EHDKEFSLGNVSYLDHVLDILT----RN 83 (369)
T ss_dssp CEEEECCTTCCH--HHHHHHHH-------HCSEEEECCCSBCT---------TCSTTCSSSCCBHHHHHHHHHT----TC
T ss_pred CEEEEECCCCCH--HHHHHHhc-------cCCEEEECCcCCCC---------CCHHHHHHHHHHHHHHHHHHHH----Hh
Confidence 47889999 887 88877776 38999999997532 1234457889999998888863 33
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVR 167 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~ 167 (219)
+...++|++||...+ . ...|+.+|.+.+.+++.++++. |+++.+++|+.+.++....... -........
T Consensus 84 ~~~~~~v~~Ss~~~~-~-----~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~ 154 (369)
T 3st7_A 84 TKKPAILLSSSIQAT-Q-----DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIA 154 (369)
T ss_dssp SSCCEEEEEEEGGGG-S-----CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHH
T ss_pred CCCCeEEEeCchhhc-C-----CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHH
Confidence 312489999998775 2 5689999999999999998875 7899999999998876543211 111111111
Q ss_pred hhcCCCC--------CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHR--------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~--------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+..- +... +|+|++++.++..... ..|+++++.+|..++
T Consensus 155 ~~~~~~~~~~~~~~~~i~v-~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~s 204 (369)
T 3st7_A 155 RNEEIQVNDRNVELTLNYV-DDIVAEIKRAIEGTPT-IENGVPTVPNVFKVT 204 (369)
T ss_dssp TTCCCCCSCTTCEEEEEEH-HHHHHHHHHHHHTCCC-EETTEECCSCCEEEE
T ss_pred cCCCeEecCCCeEEEEEEH-HHHHHHHHHHHhCCcc-cCCceEEeCCCCcee
Confidence 2222211 1223 5999999999975432 248899998886543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-10 Score=91.11 Aligned_cols=150 Identities=11% Similarity=0.079 Sum_probs=98.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|++||+|+.. . ..|+.++..+++++. +.
T Consensus 45 ~~~~~~~D~~d~--~~~~~~~~-------~~d~vi~~a~~~-~----------------~~~~~~~~~l~~a~~----~~ 94 (286)
T 2zcu_A 45 GITVRQADYGDE--AALTSALQ-------GVEKLLLISSSE-V----------------GQRAPQHRNVINAAK----AA 94 (286)
T ss_dssp TCEEEECCTTCH--HHHHHHTT-------TCSEEEECC-------------------------CHHHHHHHHHH----HH
T ss_pred CCeEEEcCCCCH--HHHHHHHh-------CCCEEEEeCCCC-c----------------hHHHHHHHHHHHHHH----Hc
Confidence 578899999998 77766653 589999999852 1 025666666665553 33
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH-h
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR-E 168 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~ 168 (219)
+ -++||++||..++ . ....|+.+|.+.+.+++. .|++++.++||++.++.... ...... .
T Consensus 95 ~-~~~~v~~Ss~~~~-~----~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~------~~~~~~~~ 155 (286)
T 2zcu_A 95 G-VKFIAYTSLLHAD-T----SPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLAS------APAALEHG 155 (286)
T ss_dssp T-CCEEEEEEETTTT-T----CCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTT------HHHHHHHT
T ss_pred C-CCEEEEECCCCCC-C----CcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHH------hHHhhcCC
Confidence 3 4799999998775 2 224799999999998864 47999999999876543210 011110 1
Q ss_pred hc------CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 169 AA------PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ~~------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. ....+..++ |+|++++.+++... .+|++++++||..++
T Consensus 156 ~~~~~~~~~~~~~i~~~-Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s 201 (286)
T 2zcu_A 156 VFIGAAGDGKIASATRA-DYAAAAARVISEAG--HEGKVYELAGDSAWT 201 (286)
T ss_dssp EEEESCTTCCBCCBCHH-HHHHHHHHHHHSSS--CTTCEEEECCSSCBC
T ss_pred ceeccCCCCccccccHH-HHHHHHHHHhcCCC--CCCceEEEeCCCcCC
Confidence 11 122344555 99999999997532 479999999986543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.08 E-value=9.9e-10 Score=86.94 Aligned_cols=154 Identities=9% Similarity=-0.004 Sum_probs=101.4
Q ss_pred CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC---------CC
Q 027744 39 NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------LY 109 (219)
Q Consensus 39 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~---------~~ 109 (219)
++|++||+|+...... ..++....+. |+.++.++++++... + -++||++||...+... +.
T Consensus 69 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E~~~~ 137 (321)
T 3vps_A 69 DVRLVYHLASHKSVPR-----SFKQPLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPEDSPL 137 (321)
T ss_dssp TEEEEEECCCCCCHHH-----HTTSTTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred cCCEEEECCccCChHH-----HHhCHHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence 6999999999752110 0111223355 888988888887543 2 3689999998765211 12
Q ss_pred CCcchhHHhHHHHHHHHHHHHHHhCCCCe-EEEEeecCCccCCCCccccchHHHHHHHHhhcCCC---------CCCCCc
Q 027744 110 PGAAAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH---------RWLDVK 179 (219)
Q Consensus 110 ~~~~~y~~sK~a~~~l~~~l~~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 179 (219)
.+...|+.+|.+.+.+++.++++ .|+ ++++++|+.+.++...................+.. .+...
T Consensus 138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v- 213 (321)
T 3vps_A 138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYI- 213 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEH-
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEH-
Confidence 34678999999999999998876 478 99999999999876553211111111111222211 12234
Q ss_pred hhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 180 NDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 180 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+|+|++++.++.... .| ++++.+|..++
T Consensus 214 ~Dva~~~~~~~~~~~---~g-~~~i~~~~~~s 241 (321)
T 3vps_A 214 TDVVDKLVALANRPL---PS-VVNFGSGQSLS 241 (321)
T ss_dssp HHHHHHHHHGGGSCC---CS-EEEESCSCCEE
T ss_pred HHHHHHHHHHHhcCC---CC-eEEecCCCccc
Confidence 499999999997643 37 99999987543
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.3e-09 Score=95.41 Aligned_cols=126 Identities=10% Similarity=0.104 Sum_probs=93.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.+++++. ++|+|||+||... .. ...+..+..+++|+.++..+++++..
T Consensus 61 ~~v~~v~~Dl~d~--~~l~~~~~~~-----~~D~Vih~A~~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~a~~~---- 124 (699)
T 1z45_A 61 HHIPFYEVDLCDR--KGLEKVFKEY-----KIDSVIHFAGLKA-VG----ESTQIPLRYYHNNILGTVVLLELMQQ---- 124 (699)
T ss_dssp SCCCEEECCTTCH--HHHHHHHHHS-----CCCEEEECCSCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CceEEEEcCCCCH--HHHHHHHHhC-----CCCEEEECCcccC-cC----ccccCHHHHHHHHHHHHHHHHHHHHH----
Confidence 4678899999998 8887777642 6999999999752 11 11233466889999999999876643
Q ss_pred cCCCCeEEEeecccccccC-------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 89 SKAGGSIVFLTSIIGAERG-------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~-------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
.+ .++||++||...+... +..+...|+.+|++++.+++.++.+. ..|+++.+++|+.+.++.
T Consensus 125 ~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~ 199 (699)
T 1z45_A 125 YN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH 199 (699)
T ss_dssp HT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred cC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence 23 4799999998764110 11245789999999999999998875 458999999998877653
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.5e-10 Score=88.97 Aligned_cols=162 Identities=14% Similarity=0.014 Sum_probs=98.8
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|++|. +++.++++ ++|++||+++..... . ...|+. ..+.+++.+++.
T Consensus 52 ~~~~~~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~~~~------~-------~~~~~~----~~~~~~~aa~~~ 105 (299)
T 2wm3_A 52 GAEVVQGDQDDQ--VIMELALN-------GAYATFIVTNYWESC------S-------QEQEVK----QGKLLADLARRL 105 (299)
T ss_dssp TCEEEECCTTCH--HHHHHHHT-------TCSEEEECCCHHHHT------C-------HHHHHH----HHHHHHHHHHHH
T ss_pred CCEEEEecCCCH--HHHHHHHh-------cCCEEEEeCCCCccc------c-------chHHHH----HHHHHHHHHHHc
Confidence 578899999998 77776654 589999999853110 1 123333 344445555554
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH-HHHh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK-LVRE 168 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~ 168 (219)
+ -++||+.|+..............|+.+|.+++.+++. .|+++++++||++.+++............ ...-
T Consensus 106 g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~ 177 (299)
T 2wm3_A 106 G-LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLL 177 (299)
T ss_dssp T-CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEE
T ss_pred C-CCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEE
Confidence 4 5789997665433111112346899999999988874 37999999999988765431111000000 0000
Q ss_pred hcCCC----CCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 169 AAPLH----RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 169 ~~~~~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
..+.+ .+..++ |+|++++.++.... ...|++++++|.
T Consensus 178 ~~~~~~~~~~~i~~~-Dva~~~~~~l~~~~-~~~g~~~~~~g~ 218 (299)
T 2wm3_A 178 SLPTGDVPMDGMSVS-DLGPVVLSLLKMPE-KYVGQNIGLSTC 218 (299)
T ss_dssp CCCCTTSCEEEECGG-GHHHHHHHHHHSHH-HHTTCEEECCSE
T ss_pred EecCCCCccceecHH-HHHHHHHHHHcChh-hhCCeEEEeeec
Confidence 01111 234555 99999999986422 236899999863
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.4e-08 Score=77.84 Aligned_cols=155 Identities=11% Similarity=0.075 Sum_probs=98.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. + +.++|++||+|+..... .. ..+.++..+++
T Consensus 47 ~~~~~~~~D~~d~--~------------~~~~d~vi~~a~~~~~~------~~----------------~~~~l~~a~~~ 90 (286)
T 3ius_A 47 SGAEPLLWPGEEP--S------------LDGVTHLLISTAPDSGG------DP----------------VLAALGDQIAA 90 (286)
T ss_dssp TTEEEEESSSSCC--C------------CTTCCEEEECCCCBTTB------CH----------------HHHHHHHHHHH
T ss_pred CCCeEEEeccccc--c------------cCCCCEEEECCCccccc------cH----------------HHHHHHHHHHh
Confidence 3578899999986 4 35799999999975221 11 11334444444
Q ss_pred --cCCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 89 --SKAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 89 --~~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.+ .+++|++||...+... +..+...|+.+|.+.+.+++.+ .|+++++++||.+.++......
T Consensus 91 ~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~ 163 (286)
T 3ius_A 91 RAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFS 163 (286)
T ss_dssp TGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSST
T ss_pred hcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHH
Confidence 22 4799999998654111 1233467999999999999876 5899999999999887533210
Q ss_pred c--hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 G--QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
. ........ .......+... +|+|++++.++.... .|+++++.+|..++
T Consensus 164 ~~~~~~~~~~~-~~~~~~~~i~v-~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s 214 (286)
T 3ius_A 164 KLGKGGIRRII-KPGQVFSRIHV-EDIAQVLAASMARPD---PGAVYNVCDDEPVP 214 (286)
T ss_dssp TSSSSCCCEEE-CTTCCBCEEEH-HHHHHHHHHHHHSCC---TTCEEEECCSCCBC
T ss_pred HHhcCCccccC-CCCcccceEEH-HHHHHHHHHHHhCCC---CCCEEEEeCCCCcc
Confidence 0 00000000 00011122233 499999999997543 68999999887654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.2e-09 Score=82.27 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=92.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+||.... . ..|+.++ +.+++.+++
T Consensus 44 ~~v~~~~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~~~--------~-------~~~~~~~----~~l~~aa~~ 95 (289)
T 3e48_A 44 GKVSVRQLDYFNQ--ESMVEAFK-------GMDTVVFIPSIIHP--------S-------FKRIPEV----ENLVYAAKQ 95 (289)
T ss_dssp TTBEEEECCTTCH--HHHHHHTT-------TCSEEEECCCCCCS--------H-------HHHHHHH----HHHHHHHHH
T ss_pred CCCEEEEcCCCCH--HHHHHHHh-------CCCEEEEeCCCCcc--------c-------hhhHHHH----HHHHHHHHH
Confidence 4688999999998 77766654 68999999987421 1 1244343 445555555
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
.+ -++||++||....... .|..++... .+.+.+...|++++.++||++.+++... .......
T Consensus 96 ~g-v~~iv~~Ss~~~~~~~------~~~~~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~------~~~~~~~ 157 (289)
T 3e48_A 96 SG-VAHIIFIGYYADQHNN------PFHMSPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPY------LPELMNM 157 (289)
T ss_dssp TT-CCEEEEEEESCCSTTC------CSTTHHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHH------HHHHHHH
T ss_pred cC-CCEEEEEcccCCCCCC------CCccchhHH-----HHHHHHHHcCCCEEEEeccccccccHHH------HHHHHHC
Confidence 44 5799999996543111 122222111 2222333458999999999998764321 1111111
Q ss_pred hc---CCCC----CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 169 AA---PLHR----WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 169 ~~---~~~~----~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.. +.+. +..++ |+|++++.+++.... .|++++++ |..++
T Consensus 158 ~~~~~~~g~~~~~~i~~~-Dva~~~~~~l~~~~~--~g~~~~~~-~~~~s 203 (289)
T 3e48_A 158 HKLIYPAGDGRINYITRN-DIARGVIAIIKNPDT--WGKRYLLS-GYSYD 203 (289)
T ss_dssp TEECCCCTTCEEEEECHH-HHHHHHHHHHHCGGG--TTCEEEEC-CEEEE
T ss_pred CCEecCCCCceeeeEEHH-HHHHHHHHHHcCCCc--CCceEEeC-CCcCC
Confidence 11 2211 34455 999999999976443 38999999 76544
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=9.1e-08 Score=76.99 Aligned_cols=175 Identities=11% Similarity=0.052 Sum_probs=106.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.++++.. +++|++||+||.. . .+++..+++|+.++.++++++.+...
T Consensus 48 ~~~~~~~~Dl~d~--~~~~~~~~~~----~~~d~vih~a~~~-~---------~~~~~~~~~n~~~~~~l~~a~~~~~~- 110 (364)
T 2v6g_A 48 NPINYVQCDISDP--DDSQAKLSPL----TDVTHVFYVTWAN-R---------STEQENCEANSKMFRNVLDAVIPNCP- 110 (364)
T ss_dssp SCCEEEECCTTSH--HHHHHHHTTC----TTCCEEEECCCCC-C---------SSHHHHHHHHHHHHHHHHHHHTTTCT-
T ss_pred CceEEEEeecCCH--HHHHHHHhcC----CCCCEEEECCCCC-c---------chHHHHHHHhHHHHHHHHHHHHHhcc-
Confidence 4688999999998 7776665432 2499999999974 1 13567889999999999998865321
Q ss_pred cCCCCeEE-------EeecccccccC-----C-------CCCcchhHHhHHHHHHHHHHHHHHhCCCC-eEEEEeecCCc
Q 027744 89 SKAGGSIV-------FLTSIIGAERG-----L-------YPGAAAYGACAASIHQLVRTAAMEIGKHK-IRVNGIARGLH 148 (219)
Q Consensus 89 ~~~~g~iv-------~iss~~~~~~~-----~-------~~~~~~y~~sK~a~~~l~~~l~~e~~~~g-i~v~~i~pG~v 148 (219)
+ -.++| ++||...+... + .+....|. +.+.+++.+++ ..| +++.+++|+.+
T Consensus 111 -~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v 181 (364)
T 2v6g_A 111 -N-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNI 181 (364)
T ss_dssp -T-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSE
T ss_pred -c-cceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCce
Confidence 1 35676 68887543110 0 01133452 34555554442 245 99999999999
Q ss_pred cCCCCccccch--HH-HHHHH--HhhcCCCC---------CCCCc--hhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 149 LQDEYPIAVGQ--ER-AVKLV--REAAPLHR---------WLDVK--NDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 149 ~t~~~~~~~~~--~~-~~~~~--~~~~~~~~---------~~~~~--~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.++........ .. ..... ....+... +.... +|+|++++.++... ...|+++++.+|..++
T Consensus 182 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s 258 (364)
T 2v6g_A 182 FGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFK 258 (364)
T ss_dssp ECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBC
T ss_pred eCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCC
Confidence 98765422110 00 11111 12222111 12221 37999999988542 2468999999886443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1e-08 Score=82.61 Aligned_cols=161 Identities=13% Similarity=0.084 Sum_probs=95.8
Q ss_pred ceEEEEec-CCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 10 PVEVVGLD-MEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 10 ~~~~~~~D-l~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
++.++.+| ++|. +++.++++ ++|++|||++.. .. ..|..+ +.+++.+++
T Consensus 52 ~v~~v~~D~l~d~--~~l~~~~~-------~~d~Vi~~a~~~-~~---------------~~~~~~-----~~l~~aa~~ 101 (352)
T 1xgk_A 52 NVTLFQGPLLNNV--PLMDTLFE-------GAHLAFINTTSQ-AG---------------DEIAIG-----KDLADAAKR 101 (352)
T ss_dssp TEEEEESCCTTCH--HHHHHHHT-------TCSEEEECCCST-TS---------------CHHHHH-----HHHHHHHHH
T ss_pred CcEEEECCccCCH--HHHHHHHh-------cCCEEEEcCCCC-Cc---------------HHHHHH-----HHHHHHHHH
Confidence 68889999 9998 77776654 589999998753 10 113322 444444444
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHh
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVRE 168 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~ 168 (219)
.+.-++||++||......+ ......|+.+|.+.+.+++. .|+++++++||++.+..................
T Consensus 102 ~g~v~~~V~~SS~~~~~~~-~~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g 173 (352)
T 1xgk_A 102 AGTIQHYIYSSMPDHSLYG-PWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDG 173 (352)
T ss_dssp HSCCSEEEEEECCCGGGTS-SCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTS
T ss_pred cCCccEEEEeCCccccccC-CCCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCC
Confidence 3213699999998632122 24456899999999999875 279999999997644332110000000000000
Q ss_pred h----cC-----CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 169 A----AP-----LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 169 ~----~~-----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
. .+ ...+..+.+|+|++++.++........|+++++.++.
T Consensus 174 ~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~ 222 (352)
T 1xgk_A 174 TFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET 222 (352)
T ss_dssp CEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEE
T ss_pred ceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCC
Confidence 0 01 0112333139999999998643223468999998653
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.8e-06 Score=73.04 Aligned_cols=155 Identities=14% Similarity=0.161 Sum_probs=95.9
Q ss_pred hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC---------
Q 027744 37 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG--------- 107 (219)
Q Consensus 37 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~--------- 107 (219)
+.++|+|||+||... .. ....+..+..+++|+.++.++++++. +..+ .++||++||...+...
T Consensus 199 l~~~D~Vih~A~~~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~ 270 (516)
T 3oh8_A 199 LDGADVLVHLAGEPI-FG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGDEILTEE 270 (516)
T ss_dssp TTTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEEEEECTT
T ss_pred cCCCCEEEECCCCcc-cc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCCCccCCC
Confidence 357999999999742 21 34556678899999999999999743 2222 5799999997754200
Q ss_pred CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc--CC------CCCCCCc
Q 027744 108 LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA--PL------HRWLDVK 179 (219)
Q Consensus 108 ~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~ 179 (219)
...+...|+.+|...+.+.+.+ ...|+++++++||.+.++.... ............ .. ..+...
T Consensus 271 ~~~~~~~y~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~~---~~~~~~~~~~g~~~~~g~g~~~~~~i~v- 342 (516)
T 3oh8_A 271 SESGDDFLAEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGGM---LPLLKTLFSTGLGGKFGDGTSWFSWIAI- 342 (516)
T ss_dssp SCCCSSHHHHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBSH---HHHHHHTTC---CCCCTTSCCEECEEEH-
T ss_pred CCCCcChHHHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCCh---HHHHHHHHHhCCCcccCCCCceEceEeH-
Confidence 0124557888888877665433 3458999999999999875311 011111110100 01 112233
Q ss_pred hhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 180 NDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 180 ~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+|+|++++.++.... .. ..+++.+|..+
T Consensus 343 ~Dva~ai~~~l~~~~--~~-g~~ni~~~~~~ 370 (516)
T 3oh8_A 343 DDLTDIYYRAIVDAQ--IS-GPINAVAPNPV 370 (516)
T ss_dssp HHHHHHHHHHHHCTT--CC-EEEEESCSCCE
T ss_pred HHHHHHHHHHHhCcc--cC-CcEEEECCCCC
Confidence 499999999996532 33 46788777544
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-07 Score=73.38 Aligned_cols=156 Identities=11% Similarity=0.021 Sum_probs=97.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.+++++. ++|+|||+++.. |+.+...+++++...
T Consensus 60 ~~v~~~~~Dl~d~--~~l~~~~~~~-----~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~--- 109 (346)
T 3i6i_A 60 KGAIIVYGLINEQ--EAMEKILKEH-----EIDIVVSTVGGE--------------------SILDQIALVKAMKAV--- 109 (346)
T ss_dssp TTCEEEECCTTCH--HHHHHHHHHT-----TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH---
T ss_pred CCcEEEEeecCCH--HHHHHHHhhC-----CCCEEEECCchh--------------------hHHHHHHHHHHHHHc---
Confidence 4688999999998 8888877642 699999999862 777777777776542
Q ss_pred cCCCCeEEEeeccccc--ccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH-
Q 027744 89 SKAGGSIVFLTSIIGA--ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL- 165 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~--~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~- 165 (219)
+.-.++++ |+.... ...+..+...|+.+|.+.+.+.+. .|++++.++||.+.+...............
T Consensus 110 -g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~ 180 (346)
T 3i6i_A 110 -GTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPT 180 (346)
T ss_dssp -CCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCS
T ss_pred -CCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCC
Confidence 11246664 433221 011124567899999999888764 479999999998887654322111000000
Q ss_pred -----HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 166 -----VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 166 -----~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.........+...+ |+|++++.++... ...|+.+++.|
T Consensus 181 ~~~~~~g~g~~~~~~i~~~-Dva~~~~~~l~~~--~~~~~~~~i~g 223 (346)
T 3i6i_A 181 DFFQIYGDGNVKAYFVAGT-DIGKFTMKTVDDV--RTLNKSVHFRP 223 (346)
T ss_dssp SCEEEETTSCCCEEEECHH-HHHHHHHHHTTCG--GGTTEEEECCC
T ss_pred ceEEEccCCCceEEecCHH-HHHHHHHHHHhCc--cccCeEEEEeC
Confidence 00000111233444 9999999999753 23477787764
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.2e-07 Score=72.98 Aligned_cols=153 Identities=12% Similarity=0.095 Sum_probs=89.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. +++.++++ ++|++||+++.. . +.+...+++++ ++
T Consensus 55 ~~v~~v~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~-~-------------------~~~~~~l~~aa----~~ 101 (307)
T 2gas_A 55 LGVILLEGDINDH--ETLVKAIK-------QVDIVICAAGRL-L-------------------IEDQVKIIKAI----KE 101 (307)
T ss_dssp TTCEEEECCTTCH--HHHHHHHT-------TCSEEEECSSSS-C-------------------GGGHHHHHHHH----HH
T ss_pred CCCEEEEeCCCCH--HHHHHHHh-------CCCEEEECCccc-c-------------------cccHHHHHHHH----Hh
Confidence 3578999999998 77776654 589999999964 1 23344444443 33
Q ss_pred cCCCCeEEEeecccccccC----CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH----
Q 027744 89 SKAGGSIVFLTSIIGAERG----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---- 160 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~----~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~---- 160 (219)
.+.-+++|. |..+.... ..+....| .+|.+++.+++. .|++++.++||++.+.+........
T Consensus 102 ~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~ 171 (307)
T 2gas_A 102 AGNVKKFFP--SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDP 171 (307)
T ss_dssp HCCCSEEEC--SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSC
T ss_pred cCCceEEee--cccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccC
Confidence 321256763 43332110 01224578 999999887763 3789999999998876543211100
Q ss_pred H--HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 161 R--AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
. .............+..++ |+|++++.++.+.. ..|+.+.+.|+
T Consensus 172 ~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~~--~~~~~~~~~~~ 217 (307)
T 2gas_A 172 PRDKVVILGDGNVKGAYVTEA-DVGTFTIRAANDPN--TLNKAVHIRLP 217 (307)
T ss_dssp CSSEEEEETTSCSEEEEECHH-HHHHHHHHHHTCGG--GTTEEEECCCG
T ss_pred CCCeEEEecCCCcceEEeeHH-HHHHHHHHHHcCcc--ccCceEEEeCC
Confidence 0 000000000111234444 99999999997532 34788888653
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.22 E-value=8.2e-07 Score=69.89 Aligned_cols=157 Identities=12% Similarity=0.185 Sum_probs=90.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. +++.++++ ++|++||+++.... . .|+.+...+++++ ++
T Consensus 55 ~~~~~~~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~ 105 (313)
T 1qyd_A 55 LGAKLIEASLDDH--QRLVDALK-------QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KE 105 (313)
T ss_dssp TTCEEECCCSSCH--HHHHHHHT-------TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HH
T ss_pred CCeEEEeCCCCCH--HHHHHHHh-------CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----Hh
Confidence 4688999999998 77776654 58999999997521 1 2566666666555 33
Q ss_pred cCCCCeEEEeecccccccC----C-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch----
Q 027744 89 SKAGGSIVFLTSIIGAERG----L-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---- 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~----~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---- 159 (219)
.+.-++||+ | ..+.... + .+....| .+|.+++.+++. .|++++.++||++.+.+.......
T Consensus 106 ~g~v~~~v~-S-~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~ 175 (313)
T 1qyd_A 106 AGNIKRFLP-S-EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHM 175 (313)
T ss_dssp SCCCSEEEC-S-CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCS
T ss_pred cCCCceEEe-c-CCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccc
Confidence 321357774 3 3331111 0 1335678 999999887752 478899999988764322111000
Q ss_pred ---HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 160 ---ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 160 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
...............+..+ +|+|++++.++.... ..|+.+++.|+
T Consensus 176 ~~~~~~~~~~~~g~~~~~~i~~-~Dva~~~~~~l~~~~--~~~~~~~~~g~ 223 (313)
T 1qyd_A 176 MPPRDKVLIYGDGNVKGIWVDE-DDVGTYTIKSIDDPQ--TLNKTMYIRPP 223 (313)
T ss_dssp SCCSSEECCBTTSCSEEEEECH-HHHHHHHHHHTTCGG--GSSSEEECCCG
T ss_pred cCCCCeEEEeCCCCceEEEEEH-HHHHHHHHHHHhCcc--cCCceEEEeCC
Confidence 0000000000001122344 499999999997532 24777777653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-08 Score=76.29 Aligned_cols=155 Identities=10% Similarity=0.085 Sum_probs=87.7
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+++.. . +.+...+++++ ++
T Consensus 56 ~~v~~v~~D~~d~--~~l~~a~~-------~~d~vi~~a~~~-~-------------------~~~~~~l~~aa----~~ 102 (321)
T 3c1o_A 56 MGVTIIEGEMEEH--EKMVSVLK-------QVDIVISALPFP-M-------------------ISSQIHIINAI----KA 102 (321)
T ss_dssp TTCEEEECCTTCH--HHHHHHHT-------TCSEEEECCCGG-G-------------------SGGGHHHHHHH----HH
T ss_pred CCcEEEEecCCCH--HHHHHHHc-------CCCEEEECCCcc-c-------------------hhhHHHHHHHH----HH
Confidence 3588999999998 77777664 489999999864 1 33444444444 33
Q ss_pred cCCCCeEEEeeccccccc---CC-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------
Q 027744 89 SKAGGSIVFLTSIIGAER---GL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------ 158 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~---~~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------ 158 (219)
.+.-++|| .|..+... .+ .+....| .+|.+++.+++. .|++++.++||++.+........
T Consensus 103 ~g~v~~~v--~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~ 172 (321)
T 3c1o_A 103 AGNIKRFL--PSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPN 172 (321)
T ss_dssp HCCCCEEE--CSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCC
T ss_pred hCCccEEe--ccccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceecccccccccccccccc
Confidence 32125776 34333201 00 1114578 999999988863 36888899999876432110000
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC-Ccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG-AQS 209 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-G~~ 209 (219)
................+..++ |+|++++.++.... ..|+++++.| |..
T Consensus 173 ~~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~~--~~g~~~~~~g~~~~ 221 (321)
T 3c1o_A 173 RNDDIVIYGTGETKFVLNYEE-DIAKYTIKVACDPR--CCNRIVIYRPPKNI 221 (321)
T ss_dssp TTSCEEEETTSCCEEEEECHH-HHHHHHHHHHHCGG--GTTEEEECCCGGGE
T ss_pred ccCceEEecCCCcceeEeeHH-HHHHHHHHHHhCcc--ccCeEEEEeCCCCc
Confidence 000000000000111233444 99999999997532 3488888876 343
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.13 E-value=7.5e-05 Score=58.26 Aligned_cols=160 Identities=14% Similarity=0.103 Sum_probs=93.6
Q ss_pred HhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC--------
Q 027744 36 ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG-------- 107 (219)
Q Consensus 36 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~-------- 107 (219)
.+.++|.+||.|+.. ........+....+..+..|+.++..+.+++...- .+..++|+.||...+-..
T Consensus 48 ~l~~~d~vihla~~~-i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~---~~~~~~i~~Ss~~vyg~~~~~~~~E~ 123 (298)
T 4b4o_A 48 GLPSCDAAVNLAGEN-ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP---QPPKAWVLVTGVAYYQPSLTAEYDED 123 (298)
T ss_dssp CCCSCSEEEECCCCC-SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS---SCCSEEEEEEEGGGSCCCSSCCBCTT
T ss_pred hccCCCEEEEeccCc-ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC---CCceEEEEEeeeeeecCCCCCccccc
Confidence 356899999999853 33344445677778888999888877776654321 113457777877654111
Q ss_pred -CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc--CCC------CCCCC
Q 027744 108 -LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA--PLH------RWLDV 178 (219)
Q Consensus 108 -~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~ 178 (219)
+..+...|+..|...+.. ......++++..++||.+..+..... ........... ..+ .+...
T Consensus 124 ~p~~~~~~~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~ihv 195 (298)
T 4b4o_A 124 SPGGDFDFFSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPFRLGLGGPIGSGHQFFPWIHI 195 (298)
T ss_dssp CCCSCSSHHHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHHHTTCCCCBTTSCSBCCEEEH
T ss_pred CCccccchhHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCch---hHHHHHHhcCCcceecccCceeecCcH
Confidence 112334455555444332 23456789999999999988753221 11111111111 111 11122
Q ss_pred chhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 179 ~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+|+++++..++... ...| ++++.++..++
T Consensus 196 -~Dva~a~~~~~~~~--~~~g-~yn~~~~~~~t 224 (298)
T 4b4o_A 196 -GDLAGILTHALEAN--HVHG-VLNGVAPSSAT 224 (298)
T ss_dssp -HHHHHHHHHHHHCT--TCCE-EEEESCSCCCB
T ss_pred -HHHHHHHHHHHhCC--CCCC-eEEEECCCccC
Confidence 59999999988643 2344 89998887654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.07 E-value=8.5e-07 Score=69.64 Aligned_cols=154 Identities=12% Similarity=0.140 Sum_probs=86.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +++.++++ ++|++||+++.. . +.+...+++++ ++
T Consensus 56 ~~v~~v~~D~~d~--~~l~~~~~-------~~d~vi~~a~~~-~-------------------~~~~~~l~~aa----~~ 102 (308)
T 1qyc_A 56 SGANIVHGSIDDH--ASLVEAVK-------NVDVVISTVGSL-Q-------------------IESQVNIIKAI----KE 102 (308)
T ss_dssp TTCEEECCCTTCH--HHHHHHHH-------TCSEEEECCCGG-G-------------------SGGGHHHHHHH----HH
T ss_pred CCCEEEEeccCCH--HHHHHHHc-------CCCEEEECCcch-h-------------------hhhHHHHHHHH----Hh
Confidence 4688999999998 77777665 489999999863 1 23334444444 33
Q ss_pred cCCCCeEEEeeccccccc--CC-CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH-----
Q 027744 89 SKAGGSIVFLTSIIGAER--GL-YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE----- 160 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~--~~-~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~----- 160 (219)
.+.-++||+ |+...... .+ .+....| .+|.+++.+++. .|++++.++||++.+.+........
T Consensus 103 ~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 173 (308)
T 1qyc_A 103 VGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPP 173 (308)
T ss_dssp HCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCC
T ss_pred cCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCC
Confidence 321357763 43321111 00 1224568 999999888764 3688889999876543221110000
Q ss_pred -HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 161 -RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
..............+..++ |+|++++.++... ...|+.+++.|+
T Consensus 174 ~~~~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~--~~~~~~~~~~g~ 218 (308)
T 1qyc_A 174 RDKVVILGDGNARVVFVKEE-DIGTFTIKAVDDP--RTLNKTLYLRLP 218 (308)
T ss_dssp SSEEEEETTSCCEEEEECHH-HHHHHHHTTSSCG--GGTTEEEECCCG
T ss_pred CCceEEecCCCceEEEecHH-HHHHHHHHHHhCc--cccCeEEEEeCC
Confidence 0000000000011223344 9999999998653 234778888653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.3e-06 Score=68.98 Aligned_cols=151 Identities=11% Similarity=0.092 Sum_probs=83.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.++++.+|++|. +++.++++ ++|+|||+++.. . +.+...++++ +++.
T Consensus 59 ~v~~v~~Dl~d~--~~l~~a~~-------~~d~vi~~a~~~-~-------------------~~~~~~l~~a----a~~~ 105 (318)
T 2r6j_A 59 GAIIVKGELDEH--EKLVELMK-------KVDVVISALAFP-Q-------------------ILDQFKILEA----IKVA 105 (318)
T ss_dssp TCEEEECCTTCH--HHHHHHHT-------TCSEEEECCCGG-G-------------------STTHHHHHHH----HHHH
T ss_pred CCEEEEecCCCH--HHHHHHHc-------CCCEEEECCchh-h-------------------hHHHHHHHHH----HHhc
Confidence 578999999998 77777664 589999999863 1 2233344444 3443
Q ss_pred CCCCeEEEeecccccccCC-C---CCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH--
Q 027744 90 KAGGSIVFLTSIIGAERGL-Y---PGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-- 163 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~-~---~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-- 163 (219)
+.-++||+ |+ .+..... . +....| .+|.+++.+++. .|++++.++||++.+.+...........
T Consensus 106 g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~ 175 (318)
T 2r6j_A 106 GNIKRFLP-SD-FGVEEDRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDE 175 (318)
T ss_dssp CCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSE
T ss_pred CCCCEEEe-ec-cccCcccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCc
Confidence 21357763 33 3311110 1 113468 999998887763 4788899999876532111000000000
Q ss_pred -HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 164 -KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 164 -~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
...........+..++ |+|++++.++.... ..|+.+++.|
T Consensus 176 ~~~~~~~~~~~~~i~~~-Dva~~~~~~l~~~~--~~~~~~~~~g 216 (318)
T 2r6j_A 176 ITVYGTGEAKFAMNYEQ-DIGLYTIKVATDPR--ALNRVVIYRP 216 (318)
T ss_dssp EEEETTSCCEEEEECHH-HHHHHHHHHTTCGG--GTTEEEECCC
T ss_pred eEEecCCCceeeEeeHH-HHHHHHHHHhcCcc--ccCeEEEecC
Confidence 0000000011123344 99999999997532 2367788765
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=7.7e-05 Score=52.80 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccC
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYE 50 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 50 (219)
|.++..+++|++++.+++++++++.+.+.+|+ |++|||||+.
T Consensus 67 G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~ 108 (157)
T 3gxh_A 67 GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANY 108 (157)
T ss_dssp TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence 56788899999987667899999999998999 9999999974
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00063 Score=53.97 Aligned_cols=90 Identities=9% Similarity=-0.064 Sum_probs=62.2
Q ss_pred HHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccccc-------ccC
Q 027744 35 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA-------ERG 107 (219)
Q Consensus 35 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~-------~~~ 107 (219)
+.+.+.|++||.||..... ..+ ....+++|+.++..+++++..+- +..++++++|+.... ...
T Consensus 76 ~a~~~~D~Vih~Ag~~~~~----~~~---~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 76 VAFKDADYALLVGAAPRKA----GME---RRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp HHTTTCSEEEECCCCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred HHhCCCCEEEECCCcCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHHHHHHHcC
Confidence 3455799999999975221 233 34568999999999988886541 114688888876521 110
Q ss_pred CCCCcchhHHhHHHHHHHHHHHHHHhC
Q 027744 108 LYPGAAAYGACAASIHQLVRTAAMEIG 134 (219)
Q Consensus 108 ~~~~~~~y~~sK~a~~~l~~~l~~e~~ 134 (219)
..++...|+.+|...+.+.+.+++.++
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~g 172 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKTG 172 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred CCChhheeccchHHHHHHHHHHHHHhC
Confidence 145566799999999999998888763
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=92.12 E-value=0.0038 Score=48.43 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=33.6
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCH-HHHHHHHHhhhchHH
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGE-DEFKKLVKINFVAPW 76 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~ 76 (219)
+.++.+|+++. +++.++++ .+|++|||+|......+..+.+. ++|+..+++|+.+++
T Consensus 169 ~~~~~~D~~~~--~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 169 VNVTAAETADD--ASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp CCCEEEECCSH--HHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred cEEEEecCCCH--HHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 56677888887 66655543 48999999986312222212222 344445666666554
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=91.89 E-value=0.057 Score=40.42 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=33.6
Q ss_pred ecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHH
Q 027744 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65 (219)
Q Consensus 16 ~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~ 65 (219)
+|+.+. ++++++++.+.+.++++|++|||||+. ...+....+.+++.
T Consensus 63 ~~~~~v--~s~~em~~~v~~~~~~~Dili~aAAvs-D~~p~~~~~~e~~~ 109 (232)
T 2gk4_A 63 LSIREI--TNTKDLLIEMQERVQDYQVLIHSMAVS-DYTPVYMTGLEEVQ 109 (232)
T ss_dssp EEEEEC--CSHHHHHHHHHHHGGGCSEEEECSBCC-SEEEEEEEEHHHHH
T ss_pred eEEEEH--hHHHHHHHHHHHhcCCCCEEEEcCccc-cccchhhcchhhhh
Confidence 345555 677888899999999999999999985 55554444444433
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=91.58 E-value=0.1 Score=38.87 Aligned_cols=103 Identities=8% Similarity=0.004 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHH--HHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecc
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL--VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSI 101 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~ 101 (219)
++++++++.+.+.++++|++|||||+. ...++ ......+.+. ...++.-.+..+..+++.+.+...++.+ .|+ .
T Consensus 72 ~~~~~~~~~v~~~~~~~Dili~~Aav~-d~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~VG-F 147 (226)
T 1u7z_A 72 MTALEMEAAVNASVQQQNIFIGCAAVA-DYRAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VVG-F 147 (226)
T ss_dssp CSHHHHHHHHHHHGGGCSEEEECCBCC-SEEES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EEE-E
T ss_pred CcHHHHHHHHHHhcCCCCEEEECCccc-CCCCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EEE-c
Confidence 445667788888899999999999985 43333 2233334441 1224444555555666666553213443 222 1
Q ss_pred cccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 102 IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 102 ~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
++. . +.+.+...+++.++|+.+.+.++..
T Consensus 148 aaE-t----------------~~l~e~A~~kL~~k~~d~ivaN~~~ 176 (226)
T 1u7z_A 148 AAE-T----------------NNVEEYARQKRIRKNLDLICANDVS 176 (226)
T ss_dssp EEE-S----------------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred chh-h----------------chHHHHHHHHHHhcCCCEEEEeecc
Confidence 221 1 2255666666666788777777654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=84.48 E-value=17 Score=30.48 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=68.2
Q ss_pred CcceEEEEecCC-ccchhHHHHHHHHHH-HHhCCCcEEEeccccCCCCCCCCC-cCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDME-EDREGAFDEAVDKAC-QILGNLDAFVHCYTYEGKMQDPLQ-VGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~-~~~~~~~~~~~~~~~-~~~g~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
|.++..+..+-. +. ++....+.+.. ...+.++.++|..+.-....+... .. ...+.+.+.++|++..
T Consensus 75 G~~v~~v~~~~~~~~--~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~ 144 (525)
T 3qp9_A 75 GADPVQLDVSPLGDR--QRLAATLGEALAAAGGAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALED 144 (525)
T ss_dssp TCEEEEEEECTTCCH--HHHHHHHHHHHHHTTSCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCH--HHHHHHHHhhhhcccCCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHh
Confidence 344544444433 33 44555554322 455779999999876322111111 11 0234456677777643
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~p 145 (219)
.+...++..++..+.. .+ +....-...++++.+|.|+++.|+....++...+.+
T Consensus 145 ----~~~~~~l~~vT~ga~~-~~--~~~~~~~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~ 198 (525)
T 3qp9_A 145 ----AGVAAPLWCVTHGAVS-VG--RADHVTSPAQAMVWGMGRVAALEHPERWGGLIDLPS 198 (525)
T ss_dssp ----TTCCSCEEEEEESCCC-CB--TTBCCSCHHHHHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred ----cCCCCcEEEEECCCEe-CC--CCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence 2224677777765432 11 222234678899999999999999876566666543
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=83.57 E-value=1.2 Score=36.07 Aligned_cols=34 Identities=3% Similarity=0.090 Sum_probs=28.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEecccc
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTY 49 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~ 49 (219)
.++..+.+|++|. +++++++++. ++|+|||+++.
T Consensus 53 ~~~~~~~~D~~d~--~~l~~~l~~~-----~~DvVin~ag~ 86 (405)
T 4ina_A 53 GEIDITTVDADSI--EELVALINEV-----KPQIVLNIALP 86 (405)
T ss_dssp CCCEEEECCTTCH--HHHHHHHHHH-----CCSEEEECSCG
T ss_pred CceEEEEecCCCH--HHHHHHHHhh-----CCCEEEECCCc
Confidence 4688899999998 8888888765 68999999885
|
| >1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A* | Back alignment and structure |
|---|
Probab=81.33 E-value=13 Score=29.84 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhc----hHHHHHHHHHHHHHhcCCCCeEEEee
Q 027744 24 GAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFV----APWFLLKAVGRRMKESKAGGSIVFLT 99 (219)
Q Consensus 24 ~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~----~~~~l~~~~~~~l~~~~~~g~iv~is 99 (219)
+.++++++.+++. ++|++||.+.- .+..+. -+.+.+++.+..|-. +......+++.+-++.. +..+||-+
T Consensus 122 e~v~~vv~~lk~~--~~DVvIn~~ST-E~~~p~--gs~~~l~~ai~~~~~~~i~aS~~YA~AAl~~~~~~a-G~~fVN~~ 195 (394)
T 1vjp_A 122 EAVDTLVKEWTEL--DPDVIVNTCTT-EAFVPF--GNKEDLLKAIENNDKERLTATQVYAYAAALYANKRG-GAAFVNVI 195 (394)
T ss_dssp HHHHHHHHHHHHH--CCSEEEECCCC-CCCCCC--SSHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHT-CEEEEECS
T ss_pred hHHHHHHHHHHHc--CCCEEEEecCc-cCCCCC--CCHHHHHHHHhcCCCCccChHHHHHHHHHhhccccC-CcceEecC
Confidence 3445566655443 58999999873 333333 578899999998863 55555566665544433 45677766
Q ss_pred ccccc-ccCC-------CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 027744 100 SIIGA-ERGL-------YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145 (219)
Q Consensus 100 s~~~~-~~~~-------~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~p 145 (219)
..... .++. .-+... .-+|.+..-+-+.|+.-+..+|+++..+.-
T Consensus 196 P~~ia~~P~~~ela~~~gvpi~G-DD~ktGqT~lks~La~~l~~Rglkv~~~~q 248 (394)
T 1vjp_A 196 PTFIANDPAFVELAKENNLVVFG-DDGATGATPFTADVLSHLAQRNRYVKDVAQ 248 (394)
T ss_dssp SSCSTTCHHHHHHHHHTTEEEEC-SSBSCSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEc-cccCCCCCchHHHHHHHHHHcCCceeEEEE
Confidence 54321 0000 000011 116777788888888888889998876663
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 219 | ||||
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 8e-30 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 1e-29 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 5e-29 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-28 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 4e-28 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-27 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 2e-27 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 9e-27 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 2e-26 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 7e-26 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 7e-26 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 1e-25 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 4e-25 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 4e-25 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 4e-25 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 5e-24 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 6e-24 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-23 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 1e-23 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-23 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 3e-23 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-23 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 9e-23 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 9e-23 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 2e-22 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-22 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-22 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 5e-22 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 8e-22 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-21 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-21 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 3e-21 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-21 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 1e-20 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 3e-20 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 8e-20 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 1e-19 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 2e-19 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 6e-19 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 9e-19 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 1e-18 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-18 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 3e-18 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 3e-17 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 4e-17 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 6e-17 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 1e-16 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-16 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 4e-16 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 6e-16 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-14 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-13 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 1e-13 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 2e-13 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-13 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 6e-13 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-13 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 5e-11 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 1e-10 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-10 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 9e-10 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 6e-09 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 1e-08 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 3e-08 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 1e-06 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 1e-05 |
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 108 bits (272), Expect = 8e-30
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E V++A LG +D V+ L V E+++++++N AP L
Sbjct: 60 ERERVRFVEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWRRVLEVNLTAPMHLSALA 118
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
R M+ K GG + + + AAY A + L R+ A+++ +IRVN
Sbjct: 119 AREMR--KVGGGAIVNVASVQGLFA-EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175
Query: 143 IARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
+A G + + ++ ER + + L R + ++A V++L S+ + ++T
Sbjct: 176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-EVAEAVLFLASEKASFIT 234
Query: 199 GTTIYVDGAQSIT 211
G + VDG + +
Sbjct: 235 GAILPVDGGMTAS 247
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (270), Expect = 1e-29
Identities = 36/196 (18%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFL 78
E+D + E + + ++ D V+ + Q P + F++L+++N + + L
Sbjct: 63 EDDVKTLVSETIRRFGRL----DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118
Query: 79 LKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI 138
K ++ K+ G+++ ++S++GA A Y A ++ + + A++ + +
Sbjct: 119 TKLALPYLR--KSQGNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKALALDESPYGV 174
Query: 139 RVNGIARGL----HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
RVN I+ G ++ + +++ A PL R ++ + ++L S+ +
Sbjct: 175 RVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA-EVGAAAVFLASE-A 232
Query: 195 RYMTGTTIYVDGAQSI 210
+ TG + V G +
Sbjct: 233 NFCTGIELLVTGGAEL 248
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 106 bits (266), Expect = 5e-29
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+A +KA +G +D V+ MQ L+V ++ F + +N + + + + V R M
Sbjct: 63 DATEKALGGIGPVDLLVNN-AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMI 121
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
GSIV ++S+ +P Y + ++ L + AME+G HKIRVN + +
Sbjct: 122 NRGVPGSIVNVSSM--VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 179
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
L D + ++E PL ++ +V+ D+ +++++L+SD S +G I VD
Sbjct: 180 VLTDMGKKVSADPEFARKLKERHPLRKFAEVE-DVVNSILFLLSDRSASTSGGGILVDA 237
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 2e-28
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
EA ++A +G +D V+ +Q L+V ++ F + ++N A + + V R +
Sbjct: 65 EATERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLI 123
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
G+IV ++S + + Y + ++ L + A+E+G HKIRVN + +
Sbjct: 124 ARGVPGAIVNVSSQCS--QRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ K + PL ++ +V+ + + +++L+SD S TG+T+ V+G
Sbjct: 182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVE-HVVNAILFLLSDRSGMTTGSTLPVEG 239
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 104 bits (261), Expect = 4e-28
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 9/208 (4%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
S+ ++ D + E + + D + G + V+ + + E
Sbjct: 49 SVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAE 105
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
++KL+ +N +F + +RMK G SI+ ++SI G P AY A ++
Sbjct: 106 WRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FVGDPSLGAYNASKGAVR 163
Query: 124 QLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ ++AA++ + +RVN + G G E A+ R P+ + ND
Sbjct: 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQ-RTKTPMGHIGEP-ND 221
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQS 209
+A +YL S+ S++ TG+ VDG +
Sbjct: 222 IAYICVYLASNESKFATGSEFVVDGGYT 249
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 103 bits (257), Expect = 1e-27
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G LD+ E + V A + G++D V+ M + F+K+
Sbjct: 50 GDAARYQHLDV--TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE-TESVERFRKV 106
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
V+IN + +K V MK++ GGSIV ++S G ++YGA + L +
Sbjct: 107 VEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAG--LMGLALTSSYGASKWGVRGLSK 163
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
AA+E+G +IRVN + G+ A R + P+ R + ++A V+
Sbjct: 164 LAAVELGTDRIRVNSVHPGMTYTPM--TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221
Query: 188 YLISDGSRYMTGTTIYVDGAQSITRPRMRSYM 219
L+SD S Y+TG + VDG + T P ++ M
Sbjct: 222 KLLSDTSSYVTGAELAVDGGWT-TGPTVKYVM 252
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 103 bits (257), Expect = 2e-27
Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 15/216 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGED 62
G V + + + DE + G LD V+ + + + +
Sbjct: 52 AGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIE 111
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+ + +N + L K + +K G IV ++SI P Y A+I
Sbjct: 112 SYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHA-TPDFPYYSIAKAAI 168
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRW 175
Q R A+++ +H IRVN I+ GL + + + ++E P
Sbjct: 169 DQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVM 228
Query: 176 LDVKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQSI 210
+ D+A + +L S Y+ G + VDG S+
Sbjct: 229 GQPQ-DIAEVIAFLADRKTSSYIIGHQLVVDGGSSL 263
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 101 bits (252), Expect = 9e-27
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 11/201 (5%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G+ V V D+ D E + + G D V+ + ++ +++K
Sbjct: 51 GRRVLTVKCDVSQPGDVEAFGKQVIST----FGRCDILVNNAGI-YPLIPFDELTFEQWK 105
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K +IN + + + KA MK + G I+ LTS Y + A+
Sbjct: 106 KTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTY--WLKIEAYTHYISTKAANIGF 162
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAST 185
R A ++GK I VN IA L + L + R DL
Sbjct: 163 TRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-DLTGA 221
Query: 186 VIYLISDGSRYMTGTTIYVDG 206
+L SD + ++TG T+ VDG
Sbjct: 222 AAFLASDDASFITGQTLAVDG 242
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 100 bits (250), Expect = 2e-26
Identities = 41/210 (19%), Positives = 82/210 (39%), Gaps = 11/210 (5%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ G + D+ + + + LG + + ++ ++ ++F
Sbjct: 56 EFGVKTKAYQCDVSN--TDIVTKTIQQIDADLGPISGLIANA-GVSVVKPATELTHEDFA 112
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIG-----AERGLYPGAAAYGACAA 120
+ +N + +AV + + + GSIV +S+ + Y + A
Sbjct: 113 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKA 172
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKN 180
+ LV+ A E IRVN ++ G D+ A ++ PL+R+ +
Sbjct: 173 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ--TAHMDKKIRDHQASNIPLNRFAQPE- 229
Query: 181 DLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
++ I L+SD + YMTG ++DG Q I
Sbjct: 230 EMTGQAILLLSDHATYMTGGEYFIDGGQLI 259
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 98.5 bits (245), Expect = 7e-26
Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G D+ + + E ++K N+D V+ ++ DE++ +
Sbjct: 58 GYESSGYAGDVSK--KEEISEVINKILTEHKNVDILVNNAGITRDNLFL-RMKNDEWEDV 114
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
++ N + +++ + + +RM ++ G I+ ++SI+G G A Y + A + +
Sbjct: 115 LRTNLNSLFYITQPISKRMINNR-YGRIINISSIVG--LTGNVGQANYSSSKAGVIGFTK 171
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
+ A E+ I VN IA G D E+ K + P R + ++A+
Sbjct: 172 SLAKELASRNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIPAGRMGTPE-EVANLAC 228
Query: 188 YLISDGSRYMTGTTIYVDGAQS 209
+L SD S Y+ G +DG S
Sbjct: 229 FLSSDKSGYINGRVFVIDGGLS 250
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 98.9 bits (246), Expect = 7e-26
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 15/218 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGED 62
G +V + + E D+ ++ + G +D V+ + G D
Sbjct: 52 SGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID 111
Query: 63 EFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASI 122
+ K +K+N A + K V + SK V S I A P Y A++
Sbjct: 112 IYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNV---SSIVAGPQAQPDFLYYAIAKAAL 168
Query: 123 HQLVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRW 175
Q R+ A+++ K IRVN ++ G+ + + + +E P+
Sbjct: 169 DQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAA 228
Query: 176 LDVKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQSITR 212
+ +A+ +++L + S Y+ G +I DG S+
Sbjct: 229 GKPE-HIANIILFLADRNLSFYILGQSIVADGGTSLVM 265
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 98.4 bits (244), Expect = 1e-25
Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 9/197 (4%)
Query: 18 MEEDREGAFDEAVDKACQILGNLDAFVHC---YTYEGKMQDPLQVGEDEFKKLVKINFVA 74
+ ++ D + G LD VH E + ++ ++++ +
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124
Query: 75 PWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG 134
+ + ++E GG IV LT + P A++ VR A E+G
Sbjct: 125 LVAVARRAEPLLRE---GGGIVTLTYYAS--EKVVPKYNVMAIAKAALEASVRYLAYELG 179
Query: 135 KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS 194
+RVN I+ G G + V + APL R + + ++ + ++L+S +
Sbjct: 180 PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE-EVGNLGLFLLSPLA 238
Query: 195 RYMTGTTIYVDGAQSIT 211
+TG +YVD I
Sbjct: 239 SGITGEVVYVDAGYHIM 255
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.7 bits (240), Expect = 4e-25
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 7/164 (4%)
Query: 51 GKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYP 110
L E ++ + +N + + ++KA +M + G+I+ ++S+ + +G+
Sbjct: 85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLA-QKSGNIINMSSVASSVKGVVN 143
Query: 111 GAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH----LQDEYPIAVGQERAVKLV 166
Y A++ L ++ A + + IR N + G LQ+ E A
Sbjct: 144 RCV-YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF 202
Query: 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ R+ + ++A +YL SD S Y+TG + +DG S+
Sbjct: 203 LKRQKTGRFATAE-EIAMLCVYLASDESAYVTGNPVIIDGGWSL 245
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.9 bits (241), Expect = 4e-25
Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 8/204 (3%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G P ++ + E +D ++ + L +K +
Sbjct: 58 GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINN-AGLARPDTLLSGSTSGWKDM 116
Query: 68 VKINFVAPWFLLKAVGRRMKESKA-GGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 126
+N +A + + MKE G I+ + S+ G Y A ++ L
Sbjct: 117 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT 176
Query: 127 RTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
E+ + IR I+ G+ ++ + + L + D+A
Sbjct: 177 EGLRQELREAQTHIRATCISPGVVETQF--AFKLHDKDPEKAAATYEQMKCLKPE-DVAE 233
Query: 185 TVIYLISDGSRYMTGT-TIYVDGA 207
VIY++S + G + G+
Sbjct: 234 AVIYVLSTPAHIQIGDIQMRPTGS 257
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 97.0 bits (241), Expect = 4e-25
Identities = 34/214 (15%), Positives = 80/214 (37%), Gaps = 13/214 (6%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC-YTYEGKMQDPLQVGEDEF 64
G ++ + + D+ ++ G +D V+ + +
Sbjct: 51 AGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY 110
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+K K+NF A + + + ++ + S I A + G Y A++ Q
Sbjct: 111 QKTFKLNFQAVIEMTQKTKEHLIKT---KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQ 167
Query: 125 LVRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
R A+++ +H +RVN ++ G + + + +E P+
Sbjct: 168 YTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK 227
Query: 178 VKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQSI 210
+ ++A+ +++L + S Y+ G +I DG ++
Sbjct: 228 PE-EIANIIVFLADRNLSSYIIGQSIVADGGSTL 260
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 94.0 bits (233), Expect = 5e-24
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 7/212 (3%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHC-YTYEGKMQDPLQVGEDE 63
+ + V D+ + + VD G LD L+ G ++
Sbjct: 50 IGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNED 107
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
FK+++ IN + + K R M +K G + T+ I + + Y A ++
Sbjct: 108 FKRVMDINVYGAFLVAKHAARVMIPAKKGS--IVFTASISSFTAGEGVSHVYTATKHAVL 165
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVKLVREAAPLHRWLDVKND 181
L + E+G++ IRVN ++ + G R +L +AA L L D
Sbjct: 166 GLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED 225
Query: 182 LASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213
+A V YL D S+Y++G + +DG + T P
Sbjct: 226 VADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 257
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 93.5 bits (232), Expect = 6e-24
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 9/188 (4%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E + + + LG L+ V+ D ++F +L+KIN + + +
Sbjct: 64 EADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRV 140
MKE+ GGSI+ + S+ A Y A A++ L R AA+ K + IRV
Sbjct: 123 IAAMKET--GGSIINMASVSS--WLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 141 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW--LDVKNDLASTVIYLISDGSRYMT 198
N I ++ + + ++V L+R + +A V++L SD S M+
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238
Query: 199 GTTIYVDG 206
G+ ++ D
Sbjct: 239 GSELHADN 246
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 92.8 bits (230), Expect = 1e-23
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
+ + +A LG LD VH + ++ ++++ ++++N + + KA
Sbjct: 61 PASVERGFAEALAHLGRLDGVVHY-AGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAA 119
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
M+E G ++ + + G A Y A A + L RT A+E+G+ IRVN
Sbjct: 120 SEAMREKNPGSIVLTASRVYLG----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175
Query: 143 IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
+A G A E+ + A PL R ++A ++L+SD S ++TG +
Sbjct: 176 LAPGFIETRM--TAKVPEKVREKAIAATPLGRAGKPL-EVAYAALFLLSDESSFITGQVL 232
Query: 203 YVDGAQSI 210
+VDG ++I
Sbjct: 233 FVDGGRTI 240
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.6 bits (232), Expect = 1e-23
Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 10/207 (4%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
V + ++ E + V G ++ V+ + + +
Sbjct: 63 TKQARVIPIQCNIRN--EEEVNNLVKSTLDTFGKINFLVNNG-GGQFLSPAEHISSKGWH 119
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+++ N +++ KAV + G + + +P A GA A ++ L
Sbjct: 120 AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----FPLAVHSGAARAGVYNL 175
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDVKNDLA 183
++ A+E IR+N +A G+ G + + + P R + +++
Sbjct: 176 TKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE-EVS 234
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQSI 210
S V +L+S + ++TG ++ VDG +S+
Sbjct: 235 SVVCFLLSPAASFITGQSVDVDGGRSL 261
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 92.4 bits (229), Expect = 2e-23
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 13/204 (6%)
Query: 8 GQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
G VE D+ +R+ + + G L+ V+ ++ +++
Sbjct: 56 GFKVEASVCDLSSRSERQELMNTVANHFH---GKLNILVNNAGI-VIYKEAKDYTVEDYS 111
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
++ INF A + L +K S+ G + S + P A YGA ++ QL
Sbjct: 112 LIMSINFEAAYHLSVLAHPFLKASERGNVVFI--SSVSGALA-VPYEAVYGATKGAMDQL 168
Query: 126 VRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDL 182
R A E K IRVNG+ G+ L + Q+ + + + L R + K +L
Sbjct: 169 TRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK-EL 227
Query: 183 ASTVIYLISDGSRYMTGTTIYVDG 206
A+ V +L + Y+TG IYVDG
Sbjct: 228 AAMVAFLCFPAASYVTGQIIYVDG 251
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 91.9 bits (227), Expect = 3e-23
Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 6/205 (2%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKK 66
G V + + + F E + G + + + V + FK
Sbjct: 55 GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 114
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLV 126
I+ + + KA + GS + S +GAER P G AS+ V
Sbjct: 115 AHDISSYSFVAMAKACRSMLNP----GSALLTLSYLGAERA-IPNYNVMGLAKASLEANV 169
Query: 127 RTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTV 186
R A +G +RVN I+ G + + P+ R + ++ D+ ++
Sbjct: 170 RYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE-DVGNSA 228
Query: 187 IYLISDGSRYMTGTTIYVDGAQSIT 211
+L SD S ++G ++VDG SI
Sbjct: 229 AFLCSDLSAGISGEVVHVDGGFSIA 253
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 90.6 bits (224), Expect = 7e-23
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Query: 43 FVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102
+ + +++ ++E+ +++ N + + L KAV R M + + G I+ + S++
Sbjct: 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVV 139
Query: 103 GAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162
G G A Y A A + ++ A E+ I VN +A G D +RA
Sbjct: 140 G--TMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRA 197
Query: 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
+ P R + ++A+ V +L SD + Y+TG T++V+G +
Sbjct: 198 G--ILAQVPAGRLGGAQ-EIANAVAFLASDEAAYITGETLHVNGGMYM 242
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 90.5 bits (224), Expect = 9e-23
Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 13/203 (6%)
Query: 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAP 75
+ +RE G LD ++ + + L ++F + N +
Sbjct: 66 ASLRPEREKLMQTVSSMFG---GKLDILINNLGA-IRSKPTLDYTAEDFSFHISTNLESA 121
Query: 76 WFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK 135
+ L + +K +G + S I G+ Y A +++QL R A E
Sbjct: 122 YHLSQLAHPLLK--ASGCGNIIFMSSIAGVVSASVGSI-YSATKGALNQLARNLACEWAS 178
Query: 136 HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSR 195
IR N +A + AV + K+V PL R+ + + +++S V +L +
Sbjct: 179 DGIRANAVAPAVIATPLAE-AVYDDEFKKVVISRKPLGRFGEPE-EVSSLVAFLCMPAAS 236
Query: 196 YMTGTTIYVDGAQSIT----RPR 214
Y+TG TI VDG ++ +P+
Sbjct: 237 YITGQTICVDGGLTVNGFSYQPQ 259
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.4 bits (224), Expect = 9e-23
Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 31/223 (13%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKK 66
Q + D+ + + + K G LD V+ + ++K
Sbjct: 52 EPQKTLFIQCDVAD--QQQLRDTFRKVVDHFGRLDILVNNAGVNNEK---------NWEK 100
Query: 67 LVKINFVAPWFLLKAVGRRMKESKAG--GSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
++IN V+ M + G G I+ ++S+ G Y A I
Sbjct: 101 TLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPVAQQPVYCASKHGIVG 158
Query: 125 LVRTAAM--EIGKHKIRVNGIARGL-------HLQDEYPIAVGQERAVKLVREAAPLHRW 175
R+AA+ + +R+N I G ++ E + E +++ +
Sbjct: 159 FTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK-DHIKDMIKYYGI 217
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRMRSY 218
LD +A+ +I LI D + G + + ++ I + Y
Sbjct: 218 LDPP-LIANGLITLIED--DALNGAIMKITTSKGI---HFQDY 254
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 90.1 bits (223), Expect = 2e-22
Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 17/216 (7%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
G V + D+ ED++ A V + +I + + P + +
Sbjct: 48 DHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAA 107
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F ++ IN +KA + S G+++F S G G Y A +I
Sbjct: 108 FDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPN--GGGPLYTAAKHAIV 163
Query: 124 QLVRTAAMEIGKHKIRVNGIARGL--------HLQDEYPIAVGQERAVKLVREAAPLHRW 175
LVR A E+ + +RVNG+ G A+ +++ P+ R
Sbjct: 164 GLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRM 222
Query: 176 LDVKNDLASTVIYLIS-DGSRYMTGTTIYVDGAQSI 210
+V+ + ++ + + TG + DG +
Sbjct: 223 PEVE-EYTGAYVFFATRGDAAPATGALLNYDGGLGV 257
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 89.0 bits (220), Expect = 3e-22
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 8/201 (3%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 70
+ + + +E + + A G +D V + +++ + ++ +++ +
Sbjct: 51 GQAITFGGDVSKEADVEAMMKTAIDAWGTID-VVVNNAGITRDTLLIRMKKSQWDEVIDL 109
Query: 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 130
N + +A + M + + G I+ + S++G G A Y A A + +TAA
Sbjct: 110 NLTGVFLCTQAATKIMMKKR-KGRIINIASVVG--LIGNIGQANYAAAKAGVIGFSKTAA 166
Query: 131 MEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL- 189
E I VN + G D A E K + PL R + ++A V +L
Sbjct: 167 REGASRNINVNVVCPGFIASDM--TAKLGEDMEKKILGTIPLGRTGQPE-NVAGLVEFLA 223
Query: 190 ISDGSRYMTGTTIYVDGAQSI 210
+S + Y+TG +DG +I
Sbjct: 224 LSPAASYITGQAFTIDGGIAI 244
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 89.0 bits (220), Expect = 3e-22
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 17/207 (8%)
Query: 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKI 70
+ V + + + DKA G LD + D L+V ++ F K+ +
Sbjct: 56 AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM-EVWCDELEVTQELFDKVFNL 114
Query: 71 NFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAA 130
N +F+ + + + GG I+ +SI G+ P A Y A++ R A
Sbjct: 115 NTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFA 170
Query: 131 MEIGKHKIRVNGIARGL-----------HLQDEYPIAVGQERAVKLVREAAPLHRWLDVK 179
++ G + VN IA G H + QE+ + + PL R
Sbjct: 171 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA 230
Query: 180 NDLASTVIYLISDGSRYMTGTTIYVDG 206
D+ V L + S ++ G I + G
Sbjct: 231 -DIGRAVSALCQEESEWINGQVIKLTG 256
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 88.6 bits (219), Expect = 5e-22
Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 19/216 (8%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
K G V ++ ++A +I G LD V + V +EF
Sbjct: 65 KNGSDAACVKANV--GVVEDIVRMFEEAVKIFGKLD-IVCSNSGVVSFGHVKDVTPEEFD 121
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
++ IN +F+ + + ++ L I + P A Y +I
Sbjct: 122 RVFTINTRGQFFVAREAYKHLEIGGRL----ILMGSITGQAKAVPKHAVYSGSKGAIETF 177
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQD-----------EYPIAVGQERAVKLVREAAPLHR 174
R A+++ KI VN +A G D +E + +PL R
Sbjct: 178 ARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR 237
Query: 175 WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210
D+A V +L S+ ++TG I +DG +
Sbjct: 238 VGLPI-DIARVVCFLASNDGGWVTGKVIGIDGGACM 272
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 87.4 bits (216), Expect = 8e-22
Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 6/182 (3%)
Query: 28 EAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87
+ +D + + +D V K ++ ++FK+ + F+ +++ MK
Sbjct: 55 KDLDLLFEKVKEVDILVLN-AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMK 113
Query: 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
E G + + + ++ ++T + E+ + I VN +A G
Sbjct: 114 EKGWGRIVA--ITSFSVISP-IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 170
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207
+ + E K V P+ R + ++AS V +L S+ + Y+TG TI VDG
Sbjct: 171 TETERVK-ELLSEEKKKQVESQIPMRRMAKPE-EIASVVAFLCSEKASYLTGQTIVVDGG 228
Query: 208 QS 209
S
Sbjct: 229 LS 230
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 86.9 bits (214), Expect = 3e-21
Identities = 49/209 (23%), Positives = 80/209 (38%), Gaps = 16/209 (7%)
Query: 16 LDMEEDREGAFDEAVDKACQILGNLDAFVHCY----------TYEGKMQDPLQVGEDEFK 65
L + ++ +D + + G D V+ + + + +
Sbjct: 61 LSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA 120
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII--GAERGLYPGAAAYGACAASIH 123
+L N VAP FL++A RR E A S + PG Y ++
Sbjct: 121 ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALG 180
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
L R AA+E+ IRVN +A GL L + + R PL + +A
Sbjct: 181 GLTRAAALELAPRHIRVNAVAPGLSLLP----PAMPQETQEEYRRKVPLGQSEASAAQIA 236
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQSITR 212
+ +L+S + Y+TGTT+ VDG + R
Sbjct: 237 DAIAFLVSKDAGYITGTTLKVDGGLILAR 265
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 87.1 bits (215), Expect = 3e-21
Identities = 34/206 (16%), Positives = 81/206 (39%), Gaps = 7/206 (3%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ G V + D+ + V + ++ G+ + ++ + ++ + +K
Sbjct: 72 QTGNKVHAIQCDVRD--PDMVQNTVSELIKVAGHPNIVINN-AAGNFISPTERLSPNAWK 128
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+ I F+ +G+++ +++ G + + +T+I + A + +
Sbjct: 129 TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI--YAETGSGFVVPSASAKAGVEAM 186
Query: 126 VRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV-KLVREAAPLHRWLDVKNDLAS 184
++ A E GK+ +R N I G + K + P R V+ +LA+
Sbjct: 187 SKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVE-ELAN 245
Query: 185 TVIYLISDGSRYMTGTTIYVDGAQSI 210
+L SD + ++ G I DG + +
Sbjct: 246 LAAFLCSDYASWINGAVIKFDGGEEV 271
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 87.3 bits (216), Expect = 3e-21
Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 22/202 (10%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
++ V D E E A+D G +D V+ + + ++ ++++
Sbjct: 60 IRRRGGKAVANYDSVEAGEKLVKTALDT----FGRIDVVVNNAGI-LRDRSFSRISDEDW 114
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ +++ + + +A MK+ G I+ S G G A Y A +
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG--IYGNFGQANYSAAKLGLLG 171
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLAS 184
L T +E K+ I N IA + E + L L + +A
Sbjct: 172 LANTLVIEGRKNNIHCNTIAPN-------AGSRMTETVM-----PEDLVEALKPE-YVAP 218
Query: 185 TVIYLISDGSRYMTGTTIYVDG 206
V++L + G V
Sbjct: 219 LVLWLCHESC-EENGGLFEVGA 239
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 85.9 bits (212), Expect = 6e-21
Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 8/193 (4%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
D+ + + + ++ E ++ ++ NF A + L +
Sbjct: 67 RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 126
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
+K S+ V S I L + + A I+Q+ ++ A E K IRVN
Sbjct: 127 YPLLKASQ--NGNVIFLSSIAGFSALPSVSLYSASKGA-INQMTKSLACEWAKDNIRVNS 183
Query: 143 IARGLH----LQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMT 198
+A G+ ++ Q+ + P+ R + ++++ + +L + Y+T
Sbjct: 184 VAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ-EVSALIAFLCFPAASYIT 242
Query: 199 GTTIYVDGAQSIT 211
G I+ DG +
Sbjct: 243 GQIIWADGGFTAN 255
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 84.8 bits (209), Expect = 1e-20
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G D+ E A VD + G +D + Y+G D+F ++
Sbjct: 53 GVEARSYVCDVTS--EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV 110
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
+ IN + +LKAV R+M G + T+ + +G P AAYG +I L
Sbjct: 111 LTINVTGAFHVLKAVSRQMITQNYG--RIVNTASMAGVKG-PPNMAAYGTSKGAIIALTE 167
Query: 128 TAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQ-------ERAVKLVREAAPLH 173
TAA+++ + IRVN I+ G Q E VG + + + + P+
Sbjct: 168 TAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR 227
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
R+ D+ ++ V +L+ D S +MTG + + G
Sbjct: 228 RYGDIN-EIPGVVAFLLGDDSSFMTGVNLPIAG 259
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 83.9 bits (207), Expect = 3e-20
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 10/206 (4%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
K G D+ E+ + + +K G LD V+ + + DE
Sbjct: 52 KYGVETMAFRCDVSNYEEVKKLLEAVKEK----FGKLDTVVNAAGI-NRRHPAEEFPLDE 106
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F++++++N +++ + ++ES I + E P +AY A +
Sbjct: 107 FRQVIEVNLFGTYYVCREAFSLLRESDNPSIINI--GSLTVEEVTMPNISAYAASKGGVA 164
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
L + A E G++ IRVN IA G + + + + PL R + DL
Sbjct: 165 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPE-DLK 223
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQS 209
++L S+ ++Y+TG I+VDG +
Sbjct: 224 GVAVFLASEEAKYVTGQIIFVDGGWT 249
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 82.8 bits (204), Expect = 8e-20
Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 14/208 (6%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G + D+ + V + G +D V+ ++ ++ + +
Sbjct: 50 GVEADGRTCDVRS--VPEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDV 106
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
V+ N + + K V + + G + + G + AA Y A + +
Sbjct: 107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFTK 165
Query: 128 TAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHRWLDV 178
+E+ + I VN + G +++ Y E A + P+ R++
Sbjct: 166 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 225
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDG 206
++A V YLI G+ +T + V G
Sbjct: 226 S-EVAEMVAYLIGPGAAAVTAQALNVCG 252
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 82.5 bits (203), Expect = 1e-19
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
L+ EV+ + E + V + G +D F + EGK EF
Sbjct: 49 LETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEF 108
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
K+V IN + L+ V + M+E +G + + +G RG + Y A +
Sbjct: 109 DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNT--ASVGGIRG-IGNQSGYAAAKHGVVG 165
Query: 125 LVRTAAMEIGKHKIRVNGIARGLHLQD------EYPIAVGQERAVKLVREAAPLHRWLDV 178
L R +A+E G++ IR+N IA G + +A + + P R+ +
Sbjct: 166 LTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEA 225
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209
++A+ V +L+SD + Y+ T + +DG QS
Sbjct: 226 P-EIAAVVAFLLSDDASYVNATVVPIDGGQS 255
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 81.6 bits (201), Expect = 2e-19
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 10/190 (5%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
E E ++ G +D V + + Q + ++++ V+ + P+ L+ AV
Sbjct: 55 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
+MK+ K S + G + + Y + A L + E+G++ I V
Sbjct: 115 ASQMKKRK---SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFA 171
Query: 143 IARGLHLQDEYPIAVGQER------AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRY 196
I ++ P E V V++ L R K +L V +L S Y
Sbjct: 172 IGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQK-ELGELVAFLASGSCDY 230
Query: 197 MTGTTIYVDG 206
+TG ++ G
Sbjct: 231 LTGQVFWLAG 240
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 80.2 bits (197), Expect = 6e-19
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 12/178 (6%)
Query: 42 AFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE-----SKAGGSIV 96
+ E + G + F++++++N + + +L+ M+E G IV
Sbjct: 71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV 130
Query: 97 FLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA 156
S+ G AAY A + L AA E+ IRV +A GL
Sbjct: 131 NTASVAA--FEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL 188
Query: 157 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214
+ +A L + R + + A+ V++++ + + G + +DGA + PR
Sbjct: 189 PEKAKA-SLAAQVPFPPRLGRPE-EYAALVLHILEN--PMLNGEVVRLDGALRM-APR 241
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 79.4 bits (195), Expect = 9e-19
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
A + +A + G L H + + ++K++++N + + +
Sbjct: 63 PKAVEAVFAEALEEFGRLHGVAHFAGV-AHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNG 142
G ++E + + + G A Y A + L RT A+E+ + +RVN
Sbjct: 122 GEVLEEGGSLVLTGSVAGLG------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175
Query: 143 IARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTI 202
+ GL A A + A+PL R + ++A ++L+S+ S Y+TG +
Sbjct: 176 LLPGLIQTP--MTAGLPPWAWEQEVGASPLGRAGRPE-EVAQAALFLLSEESAYITGQAL 232
Query: 203 YVDGAQSI 210
YVDG +SI
Sbjct: 233 YVDGGRSI 240
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 79.7 bits (196), Expect = 1e-18
Identities = 28/205 (13%), Positives = 55/205 (26%), Gaps = 24/205 (11%)
Query: 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKK 66
+ D+ + + + K L +D ++ G + D + ++
Sbjct: 53 PKVNITFHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGA---GILDD------HQIER 102
Query: 67 LVKINFVAPWFLLKAVGRRM--KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQ 124
+ INF A+ ++ GG I + S+ G Y A A++
Sbjct: 103 TIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAIHQVPVYSASKAAVVS 160
Query: 125 LVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKND 181
+ A + I G+ L + + E V L
Sbjct: 161 FTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVA----ELLLSHPTQTSEQ 216
Query: 182 LASTVIYLISDGSRYMTGTTIYVDG 206
+ I G +D
Sbjct: 217 CGQNFVKAIEA---NKNGAIWKLDL 238
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 79.8 bits (196), Expect = 1e-18
Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 10/207 (4%)
Query: 6 KGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
K G V D+ E D A+ + G LD ++ ++ +
Sbjct: 54 KVGGEAIAVKGDVTVESDVINLVQSAIKE----FGKLDVMINNAGL-ENPVSSHEMSLSD 108
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
+ K++ N + + + E+ G+++ ++S+ E+ +P Y A +
Sbjct: 109 WNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV--HEKIPWPLFVHYAASKGGMK 166
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
+ T A+E IRVN I G V P+ + + ++A
Sbjct: 167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPE-EIA 225
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQSI 210
+ +L S + Y+TG T++ DG ++
Sbjct: 226 AVAAWLASSEASYVTGITLFADGGMTL 252
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 78.7 bits (193), Expect = 3e-18
Identities = 44/213 (20%), Positives = 85/213 (39%), Gaps = 15/213 (7%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G + LD+ + + + D V + G++D V+ + +++ + + +L
Sbjct: 50 GPAACAIALDVTD--QASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRL 106
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
IN F+++AV R M G + + RG Y A A++ L +
Sbjct: 107 FAINVSGTLFMMQAVARAMIA-GGRGGKIINMASQAGRRGEAL-VGVYCATKAAVISLTQ 164
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEY---------PIAVGQERAVKLVREAAPLHRWLDV 178
+A + + +H I VN IA G+ + + + + + V A P R
Sbjct: 165 SAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRA 224
Query: 179 KNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211
+ DL I+L + + Y+ T VDG ++
Sbjct: 225 E-DLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 76.0 bits (186), Expect = 3e-17
Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 17/211 (8%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ G V G D+ + A VD A + +G +D V+ + ++ E
Sbjct: 52 QHGVKVLYDGADLSK--GEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKW 107
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
+ ++ F A + + G I+ + S G +AY A +
Sbjct: 108 DAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA--SANKSAYVAAKHGVVGF 165
Query: 126 VRTAAMEIGKHKIRVNGIARG----------LHLQDEYPIAVGQERAVKLVREAAPLHRW 175
+ A+E I N I G + E + A +L+ E P ++
Sbjct: 166 TKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQF 225
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + L T ++L SD + +TGTT+ VDG
Sbjct: 226 VTPE-QLGGTAVFLASDAAAQITGTTVSVDG 255
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 75.1 bits (184), Expect = 4e-17
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 14/199 (7%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
V LD+ + + AVD A G L V+ + E++++
Sbjct: 51 ADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRI 107
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
+ +N + ++AV + MKE GSI+ ++SI G Y A ++ L +
Sbjct: 108 LDVNLTGVFLGIRAVVKPMKE-AGRGSIINISSIEGLAG--TVACHGYTATKFAVRGLTK 164
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
+ A+E+G IRVN I G + V L R + ++++ V+
Sbjct: 165 STALELGPSGIRVNSIHPG-------LVKTPMTDWVPEDIFQTALGRAAEPV-EVSNLVV 216
Query: 188 YLISDGSRYMTGTTIYVDG 206
YL SD S Y TG VDG
Sbjct: 217 YLASDESSYSTGAEFVVDG 235
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 74.4 bits (182), Expect = 6e-17
Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 18/195 (9%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G + + D+ + + G++D V+ + + E++F
Sbjct: 56 GALTDTITADISD--MADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYT 112
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
+ N +FL +A+ M+ +G + + A + + ++ Y LV
Sbjct: 113 MNTNLKGTFFLTQALFALMERQHSGHIFF--ITSVAATKA-FRHSSIYCMSKFGQRGLVE 169
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
T + K +R+ + P AV K+ E + + D+A+ V+
Sbjct: 170 TMRLYARKCNVRITDVQ---------PGAVYTPMWGKVDDEMQA--LMMMPE-DIAAPVV 217
Query: 188 YLISDGSRYMTGTTI 202
SR + I
Sbjct: 218 QAYLQPSRTVVEEII 232
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 73.7 bits (180), Expect = 1e-16
Identities = 49/210 (23%), Positives = 83/210 (39%), Gaps = 15/210 (7%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK 65
+ G V +D+ + AV++A + LG D V+ + +
Sbjct: 47 QAGGHAVAVKVDVSD--RDQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVD 103
Query: 66 KLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQL 125
K+ IN + ++A K+ GG I+ S G P A Y + ++ L
Sbjct: 104 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG--HVGNPELAVYSSSKFAVRGL 161
Query: 126 VRTAAMEIGKHKIRVNGIARGL-------HLQDEYPIAVGQ--ERAVKLVREAAPLHRWL 176
+TAA ++ I VNG G+ + + A G+ + L R
Sbjct: 162 TQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 221
Query: 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + D+A+ V YL S S YMTG ++ +DG
Sbjct: 222 EPE-DVAACVSYLASPDSDYMTGQSLLIDG 250
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 73.3 bits (179), Expect = 2e-16
Identities = 29/209 (13%), Positives = 60/209 (28%), Gaps = 12/209 (5%)
Query: 3 GSLKGGQPVEVVGLDM--EEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPL--Q 58
G+ + V + D+ E + + ++ G +
Sbjct: 54 GAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV 113
Query: 59 VGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGAC 118
E +N + L ++S V S + A + Y G Y A
Sbjct: 114 NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP-YKGWGLYCAG 172
Query: 119 AASIHQLVRTAAMEIGKHKIRVNGIARGL---HLQDEYPIAVGQERAVKLVREAAPLHRW 175
A+ L + A E + +RV A G +Q +++
Sbjct: 173 KAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGAL 230
Query: 176 LDVKNDLASTVIYLISDGSRYMTGTTIYV 204
+D A ++ L+ + + +G +
Sbjct: 231 VDCG-TSAQKLLGLLQKDT-FQSGAHVDF 257
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 72.5 bits (177), Expect = 4e-16
Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 7/207 (3%)
Query: 4 SLKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
G P + G++++ A D A + G ++ V +++ E++
Sbjct: 38 HRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEK 96
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIH 123
F+K++ N + + + R M+ +K G I + G+ A + A +
Sbjct: 97 FEKVINANLTGAFRVAQRASRSMQRNKFGRMIF--IGSVSGLWGIGNQANYAASKAG-VI 153
Query: 124 QLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLA 183
+ R+ A E+ K + N +A G D ER + + P R ++A
Sbjct: 154 GMARSIARELSKANVTANVVAPGYIDTD--MTRALDERIQQGALQFIPAKRVGTPA-EVA 210
Query: 184 STVIYLISDGSRYMTGTTIYVDGAQSI 210
V +L S+ + Y++G I VDG +
Sbjct: 211 GVVSFLASEDASYISGAVIPVDGGMGM 237
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 72.0 bits (176), Expect = 6e-16
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G D+ E D A LG +D V+ G P + +F++
Sbjct: 59 GGQAFACRCDITS--EQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFRRA 114
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
++N + + L + V M+++ V LT A +Y + A+ LVR
Sbjct: 115 YELNVFSFFHLSQLVAPEMEKNG---GGVILTITSMAAENKNINMTSYASSKAAASHLVR 171
Query: 128 TAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI 187
A ++G+ IRVNGIA G L D +V + + + P+ R + D+A+ +
Sbjct: 172 NMAFDLGEKNIRVNGIAPGAILTDALK-SVITPEIEQKMLQHTPIRRLGQPQ-DIANAAL 229
Query: 188 YLISDGSRYMTGTTIYVDG 206
+L S + +++G + V G
Sbjct: 230 FLCSPAASWVSGQILTVSG 248
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (164), Expect = 2e-14
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 62 DEFKKLVKINFVAPWFLLKAVGRRMKES----KAGGSIVFLTSIIGAERGLYPGAAAYGA 117
++F++++ +N + + +++ V M ++ ++ T+ + A G G AAY A
Sbjct: 107 EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-QVGQAAYSA 165
Query: 118 CAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLD 177
I + A ++ IRV IA GL + E+ + P L
Sbjct: 166 SKGGIVGMTLPIARDLAPIGIRVMTIAPGLF--GTPLLTSLPEKVCNFLASQVPFPSRLG 223
Query: 178 VKNDLASTVIYLISDGSRYMTGTTIYV 204
+ A V +I + ++ G I +
Sbjct: 224 DPAEYAHLVQAIIE--NPFLNGEVIRL 248
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 1e-13
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 9/143 (6%)
Query: 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKL 67
G V +D + K +G++ V+ D + + +K
Sbjct: 55 GAKVHTFVVDCSN--REDIYSSAKKVKAEIGDVSILVNNA-GVVYTSDLFATQDPQIEKT 111
Query: 68 VKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127
++N +A ++ KA M ++ G IV + S G P AY + + +
Sbjct: 112 FEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAG--HVSVPFLLAYCSSKFAAVGFHK 168
Query: 128 TAAMEIGKHK---IRVNGIARGL 147
T E+ + ++ +
Sbjct: 169 TLTDELAALQITGVKTTCLCPNF 191
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 1e-13
Identities = 30/195 (15%), Positives = 60/195 (30%), Gaps = 22/195 (11%)
Query: 43 FVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSII 102
+ C G + +GED ++ +N V +L+A MK +G +V T +
Sbjct: 86 VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLV--TGSV 143
Query: 103 GAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL--------------- 147
G G P Y A ++ L + A+ + + ++ I G
Sbjct: 144 GGLMG-LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEE 202
Query: 148 HLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGS---RYMTGTTIYV 204
L + + + + ++A + + RY T
Sbjct: 203 VLDRTDIHTFHRFYQYLAHSKQVFREAAQNPE-EVAEVFLTALRAPKPTLRYFTTERFLP 261
Query: 205 DGAQSITRPRMRSYM 219
+ P +Y+
Sbjct: 262 LLRMRLDDPSGSNYV 276
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 65.1 bits (157), Expect = 2e-13
Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 3/191 (1%)
Query: 21 DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLK 80
+E F + + LG+LD VH + K + E ++ + L++
Sbjct: 65 SKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124
Query: 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRV 140
G S++ T G A++ VR A+++GKH IRV
Sbjct: 125 LTNTLKPLLNNGASVL--TLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV 182
Query: 141 NGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT 200
N ++ G +K APL + + ++ ++ + +YL+S S ++G
Sbjct: 183 NALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE-EVGNAGMYLLSSLSSGVSGE 241
Query: 201 TIYVDGAQSIT 211
+VD +
Sbjct: 242 VHFVDAGYHVM 252
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 65.1 bits (157), Expect = 3e-13
Identities = 54/221 (24%), Positives = 85/221 (38%), Gaps = 22/221 (9%)
Query: 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-------------KMQD 55
PV E V G D V+ +
Sbjct: 68 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVG 127
Query: 56 PLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES---KAGGSIVFLTSIIGAERGLYPGA 112
+ E L N +AP+FL+KA R+ + G + + + G
Sbjct: 128 DREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGY 187
Query: 113 AAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLH-LQDEYPIAVGQERAVKLVREAAP 171
Y ++ L R+AA+E+ +IRVNG+ GL L D+ P AV + R P
Sbjct: 188 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEG-----HRSKVP 242
Query: 172 LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212
L++ +++ VI+L S ++Y+TGT + VDG S+TR
Sbjct: 243 LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 283
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 63.8 bits (154), Expect = 6e-13
Identities = 44/238 (18%), Positives = 79/238 (33%), Gaps = 46/238 (19%)
Query: 12 EVVGLDMEE--------DREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDE 63
++VG+D+ + EG D + +D V C L
Sbjct: 27 QIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG--------LGPQTKV 78
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAG--------------------------GSIVF 97
+V +N+ L+ A +K+ G
Sbjct: 79 LGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK 138
Query: 98 LTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157
+I+ G G AY ++ VR A G+ +R+N IA G +
Sbjct: 139 ARAIVEH-AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197
Query: 158 GQERAVK-LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS-ITRP 213
R + + + P+ R + ++AS + +L+S + Y+ G I +DG + RP
Sbjct: 198 QDPRYGESIAKFVPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAVMRP 254
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.3 bits (153), Expect = 7e-13
Identities = 30/202 (14%), Positives = 58/202 (28%), Gaps = 20/202 (9%)
Query: 14 VGLDMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 71
V + M + D+ + ++LG+ +DA + + + K +
Sbjct: 44 VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQS 103
Query: 72 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 131
+ +KE ++ G PG YG ++HQL ++ A
Sbjct: 104 IWTSTISSHLATKHLKEGGLLTLAGAKAALDG-----TPGMIGYGMAKGAVHQLCQSLAG 158
Query: 132 EIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYL 189
+ + + R A W ++ L T
Sbjct: 159 KNSGMPSGAAAIAVLPV-------TLDTPMNRKS---MPEADFSSWTPLE-FLVETFHDW 207
Query: 190 ISDGSRYMTGTTIYVDGAQSIT 211
I+ R +G+ I V T
Sbjct: 208 ITGNKRPNSGSLIQVVTTDGKT 229
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 58.6 bits (140), Expect = 5e-11
Identities = 37/190 (19%), Positives = 69/190 (36%), Gaps = 5/190 (2%)
Query: 23 EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82
EA + Q G++D VH ++ P + +K A + ++
Sbjct: 103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKP---LLETSRKGYLAAISASSYSFVSL 159
Query: 83 GRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHK-IRVN 141
G + I +ER + + A++ R A E G+ + IRVN
Sbjct: 160 LSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVN 219
Query: 142 GIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTT 201
I+ G + ++ AP+ + L ++ + +L+S + +TG T
Sbjct: 220 TISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTAD-EVGNAAAFLVSPLASAITGAT 278
Query: 202 IYVDGAQSIT 211
IYVD +
Sbjct: 279 IYVDNGLNSM 288
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 1e-10
Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 12 EVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKIN 71
+ + ++ V +A +++G LD + + + +K +++N
Sbjct: 65 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHVRKSMEVN 123
Query: 72 FVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAM 131
F++ L A +K ++ GSIV S + + YP AAY A ++ +
Sbjct: 124 FLSYVVLTVAALPMLK--QSNGSIVV-VSSLAGKVA-YPMVAAYSASKFALDGFFSSIRK 179
Query: 132 EIGKHK--IRVNGIARGLHLQD---------EYPIAVGQERAVKLVREAAPLHRWLDVKN 180
E + + + GL + + A +E + + L + +V
Sbjct: 180 EYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQE-EVYY 238
Query: 181 DLASTVIYLISDGSR----YMTGTTIYVD 205
D + LI + SR ++ T+ +D
Sbjct: 239 DSSLWTTLLIRNPSRKILEFLYSTSYNMD 267
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 54.9 bits (131), Expect = 7e-10
Identities = 19/203 (9%), Positives = 46/203 (22%), Gaps = 19/203 (9%)
Query: 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINF 72
+V + + + +D + ++K +
Sbjct: 45 LVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSV 104
Query: 73 VAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME 132
+ K +K + + A A AA +H L + A +
Sbjct: 105 WSSAIAAKLATTHLKPGG---LLQLTGAA-AAMGPTPSMIGYGMAKAA-VHHLTSSLAAK 159
Query: 133 IGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVI-YL 189
V I + A W + ++ ++ +
Sbjct: 160 DSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLS-FISEHLLKWT 208
Query: 190 ISDGSRYMTGTTIYVDGAQSITR 212
SR +G + + +
Sbjct: 209 TETSSRPSSGALLKITTENGTST 231
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 54.9 bits (131), Expect = 9e-10
Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 19/159 (11%)
Query: 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDE 63
V V+ L + D+ + D V K +I+G L ++ +
Sbjct: 48 IKDSRVHVLPLTVTCDK--SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAV 105
Query: 64 FKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAER---------------GL 108
+ + +N + L + + +K + + S L+ A
Sbjct: 106 IAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSA 165
Query: 109 YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147
AY A+I+ RT A+++ + V G
Sbjct: 166 QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGW 204
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 52.4 bits (124), Expect = 6e-09
Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 29/213 (13%)
Query: 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEF 64
K + ++ +D+ A + L+ + K V E
Sbjct: 49 AKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQEL 108
Query: 65 KKLVKINFVAPWFLLKAVGRRMKESKAG----------GSIVFLTSIIGAERG-LYPGAA 113
++ N V P L KA +K++ +I+ ++SI+G+ +G G
Sbjct: 109 LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY 168
Query: 114 AYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLH 173
AY ++++ ++ ++++ +I + G D + +APL
Sbjct: 169 AYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD-------------MGGSSAPLD 215
Query: 174 RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
++ IS G + DG
Sbjct: 216 V-----PTSTGQIVQTISKLGEKQNGGFVNYDG 243
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 51.3 bits (121), Expect = 1e-08
Identities = 14/57 (24%), Positives = 21/57 (36%)
Query: 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206
+ + + AP+ + +A TV L+SD TG IY DG
Sbjct: 205 ALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADG 261
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 50.7 bits (119), Expect = 3e-08
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 129 AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIY 188
H I N + + A++ + APL + L D+ S +
Sbjct: 244 NRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASF 302
Query: 189 LISDGSRYMTGTTIYVDGAQSI 210
L+S SR +TG TIYVD +I
Sbjct: 303 LLSRESRAITGQTIYVDNGLNI 324
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 32/218 (14%), Positives = 57/218 (26%), Gaps = 67/218 (30%)
Query: 27 DEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86
D + G LD V+ + + +K NF + + +
Sbjct: 69 RALRDFLRKEYGGLDVLVNNAGI-AFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLI 127
Query: 87 KESKAGGSIVFLTSIIG---------------------------------------AERG 107
K G +V ++SI+ +
Sbjct: 128 KP---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK 184
Query: 108 LYPGAAAYGACAASIHQLVRTAAMEIGKH----KIRVNGIARGLHLQDEYPIAVGQERAV 163
++AYG + L R A ++ + KI +N G D + +A
Sbjct: 185 EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD-----MAGPKAT 239
Query: 164 KLVREAAPLHRWLDVKNDLASTVIYL--ISDGSRYMTG 199
K E A T +YL + + G
Sbjct: 240 KSPEEG-------------AETPVYLALLPPDAEGPHG 264
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 41.8 bits (97), Expect = 1e-05
Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 61 EDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAA 120
+ ++ I VA + +G ++ G GA L G A
Sbjct: 109 QAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGA---LGIGGLKLKLHRA 165
Query: 121 SIHQLVRTAAMEIGKHKIRVNGIARGL 147
I +L ++ +I +A+ +
Sbjct: 166 CIAKLFESSEGVFDAEEIY--KLAKEM 190
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 219 | |||
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.98 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.97 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.97 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.97 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.97 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.97 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.96 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.96 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.94 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.83 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.43 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.39 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.11 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.06 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.02 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.01 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 98.95 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 98.92 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 98.87 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 98.86 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 98.81 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.73 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.71 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 98.68 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 98.68 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 98.65 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 98.64 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 98.6 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 98.57 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 98.37 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 98.35 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 98.15 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 98.07 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.83 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 97.4 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 97.35 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 97.3 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 96.71 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 95.38 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 95.2 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 89.95 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 84.42 |
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-46 Score=288.71 Aligned_cols=197 Identities=23% Similarity=0.359 Sum_probs=181.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+. ...++.+++.++|++.+++|+.++++++|.++|+|+
T Consensus 54 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 130 (251)
T d1vl8a_ 54 GVETMAFRCDVSNY--EEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR 130 (251)
T ss_dssp CCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccc
Confidence 56789999999999 999999999999999999999999985 778999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||+++|..+...+ .++...|+++|+|+++|+|+++.|++++|||||+|+||+++|++.......+...+...
T Consensus 131 ~~~-~G~Ii~i~S~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 208 (251)
T d1vl8a_ 131 ESD-NPSIINIGSLTVEEVT-MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYML 208 (251)
T ss_dssp TCS-SCEEEEECCGGGTCCC-SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHH
T ss_pred ccc-cccccccccchhcccc-CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHH
Confidence 876 7999999998775233 67789999999999999999999999999999999999999999887666555555666
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 209 ~~~pl~R~~~pe-dvA~~v~fL~S~~a~~itG~~i~vDGG~ta 250 (251)
T d1vl8a_ 209 KRIPLGRTGVPE-DLKGVAVFLASEEAKYVTGQIIFVDGGWTA 250 (251)
T ss_dssp HTCTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCchhCCCcCcEEEeCcCeeC
Confidence 889999999998 999999999999999999999999999974
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=2.1e-46 Score=287.59 Aligned_cols=197 Identities=23% Similarity=0.223 Sum_probs=167.9
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+++.++|++++++|+.++++++|.++|+|
T Consensus 50 ~g~~~~~~~~Dvs~~--~~v~~~~~~~~~~~G~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 126 (247)
T d2ew8a1 50 LGRRVLTVKCDVSQP--GDVEAFGKQVISTFGRCDILVNNAGIY-PLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGM 126 (247)
T ss_dssp TTCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeeCCCH--HHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHH
Confidence 356899999999999 999999999999999999999999996 78899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ +|+||++||..+..+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......+......
T Consensus 127 ~~~~-~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 203 (247)
T d2ew8a1 127 KRNG-WGRIINLTSTTYWLK--IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP 203 (247)
T ss_dssp HHHT-CEEEEEECCGGGGSC--CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------
T ss_pred HhcC-CCCccccccchhccc--CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH
Confidence 9987 799999999999733 6888999999999999999999999999999999999999999987665544444444
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++|+++|+ |+|++++||+|+.++++|||+|.+|||+..
T Consensus 204 ~~~~~l~r~~~pe-dvA~~v~fL~S~~s~~itG~~i~vDGG~~~ 246 (247)
T d2ew8a1 204 NMLQAIPRLQVPL-DLTGAAAFLASDDASFITGQTLAVDGGMVR 246 (247)
T ss_dssp CTTSSSCSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred HHhccCCCCCCHH-HHHHHHHHHhCchhcCCcCCeEEECCCEec
Confidence 4456899999998 999999999999999999999999999864
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=3.6e-46 Score=288.19 Aligned_cols=199 Identities=19% Similarity=0.278 Sum_probs=182.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|+ ++++++++++.+++|++|++|||||+. ...++.+++.++|++++++|+.++++++|.++|+|+
T Consensus 56 g~~~~~~~~Dvt~~--~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~ 132 (261)
T d1geea_ 56 GGEAIAVKGDVTVE--SDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132 (261)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCEeeccceec-CCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhc
Confidence 56899999999999 999999999999999999999999986 678899999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++.+++|+++||.++.. + .+...+|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......+...+...
T Consensus 133 ~~~~g~~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~ 210 (261)
T d1geea_ 133 ENDIKGTVINMSSVHEKI-P-WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE 210 (261)
T ss_dssp HTTCCCEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHH
T ss_pred cccccccccccccchhcc-c-CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHH
Confidence 877556799999999873 3 68899999999999999999999999999999999999999999877655555555566
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
...|++|+++|+ |+|++++||+|+.++++|||+|.+|||+++.-
T Consensus 211 ~~~pl~R~~~pe-diA~~v~fL~S~~s~~itG~~i~vDGG~sl~p 254 (261)
T d1geea_ 211 SMIPMGYIGEPE-EIAAVAAWLASSEASYVTGITLFADGGMTLYP 254 (261)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCG
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCchhcCCcCCeEEECCCeeCCC
Confidence 889999999998 99999999999999999999999999999863
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=5.3e-46 Score=286.92 Aligned_cols=199 Identities=26% Similarity=0.387 Sum_probs=179.1
Q ss_pred CCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 6 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
.++.++..++||++|+ ++++++++++.+++|++|+||||||+..+..++.+++.++|++++++|+.++++++|+++|+
T Consensus 52 ~~~~~~~~~~~Dvt~~--~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 129 (258)
T d1iy8a_ 52 APDAEVLTTVADVSDE--AQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKI 129 (258)
T ss_dssp CTTCCEEEEECCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeccCCCH--HHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhh
Confidence 3566899999999999 99999999999999999999999998656678999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------h
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------Q 159 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~ 159 (219)
|++++ +|+||++||..+.. + .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++...... .
T Consensus 130 m~~~~-~G~Ii~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~ 206 (258)
T d1iy8a_ 130 MREQG-SGMVVNTASVGGIR-G-IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENP 206 (258)
T ss_dssp HHHHT-CCEEEEECCGGGTS-B-CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCH
T ss_pred hhhhc-CCCCcccccHhhcc-C-CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccH
Confidence 99876 89999999999973 3 68899999999999999999999999999999999999999998654322 2
Q ss_pred HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+...+......|++|+++|+ |+|++++||+|+.++++|||+|.||||++.
T Consensus 207 ~~~~~~~~~~~pl~R~~~p~-dvA~~v~fL~S~~s~~itG~~i~VDGG~sa 256 (258)
T d1iy8a_ 207 RKAAEEFIQVNPSKRYGEAP-EIAAVVAFLLSDDASYVNATVVPIDGGQSA 256 (258)
T ss_dssp HHHHHHHHTTCTTCSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence 33344455778999999998 999999999999999999999999999974
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=3.5e-46 Score=285.74 Aligned_cols=194 Identities=22% Similarity=0.332 Sum_probs=177.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++|.++|+|+
T Consensus 50 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 126 (244)
T d1edoa_ 50 GGQAITFGGDVSKE--ADVEAMMKTAIDAWGTIDVVVNNAGIT-RDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM 126 (244)
T ss_dssp TCEEEEEECCTTSH--HHHHHHHHHHHHHSSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCH--HHHHHHHHHHHHHcCCCCccccccccc-cccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 56889999999999 999999999999999999999999986 778999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||.++... .++...|+++|+|+.+|+|+++.|++++|||+|+|+||+++|++..... +...+...
T Consensus 127 ~~~-~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~ 201 (244)
T d1edoa_ 127 KKR-KGRIINIASVVGLIG--NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG--EDMEKKIL 201 (244)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--HHHHHHHH
T ss_pred HcC-CcEEEEEcChhhcCC--CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh--HHHHHHHH
Confidence 876 899999999999743 6889999999999999999999999999999999999999999876542 23344455
Q ss_pred hhcCCCCCCCCchhHHHHHHHhc-cCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLI-SDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++|+++|+ |+|++++||+ |+.++++|||++.+|||+++
T Consensus 202 ~~~pl~R~~~p~-dvA~~v~fLa~S~~a~~itG~~i~vdGG~si 244 (244)
T d1edoa_ 202 GTIPLGRTGQPE-NVAGLVEFLALSPAASYITGQAFTIDGGIAI 244 (244)
T ss_dssp TSCTTCSCBCHH-HHHHHHHHHHHCSGGGGCCSCEEEESTTTTC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHHCCchhcCCcCCeEEeCCCeeC
Confidence 789999999998 9999999996 89999999999999999874
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.1e-46 Score=284.19 Aligned_cols=194 Identities=23% Similarity=0.364 Sum_probs=177.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+...++||++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|+++|+|+
T Consensus 49 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 125 (243)
T d1q7ba_ 49 GANGKGLMLNVTDP--ASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMM 125 (243)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHTCSCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEecCH--HHhhhhhhhhhcccCCcceehhhhhhc-cccccccccccccccccceeechhhhhHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 778999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+.. + .++...|+++|+|+++|+|+++.|++++|||||+|+||+++|++.....++ ..+...
T Consensus 126 ~~~-~G~II~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~ 200 (243)
T d1q7ba_ 126 KKR-HGRIITIGSVVGTM-G-NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD--QRAGIL 200 (243)
T ss_dssp HHT-CEEEEEECCHHHHH-C-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--HHHHHH
T ss_pred HcC-CCEeeeecchhhcC-C-CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh--HHHHHH
Confidence 876 79999999999973 3 688999999999999999999999999999999999999999987664332 233444
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++|+++|+ |+|+++.||+|+.++++|||+|.+|||+++
T Consensus 201 ~~~pl~R~~~pe-dvA~~v~fL~S~~s~~itGq~i~vdGG~~~ 242 (243)
T d1q7ba_ 201 AQVPAGRLGGAQ-EIANAVAFLASDEAAYITGETLHVNGGMYM 242 (243)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred hcCCCCCCCCHH-HHHHHHHHHhCchhcCCcCCeEEECCCeEe
Confidence 778999999998 999999999999999999999999999986
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.4e-45 Score=282.29 Aligned_cols=193 Identities=23% Similarity=0.349 Sum_probs=173.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++++|++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++|+++|+|+
T Consensus 58 g~~~~~~~~Dvt~~--~~v~~~~~~~~~~~g~iDilvnnag~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 134 (251)
T d2c07a1 58 GYESSGYAGDVSKK--EEISEVINKILTEHKNVDILVNNAGIT-RDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI 134 (251)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHCSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHhcCCceeeeeccccc-cccccccccHHHHhhhheeeehhhhhhhhhcCcccc
Confidence 56899999999999 999999999999999999999999986 778899999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+... .+...+|+++|+|+++|+|++++|++++|||||+|+||+++|++..... +...+...
T Consensus 135 ~~~-~G~IVnisS~~~~~~--~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~--~~~~~~~~ 209 (251)
T d2c07a1 135 NNR-YGRIINISSIVGLTG--NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS--EQIKKNII 209 (251)
T ss_dssp HHT-CEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC--HHHHHHHH
T ss_pred cCC-CeEEEEECCHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC--HHHHHHHH
Confidence 887 899999999999733 6889999999999999999999999999999999999999999987653 23344455
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
...|++|+++|+ |+|++++||+|+.++++|||+|.+|||++
T Consensus 210 ~~~pl~R~~~pe-dvA~~v~fL~S~~s~~itG~~i~vDGG~s 250 (251)
T d2c07a1 210 SNIPAGRMGTPE-EVANLACFLSSDKSGYINGRVFVIDGGLS 250 (251)
T ss_dssp TTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence 789999999998 99999999999999999999999999986
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=2.6e-45 Score=282.99 Aligned_cols=198 Identities=24% Similarity=0.398 Sum_probs=178.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++..++||++|+ ++++++++++.+++|++|++|||||+. ...++.+++.++|++.+++|+.++++++|.+.|.|.
T Consensus 50 ~~~~~~~~~Dvt~~--~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~ 126 (256)
T d1k2wa_ 50 GPAACAIALDVTDQ--ASIDRCVAELLDRWGSIDILVNNAALF-DLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMI 126 (256)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEeeCCCH--HHHHHHHHHHHHHhCCccEEEeecccc-cccccccCCHHHHHhhhceeeeccccchhhccchhH
Confidence 56789999999999 999999999999999999999999986 678999999999999999999999999999999877
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++++|+||++||..+.. + .+....|+++|+|+++|+|+++.|++++|||||+|+||+++|++......
T Consensus 127 ~~~~~g~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~ 204 (256)
T d1k2wa_ 127 AGGRGGKIINMASQAGRR-G-EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLP 204 (256)
T ss_dssp HHTSCEEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCC
T ss_pred HhccCCccccccchhhcc-c-cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCC
Confidence 765479999999999973 3 68899999999999999999999999999999999999999998654322
Q ss_pred hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||+++.
T Consensus 205 ~~~~~~~~~~~~PlgR~~~p~-evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 205 RGEKKRQVGAAVPFGRMGRAE-DLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp TTHHHHHHHHHSTTSSCBCHH-HHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred hHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 223334445778999999998 9999999999999999999999999999874
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.9e-45 Score=280.40 Aligned_cols=195 Identities=23% Similarity=0.336 Sum_probs=170.6
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++..++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.+++.++|.++|+|
T Consensus 43 ~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 119 (237)
T d1uzma1 43 APKGLFGVEVDVTDS--DAVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSM 119 (237)
T ss_dssp CCTTSEEEECCTTCH--HHHHHHHHHHHHHHSSCSEEEEECSCC-C-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hhcCceEEEEecCCH--HHHHHHHHHHHHhcCCceEEEeeeccc-ccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcc
Confidence 345678899999999 999999999999999999999999986 67899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ +|+||++||..+. .+ .++...|+++|+|+++|+|+++.|++++|||||+|+||+++|++.... .+...+..
T Consensus 120 ~~~~-~g~Iv~isS~~~~-~~-~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~ 194 (237)
T d1uzma1 120 QRNK-FGRMIFIGSVSGL-WG-IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGA 194 (237)
T ss_dssp HHTT-CEEEEEECCCCC-------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHH
T ss_pred cccC-CCceEEEcchhhc-cC-CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHH
Confidence 9987 7999999999997 33 688999999999999999999999999999999999999999987654 23334445
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
....|++|+++|+ |+|+++.||+|++++++|||+|.+|||+++
T Consensus 195 ~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~itG~~i~vdGG~~m 237 (237)
T d1uzma1 195 LQFIPAKRVGTPA-EVAGVVSFLASEDASYISGAVIPVDGGMGM 237 (237)
T ss_dssp GGGCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCeEEECCCCCC
Confidence 5789999999998 999999999999999999999999999875
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.9e-45 Score=284.51 Aligned_cols=196 Identities=23% Similarity=0.303 Sum_probs=171.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+. ...++.+.+.++|++++++|+.++++++|.++|+|+
T Consensus 54 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~ 130 (260)
T d1x1ta1 54 GVKVLYDGADLSKG--EAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMK 130 (260)
T ss_dssp TSCEEEECCCTTSH--HHHHHHHHHHHHHHSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCH--HHHHHHHHHHHHHhCCCcEEEeecccc-cCCchhhhhHHhhhhhhhccccccccccchhhhhHh
Confidence 56899999999999 999999999999999999999999986 678999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc---------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--------- 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--------- 158 (219)
+++ .|+||++||..+... .+++..|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......
T Consensus 131 ~~~-~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 207 (260)
T d1x1ta1 131 KQG-FGRIINIASAHGLVA--SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVD 207 (260)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred hcC-CceEeecccccceec--cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCC
Confidence 886 799999999999733 68899999999999999999999999999999999999999998765432
Q ss_pred -hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 -QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.+...+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 208 ~~~~~~~~~~~~~Pl~R~g~pe-diA~~v~fL~S~~a~~itG~~i~vDGG~ta 259 (260)
T d1x1ta1 208 QETAARELLSEKQPSLQFVTPE-QLGGTAVFLASDAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp -------CHHHHCTTCCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence 112223345778999999998 999999999999999999999999999863
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=1.4e-45 Score=283.67 Aligned_cols=198 Identities=23% Similarity=0.353 Sum_probs=178.3
Q ss_pred CCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 6 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
..+.++.+++||++|+ ++++++++++.+++|++|+||||||.. ...++.+++.++|++++++|+.++++++|.++|+
T Consensus 51 ~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDiLVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~ 127 (251)
T d1zk4a1 51 GTPDQIQFFQHDSSDE--DGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp CCTTTEEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEccCCCH--HHHHHHHHHHHHHhCCceEEEeccccc-cccchhcccccchhhhccccccccchhHHHHHHH
Confidence 4466899999999999 999999999999999999999999996 7789999999999999999999999999999999
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHH--hCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAME--IGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e--~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
|++++.+|+||++||..+.. + .+....|+++|+|+.+|+|+++.| ++++|||||+|+||+++|++.......+...
T Consensus 128 m~~~~~gg~Ii~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 205 (251)
T d1zk4a1 128 MKNKGLGASIINMSSIEGFV-G-DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM 205 (251)
T ss_dssp HTTSSSCEEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH
T ss_pred HHhcCCCCceEeeeccceec-c-CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHH
Confidence 99887456999999999973 3 688999999999999999999998 5689999999999999999877655444443
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.. ....|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 206 ~~-~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~itG~~i~vDGG~ta 250 (251)
T d1zk4a1 206 SQ-RTKTPMGHIGEPN-DIAYICVYLASNESKFATGSEFVVDGGYTA 250 (251)
T ss_dssp TS-TTTCTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HH-HhCCCCCCCcCHH-HHHHHHHHHhCchhCCCcCcEEEECccccc
Confidence 33 3678999999998 999999999999999999999999999863
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.1e-45 Score=281.95 Aligned_cols=194 Identities=26% Similarity=0.398 Sum_probs=173.9
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+..+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++|+++|+|+++
T Consensus 49 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 125 (248)
T d2d1ya1 49 GGAFFQVDLEDE--RERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 125 (248)
T ss_dssp TCEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEeCCCH--HHHHHHHHHHHHhcCCCCeEEEeCcCC-CCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc
Confidence 346789999999 999999999999999999999999986 67899999999999999999999999999999999987
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKL 165 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~ 165 (219)
+ +|+||+++|..+.. + .+....|+++|+|+.+|+|++++|++++|||||+|+||+++|++...... .+...+.
T Consensus 126 ~-~G~Ii~isS~~~~~-~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~ 202 (248)
T d2d1ya1 126 G-GGAIVNVASVQGLF-A-EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRD 202 (248)
T ss_dssp T-CEEEEEECCGGGTS-B-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHH
T ss_pred c-cccccccccccccc-c-ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHH
Confidence 6 79999999999973 3 68999999999999999999999999999999999999999997654322 2233344
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.....|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 203 ~~~~~pl~R~~~pe-dia~~v~fL~S~~s~~itG~~i~vDGG~ta 246 (248)
T d2d1ya1 203 WEDLHALRRLGKPE-EVAEAVLFLASEKASFITGAILPVDGGMTA 246 (248)
T ss_dssp HHTTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhcCCCCCCcCHH-HHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence 55778999999998 999999999999999999999999999964
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.3e-45 Score=280.06 Aligned_cols=194 Identities=24% Similarity=0.376 Sum_probs=176.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ ++++++++++.+++|++|++|||||+. ...++ +.+.++|++++++|+.++++++|.++|+|+
T Consensus 59 g~~~~~~~~Dvs~~--~~~~~~~~~~~~~~g~iDilvnnAG~~-~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 134 (255)
T d1fmca_ 59 GGQAFACRCDITSE--QELSALADFAISKLGKVDILVNNAGGG-GPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEME 134 (255)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHcCCCCEeeeCCcCC-CCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhc
Confidence 56899999999999 999999999999999999999999985 44554 789999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+.. + .+++..|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......++..... .
T Consensus 135 ~~~-~g~Ii~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~-~ 210 (255)
T d1fmca_ 135 KNG-GGVILTITSMAAEN-K-NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM-L 210 (255)
T ss_dssp HHT-CEEEEEECCGGGTC-C-CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH-H
T ss_pred ccc-ccccccccccchhc-c-ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHH-H
Confidence 987 78999999999873 3 688999999999999999999999999999999999999999988766555544444 4
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+..|++|+++|+ |+|++++||+|+.++++|||+|.+|||+..
T Consensus 211 ~~~pl~R~g~pe-dvA~~v~fL~S~~s~~itG~~i~vDGG~~~ 252 (255)
T d1fmca_ 211 QHTPIRRLGQPQ-DIANAALFLCSPAASWVSGQILTVSGGGVQ 252 (255)
T ss_dssp HTCSSCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred hcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCEEEECcCccc
Confidence 789999999998 999999999999999999999999999853
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=3.1e-45 Score=282.49 Aligned_cols=197 Identities=25% Similarity=0.321 Sum_probs=177.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+. +..++.++++++|++++++|+.++++++|+++|+|+
T Consensus 49 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~ 125 (255)
T d1gega_ 49 GGHAVAVKVDVSDR--DQVFAAVEQARKTLGGFDVIVNNAGVA-PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFK 125 (255)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHTTCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHHhCCccEEEeccccc-ccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhh
Confidence 56899999999999 999999999999999999999999985 778999999999999999999999999999999988
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch--------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ-------- 159 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~-------- 159 (219)
+++.+++|+++||..+. .+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......
T Consensus 126 ~~~~~g~Iv~isS~~~~-~~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 203 (255)
T d1gega_ 126 KEGHGGKIINACSQAGH-VG-NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 203 (255)
T ss_dssp HHTSCEEEEEECCGGGT-SC-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCC
T ss_pred hhccccccccccchhhc-cc-CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhccc
Confidence 87657899999999987 33 689999999999999999999999999999999999999999986653221
Q ss_pred -HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 160 -ERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+.......+..|++|+++|+ |+|++++||+|+.++++|||++.+|||+.+
T Consensus 204 ~~~~~~~~~~~~pl~R~~~pe-evA~~v~fL~S~~a~~itG~~i~vDGG~~~ 254 (255)
T d1gega_ 204 LGYGTAEFAKRITLGRLSEPE-DVAACVSYLASPDSDYMTGQSLLIDGGMVF 254 (255)
T ss_dssp TTHHHHHHHTTCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred chhHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence 12233344778999999998 999999999999999999999999999865
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=7.2e-45 Score=279.95 Aligned_cols=197 Identities=21% Similarity=0.314 Sum_probs=177.2
Q ss_pred EEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCC
Q 027744 13 VVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAG 92 (219)
Q Consensus 13 ~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 92 (219)
++++|++++ ++++++++++.+++|++|++|||||+.....++.+.+.++|++.+++|+.++++++|.++|+|++++ +
T Consensus 47 ~~~~dv~~~--~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~ 123 (252)
T d1zmta1 47 YPQLKPMSE--QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-S 123 (252)
T ss_dssp CTTSEECCC--CSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred EEEeccCCH--HHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-c
Confidence 457999999 9999999999999999999999999865668899999999999999999999999999999999887 8
Q ss_pred CeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc------hHHHHHHH
Q 027744 93 GSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG------QERAVKLV 166 (219)
Q Consensus 93 g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~------~~~~~~~~ 166 (219)
|+||++||..+... .+....|+++|+|+.+|+|++++|++++|||||+|+||+++|++...... .+...+..
T Consensus 124 G~IV~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~ 201 (252)
T d1zmta1 124 GHIIFITSATPFGP--WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHV 201 (252)
T ss_dssp CEEEEECCSTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHH
T ss_pred ceeecccccccccc--cccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHH
Confidence 99999999998633 68889999999999999999999999999999999999999998765433 22334445
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCCc
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPRM 215 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~~ 215 (219)
.+..|++|+++|+ |+|++++||+|+.++++|||+|.+|||+++..+|+
T Consensus 202 ~~~~pl~R~g~pe-dvA~~v~fL~S~~s~~iTG~~i~vdGG~~~~~~~p 249 (252)
T d1zmta1 202 KKVTALQRLGTQK-ELGELVAFLASGSCDYLTGQVFWLAGGFPMIERWP 249 (252)
T ss_dssp HHHSSSSSCBCHH-HHHHHHHHHHTTSCGGGTTCEEEESTTCCCCCCCT
T ss_pred HhcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCCeEEECCCceeCCCCC
Confidence 5889999999998 99999999999999999999999999999876654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.4e-45 Score=281.43 Aligned_cols=197 Identities=23% Similarity=0.332 Sum_probs=150.0
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++..+.||++++ ++++++++++.+++ |++|++|||||.. ...++.+.+.++|++++++|+.++++++|.++|+|
T Consensus 56 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~g~idilvnnAG~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 132 (259)
T d1xq1a_ 56 GFQVTGSVCDASLR--PEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLL 132 (259)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeccCCCH--HHHHHHHHHHHHHhCCCccccccccccc-CCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcc
Confidence 45899999999999 99999999999998 6899999999986 67899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ .|+||++||..+... .++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......++. .+..
T Consensus 133 ~~~~-~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~-~~~~ 208 (259)
T d1xq1a_ 133 KASG-CGNIIFMSSIAGVVS--ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF-KKVV 208 (259)
T ss_dssp HHHS-SCEEEEEC------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------
T ss_pred cccc-ccccccccccccccc--ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH-HHHH
Confidence 9876 799999999999733 57889999999999999999999999999999999999999999876554433 3444
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
....|++|+++|+ |||++++||+|+.++++|||+|.+|||+++..
T Consensus 209 ~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~g 253 (259)
T d1xq1a_ 209 ISRKPLGRFGEPE-EVSSLVAFLCMPAASYITGQTICVDGGLTVNG 253 (259)
T ss_dssp ---------CCGG-GGHHHHHHHTSGGGTTCCSCEEECCCCEEETT
T ss_pred HhCCCCCCCcCHH-HHHHHHHHHhCchhcCCcCcEEEeCCCEECCC
Confidence 4778999999998 99999999999999999999999999998764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=8.7e-45 Score=280.33 Aligned_cols=196 Identities=20% Similarity=0.284 Sum_probs=175.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH--
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR-- 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-- 85 (219)
+.++.+++||++|+ ++++++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.++++++|+++|+
T Consensus 50 g~~~~~~~~Dvs~~--~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~ 126 (257)
T d2rhca1 50 GVEADGRTCDVRSV--PEIEALVAAVVERYGPVDVLVNNAGRP-GGGATAELADELWLDVVETNLTGVFRVTKQVLKAGG 126 (257)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTS
T ss_pred CCcEEEEEeecCCH--HHHHHHHHHHHHHhCCCCEEEeccccc-CCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHH
Confidence 56899999999999 999999999999999999999999986 6789999999999999999999999999999997
Q ss_pred HHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--------
Q 027744 86 MKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-------- 157 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-------- 157 (219)
|++++ .|+||+++|..+.. + .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.....
T Consensus 127 ~~~~~-~g~Ii~i~S~~~~~-~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~ 203 (257)
T d2rhca1 127 MLERG-TGRIVNIASTGGKQ-G-VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWE 203 (257)
T ss_dssp HHHHT-EEEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTT
T ss_pred HHhcC-Cccccccccccccc-c-cccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcc
Confidence 45554 68999999999973 3 6889999999999999999999999999999999999999999865432
Q ss_pred -chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 -GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..+...+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 204 ~~~~e~~~~~~~~~PlgR~~~pe-dia~~v~fL~S~~s~~itG~~i~vDGG~~~ 256 (257)
T d2rhca1 204 VSTEEAFDRITARVPIGRYVQPS-EVAEMVAYLIGPGAAAVTAQALNVCGGLGN 256 (257)
T ss_dssp CCHHHHHHHHHTTSTTSSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred cChHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCCcCceEEECcCccc
Confidence 1233344455789999999998 999999999999999999999999999864
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.3e-44 Score=276.55 Aligned_cols=189 Identities=27% Similarity=0.386 Sum_probs=173.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||.. ...++.+++.++|++++++|+.++++++|.+.|.|+
T Consensus 51 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~idilinnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 127 (244)
T d1nffa_ 51 ADAARYVHLDVTQP--AQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMK 127 (244)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hCcceEEEeecCCH--HHHHHHHHHHHHHhCCCeEEEECCccc-CCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHH
Confidence 45788999999999 999999999999999999999999986 778999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+. .+ .+....|+++|+|+++|+|++++|++++|||||+|+||+++|++....... .
T Consensus 128 ~~~-~G~Ii~isS~~~~-~~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-------~ 197 (244)
T d1nffa_ 128 EAG-RGSIINISSIEGL-AG-TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-------I 197 (244)
T ss_dssp HHT-CEEEEEECCGGGT-SC-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-------C
T ss_pred hcC-cceEEeccccccc-cc-cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-------H
Confidence 887 7999999999997 33 688999999999999999999999999999999999999999987653322 1
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++|+++|+ |+|++++||+|+.++++|||++.+|||+..
T Consensus 198 ~~~pl~R~~~p~-diA~~v~fL~s~~s~~itG~~i~vDGG~~a 239 (244)
T d1nffa_ 198 FQTALGRAAEPV-EVSNLVVYLASDESSYSTGAEFVVDGGTVA 239 (244)
T ss_dssp SCCSSSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HhccccCCCCHH-HHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence 457999999998 999999999999999999999999999964
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=3.1e-44 Score=277.52 Aligned_cols=194 Identities=27% Similarity=0.431 Sum_probs=175.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++.++||++|+ ++++++++++.+++|++|++|||||......++.+++.++|++++++|+.++++++|+++|+|+
T Consensus 53 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~ 130 (260)
T d1zema1 53 GVEARSYVCDVTSE--EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMI 130 (260)
T ss_dssp TSCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCH--HHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhh
Confidence 56899999999999 9999999999999999999999999865667899999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------- 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----------- 156 (219)
+++ .|+||++||..+.. + .+.+..|+++|+|+.+|+|+++.|++++|||||+|+||+|.|++....
T Consensus 131 ~~~-~G~II~isS~~~~~-~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~ 207 (260)
T d1zema1 131 TQN-YGRIVNTASMAGVK-G-PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQ 207 (260)
T ss_dssp HHT-CEEEEEECCHHHHS-C-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCT
T ss_pred hhc-CCCCCeeechhhcc-C-CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhccc
Confidence 876 89999999999973 3 688999999999999999999999999999999999999999975432
Q ss_pred ---cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 157 ---VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
...+...+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||
T Consensus 208 ~~~~~~~~~~~~~~~~~Pl~R~g~pe-dvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 208 YFSTDPKVVAQQMIGSVPMRRYGDIN-EIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TSCSSHHHHHHHHHHTSTTSSCBCGG-GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred ccccCHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 11334445555788999999998 999999999999999999999999998
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.4e-44 Score=273.69 Aligned_cols=191 Identities=28% Similarity=0.428 Sum_probs=172.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+++.++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++.+++|+.++++++|.++|+|+++
T Consensus 50 ~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 126 (242)
T d1ulsa_ 50 GAHPVVMDVADP--ASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (242)
T ss_dssp TCEEEECCTTCH--HHHHHHHHHHHHHHSSCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCeEEEEecCCH--HHHHHHHHHHHHhcCCceEEEECCccc-ccCchhhCcchhhhccccccchhhhhhhhhcccccccc
Confidence 567899999999 999999999999999999999999986 67899999999999999999999999999999999887
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ ++.|+++||.. . .+ .++..+|+++|+|+.+|+|+++.|++++|||||+|+||+++|++..... +...+.....
T Consensus 127 ~-~~~i~~~ss~~-~-~~-~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~--~~~~~~~~~~ 200 (242)
T d1ulsa_ 127 N-PGSIVLTASRV-Y-LG-NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP--EKVREKAIAA 200 (242)
T ss_dssp C-CEEEEEECCGG-G-GC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC--HHHHHHHHHT
T ss_pred c-cceeeeecccc-c-cC-CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC--HHHHHHHHhc
Confidence 6 67777777643 3 33 6889999999999999999999999999999999999999999987642 3334445588
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.|++|+++|+ |+|++++||+|+.++++|||++.+|||+++
T Consensus 201 ~pl~R~~~pe-dia~~v~fL~S~~s~~itG~~i~vDGG~t~ 240 (242)
T d1ulsa_ 201 TPLGRAGKPL-EVAYAALFLLSDESSFITGQVLFVDGGRTI 240 (242)
T ss_dssp CTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred CCCCCCCCHH-HHHHHHHHHhchhhCCCCCcEEEECCCccC
Confidence 9999999998 999999999999999999999999999986
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=3.8e-44 Score=276.78 Aligned_cols=198 Identities=26% Similarity=0.394 Sum_probs=177.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhC-CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILG-NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++++++||++|+ ++++++++++.++++ ++|++|||||+. ...++.+.+.++|++++++|+.++++++|.++|+|
T Consensus 56 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~~~~idilvnnAG~~-~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 132 (259)
T d2ae2a_ 56 GFKVEASVCDLSSR--SERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFL 132 (259)
T ss_dssp TCEEEEEECCTTCH--HHHHHHHHHHHHHTTTCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCceEEEeeCCCH--HHHHHHHHHHHHHhCCCceEEEECCcee-ccCccccCCHHHHHHHHhcccceeEEEEeeccchh
Confidence 56889999999999 999999999999987 799999999986 77899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH---HHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE---RAV 163 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~ 163 (219)
++++ +|+||++||..+... .+....|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......+ ...
T Consensus 133 ~~~~-~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 209 (259)
T d2ae2a_ 133 KASE-RGNVVFISSVSGALA--VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENL 209 (259)
T ss_dssp HHTS-SEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHH
T ss_pred hhhc-ccccccccccccccc--cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHH
Confidence 9877 799999999999733 6889999999999999999999999999999999999999999876544332 222
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||+....
T Consensus 210 ~~~~~~~pl~R~g~pe-dvA~~v~fL~S~~s~~itG~~i~VDGG~~a~~ 257 (259)
T d2ae2a_ 210 NKLIDRCALRRMGEPK-ELAAMVAFLCFPAASYVTGQIIYVDGGLMANC 257 (259)
T ss_dssp HHHHHTSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred HHHHhcCCCCCCcCHH-HHHHHHHHHhCchhCCCcCcEEEECCCeEeeC
Confidence 3334678999999998 99999999999999999999999999997643
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-44 Score=276.33 Aligned_cols=194 Identities=19% Similarity=0.318 Sum_probs=171.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.+++||++|+ ++++++++++.+++|++|++|||||......++.+.+.++|++++++|+.+++.++|.++|+|++
T Consensus 51 ~~~~~~~~Dvs~~--~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~ 128 (250)
T d1ydea1 51 PGAVFILCDVTQE--DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128 (250)
T ss_dssp TTEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh
Confidence 4678999999999 99999999999999999999999997645677889999999999999999999999999999987
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVK 164 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~ 164 (219)
+ +|+||++||..+... .+....|+++|+|+.+|+|++++|++++|||||+|+||+|+|++...... .+...+
T Consensus 129 ~--~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 204 (250)
T d1ydea1 129 S--QGNVINISSLVGAIG--QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIR 204 (250)
T ss_dssp H--TCEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHH
T ss_pred C--CCCCccccccccccc--ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHH
Confidence 5 489999999999743 68899999999999999999999999999999999999999998654321 222223
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
......|++|+++|+ |+|++++||+|+ ++++|||+|.+|||+++
T Consensus 205 ~~~~~~pl~R~g~p~-eva~~v~fL~Sd-a~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 205 EGMLAQPLGRMGQPA-EVGAAAVFLASE-ANFCTGIELLVTGGAEL 248 (250)
T ss_dssp HHHHTSTTSSCBCHH-HHHHHHHHHHHH-CTTCCSCEEEESTTTTS
T ss_pred HHHhcCCCCCCCCHH-HHHHHHHHHhCc-cCCCcCCeEEECCCccc
Confidence 333667999999998 999999999996 78999999999999986
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.8e-44 Score=277.31 Aligned_cols=194 Identities=26% Similarity=0.353 Sum_probs=173.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+.++++++|.++|+|+
T Consensus 50 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~ 126 (254)
T d1hdca_ 50 GDAARYQHLDVTIE--EDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMK 126 (254)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcccCCH--HHHHHHHHHHHHHcCCccEEEecCccc-cccccccccccccchhhhHHhhHHHHHHHHHHHHHh
Confidence 46789999999999 999999999999999999999999986 778999999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+++ +|+||++||..+... .++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++........ .+...
T Consensus 127 ~~~-~G~II~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~ 201 (254)
T d1hdca_ 127 DAG-GGSIVNISSAAGLMG--LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ--GEGNY 201 (254)
T ss_dssp HHT-CEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC--STTSC
T ss_pred hcC-CCeecccccchhccc--ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH--HHHHH
Confidence 887 899999999999733 6889999999999999999999999999999999999999999876543321 11222
Q ss_pred hhcCCCCCCC-CchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAPLHRWLD-VKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...|++|++. |+ |+|++++||+|+.++++|||++.+|||++.
T Consensus 202 ~~~pl~R~g~~Pe-dvA~~v~fL~S~~a~~itG~~i~vDGG~t~ 244 (254)
T d1hdca_ 202 PNTPMGRVGNEPG-EIAGAVVKLLSDTSSYVTGAELAVDGGWTT 244 (254)
T ss_dssp TTSTTSSCB-CHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred hCCCCCCCCCCHH-HHHHHHHHHhchhhCCCCCceEEeCCCccC
Confidence 5678999874 66 999999999999999999999999999875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=3.7e-43 Score=272.76 Aligned_cols=204 Identities=26% Similarity=0.367 Sum_probs=174.8
Q ss_pred CCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 5 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+....++.+++||++|+ ++++++++++.+++|++|++|||||.... ...+.+.+.++|++++++|+.++++++|.++
T Consensus 50 l~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (268)
T d2bgka1 50 IGSPDVISFVHCDVTKD--EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127 (268)
T ss_dssp HCCTTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hcCCCceEEEEccCCCH--HHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence 34456788999999999 99999999999999999999999997533 2357889999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHH
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QER 161 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~ 161 (219)
|+|++++ .|+||+++|..+...+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++...... .+.
T Consensus 128 ~~m~~~~-~g~ii~iss~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 205 (268)
T d2bgka1 128 RVMIPAK-KGSIVFTASISSFTAG-EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR 205 (268)
T ss_dssp HHHGGGT-CEEEEEECCGGGTCCC-TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHH
T ss_pred chHhhcC-CCCccccccccccccc-cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHH
Confidence 9999876 7999999999887332 34456899999999999999999999999999999999999998776533 222
Q ss_pred HHHHH-HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 162 AVKLV-REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 162 ~~~~~-~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
..... ....|++|+++|+ |||++++||+|+.++++|||+|.||||++...|
T Consensus 206 ~~~~~~~~~~~~gr~~~pe-dvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p 257 (268)
T d2bgka1 206 VEELAHQAANLKGTLLRAE-DVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 257 (268)
T ss_dssp HHHHHHHTCSSCSCCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred HHHHHHhccccCCCCcCHH-HHHHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence 22222 2335788999998 999999999999999999999999999988765
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.6e-43 Score=268.02 Aligned_cols=190 Identities=26% Similarity=0.419 Sum_probs=171.1
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++..+.||++|+ +++++++ +++|++|+||||||+. ...++.+++.++|++.+++|+.++++++|.+.|.|.++
T Consensus 51 ~~~~~~~Dv~~~--~~v~~~~----~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 123 (242)
T d1cyda_ 51 GIEPVCVDLGDW--DATEKAL----GGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 123 (242)
T ss_dssp TCEEEECCTTCH--HHHHHHH----TTCCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCH--HHHHHHH----HHcCCCeEEEECCccc-cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh
Confidence 577899999998 7776655 4679999999999986 67899999999999999999999999999999987766
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+.+|+||+++|..+.. + .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......+...+.....
T Consensus 124 ~~~g~ii~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~ 201 (242)
T d1cyda_ 124 GVPGSIVNVSSMVAHV-T-FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER 201 (242)
T ss_dssp TCCEEEEEECCGGGTS-C-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH
T ss_pred cccCcccccchhhccc-c-CCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhc
Confidence 5479999999998863 3 6889999999999999999999999999999999999999999987766666666666688
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.|++|+++|+ |+|++++||+|+.++++|||+|.+|||+.
T Consensus 202 ~pl~R~~~pe-eva~~v~fL~S~~s~~itG~~i~vDGG~~ 240 (242)
T d1cyda_ 202 HPLRKFAEVE-DVVNSILFLLSDRSASTSGGGILVDAGYL 240 (242)
T ss_dssp STTSSCBCHH-HHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred CCCCCCcCHH-HHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence 9999999998 99999999999999999999999999975
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-43 Score=267.25 Aligned_cols=190 Identities=23% Similarity=0.353 Sum_probs=170.7
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
.+..+.+|++|+ +++++++ +++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|.|.++
T Consensus 53 ~~~~~~~Dv~d~--~~v~~~~----~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 125 (244)
T d1pr9a_ 53 GIEPVCVDLGDW--EATERAL----GSVGPVDLLVNNAAVA-LLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125 (244)
T ss_dssp TCEEEECCTTCH--HHHHHHH----TTCCCCCEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCH--HHHHHHH----HHhCCceEEEeccccc-cccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh
Confidence 578899999998 8876665 4579999999999996 77899999999999999999999999999999987665
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
..+|+||++||..+.. + .+....|+++|+|+++|+|+++.|++++|||||+|+||+++|++...........+...+.
T Consensus 126 ~~~g~Ii~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~ 203 (244)
T d1pr9a_ 126 GVPGAIVNVSSQCSQR-A-VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR 203 (244)
T ss_dssp TCCEEEEEECCGGGTS-C-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTT
T ss_pred CCcceEeecccccccc-c-ccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhc
Confidence 4479999999999973 3 6889999999999999999999999999999999999999999887766665555666688
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQS 209 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~ 209 (219)
.|++|+++|+ |+|++++||+|+.++++|||+|.+|||++
T Consensus 204 ~pl~R~~~pe-evA~~v~fL~S~~a~~itG~~i~vDGG~~ 242 (244)
T d1pr9a_ 204 IPLGKFAEVE-HVVNAILFLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp CTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCCCCcCHH-HHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence 9999999998 99999999999999999999999999986
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-42 Score=273.42 Aligned_cols=198 Identities=20% Similarity=0.310 Sum_probs=175.4
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++..++||++|+ ++++++++++.+.+|++|++|||||.. ...++.+.+.++|++++++|+.++++++|+++|.|
T Consensus 64 ~~~~~~~~~~Dvs~~--~~v~~~~~~~~~~~G~iDiLVnnAg~~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m 140 (297)
T d1yxma1 64 KQARVIPIQCNIRNE--EEVNNLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSW 140 (297)
T ss_dssp CCCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred cCceEEEEeccCCCH--HHHHHHHHHHHHHhCCeEEEEeecccc-ccCchhhhhhhhhhhhhcccccchhhHHHHHHHhh
Confidence 467899999999999 999999999999999999999999985 77899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--hHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG--QERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~ 164 (219)
++++ +|+||++|+... .+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+|.|++...... .+...+
T Consensus 141 ~~~~-~g~Ii~~ss~~~--~~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 216 (297)
T d1yxma1 141 MKEH-GGSIVNIIVPTK--AG-FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE 216 (297)
T ss_dssp HHHH-CEEEEEECCCCT--TC-CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT
T ss_pred cccc-cccccccccccc--cc-ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHH
Confidence 9887 788998876433 22 68899999999999999999999999999999999999999998654332 122223
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
......|++|+++|+ |||++++||+|+.++++|||+|.||||++++.
T Consensus 217 ~~~~~~plgR~g~pe-dvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~ 263 (297)
T d1yxma1 217 GSFQKIPAKRIGVPE-EVSSVVCFLLSPAASFITGQSVDVDGGRSLYT 263 (297)
T ss_dssp TGGGGSTTSSCBCTH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHhCchhcCcCCcEEEeCcChhhhc
Confidence 334678999999998 99999999999999999999999999998864
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=2.9e-42 Score=266.57 Aligned_cols=198 Identities=20% Similarity=0.288 Sum_probs=175.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||+. ...++.+.+.++|++.+++|+.+++++++.+.|+|.
T Consensus 58 g~~~~~~~~Dv~~~--~~v~~~~~~~~~~~g~iDilVnnAg~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 134 (260)
T d1h5qa_ 58 GVKTKAYQCDVSNT--DIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWL 134 (260)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHSCSEEEEEECCCCC-CCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHhCCCcEeccccccc-ccCCHHHhccccccccccccccchhhhhhhhccccc
Confidence 56899999999999 999999999999999999999999985 778999999999999999999999999999999997
Q ss_pred hcCCCCeEEEeeccccccc-----CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 88 ESKAGGSIVFLTSIIGAER-----GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~-----~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+++.+++|+++++...... ...++...|+++|+|+.+|+|+++.|++++|||||+|+||+++|++..... +..
T Consensus 135 ~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~--~~~ 212 (260)
T d1h5qa_ 135 QKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD--KKI 212 (260)
T ss_dssp HHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC--HHH
T ss_pred ccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC--HHH
Confidence 7665788888888765421 113567899999999999999999999999999999999999999887642 233
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+......|++|+++|+ |+|++++||+|+.++++|||+|.+|||+.+.
T Consensus 213 ~~~~~~~~pl~R~g~pe-dvA~~v~fL~S~~s~~itG~~i~VDGG~~~~ 260 (260)
T d1h5qa_ 213 RDHQASNIPLNRFAQPE-EMTGQAILLLSDHATYMTGGEYFIDGGQLIW 260 (260)
T ss_dssp HHHHHHTCTTSSCBCGG-GGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred HHHHHhcCCCCCCcCHH-HHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence 44455889999999998 9999999999999999999999999999763
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3e-42 Score=267.02 Aligned_cols=198 Identities=24% Similarity=0.304 Sum_probs=160.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.++++++||++++ ++++++++++.+++|++|++|||||... ....+.+.+.++|++.+++|+.+++.++|.++|
T Consensus 56 ~~~~~~~~~Dvt~~--~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p 133 (264)
T d1spxa_ 56 EQNVNSVVADVTTD--AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVP 133 (264)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCceEEEEccCCCH--HHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCC
Confidence 45799999999999 9999999999999999999999999752 233566778999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch-----
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----- 159 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~----- 159 (219)
+|++++ |.+|+++|..+...+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......
T Consensus 134 ~m~~~~--g~iI~~~S~~~~~~~-~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~ 210 (264)
T d1spxa_ 134 HLSSTK--GEIVNISSIASGLHA-TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSK 210 (264)
T ss_dssp HHHHHT--CEEEEECCTTSSSSC-CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC------------
T ss_pred cccccc--Ccceeeeeecccccc-CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHH
Confidence 998764 677777776653233 688899999999999999999999999999999999999999987654221
Q ss_pred --HHHHHHHHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCcccc
Q 027744 160 --ERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 211 (219)
...........|++|+++|+ |+|++++||+|+ .++++|||++.+|||+++.
T Consensus 211 ~~~~~~~~~~~~~Pl~R~g~pe-dvA~~v~fL~S~~~s~~itG~~i~vDGG~slv 264 (264)
T d1spxa_ 211 KFYSTMATMKECVPAGVMGQPQ-DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI 264 (264)
T ss_dssp --HHHHHHHHHHCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHhCCcccCCccCceEEeCCChhhC
Confidence 12223344678999999998 999999999995 4889999999999999863
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=6.5e-43 Score=268.83 Aligned_cols=195 Identities=24% Similarity=0.243 Sum_probs=170.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+..+++||++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++|.++|+|+
T Consensus 51 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~iDilVnnAG~~-~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~ 127 (253)
T d1hxha_ 51 GERSMFVRHDVSSE--ADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMK 127 (253)
T ss_dssp CTTEEEECCCTTCH--HHHHHHHHHHHHHHCSCCEEEECCCCC-CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeecCCH--HHHHHHHHHHHHHhCCCCeEEeccccc-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 45788999999999 999999999999999999999999986 668899999999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC--CCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
++ +|+||++||..+.. + .+....|+++|+|+.+|+|+++.|+++ +|||||+|+||+++|++.....+.....+.
T Consensus 128 ~~--~G~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~ 203 (253)
T d1hxha_ 128 ET--GGSIINMASVSSWL-P-IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM 203 (253)
T ss_dssp TT--CEEEEEECCGGGTS-C-CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH
T ss_pred hc--CCceecccchhhhc-C-ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHH
Confidence 64 59999999999973 3 688999999999999999999999987 459999999999999987654433222222
Q ss_pred H---HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 166 V---REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 166 ~---~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
. ....|++|+.+|+ |+|++++||+|++++++|||++.+|||+.-
T Consensus 204 ~~~~~~~~~~gr~~~pe-dvA~~v~fL~S~~s~~itG~~i~VDGG~~~ 250 (253)
T d1hxha_ 204 VLHDPKLNRAGRAYMPE-RIAQLVLFLASDESSVMSGSELHADNSILG 250 (253)
T ss_dssp HBCBTTTBTTCCEECHH-HHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred HHhCccccccCCCCCHH-HHHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence 2 2345678888898 999999999999999999999999999864
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=3.7e-42 Score=267.68 Aligned_cols=201 Identities=18% Similarity=0.282 Sum_probs=171.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++..++||++|+ ++++++++++.+++|++|++|||||.... .....+.+.++|++.+++|+.+++.++|++.|+|
T Consensus 55 ~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m 132 (274)
T d1xhla_ 55 AEKINAVVADVTEA--SGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHL 132 (274)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcceEEEEeeCCCH--HHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccc
Confidence 35789999999999 99999999999999999999999997422 2344567889999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHH----H
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER----A 162 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----~ 162 (219)
++++ +|+|+++||.++. .+ .+++..|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......+. .
T Consensus 133 ~~~~-~g~ii~~ss~~~~-~~-~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~ 209 (274)
T d1xhla_ 133 IKTK-GEIVNVSSIVAGP-QA-HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKL 209 (274)
T ss_dssp HHTT-CEEEEECCGGGSS-SC-CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred cccc-cccccchhhhhcc-cc-CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHH
Confidence 9876 7888888888775 33 68889999999999999999999999999999999999999998665432221 1
Q ss_pred HHH---HHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCccccCCC
Q 027744 163 VKL---VREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 163 ~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
.+. .....|++|+++|+ |+|++++||+|+ .++++|||+|.+|||+++....
T Consensus 210 ~~~~~~~~~~iPlgR~g~pe-diA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g~ 264 (274)
T d1xhla_ 210 YSFIGSRKECIPVGHCGKPE-EIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGM 264 (274)
T ss_dssp HHHHHHCTTTCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGG
T ss_pred HHHHHHHHcCCCCCCCcCHH-HHHHHHHHHcCCccccCccCcEEEeCcCHHHhcCC
Confidence 111 22457999999998 999999999995 6899999999999999987543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=2.3e-41 Score=260.88 Aligned_cols=198 Identities=24% Similarity=0.382 Sum_probs=172.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh-CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL-GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
+.++++++||++++ ++++++++++.+++ +.+|++|||||.. ...++.+++.++|++++++|+.+++.+++++.|.|
T Consensus 54 ~~~~~~~~~D~s~~--~~~~~~~~~~~~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m 130 (258)
T d1ae1a_ 54 GLNVEGSVCDLLSR--TERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLL 130 (258)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTTSCCCEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCceEEEeecCCH--HHHHHHHHHHHHHhCCCcEEEecccccc-ccCccccCCHHHHhhhhhhcccccccccccccccc
Confidence 56788999999999 99999999999998 5799999999986 67899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERA 162 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~ 162 (219)
++++ .|+||++||.++. .+ .+.+..|+++|+|+++|+|.+++|++++|||||+|+||+++|++...... ....
T Consensus 131 ~~~~-~g~ii~isS~~~~-~~-~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~ 207 (258)
T d1ae1a_ 131 KASQ-NGNVIFLSSIAGF-SA-LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 207 (258)
T ss_dssp HHHT-SEEEEEECCGGGT-SC-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH
T ss_pred cccc-ccccccccccccc-cc-cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHH
Confidence 9887 8999999999997 33 68999999999999999999999999999999999999999998765432 2233
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
.+......|++|+++|+ |+|++++||+|+.++++||++|.+|||++...
T Consensus 208 ~~~~~~~~plgR~~~pe-diA~~v~fL~S~~s~~itG~~i~vDGG~s~~g 256 (258)
T d1ae1a_ 208 IDNFIVKTPMGRAGKPQ-EVSALIAFLCFPAASYITGQIIWADGGFTANG 256 (258)
T ss_dssp HHHHHHHSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred HHHHHhcCCCCCCcCHH-HHHHHHHHHhChhhCCCcCcEEEeCCCeeccC
Confidence 34444778999999998 99999999999999999999999999998653
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=9.2e-42 Score=265.28 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=166.2
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC----CCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP----LQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++.+++||++|+ ++++++++++.+++|++|++|||||.. ...++ .+.+.++|++++++|+.+++.++|+++
T Consensus 56 ~~~~~~~~~Dvs~~--~~v~~~~~~~~~~~g~iDilvnnAG~~-~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~ 132 (272)
T d1xkqa_ 56 EKQVNSVVADVTTE--DGQDQIINSTLKQFGKIDVLVNNAGAA-IPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVK 132 (272)
T ss_dssp GGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCceEEEEccCCCH--HHHHHHHHHHHHHhCCceEEEeCCccc-CcccccccchhccHHHHHHHHHhhhhHHHHHHHhhc
Confidence 45799999999999 999999999999999999999999986 33333 467788999999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecc-cccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 84 RRMKESKAGGSIVFLTSI-IGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~-~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
|+|++++ |.+|+++|. ++. .+ .+....|+++|+|+.+|+|+++.|++++|||||+|+||+|+|++.......+..
T Consensus 133 p~m~~~~--g~iI~~~Ss~a~~-~~-~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~ 208 (272)
T d1xkqa_ 133 PHLVASK--GEIVNVSSIVAGP-QA-QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQA 208 (272)
T ss_dssp HHHHHHT--CEEEEECCGGGSS-SC-CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHH
T ss_pred ccccccC--Cccccccchhccc-cC-CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHH
Confidence 9998764 556666554 454 33 688999999999999999999999999999999999999999987654332221
Q ss_pred -------HHHHHhhcCCCCCCCCchhHHHHHHHhccCC-CCcccceEEEecCCccccC
Q 027744 163 -------VKLVREAAPLHRWLDVKNDLASTVIYLISDG-SRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 163 -------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgG~~~~~ 212 (219)
........|++|+++|+ |+|++++||+|++ +.++|||++.+|||+++..
T Consensus 209 ~~~~~~~~~~~~~~~PlgR~g~pe-diA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~ 265 (272)
T d1xkqa_ 209 SQKFYNFMASHKECIPIGAAGKPE-HIANIILFLADRNLSFYILGQSIVADGGTSLVM 265 (272)
T ss_dssp HHHHHHHHHHCTTTCTTSSCBCHH-HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred HHHHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCcchhCCccCeEEEeCcCHHHhc
Confidence 12223557999999998 9999999999975 5789999999999999874
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=4.1e-42 Score=265.36 Aligned_cols=196 Identities=21% Similarity=0.279 Sum_probs=168.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.+..++++|++|+ ++++++++++.+++|++|++|||||... ...++.+.+.++|+..+++|+.+++.+++.+.|
T Consensus 57 ~~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 134 (256)
T d1ulua_ 57 LGGALLFRADVTQD--EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEP 134 (256)
T ss_dssp TTCCEEEECCTTCH--HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTT
T ss_pred cCcccccccccCCH--HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHH
Confidence 34678899999999 9999999999999999999999999753 234667888999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+|++ +|+||++||..+.. + .+....|+++|+|+++|+|+++.|++++|||||+|+||++.|++.......+...+
T Consensus 135 ~~~~---~G~Iv~isS~~~~~-~-~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~ 209 (256)
T d1ulua_ 135 LLRE---GGGIVTLTYYASEK-V-VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYD 209 (256)
T ss_dssp TEEE---EEEEEEEECGGGTS-B-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHH
T ss_pred Hhcc---CCEEEEEeehHhcC-C-CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHH
Confidence 8865 58999999999973 3 68899999999999999999999999999999999999999998877665555666
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+..|++|+++|+ |+|++++||+|+.++++|||+|.+|||+++.
T Consensus 210 ~~~~~~pl~R~~~pe-dvA~~v~fL~S~~s~~itG~~i~VDGG~~~~ 255 (256)
T d1ulua_ 210 RVAQTAPLRRNITQE-EVGNLGLFLLSPLASGITGEVVYVDAGYHIM 255 (256)
T ss_dssp HHHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHhcCCCCCCcCHH-HHHHHHHHHhCchhCCccCCeEEECcCEeCc
Confidence 666889999999998 9999999999999999999999999999875
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.1e-41 Score=257.73 Aligned_cols=186 Identities=24% Similarity=0.284 Sum_probs=166.3
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
..++.||+++. ++.+.+++|++|++|||||.. ...++.+++.++|++.+++|+.+++.++|.++|+|++++
T Consensus 46 ~~~~~~Dv~~~--------~~~~~~~~g~iD~lVnnAG~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~ 116 (234)
T d1o5ia_ 46 HRYVVCDLRKD--------LDLLFEKVKEVDILVLNAGGP-KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG 116 (234)
T ss_dssp SEEEECCTTTC--------HHHHHHHSCCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEcchHHH--------HHHHHHHhCCCcEEEeccccc-CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc
Confidence 35678999875 456677889999999999985 678899999999999999999999999999999999876
Q ss_pred CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhhc
Q 027744 91 AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAA 170 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~ 170 (219)
.|+||+++|..+... .+....|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......++.. +...+..
T Consensus 117 -~G~ii~i~S~~~~~~--~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~-~~~~~~~ 192 (234)
T d1o5ia_ 117 -WGRIVAITSFSVISP--IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQI 192 (234)
T ss_dssp -CEEEEEECCGGGTSC--CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTS
T ss_pred -ccccccccccccccc--ccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHH-HHHHhcC
Confidence 799999999988633 688999999999999999999999999999999999999999998776655444 3444789
Q ss_pred CCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 171 PLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 171 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
|++|+++|+ |+|++++||+|+.++++|||+|.+|||++.
T Consensus 193 pl~R~~~pe-diA~~v~fL~S~~s~~itG~~i~vDGG~s~ 231 (234)
T d1o5ia_ 193 PMRRMAKPE-EIASVVAFLCSEKASYLTGQTIVVDGGLSK 231 (234)
T ss_dssp TTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred CCCCCcCHH-HHHHHHHHHhChhhcCCcCcEEEECccccc
Confidence 999999998 999999999999999999999999999975
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=1.7e-41 Score=259.22 Aligned_cols=192 Identities=25% Similarity=0.370 Sum_probs=166.3
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++.++|.+.|+|+
T Consensus 50 ~~~~~~~~~Dls~~--~~i~~~~~~i~~~~g~iDiLinnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~ 126 (241)
T d2a4ka1 50 EAEAIAVVADVSDP--KAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLE 126 (241)
T ss_dssp CSSEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEEGGGGT-TTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCceEEEEecCCCH--HHHHHHHHHHHHHhCCccEeccccccc-cccchhhhhccccccccccccccccccccccccccc
Confidence 56889999999999 999999999999999999999999985 778999999999999999999999999999999886
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+ ++.|+++|+.+.. . .+++..|+++|+|+++|+|++++|++++|||||+|+||+++|++.... +++.... ..
T Consensus 127 ~---~~~i~~~ss~a~~-~--~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~-~~~~~~~-~~ 198 (241)
T d2a4ka1 127 E---GGSLVLTGSVAGL-G--AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPWAWEQ-EV 198 (241)
T ss_dssp T---TCEEEEECCCTTC-C--HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHHHHHH-HH
T ss_pred c---ccceeeccccccc-c--ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh-hHhHHHH-HH
Confidence 5 3566666665543 3 477899999999999999999999999999999999999999987653 3344443 44
Q ss_pred hhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 168 EAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 168 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+..|++|+++|+ |+|++++||+|+.++++||+++.+|||+++.
T Consensus 199 ~~~p~~r~~~p~-dva~~v~fL~S~~s~~itG~~i~vDGG~s~~ 241 (241)
T d2a4ka1 199 GASPLGRAGRPE-EVAQAALFLLSEESAYITGQALYVDGGRSIV 241 (241)
T ss_dssp HTSTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred hCCCCCCCcCHH-HHHHHHHHHhcchhCCCcCceEEeCCCcccC
Confidence 789999999998 9999999999999999999999999999863
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=4.7e-41 Score=259.68 Aligned_cols=193 Identities=24% Similarity=0.347 Sum_probs=173.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|.++|+|+
T Consensus 55 g~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~ 131 (259)
T d1ja9a_ 55 GAQGVAIQADISKP--SEVVALFDKAVSHFGGLDFVMSNSGME-VWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR 131 (259)
T ss_dssp TCCEEEEECCTTSH--HHHHHHHHHHHHHHSCEEEEECCCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE
T ss_pred CCCceEecCCCCCH--HHHHHHHHHHHHHcCCCcEEEeccccc-cccccccchHHHHHHHHhhccceeeeehhhhhhhhh
Confidence 56899999999999 999999999999999999999999985 778999999999999999999999999999999997
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-----------
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA----------- 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~----------- 156 (219)
+ ++++++++|..+...+ .+.+..|+++|+|+++|+|++++|++++|||||+|+||+++|++....
T Consensus 132 ~---~g~~iii~s~~~~~~~-~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~ 207 (259)
T d1ja9a_ 132 R---GGRIILTSSIAAVMTG-IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 207 (259)
T ss_dssp E---EEEEEEECCGGGTCCS-CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTT
T ss_pred c---CCcccccccccccccC-CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhccc
Confidence 5 4678888777765333 789999999999999999999999999999999999999999865432
Q ss_pred cchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 157 VGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+...+......|++|+++|+ |||++++||+|+.++++||+++.+|||+
T Consensus 208 ~~~~~~~~~~~~~~pl~R~g~p~-eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 208 MPQEKIDEGLANMNPLKRIGYPA-DIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp CCHHHHHHHHHHTSTTSSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCHHHHHHHHHhCCCCCCCcCHH-HHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 22345556666889999999998 9999999999999999999999999997
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=2.8e-40 Score=257.32 Aligned_cols=196 Identities=20% Similarity=0.249 Sum_probs=167.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCC----CCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQ----DPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
+.++..+++|++++ ++++++++++.+++|++|++|||||+..... ...+.+.++|++++++|+.++++++|.++
T Consensus 50 ~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (276)
T d1bdba_ 50 GDNVLGIVGDVRSL--EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACL 127 (276)
T ss_dssp GGGEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCeeEEecccccH--HHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHH
Confidence 46789999999999 9999999999999999999999999753322 22444556899999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-----
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----- 158 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----- 158 (219)
|+|+++ +|+||+++|..+... .+....|+++|+|+.+|+|+++.|+++. ||||+|+||+|+|++......
T Consensus 128 p~m~~~--~g~iI~i~S~~~~~~--~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~ 202 (276)
T d1bdba_ 128 PALVAS--RGNVIFTISNAGFYP--NGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSK 202 (276)
T ss_dssp HHHHHH--TCEEEEECCGGGTST--TSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC----
T ss_pred HHHHhc--CCCceeeeechhccC--CCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhh
Confidence 999876 489999999988733 6889999999999999999999999975 999999999999998654321
Q ss_pred ---hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccC-CCCcccceEEEecCCcccc
Q 027744 159 ---QERAVKLVREAAPLHRWLDVKNDLASTVIYLISD-GSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...+......|++|+++|+ |+|++++||+|+ .++++|||+|.||||+++.
T Consensus 203 ~~~~~~~~~~~~~~~PlgR~g~pe-eva~~v~fL~S~~~a~~itG~~i~VDGG~~~~ 258 (276)
T d1bdba_ 203 AISTVPLADMLKSVLPIGRMPEVE-EYTGAYVFFATRGDAAPATGALLNYDGGLGVR 258 (276)
T ss_dssp -----CHHHHHTTTCTTSSCCCGG-GGSHHHHHHHCHHHHTTCSSCEEEESSSGGGC
T ss_pred ccCcHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHcCCcccCCeeCcEEEECcChhhc
Confidence 222334455778999999999 999999999984 6899999999999999874
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=9.5e-40 Score=249.22 Aligned_cols=183 Identities=16% Similarity=0.241 Sum_probs=163.6
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.+++||++|+ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.++++++|.++|+|
T Consensus 55 ~g~~~~~~~~Dvt~~--~~v~~~~~~~~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 131 (240)
T d2bd0a1 55 EGALTDTITADISDM--ADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALM 131 (240)
T ss_dssp TTCEEEEEECCTTSH--HHHHHHHHHHHHHTSCCSEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEecCCCH--HHHHHHHHHHHHHcCCcceeecccccc-cCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHH
Confidence 367899999999999 999999999999999999999999986 78899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
++++ +|+||++||.++.. + .+++..|+++|+|+.+|+|+++.|++++|||+|+|+||+++|++.......
T Consensus 132 ~~~~-~G~Ii~isS~~~~~-~-~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~------- 201 (240)
T d2bd0a1 132 ERQH-SGHIFFITSVAATK-A-FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE------- 201 (240)
T ss_dssp HHHT-CEEEEEECCGGGTS-C-CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-------
T ss_pred HhcC-CCceEEEechhhcC-C-CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-------
Confidence 9876 79999999999973 3 688999999999999999999999999999999999999999998764322
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccce-EEEecCC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGT-TIYVDGA 207 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~-~i~~dgG 207 (219)
...++.+|+ |+|++++||+++..++++|+ ++..+||
T Consensus 202 ----~~~~~~~Pe-dvA~~v~~l~s~~~~~~~~~~~i~p~~G 238 (240)
T d2bd0a1 202 ----MQALMMMPE-DIAAPVVQAYLQPSRTVVEEIILRPTSG 238 (240)
T ss_dssp ----TGGGSBCHH-HHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred ----hHhcCCCHH-HHHHHHHHHHcCCccCccCCEEEEecCC
Confidence 113446776 99999999999988888886 4557776
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=5.2e-40 Score=255.54 Aligned_cols=196 Identities=23% Similarity=0.354 Sum_probs=173.4
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++++++||++|+ ++++++++++.+++|++|++|||+|.. ...++.+.+.++|++++++|+.+++.+++.+.|+|
T Consensus 66 ~g~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~idilV~nag~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m 142 (272)
T d1g0oa_ 66 NGSDAACVKANVGVV--EDIVRMFEEAVKIFGKLDIVCSNSGVV-SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL 142 (272)
T ss_dssp TTCCEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS
T ss_pred hCCceeeEeCCCCCH--HHHHHHHHHHHHHhCCCCccccccccc-hhhhhhhhhhhHHHHHhhhccceeeeecccccccc
Confidence 356899999999999 999999999999999999999999986 77899999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc---------
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV--------- 157 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~--------- 157 (219)
++ +|++++++|..+. ..+.+.+..|+++|+|+++|+|++++|++++|||||+|+||+++|++.....
T Consensus 143 ~~---~g~~i~i~s~~~~-~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~ 218 (272)
T d1g0oa_ 143 EI---GGRLILMGSITGQ-AKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGEN 218 (272)
T ss_dssp CT---TCEEEEECCGGGT-CSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTT
T ss_pred cc---ccccccccccccc-cccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccc
Confidence 76 5789999988876 3446788899999999999999999999999999999999999998754321
Q ss_pred -c-hHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 158 -G-QERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 158 -~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
. ++..........|++|+++|+ |||+++.||+|+.++++||++|.+|||+++
T Consensus 219 ~~~~~~~~~~~~~~~PlgR~~~pe-evA~~v~fL~s~~s~~itG~~i~vDGG~~m 272 (272)
T d1g0oa_ 219 LSNEEVDEYAAVQWSPLRRVGLPI-DIARVVCFLASNDGGWVTGKVIGIDGGACM 272 (272)
T ss_dssp CCHHHHHHHHHHHSCTTCSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred cchHHHHHHHHHccCCCCCCcCHH-HHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence 1 222223344778999999998 999999999999999999999999999875
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-40 Score=251.70 Aligned_cols=196 Identities=20% Similarity=0.324 Sum_probs=168.3
Q ss_pred CCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 5 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.....+....+|+.+. +. ++...+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++.++|.+.|
T Consensus 46 ~~~~~~~~~~~~d~~~~--~~----~~~~~~~~~~id~lVn~ag~~-~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 118 (245)
T d2ag5a1 46 LEKYPGIQTRVLDVTKK--KQ----IDQFANEVERLDVLFNVAGFV-HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118 (245)
T ss_dssp GGGSTTEEEEECCTTCH--HH----HHHHHHHCSCCSEEEECCCCC-CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHhccCCceeeeecccc--cc----ccccccccccceeEEeccccc-CCCChhhCCHHHHHHHHHHhhccchhHHHhhCc
Confidence 33345677888888776 44 445556678999999999986 678899999999999999999999999999999
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QE 160 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~ 160 (219)
+|.+++ .|+||+++|..+...+ .+.+.+|+++|+|+++|+|+++.|++++|||||+|+||+++|++...... .+
T Consensus 119 ~~~~~~-~g~Ii~isS~~~~~~~-~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~ 196 (245)
T d2ag5a1 119 KMLAQK-SGNIINMSSVASSVKG-VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE 196 (245)
T ss_dssp HHHHHT-CEEEEEECCSBTTTBC-CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH
T ss_pred ccccCC-CceeeeeechhhccCC-ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhH
Confidence 999887 7999999998875333 68889999999999999999999999999999999999999998664322 23
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
..........|++|+++|+ |+|+.+.||+|+.++++|||++.||||+++
T Consensus 197 ~~~~~~~~~~pl~R~~~pe-dva~~v~fL~s~~s~~iTG~~i~VDGG~sl 245 (245)
T d2ag5a1 197 EARNDFLKRQKTGRFATAE-EIAMLCVYLASDESAYVTGNPVIIDGGWSL 245 (245)
T ss_dssp HHHHHHHHTCTTSSCEEHH-HHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHHHHHHhcCCCCCCcCHH-HHHHHHHHHhChhhCCCcCceEEeCCCcCC
Confidence 3344445789999999998 999999999999999999999999999985
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-40 Score=254.24 Aligned_cols=190 Identities=19% Similarity=0.240 Sum_probs=164.2
Q ss_pred CCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 6 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
.++.++.+++||++|+ ++++++++++.+++|++|++|||||.. . .++|++++++|+.+++.+++.++|+
T Consensus 51 ~~~~~~~~~~~Dv~~~--~~v~~~~~~~~~~~G~iDilVnnAg~~-~--------~~~~~~~~~~n~~~~~~~~~~~~~~ 119 (254)
T d2gdza1 51 FEPQKTLFIQCDVADQ--QQLRDTFRKVVDHFGRLDILVNNAGVN-N--------EKNWEKTLQINLVSVISGTYLGLDY 119 (254)
T ss_dssp SCGGGEEEEECCTTSH--HHHHHHHHHHHHHHSCCCEEEECCCCC-C--------SSSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEeecCCH--HHHHHHHHHHHHHcCCcCeeccccccc-c--------cccchheeeeehhhHHHHHHHHHHH
Confidence 4567899999999999 999999999999999999999999985 2 2458999999999999999999999
Q ss_pred HHhcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHH--HHHHhCCCCeEEEEeecCCccCCCCccccchHH
Q 027744 86 MKESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRT--AAMEIGKHKIRVNGIARGLHLQDEYPIAVGQER 161 (219)
Q Consensus 86 l~~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~--l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~ 161 (219)
|.+++ .+|+||++||..+..+ .+...+|+++|+|+.+|+|+ ++.|++++|||||+|+||+|+|++.......+.
T Consensus 120 m~~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~ 197 (254)
T d2gdza1 120 MSKQNGGEGGIIINMSSLAGLMP--VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEEN 197 (254)
T ss_dssp HCGGGTCCCEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHH
T ss_pred HHHhhcCCCcEEEeeccHhhccC--CCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccc
Confidence 98764 2488999999999733 68899999999999999997 788999999999999999999998765543321
Q ss_pred ------HHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 162 ------AVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 162 ------~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..+......|++|+++|+ |+|++++||+|+. ++||+++.||||+++.
T Consensus 198 ~~~~~~~~~~~~~~~p~~r~~~pe-dvA~~v~fL~s~~--~itG~~i~VdGG~~~~ 250 (254)
T d2gdza1 198 MGQYIEYKDHIKDMIKYYGILDPP-LIANGLITLIEDD--ALNGAIMKITTSKGIH 250 (254)
T ss_dssp HGGGGGGHHHHHHHHHHHCCBCHH-HHHHHHHHHHHCT--TCSSCEEEEETTTEEE
T ss_pred ccccHHHHHHHHhcCCCCCCcCHH-HHHHHHHHHHcCC--CCCCCEEEECCCCeee
Confidence 223344667889999998 9999999999864 5999999999999765
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.2e-39 Score=252.56 Aligned_cols=182 Identities=17% Similarity=0.171 Sum_probs=160.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
+...+.+|+++. ++++++++++.+++|++|+||||||+. ...++.+++.++|++++++|+.++++++|.++|+|+++
T Consensus 63 ~~~~~~~d~~~~--~~~~~~v~~~~~~~G~iDiLVnNAGi~-~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 139 (302)
T d1gz6a_ 63 RGGKAVANYDSV--EAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ 139 (302)
T ss_dssp TTCEEEEECCCG--GGHHHHHHHHHHHTSCCCEEEECCCCC-CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchH--HHHHHHHHHHHHHcCCCCEEEECCccC-CCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC
Confidence 345678999999 999999999999999999999999996 67899999999999999999999999999999999988
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHHhh
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREA 169 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~ 169 (219)
+ +|+||++||..+... .++...|+++|+|+.+|+++++.|++++|||||+|+||++.|++.... ++ ..
T Consensus 140 ~-~G~IV~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~-~~-~~------- 207 (302)
T d1gz6a_ 140 N-YGRIIMTASASGIYG--NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM-PE-DL------- 207 (302)
T ss_dssp T-CEEEEEECCHHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS-CH-HH-------
T ss_pred C-CcEEEEeCChhhcCC--CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC-cH-hh-------
Confidence 7 799999999999743 688999999999999999999999999999999999999987765432 22 11
Q ss_pred cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 170 APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 170 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...|+ |+|++++||+|+.+ ++||+++.+|||+.-.
T Consensus 208 ---~~~~~Pe-dvA~~v~fL~S~~a-~itG~~i~vdGG~~~~ 244 (302)
T d1gz6a_ 208 ---VEALKPE-YVAPLVLWLCHESC-EENGGLFEVGAGWIGK 244 (302)
T ss_dssp ---HHHSCGG-GTHHHHHHHTSTTC-CCCSCEEEEETTEEEE
T ss_pred ---HhcCCHH-HHHHHHHHHcCCCc-CCCCcEEEeCCCceeE
Confidence 1224566 99999999999765 7999999999998543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-38 Score=242.31 Aligned_cols=195 Identities=15% Similarity=0.138 Sum_probs=166.0
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++++++||++++ ++++++++++.+++|++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|
T Consensus 59 ~~~~~~~~~~Dls~~--~~v~~~v~~~~~~~g~iD~lVnnAg~~-~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~ 135 (257)
T d1xg5a_ 59 YPGTLIPYRCDLSNE--EDILSMFSAIRSQHSGVDICINNAGLA-RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSM 135 (257)
T ss_dssp CSSEEEEEECCTTCH--HHHHHHHHHHHHHHCCCSEEEECCCCC-CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCceEEEEEccCCCH--HHHHHHHHHHHHhcCCCCEEEeccccc-CCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHH
Confidence 346899999999999 999999999999999999999999986 77899999999999999999999999999999999
Q ss_pred HhcC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHh--CCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 87 KESK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEI--GKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 87 ~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
++.+ .+|+||++||.++....+.+....|+++|+|+.+|+|++++|+ +++|||+|+|+||.+.|++....... ..
T Consensus 136 ~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~-~~- 213 (257)
T d1xg5a_ 136 KERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-DP- 213 (257)
T ss_dssp HHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-CH-
T ss_pred HHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh-hH-
Confidence 8754 3689999999998633334566779999999999999999998 78899999999999999987654332 22
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
+......|++++.+|+ |+|++++||+|+.++++|||++.-++|
T Consensus 214 ~~~~~~~~~~r~~~pe-dvA~~v~fL~s~~a~~itG~i~i~~~g 256 (257)
T d1xg5a_ 214 EKAAATYEQMKCLKPE-DVAEAVIYVLSTPAHIQIGDIQMRPTG 256 (257)
T ss_dssp HHHHHHHC---CBCHH-HHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred HHHHhcCCCCCCcCHH-HHHHHHHHHhCChhcCeECCEEEEeCC
Confidence 2233667899999998 999999999999999999997555544
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.6e-38 Score=251.19 Aligned_cols=190 Identities=24% Similarity=0.289 Sum_probs=163.3
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCC-CCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGK-MQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
.+|+++. ++++.+++++.+++|++|++|||||.... .+++.+++.++|++.+++|+.+++.++|+++|+|++ +|
T Consensus 91 ~~d~~~~--~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~---~G 165 (329)
T d1uh5a_ 91 RYNMLQN--YTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP---QS 165 (329)
T ss_dssp HHHTCCC--CSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EE
T ss_pred hhhhhhH--HHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc---cc
Confidence 3477788 89999999999999999999999997533 357889999999999999999999999999999964 58
Q ss_pred eEEEeecccccccCCCCC-cchhHHhHHHHHHHHHHHHHHhCC-CCeEEEEeecCCccCCCCcc----------------
Q 027744 94 SIVFLTSIIGAERGLYPG-AAAYGACAASIHQLVRTAAMEIGK-HKIRVNGIARGLHLQDEYPI---------------- 155 (219)
Q Consensus 94 ~iv~iss~~~~~~~~~~~-~~~y~~sK~a~~~l~~~l~~e~~~-~gi~v~~i~pG~v~t~~~~~---------------- 155 (219)
+||++||..+.. + .++ ...|+++|+|+++|+|+++.|+++ +|||||+|+||+|+|+....
T Consensus 166 sIv~iss~~~~~-~-~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~ 243 (329)
T d1uh5a_ 166 SIISLTYHASQK-V-VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNK 243 (329)
T ss_dssp EEEEEECGGGTS-C-CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------------
T ss_pred ccccceeehhcc-c-ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhh
Confidence 999999988863 3 454 568999999999999999999986 69999999999999953221
Q ss_pred ---------------------------ccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 156 ---------------------------AVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 156 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
....+...+......|++|+++|+ |||.+++||+|+.++++|||+|.||||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pe-dvA~~v~fLaSd~s~~iTGq~i~VDGG~ 322 (329)
T d1uh5a_ 244 NRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST-DIGSVASFLLSRESRAITGQTIYVDNGL 322 (329)
T ss_dssp ----------------------------CHHHHHHHHHHHHSSSCSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHH-HHHHHHHHHhCchhCCccCCeEEECCCc
Confidence 112344555666888999999998 9999999999999999999999999999
Q ss_pred cccC
Q 027744 209 SITR 212 (219)
Q Consensus 209 ~~~~ 212 (219)
++..
T Consensus 323 ~~~g 326 (329)
T d1uh5a_ 323 NIMF 326 (329)
T ss_dssp GGCS
T ss_pred cccc
Confidence 8874
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=3.5e-37 Score=242.13 Aligned_cols=199 Identities=17% Similarity=0.254 Sum_probs=171.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.+++||++++ ++++.+++.+.++++++|++|||||.. ...++...+.++|+..+.+|..+.+.+.+.+.+.+.
T Consensus 74 g~~~~~~~~D~~~~--~~v~~~~~~~~~~~g~iDilvnnAg~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 150 (294)
T d1w6ua_ 74 GNKVHAIQCDVRDP--DMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLI 150 (294)
T ss_dssp SSCEEEEECCTTCH--HHHHHHHHHHHHHTCSCSEEEECCCCC-CCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecccCh--HHHHHHhhhhhhhccccchhhhhhhhc-cccccccchhhhhhhheeeecccchhhhhhhhcccc
Confidence 56788999999999 999999999999999999999999985 778889999999999999999999999999888887
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc-hHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-QERAVKLV 166 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~ 166 (219)
....++.+++++|..+... .++...|+++|+|+++|+|.++.|++++|||||+|+||+|+|++...... .+...+..
T Consensus 151 ~~~~~~~i~~~ss~~~~~~--~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~ 228 (294)
T d1w6ua_ 151 KAQKGAAFLSITTIYAETG--SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM 228 (294)
T ss_dssp HTTCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred cccccccccccccchhhhc--ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHH
Confidence 7665678888888877633 57889999999999999999999999999999999999999998765432 33334445
Q ss_pred HhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 167 REAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 167 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
....|++|+++|+ |+|+++.||+|+.++++||++|.+|||+++..
T Consensus 229 ~~~~pl~R~~~pe-diA~~v~fL~sd~s~~itG~~i~vDGG~~l~~ 273 (294)
T d1w6ua_ 229 IGRIPCGRLGTVE-ELANLAAFLCSDYASWINGAVIKFDGGEEVLI 273 (294)
T ss_dssp HTTCTTSSCBCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred hhcCCCCCCCCHH-HHHHHHHHHhCchhcCCCCcEEEECCChhhee
Confidence 5788999999998 99999999999999999999999999987653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=4.3e-36 Score=234.71 Aligned_cols=193 Identities=26% Similarity=0.339 Sum_probs=153.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHH--------------HHHHhhhchH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFK--------------KLVKINFVAP 75 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~ 75 (219)
.+..+.+|+++. ++++++++++.+++|++|+||||||.. ...++.+.+.++|+ .++.+|+.++
T Consensus 71 ~~~~~~~dv~~~--~~v~~~~~~~~~~~G~iDiLVnnAG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 147 (284)
T d1e7wa_ 71 SGADGSAPVTLF--TRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAP 147 (284)
T ss_dssp C----CCCBCHH--HHHHHHHHHHHHHHSCCCEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHTHHH
T ss_pred ccccccccCCCH--HHHHHHHHHHHHHhCCCCEEEecCCcc-CCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeee
Confidence 445567789999 999999999999999999999999986 55677766665554 4789999999
Q ss_pred HHHHHHHHHHHHh-----cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccC
Q 027744 76 WFLLKAVGRRMKE-----SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 150 (219)
Q Consensus 76 ~~l~~~~~~~l~~-----~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t 150 (219)
+++.+.+.+.+.. +...++|++++|.....+ .+++..|+++|+|+.+|+|++++|++++|||+|+|+||++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~--~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~ 225 (284)
T d1e7wa_ 148 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225 (284)
T ss_dssp HHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred eeeeccccchhhhhHHHhcCCCCcccccccccccCC--ccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence 9999999987643 222578999988887533 688899999999999999999999999999999999998654
Q ss_pred CCCccccchHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 151 DEYPIAVGQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
... ...+.. +......|+ +|+++|+ |+|++++||+|+.++++|||+|.+|||+++++
T Consensus 226 ~~~---~~~~~~-~~~~~~~pl~~R~~~pe-eiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r 283 (284)
T d1e7wa_ 226 VDD---MPPAVW-EGHRSKVPLYQRDSSAA-EVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 283 (284)
T ss_dssp GGG---SCHHHH-HHHHTTCTTTTSCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred ccc---CCHHHH-HHHHhcCCCCCCCCCHH-HHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence 322 223333 334466775 8999998 99999999999999999999999999999876
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=2.1e-35 Score=232.24 Aligned_cols=188 Identities=22% Similarity=0.244 Sum_probs=163.3
Q ss_pred CccchhHHHHHHHHHHHHhCCCcEEEeccccCC-CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEE
Q 027744 19 EEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVF 97 (219)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~ 97 (219)
++. .+++++++++.+++|++|++|||||... ...++.+.+.++|++++++|+.+++.+++++++.|.+ +|.+++
T Consensus 101 ~~~--~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~g~~~~ 175 (297)
T d1d7oa_ 101 SSN--WTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP---GGASIS 175 (297)
T ss_dssp CCC--CSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred ccH--HHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc---CCccee
Confidence 555 6789999999999999999999999753 2467889999999999999999999999999988765 466777
Q ss_pred eecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC-CCCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCC
Q 027744 98 LTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG-KHKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWL 176 (219)
Q Consensus 98 iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~-~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (219)
+++.... ....+....|+++|+++.++++.++.+++ ++|||||+|+||++.|++.......+...+......|++|++
T Consensus 176 ~~~~~~~-~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~ 254 (297)
T d1d7oa_ 176 LTYIASE-RIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTL 254 (297)
T ss_dssp EECGGGT-SCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCB
T ss_pred eeehhhc-ccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCC
Confidence 7776655 33357778999999999999999999996 689999999999999999887655566666666889999999
Q ss_pred CCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 177 DVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 177 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
+|+ |||++++||+|+.++++|||+|.+|||++....
T Consensus 255 ~pe-evA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~ 290 (297)
T d1d7oa_ 255 TAD-EVGNAAAFLVSPLASAITGATIYVDNGLNSMGV 290 (297)
T ss_dssp CHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSS
T ss_pred CHH-HHHHHHHHHhCchhcCCcCceEEECcCHhhcCC
Confidence 998 999999999999999999999999999988753
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.4e-35 Score=224.40 Aligned_cols=198 Identities=22% Similarity=0.256 Sum_probs=172.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC----CCCCCcCHHHHHHHHHhhhchHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM----QDPLQVGEDEFKKLVKINFVAPWFLLKAVG 83 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 83 (219)
.++...+.+|+++. .++...++++.+.++++|++|||++..... ........+.|...+.+|+.+.+.+.+.+.
T Consensus 54 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (258)
T d1qsga_ 54 LGSDIVLQCDVAED--ASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACR 131 (258)
T ss_dssp TTCCCEEECCTTCH--HHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred cCCcceeecccchH--HHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677889999999 999999999999999999999999875221 122346667899999999999999999999
Q ss_pred HHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHH
Q 027744 84 RRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAV 163 (219)
Q Consensus 84 ~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~ 163 (219)
+.|.+ ++.|+++||..+..+ .+.+..|+++|+|+++|+|++++|++++|||||+|+||+|.|++.......+...
T Consensus 132 ~~~~~---~~~Ii~iss~~~~~~--~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~ 206 (258)
T d1qsga_ 132 SMLNP---GSALLTLSYLGAERA--IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKML 206 (258)
T ss_dssp GGEEE---EEEEEEEECGGGTSB--CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHH
T ss_pred HhccC---CcEEEEecchhhccC--CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHH
Confidence 98864 567999999888633 6788999999999999999999999999999999999999999988766666666
Q ss_pred HHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCC
Q 027744 164 KLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRP 213 (219)
Q Consensus 164 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~ 213 (219)
+...+..|++|+++|+ |+|+++.||+|+.++++||+++.+|||+++...
T Consensus 207 ~~~~~~~pl~R~~~pe-eia~~v~fL~s~~s~~itG~~i~vDGG~~i~g~ 255 (258)
T d1qsga_ 207 AHCEAVTPIRRTVTIE-DVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAM 255 (258)
T ss_dssp HHHHHHSTTSSCCCHH-HHHHHHHHHTSGGGTTCCSCEEEESTTGGGBCS
T ss_pred HHHHhCCCCCCCcCHH-HHHHHHHHHhCchhcCccCceEEECcCHHHhcC
Confidence 6666889999999998 999999999999999999999999999998754
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.1e-35 Score=225.28 Aligned_cols=190 Identities=14% Similarity=0.116 Sum_probs=161.3
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHH----hCCCcEEEeccccCC--CCCCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQI----LGNLDAFVHCYTYEG--KMQDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~----~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
++.++++++||++++ ++++++++.+.+. ++.+|++|||||... +..++.+.++++|++++++|+.++++++|
T Consensus 58 ~~~~~~~~~~Dvs~~--~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 135 (259)
T d1oaaa_ 58 PDLKVVLAAADLGTE--AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS 135 (259)
T ss_dssp TTSEEEEEECCTTSH--HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCceEEEEEccCCCH--HHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHH
Confidence 466899999999999 9999999998773 357899999999753 34567889999999999999999999999
Q ss_pred HHHHHHHhcC-CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc--
Q 027744 81 AVGRRMKESK-AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV-- 157 (219)
Q Consensus 81 ~~~~~l~~~~-~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~-- 157 (219)
.++|+|++++ ..|+||++||..+..+ .+++..|+++|+|+.+|+|+++.| .+|||||+|+||+|.|++.....
T Consensus 136 ~~~~~m~~~~~~~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~ 211 (259)
T d1oaaa_ 136 GTLNAFQDSPGLSKTVVNISSLCALQP--YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARET 211 (259)
T ss_dssp HHHHTSCCCTTCEEEEEEECCGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccccccccccccCC--CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhc
Confidence 9999998764 2479999999999733 688999999999999999999999 57999999999999999865432
Q ss_pred -chHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 158 -GQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
..+...+.+....+++++.+|+ |+|+.+++|+++ ++++||++|++
T Consensus 212 ~~~~~~~~~~~~~~~~~r~~~p~-evA~~i~~ll~~-~s~~TG~~idv 257 (259)
T d1oaaa_ 212 SKDPELRSKLQKLKSDGALVDCG-TSAQKLLGLLQK-DTFQSGAHVDF 257 (259)
T ss_dssp CSCHHHHHHHHHHHHTTCSBCHH-HHHHHHHHHHHH-CCSCTTEEEET
T ss_pred CCCHHHHHHHHhcCCCCCCCCHH-HHHHHHHHHhhh-ccCCCCCeEEe
Confidence 2233444444667889989998 999999999986 57999999876
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=8.4e-36 Score=229.05 Aligned_cols=189 Identities=13% Similarity=0.090 Sum_probs=153.4
Q ss_pred CCCcceEEEEecCC-ccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 6 KGGQPVEVVGLDME-EDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 6 ~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.++.++.++.+|++ +. ++++++++++.+++|++|+||||||.. +.++|++++++|+.+++++++.++|
T Consensus 52 ~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~ 120 (254)
T d1sbya1 52 NPKVNITFHTYDVTVPV--AESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILD 120 (254)
T ss_dssp CTTSEEEEEECCTTSCH--HHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCCH--HHHHHHHHHHHHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 45678999999998 45 689999999999999999999999964 4577999999999999999999999
Q ss_pred HHHhcC--CCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH
Q 027744 85 RMKESK--AGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA 162 (219)
Q Consensus 85 ~l~~~~--~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~ 162 (219)
+|.+++ .+|+||++||..+..+ .+++..|+++|+|+.+|+++++.|++++|||||+|+||+|+|++.+........
T Consensus 121 ~m~~~~~~~~g~Ii~isS~~~~~~--~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~ 198 (254)
T d1sbya1 121 FWDKRKGGPGGIIANICSVTGFNA--IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV 198 (254)
T ss_dssp HHCGGGTCCCEEEEEECCGGGTSC--CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS
T ss_pred HhhhcccCCCceEEEEechhhccC--CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhH
Confidence 997753 3589999999999733 688999999999999999999999999999999999999999976543322222
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+.. ...++++...++|++|+.++++.+. ..||+++.+|||+.-.
T Consensus 199 ~~~~-~~~~~~~~~~~~e~va~~~~~~~~~---~~tG~vi~vdgG~l~~ 243 (254)
T d1sbya1 199 EPRV-AELLLSHPTQTSEQCGQNFVKAIEA---NKNGAIWKLDLGTLEA 243 (254)
T ss_dssp CTTH-HHHHTTSCCEEHHHHHHHHHHHHHH---CCTTCEEEEETTEEEE
T ss_pred HHHH-HhccccCCCCCHHHHHHHHHHhhhC---CCCCCEEEECCCEeCc
Confidence 2222 2233344344455999998888753 3699999999997433
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-34 Score=222.13 Aligned_cols=185 Identities=17% Similarity=0.201 Sum_probs=149.6
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.+++.+.||++|. ++++++++++.+ |++|++|||||.. ...++.+.+.++|++++++|+.|+++++++++|+|
T Consensus 55 ~~~~~~~~~~Dv~~~--~~~~~~~~~~~~--g~idilvnnag~~-~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m 129 (285)
T d1jtva_ 55 PPGSLETLQLDVRDS--KSVAAARERVTE--GRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDM 129 (285)
T ss_dssp CTTSEEEEECCTTCH--HHHHHHHHTCTT--SCCSEEEECCCCC-CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCceEEEeccccch--Hhhhhhhhhccc--cchhhhhhccccc-ccccccchhHhhhhhhhhcchhHHHHHHHHHHHHH
Confidence 467899999999999 999999988743 8899999999985 77889999999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH------
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE------ 160 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~------ 160 (219)
++++ +|+||++||.++..+ .+....|+++|+|+.+|+++++.|++++|||||+|+||+|+|++........
T Consensus 130 ~~~~-~G~Iv~isS~~g~~~--~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~ 206 (285)
T d1jtva_ 130 KRRG-SGRVLVTGSVGGLMG--LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDR 206 (285)
T ss_dssp HHHT-CEEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHT
T ss_pred HHcC-CCceEEEechhhcCC--CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhc
Confidence 9876 799999999999743 6889999999999999999999999999999999999999999876543211
Q ss_pred ----HHHHHH-----HhhcCCCCCCCCchhHHHHHHHhccCCC---Ccccce
Q 027744 161 ----RAVKLV-----REAAPLHRWLDVKNDLASTVIYLISDGS---RYMTGT 200 (219)
Q Consensus 161 ----~~~~~~-----~~~~~~~~~~~~~~dva~~~~~l~s~~~---~~~~G~ 200 (219)
...... ....+.++..+|+ |||++++++++... ++++|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pe-eVA~~v~~~~~~~~p~~ry~~g~ 257 (285)
T d1jtva_ 207 TDIHTFHRFYQYLAHSKQVFREAAQNPE-EVAEVFLTALRAPKPTLRYFTTE 257 (285)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCBCHH-HHHHHHHHHHHCSSCCSEEESCS
T ss_pred cchhHHHHHHHHHHHHhhhhcccCCCHH-HHHHHHHHHHhCCCCCeEEecHH
Confidence 111111 1223445567787 99999999996543 455554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=1.2e-32 Score=214.04 Aligned_cols=199 Identities=21% Similarity=0.280 Sum_probs=154.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCC---CCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKM---QDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+....++++|++++ +++.++++++.+.+|++|++|||+|..... .......+..+...+.++..+...+.+...
T Consensus 54 ~~~~~~~~~d~~~~--~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 130 (274)
T d2pd4a1 54 LNSPYVYELDVSKE--EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK- 130 (274)
T ss_dssp TTCCCEEECCTTCH--HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG-
T ss_pred CCceeEeeecccch--hhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccc-
Confidence 44667899999999 999999999999999999999999975332 222233334444444444433333333333
Q ss_pred HHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 85 RMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 85 ~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
...+.++.|+++++.... . +.+....|+++|+|+.+|+|++++|++++|||+|+|+||++.|++.......+....
T Consensus 131 --~~~~~~~~i~~~s~~~~~-~-~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~ 206 (274)
T d2pd4a1 131 --PLLNNGASVLTLSYLGST-K-YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILK 206 (274)
T ss_dssp --GGEEEEEEEEEEECGGGT-S-BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHH
T ss_pred --cccccCcceeeecccccc-c-ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHH
Confidence 322213445555555543 3 367888999999999999999999999999999999999999999888776666666
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccccCCC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITRPR 214 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~~~ 214 (219)
......|++|+++|+ |+|+.++||+|+.+.++|||+|.+|||+++....
T Consensus 207 ~~~~~~p~~r~~~pe-dIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g~~ 255 (274)
T d2pd4a1 207 WNEINAPLRKNVSLE-EVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMG 255 (274)
T ss_dssp HHHHHSTTSSCCCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSC
T ss_pred HHhhhhhccCCcCHH-HHHHHHHHHhChhhCCCcCceEEECCChhhccCC
Confidence 666889999999998 9999999999999999999999999999987543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=3.9e-32 Score=208.13 Aligned_cols=181 Identities=18% Similarity=0.229 Sum_probs=147.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHH--HhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQ--ILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
+.++++++||++|+ ++++++++++.+ .++++|++|||||+.....++.+.+.++|++++++|+.+++.+++.++|+
T Consensus 52 ~~~~~~~~~Dvs~~--~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~ 129 (248)
T d1snya_ 52 HSNIHILEIDLRNF--DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL 129 (248)
T ss_dssp CTTEEEEECCTTCG--GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEeccH--HHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHH
Confidence 46899999999999 999999999854 57899999999998756667888999999999999999999999999999
Q ss_pred HHhcC----------CCCeEEEeecccccccC-CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCc
Q 027744 86 MKESK----------AGGSIVFLTSIIGAERG-LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYP 154 (219)
Q Consensus 86 l~~~~----------~~g~iv~iss~~~~~~~-~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~ 154 (219)
|+++. ..|++|+++|..+...+ +.+++.+|++||+|+.+|+++++.|++++||++++|+||+|+|++..
T Consensus 130 l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~ 209 (248)
T d1snya_ 130 LKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG 209 (248)
T ss_dssp HHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred HHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence 98641 25899999999876332 24567899999999999999999999999999999999999999976
Q ss_pred cccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 155 IAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
...+. +++ +.++.++.++.......+|+++.+||+.
T Consensus 210 ~~~~~-----------------~~~-~~~~~i~~~i~~l~~~~tG~~i~~dG~~ 245 (248)
T d1snya_ 210 SSAPL-----------------DVP-TSTGQIVQTISKLGEKQNGGFVNYDGTP 245 (248)
T ss_dssp TTCSB-----------------CHH-HHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred ccCCC-----------------Cch-HHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence 53221 222 3333343433333445689999999864
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-33 Score=211.85 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=145.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++.||++|+ ++++.+++++.+++|++|++|||||.. ...++.+.+.++|++++++|+.+++++++.++|+|+
T Consensus 55 ~~~~~~~~~Dvs~~--~~v~~~~~~i~~~~g~idilinnag~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 131 (244)
T d1yb1a_ 55 GAKVHTFVVDCSNR--EDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT 131 (244)
T ss_dssp TCCEEEEECCTTCH--HHHHHHHHHHHHHTCCCSEEEECCCCC-CCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHHcCCCceeEeecccc-ccccccccchhHHHhhcceeeeccHHHHHHHhhhHH
Confidence 56899999999999 999999999999999999999999996 678888999999999999999999999999999999
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC---CCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK---HKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
+++ .|+||++||..+..+ .++++.|+++|+|+.+|+++|+.|+++ +||+|++|+||+|+|++.....
T Consensus 132 ~~~-~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------- 201 (244)
T d1yb1a_ 132 KNN-HGHIVTVASAAGHVS--VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------- 201 (244)
T ss_dssp HTT-CEEEEEECCCC-CCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH-------
T ss_pred hcC-CceEEEeecchhcCC--CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC-------
Confidence 887 799999999999733 688999999999999999999999875 6899999999999999876421
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccC
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~ 192 (219)
.+..+..+|+ ++|+.+...+..
T Consensus 202 -----~~~~~~~~pe-~va~~i~~~~~~ 223 (244)
T d1yb1a_ 202 -----TSLGPTLEPE-EVVNRLMHGILT 223 (244)
T ss_dssp -----HHHCCCCCHH-HHHHHHHHHHHT
T ss_pred -----ccccCCCCHH-HHHHHHHHHHhc
Confidence 1223445666 999999886643
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-32 Score=207.41 Aligned_cols=188 Identities=20% Similarity=0.297 Sum_probs=155.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC-----CCCCCCCcCHHHHHHHHHhhhchHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG-----KMQDPLQVGEDEFKKLVKINFVAPWFLLKAV 82 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 82 (219)
+.+.....+|+.+. +.++....++...++.+|.+++|++... ...++.+.+.++|++++++|+.+++++++++
T Consensus 50 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~ 127 (248)
T d2o23a1 50 GNNCVFAPADVTSE--KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLV 127 (248)
T ss_dssp CTTEEEEECCTTCH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCccccccccccc--ccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHh
Confidence 35678899999999 9999999999999999999999987542 2345677889999999999999999999999
Q ss_pred HHHHHhc-----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 83 GRRMKES-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 83 ~~~l~~~-----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
.|+|... .++|+||++||..+..+ .+++..|+++|+|+++|+|++++|++++|||+|+|+||++.|++.....
T Consensus 128 ~~~~~~~~~~~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~ 205 (248)
T d2o23a1 128 AGEMGQNEPDQGGQRGVIINTASVAAFEG--QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP 205 (248)
T ss_dssp HHHHTTSCCCTTSCCEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------
T ss_pred HHHHHHhhhhccCCceEEEEecchhhccC--CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC
Confidence 9998754 22689999999999743 6889999999999999999999999999999999999999999877643
Q ss_pred chHHHHHHHHhhcCC-CCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 158 GQERAVKLVREAAPL-HRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
. + ..+......|+ +|+++|+ |||++++||++ ++++|||+|.|
T Consensus 206 ~-~-~~~~~~~~~pl~~R~g~pe-evA~~v~fL~s--~~~itGq~I~v 248 (248)
T d2o23a1 206 E-K-VCNFLASQVPFPSRLGDPA-EYAHLVQAIIE--NPFLNGEVIRL 248 (248)
T ss_dssp ------CHHHHTCSSSCSCBCHH-HHHHHHHHHHH--CTTCCSCEEEE
T ss_pred H-H-HHHHHHhcCCCCCCCcCHH-HHHHHHHHHHh--CCCCCceEeEC
Confidence 2 2 22333366776 8899998 99999999996 57999999986
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.98 E-value=5e-32 Score=206.64 Aligned_cols=194 Identities=23% Similarity=0.271 Sum_probs=157.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCC---CCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEG---KMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+.+...+++|+++. .....+.....+... .+.++++++... ........+.+.|++++++|+.+++.+++.+.+
T Consensus 37 ~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 113 (241)
T d1uaya_ 37 GEDLIYVEGDVTRE--EDVRRAVARAQEEAP-LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAW 113 (241)
T ss_dssp SSSSEEEECCTTCH--HHHHHHHHHHHHHSC-EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccceEeeccccch--hhhHHHHHhhhcccc-ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 45678899999998 888888888777655 455566655421 234556678899999999999999999999999
Q ss_pred HHHhc-----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 85 RMKES-----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 85 ~l~~~-----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
.+... .+.|+||++||..+... .+++..|+++|+|+.+|+|+++.|++++|||||+|+||+++|++......
T Consensus 114 ~~~~~~~~~~~~~G~Ii~isS~~~~~~--~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~- 190 (241)
T d1uaya_ 114 AMRENPPDAEGQRGVIVNTASVAAFEG--QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE- 190 (241)
T ss_dssp HHTTCCCCTTSCSEEEEEECCTHHHHC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH-
T ss_pred HhhhhhhhcccCceeeeeecchhhccC--CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh-
Confidence 86432 22689999999999733 68899999999999999999999999999999999999999998776443
Q ss_pred HHHHHHHHhhcC-CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 160 ERAVKLVREAAP-LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+...+.. ...| .+|+++|+ |+|++++||+| ++++|||+|.+|||+++.
T Consensus 191 ~~~~~~~-~~~~~~~R~g~pe-dvA~~v~fL~s--~~~iTG~~i~VDGG~~m~ 239 (241)
T d1uaya_ 191 KAKASLA-AQVPFPPRLGRPE-EYAALVLHILE--NPMLNGEVVRLDGALRMA 239 (241)
T ss_dssp HHHHHHH-TTCCSSCSCCCHH-HHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred hHHHHHH-hcCCCCCCCcCHH-HHHHHHHHHHh--CCCCCCCEEEECCcccCC
Confidence 2333333 4445 48999998 99999999998 479999999999999754
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.97 E-value=7.4e-31 Score=202.89 Aligned_cols=197 Identities=26% Similarity=0.351 Sum_probs=154.0
Q ss_pred CcceEEEEecCCccc--hhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCC-----------CCcCHHHHHHHHHhhhch
Q 027744 8 GQPVEVVGLDMEEDR--EGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDP-----------LQVGEDEFKKLVKINFVA 74 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~--~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~-----------~~~~~~~~~~~~~~n~~~ 74 (219)
+.+...+++|+.+.. ++.+.++++++.+++|++|++|||||+.. ..++ .+.....+...+..|+.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (266)
T d1mxha_ 51 AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA 129 (266)
T ss_dssp TTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred CCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCC-CCcccccccccchhccccccccccccccccccc
Confidence 446677777665541 15577778888899999999999999863 3322 223345688888999999
Q ss_pred HHHHHHHHHHHHHhc----CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccC
Q 027744 75 PWFLLKAVGRRMKES----KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 150 (219)
Q Consensus 75 ~~~l~~~~~~~l~~~----~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t 150 (219)
.+...+.....+... ...+.++++++..+... .+++..|+++|+|+++|+|+++++++++|||||+|+||+++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t 207 (266)
T d1mxha_ 130 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP--LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 207 (266)
T ss_dssp HHHHHHHHHHTC-------CCCEEEEEECCGGGGSC--CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred ccchhhhhccccccccccccccccchhhhhcccccc--CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEec
Confidence 999888887776542 12467888888887633 689999999999999999999999999999999999999999
Q ss_pred CCCccccchHHHHHHHHhhcCCCCC-CCCchhHHHHHHHhccCCCCcccceEEEecCCccccC
Q 027744 151 DEYPIAVGQERAVKLVREAAPLHRW-LDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSITR 212 (219)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~~ 212 (219)
++... + ...+...+..|+++. ++|+ |+|++++||+|+.++++||++|.+|||+++.+
T Consensus 208 ~~~~~---~-~~~~~~~~~~pl~r~~~~pe-eva~~v~fL~s~~s~~itG~~i~vDGG~~l~~ 265 (266)
T d1mxha_ 208 PPAMP---Q-ETQEEYRRKVPLGQSEASAA-QIADAIAFLVSKDAGYITGTTLKVDGGLILAR 265 (266)
T ss_dssp CSSSC---H-HHHHHHHTTCTTTSCCBCHH-HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred cccCC---H-HHHHHHHhcCCCCCCCCCHH-HHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence 86543 2 333344477888665 6777 99999999999999999999999999998865
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.97 E-value=2.3e-31 Score=206.08 Aligned_cols=195 Identities=21% Similarity=0.213 Sum_probs=157.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHh---CCCcEEEeccccCC----CCCCCCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQIL---GNLDAFVHCYTYEG----KMQDPLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~---g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
+.+...++||++++ +++..+++.+.+.+ +.+|++|||+|+.. ...++.+.+.++|.+.+.+|+.+.+...+
T Consensus 54 ~~~~~~~~~dv~~~--~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (268)
T d2h7ma1 54 PAKAPLLELDVQNE--EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAK 131 (268)
T ss_dssp SSCCCEEECCTTCH--HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCceeeEeeecccc--cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHH
Confidence 56778899999999 99999999998875 57999999999742 23456678899999999999999998888
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-- 158 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-- 158 (219)
...+.+.. +.+++++|.... .. .+.+..|+++|+|+.+|+|++++|++++|||||+|+||++.|++......
T Consensus 132 ~~~~~~~~----~~~i~~~s~~~~-~~-~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~ 205 (268)
T d2h7ma1 132 ALLPIMNP----GGSIVGMDFDPS-RA-MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGA 205 (268)
T ss_dssp HHGGGEEE----EEEEEEEECCCS-SC-CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTT
T ss_pred HHhhhccc----cccccccccccc-cc-CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccch
Confidence 87765432 344555554443 22 68889999999999999999999999999999999999999987543221
Q ss_pred --------hHHHHHHHHhhcCCCC-CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 --------QERAVKLVREAAPLHR-WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 --------~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.+...+......|+++ +++|+ |+|+++.||+|+.++++||++|.||||++..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~-dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~ 266 (268)
T d2h7ma1 206 LGEEAGAQIQLLEEGWDQRAPIGWNMKDAT-PVAKTVCALLSDWLPATTGDIIYADGGAHTQ 266 (268)
T ss_dssp TCHHHHHHHHHHHHHHHHHCTTCCCTTCCH-HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred hhhhhccchHHHHHHHHhcCCCCCCCCCHH-HHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence 1223334446678766 78888 9999999999999999999999999999764
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=1.3e-31 Score=203.63 Aligned_cols=178 Identities=16% Similarity=0.147 Sum_probs=149.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhC--CCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILG--NLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.....+.+|.++. ++++.+.+++.+.++ ++|++|||||.......+.+.+.++|++++++|+.+++++++.++|+|
T Consensus 41 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m 118 (236)
T d1dhra_ 41 SASVIVKMTDSFT--EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 118 (236)
T ss_dssp SEEEECCCCSCHH--HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred cccceeecccCcH--HHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhc
Confidence 3456677888887 888888888887764 699999999975455666777889999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++ +|+||++||.++... .+.+..|+++|+|+++|+|+++.|++ ++|||+|+|+||+++|++.....+.
T Consensus 119 ~~---~G~Iv~isS~~~~~~--~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----- 188 (236)
T d1dhra_ 119 KE---GGLLTLAGAKAALDG--TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----- 188 (236)
T ss_dssp EE---EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-----
T ss_pred cc---ccceeEEccHHHcCC--ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc-----
Confidence 65 589999999999733 68899999999999999999999998 5799999999999999876543222
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.+..++..|+ ++|+.+.+|+++...+++|+.+.|
T Consensus 189 -----~~~~~~~~pe-~va~~~~~l~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 189 -----ADFSSWTPLE-FLVETFHDWITGNKRPNSGSLIQV 222 (236)
T ss_dssp -----SCGGGSEEHH-HHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred -----chhhcCCCHH-HHHHHHHHHhCCCccCCCCCeEEE
Confidence 2234445565 999999999999999999987665
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.8e-31 Score=204.49 Aligned_cols=172 Identities=19% Similarity=0.138 Sum_probs=144.7
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++++++||++|. ++++++++++.+++|+||+||||||+. ......+.+.++|++++++|+.+++.+++.++|+|+
T Consensus 52 ~~~~~~~~~Dvs~~--~sv~~~~~~~~~~~g~iDiLVnNAGi~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~ 128 (275)
T d1wmaa1 52 GLSPRFHQLDIDDL--QSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK 128 (275)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHHHHHHSSEEEEEECCCCC-CCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred CCcEEEEEEecCCH--HHHHHHHHHHHHhcCCcEEEEEcCCcC-CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999 999999999999999999999999986 567777888899999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccc---------------------------------------cCCCCCcchhHHhHHHHHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAE---------------------------------------RGLYPGAAAYGACAASIHQLVRT 128 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~---------------------------------------~~~~~~~~~y~~sK~a~~~l~~~ 128 (219)
+ .|+||++||..+.. .....+...|+++|+++.+|++.
T Consensus 129 ~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~ 205 (275)
T d1wmaa1 129 P---QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRI 205 (275)
T ss_dssp E---EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHH
T ss_pred h---cCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHH
Confidence 5 58999999976531 01122346799999999999999
Q ss_pred HHHHhCC----CCeEEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhc--cCCCCcccceEE
Q 027744 129 AAMEIGK----HKIRVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLI--SDGSRYMTGTTI 202 (219)
Q Consensus 129 l~~e~~~----~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~i 202 (219)
+++++++ .||++|+|+||+|+|++..... ..+|+ |+|+++++++ +++...++|+++
T Consensus 206 la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~-----------------~~~pe-e~A~~~~~~a~~~~~~~~~~G~~~ 267 (275)
T d1wmaa1 206 HARKLSEQRKGDKILLNACCPGWVRTDMAGPKA-----------------TKSPE-EGAETPVYLALLPPDAEGPHGQFV 267 (275)
T ss_dssp HHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC-----------------SBCHH-HHTHHHHHHHSCCTTCCCCCSCEE
T ss_pred HHHHHHHHhCCCCeEEEEEecccccCCcccCcc-----------------cCCHH-HHHHHHHHHHcCChhhcCCCeEEE
Confidence 9999865 5899999999999999876421 12455 9999999986 456677889887
Q ss_pred E
Q 027744 203 Y 203 (219)
Q Consensus 203 ~ 203 (219)
.
T Consensus 268 ~ 268 (275)
T d1wmaa1 268 S 268 (275)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.97 E-value=4.5e-30 Score=196.81 Aligned_cols=180 Identities=16% Similarity=0.143 Sum_probs=143.8
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCC--CcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGN--LDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~--id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
.+.++++++||++|+ ++++++++++.+.++. +|++|||||+..+..++.+.+.++|++++++|+.+++.+++.++|
T Consensus 49 ~~~~~~~~~~Dvs~~--~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 126 (250)
T d1yo6a1 49 KDSRVHVLPLTVTCD--KSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLP 126 (250)
T ss_dssp CCTTEEEEECCTTCH--HHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred hCCceEEEEEecCCH--HHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 356899999999999 9999999999998764 999999999865667888999999999999999999999999999
Q ss_pred HHHhcC----------CCCeEEEeecccccccCC-----CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 85 RMKESK----------AGGSIVFLTSIIGAERGL-----YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 85 ~l~~~~----------~~g~iv~iss~~~~~~~~-----~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
+|++++ ..++++++++........ ..+..+|++||+|+.+|++++++|+++.||+|++|+||+|+
T Consensus 127 ~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~ 206 (250)
T d1yo6a1 127 LLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp HHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred HHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence 998642 137899998876553211 23456799999999999999999999999999999999999
Q ss_pred CCCCccccchHHHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 150 QDEYPIAVGQERAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 150 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
|+|..... ..+|+ +.++.++..+.......+|+++..||
T Consensus 207 T~m~~~~~-----------------~~~~e-~~a~~~~~~~~~~~~~~sG~f~~~~g 245 (250)
T d1yo6a1 207 TNLGGKNA-----------------ALTVE-QSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp -----------------------------H-HHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred CCCCCCCC-----------------CCCHH-HHHHHHHHHHhcCCCCCCeEEECCCC
Confidence 99865321 12455 88888888887766677999988775
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1.4e-29 Score=192.26 Aligned_cols=177 Identities=12% Similarity=0.072 Sum_probs=143.6
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHH--hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQI--LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
....+.+|+++. ++.....+.+.+. ++++|+||||||......+..+.+.++|+.++++|+.+++.+++.++|+|+
T Consensus 42 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~ 119 (235)
T d1ooea_ 42 SNILVDGNKNWT--EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 119 (235)
T ss_dssp EEEECCTTSCHH--HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ccceeccccCch--hHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccc
Confidence 445667788887 7777777777664 488999999999864445566677789999999999999999999999996
Q ss_pred hcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhC--CCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIG--KHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+ +|+|+++||..+..+ .+++..|+++|+|+++|+++++.|++ +.+|++|.|+||+++|++.+...+.
T Consensus 120 ~---~g~Iv~isS~~~~~~--~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~------ 188 (235)
T d1ooea_ 120 P---GGLLQLTGAAAAMGP--TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN------ 188 (235)
T ss_dssp E---EEEEEEECCGGGGSC--CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT------
T ss_pred c---ceEEEEeccHHhcCC--cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC------
Confidence 4 589999999998733 68899999999999999999999998 4789999999999999876543321
Q ss_pred HHhhcCCCCCCCCchhHHHHHH-HhccCCCCcccceEEEe
Q 027744 166 VREAAPLHRWLDVKNDLASTVI-YLISDGSRYMTGTTIYV 204 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~~G~~i~~ 204 (219)
.+..++..|+ ++++.++ |+.++..+.+||+.+.+
T Consensus 189 ----~~~~~~~~~~-~va~~~~~~l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 189 ----ADHSSWTPLS-FISEHLLKWTTETSSRPSSGALLKI 223 (235)
T ss_dssp ----CCGGGCBCHH-HHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred ----CccccCCCHH-HHHHHHHHHhcCccccCCCceEEEE
Confidence 2233445565 9999987 55566778899999998
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.96 E-value=6.3e-29 Score=191.05 Aligned_cols=185 Identities=21% Similarity=0.314 Sum_probs=130.8
Q ss_pred EecCCccchhHHHHHHHHHHHH-hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCC
Q 027744 15 GLDMEEDREGAFDEAVDKACQI-LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGG 93 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~-~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g 93 (219)
.+|+++. +..+....++..+ .+.+|++|||||+. + ..+.|.....+|..+...+.+...+.+.... ..
T Consensus 39 ~~d~~~~--~~~~~~~~~~~~~~~~~id~lv~~Ag~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 107 (257)
T d1fjha_ 39 IADLSTA--EGRKQAIADVLAKCSKGMDGLVLCAGLG-P-------QTKVLGNVVSVNYFGATELMDAFLPALKKGH-QP 107 (257)
T ss_dssp ECCTTSH--HHHHHHHHHHHTTCTTCCSEEEECCCCC-T-------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SC
T ss_pred HHHhcCH--HHHHHHHHHHHHHhCCCCcEEEEcCCCC-C-------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cC
Confidence 4677776 6666666555544 45799999999975 2 2244778889999999999999999887754 45
Q ss_pred eEEEeecccccc--------------------------cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCC
Q 027744 94 SIVFLTSIIGAE--------------------------RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGL 147 (219)
Q Consensus 94 ~iv~iss~~~~~--------------------------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~ 147 (219)
.+.++++..... .+..++...|+++|+|+++|+|+++.|++++|||||+|+||+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~ 187 (257)
T d1fjha_ 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGA 187 (257)
T ss_dssp EEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC
T ss_pred cceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCC
Confidence 555554432210 111233457999999999999999999999999999999999
Q ss_pred ccCCCCccccchHHHHH-HHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 148 HLQDEYPIAVGQERAVK-LVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 148 v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
++|++......++...+ ......|++|+++|+ |+|+++.||+|+.++++|||+|.+|||++..
T Consensus 188 i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~-eva~~v~fL~S~~s~~itG~~i~vDGG~tav 251 (257)
T d1fjha_ 188 TETPLLQAGLQDPRYGESIAKFVPPMGRRAEPS-EMASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp ---------------------CCCSTTSCCCTH-HHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred cCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHH-HHHHHHHHHhCchhCCccCceEEeCCCccch
Confidence 99999876655444333 333346999999998 9999999999999999999999999999643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.4e-26 Score=177.61 Aligned_cols=166 Identities=20% Similarity=0.205 Sum_probs=139.7
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+..+..+.+|+++. +++..+.+.+.+.+|.+|++|||||.. ...++.+.+.++|++++++|+.+++.+++.++|+|
T Consensus 62 ~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~g~~~~li~nag~~-~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m 138 (269)
T d1xu9a_ 62 GAASAHYIAGTMEDM--TFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPML 138 (269)
T ss_dssp TCSEEEEEECCTTCH--HHHHHHHHHHHHHHTSCSEEEECCCCC-CCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hcccchhhhhhhhhH--HHHHHHHHHHHHHhCCccccccccccc-cccccccCCHHHhhhheeeehhhHHHHHHHHHHHH
Confidence 456788999999999 999999999999999999999999985 67888899999999999999999999999999999
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCC--CCeEEEEeecCCccCCCCccccchHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGK--HKIRVNGIARGLHLQDEYPIAVGQERAVK 164 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~ 164 (219)
++. +|+||++||.++..+ .+.+..|++||+|+++|+++|+.|+++ .||+|++|+||+|+|++........
T Consensus 139 ~~~--~G~ii~isS~~~~~~--~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~---- 210 (269)
T d1xu9a_ 139 KQS--NGSIVVVSSLAGKVA--YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI---- 210 (269)
T ss_dssp HHH--TCEEEEEEEGGGTSC--CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----
T ss_pred Hhc--CCcceEeccchhcCC--CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----
Confidence 865 599999999999733 689999999999999999999999974 5799999999999998755322211
Q ss_pred HHHhhcCCCCCCCCchhHHHHHHHhc
Q 027744 165 LVREAAPLHRWLDVKNDLASTVIYLI 190 (219)
Q Consensus 165 ~~~~~~~~~~~~~~~~dva~~~~~l~ 190 (219)
+.....+++ ++|+.++...
T Consensus 211 ------~~~~~~~~e-~~a~~i~~~~ 229 (269)
T d1xu9a_ 211 ------VHMQAAPKE-ECALEIIKGG 229 (269)
T ss_dssp ------GGGGCBCHH-HHHHHHHHHH
T ss_pred ------ccccCCCHH-HHHHHHHHHh
Confidence 111112334 7888777655
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.83 E-value=1.8e-20 Score=143.57 Aligned_cols=176 Identities=13% Similarity=0.086 Sum_probs=130.0
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
.+.++.++.||++|. ++++++++.+.+. +++|++|||+|.. ...++.+.+.++|+..+++|+.+++++.+.+
T Consensus 60 ~g~~v~~~~~Dv~d~--~~~~~~~~~i~~~-~~i~~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~---- 131 (259)
T d2fr1a1 60 LGARTTVAACDVTDR--ESVRELLGGIGDD-VPLSAVFHAAATL-DDGTVDTLTGERIERASRAKVLGARNLHELT---- 131 (259)
T ss_dssp TTCEEEEEECCTTCH--HHHHHHHHTSCTT-SCEEEEEECCCCC-CCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----
T ss_pred ccccccccccccchH--HHHHHhhcccccc-ccccccccccccc-cccccccccHHHHHHHhhhhccchhHHHHHh----
Confidence 356899999999999 9999999988654 6799999999986 7789999999999999999999999887753
Q ss_pred HhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHH
Q 027744 87 KESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLV 166 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~ 166 (219)
...+ .++||++||..+. .+ .+++..|+++|+++++|++.++. .|+++++|+||.+.++...... .....
T Consensus 132 ~~~~-~~~iv~~SS~a~~-~g-~~~~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~----~~~~~ 200 (259)
T d2fr1a1 132 RELD-LTAFVLFSSFASA-FG-APGLGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP----VADRF 200 (259)
T ss_dssp TTSC-CSEEEEEEEHHHH-TC-CTTCTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC----------------C
T ss_pred hccC-CceEeeecchhhc-cC-CcccHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccch----HHHHH
Confidence 3333 6899999999997 34 68899999999999988776654 5899999999998765433211 11111
Q ss_pred HhhcCCC-CCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 167 REAAPLH-RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 167 ~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
...+ ...+|+ ++++.+..+++.. .....++.+|..
T Consensus 201 ---~~~G~~~~~~~-~~~~~l~~~l~~~--~~~~~v~~~d~~ 236 (259)
T d2fr1a1 201 ---RRHGVIEMPPE-TACRALQNALDRA--EVCPIVIDVRWD 236 (259)
T ss_dssp ---TTTTEECBCHH-HHHHHHHHHHHTT--CSSCEECEECHH
T ss_pred ---HhcCCCCCCHH-HHHHHHHHHHhCC--CceEEEEeCcHH
Confidence 1111 123444 8999998888643 334556666644
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=3e-12 Score=101.59 Aligned_cols=181 Identities=6% Similarity=-0.044 Sum_probs=125.9
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|. ++++++++.. .+|+++|+|+...... +.++.+..+++|+.++.++++++...-.
T Consensus 54 ~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~ 121 (357)
T d1db3a_ 54 NPKFHLHYGDLSDT--SNLTRILREV-----QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGL 121 (357)
T ss_dssp -CCEEECCCCSSCH--HHHHHHHHHH-----CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEeecCCH--HHHHHHHhcc-----CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45789999999999 8988888765 5899999999853322 2344566789999999999999865432
Q ss_pred hcCCCCeEEEeecccccc---------cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc
Q 027744 88 ESKAGGSIVFLTSIIGAE---------RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG 158 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~---------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~ 158 (219)
+. ..++|++||...+- ..+..+...|+.+|.+.+.+++.+++.+ ++.+..++|+.+.+|.......
T Consensus 122 ~~--~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~ 196 (357)
T d1db3a_ 122 EK--KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFV 196 (357)
T ss_dssp TT--TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSH
T ss_pred CC--CcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCC
Confidence 21 36899999976541 1112356789999999999999998875 6889999999999886544333
Q ss_pred hHHHHHHHHh----hcCC---C------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 159 QERAVKLVRE----AAPL---H------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 159 ~~~~~~~~~~----~~~~---~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
.......... .... + .+... +|+++++..++.. -.|+.+++.+|..+
T Consensus 197 ~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v-~D~~~a~~~~~~~----~~~~~yni~sg~~~ 256 (357)
T d1db3a_ 197 TRKITRAIANIAQGLESCLYLGNMDSLRDWGHA-KDYVKMQWMMLQQ----EQPEDFVIATGVQY 256 (357)
T ss_dssp HHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH-HHHHHHHHHTTSS----SSCCCEEECCCCCE
T ss_pred chHHHHHHHHHHhCCCceEEECCCCeeecceee-chHHHHHHHHHhC----CCCCeEEECCCCce
Confidence 2222222211 1110 1 12334 4999999887753 25788999887764
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.39 E-value=2.9e-12 Score=101.83 Aligned_cols=187 Identities=15% Similarity=0.123 Sum_probs=129.1
Q ss_pred CCCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHH
Q 027744 5 LKGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGR 84 (219)
Q Consensus 5 ~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 84 (219)
+....+++++.+|++|. +++..+++.. .+|+|||+|+.... ..+.++....+++|+.++..+++.+..
T Consensus 46 ~~~~~~~~~~~~Dl~d~--~~l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~ 113 (361)
T d1kewa_ 46 ISESNRYNFEHADICDS--AEITRIFEQY-----QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARK 113 (361)
T ss_dssp TTTCTTEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHH
T ss_pred hhhcCCcEEEEccCCCH--HHHHHHHHhC-----CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 34456899999999999 8887777653 68999999996421 122344567899999999999999987
Q ss_pred HHHhcC----CCCeEEEeeccccccc-------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEE
Q 027744 85 RMKESK----AGGSIVFLTSIIGAER-------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141 (219)
Q Consensus 85 ~l~~~~----~~g~iv~iss~~~~~~-------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~ 141 (219)
...... ...++|++||...+.. .+..+...|+.+|.+.+.+++.+++.+ |+.+.
T Consensus 114 ~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~ 190 (361)
T d1kewa_ 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTI 190 (361)
T ss_dssp HHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEE
T ss_pred hhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEE
Confidence 654310 1368999999875511 111244669999999999999998875 78999
Q ss_pred EeecCCccCCCCccccchHHHHHHHHhhcCCCC---------CCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 142 GIARGLHLQDEYPIAVGQERAVKLVREAAPLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 142 ~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
+++|+.+.+|.......-...........++.- +... +|+|+++..++... ..|..+++.+|...
T Consensus 191 ~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v-~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~ 264 (361)
T d1kewa_ 191 VTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV-EDHARALHMVVTEG---KAGETYNIGGHNEK 264 (361)
T ss_dssp EEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH-HHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred EEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH-HHHHHHHHHHHhcC---CCCCeEEECCCCCc
Confidence 999999998765432111122222223333211 2333 49999999988643 34788999888754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.11 E-value=5.1e-10 Score=87.08 Aligned_cols=179 Identities=15% Similarity=0.128 Sum_probs=122.6
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++.++.+|+++. +..... ...+|.++|.|+.... ..........+++|+.++..+++++...
T Consensus 53 ~~~~~~~~~~d~~~~--~~~~~~-------~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~- 117 (322)
T d1r6da_ 53 ADPRLRFVHGDIRDA--GLLARE-------LRGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA- 117 (322)
T ss_dssp TCTTEEEEECCTTCH--HHHHHH-------TTTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-
T ss_pred cCCCeEEEEeccccc--hhhhcc-------ccccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHHc-
Confidence 345788999999987 444432 2468999999986421 1234455677889999999999988642
Q ss_pred HhcCCCCeEEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 87 KESKAGGSIVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
+ ..++|+.||...+.. .+..+...|+.+|.+.+.+++.++++. |+.+..++|+.+.++......
T Consensus 118 ---~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~ 190 (322)
T d1r6da_ 118 ---G-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEK 190 (322)
T ss_dssp ---T-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTS
T ss_pred ---C-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCc
Confidence 2 468999999876521 112355789999999999999998875 799999999999987644322
Q ss_pred chHHHHHHHHhhcCCCC---------CCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLVREAAPLHR---------WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
.-...........++.- +... +|+|+++..++... ..|+++++.+|....
T Consensus 191 ~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v-~D~a~ai~~~~~~~---~~~~~~ni~~~~~~s 249 (322)
T d1r6da_ 191 LIPLFVTNLLDGGTLPLYGDGANVREWVHT-DDHCRGIALVLAGG---RAGEIYHIGGGLELT 249 (322)
T ss_dssp HHHHHHHHHHTTCCEEEETTSCCEEEEEEH-HHHHHHHHHHHHHC---CTTCEEEECCCCEEE
T ss_pred HHHHHHHHHHcCCCcEEecCCCeEEccEEH-HHHHHHHHHHHhCC---CCCCeeEEeecccch
Confidence 11222222212223221 2233 59999999999653 358899998887554
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=1.1e-09 Score=85.65 Aligned_cols=125 Identities=10% Similarity=0.065 Sum_probs=94.2
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|++|. +.+.++++.. ++|+|||.|+.... ..+.++....+++|+.++.++++++...
T Consensus 50 ~~~~~~~~Dl~d~--~~l~~~~~~~-----~~d~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~--- 114 (338)
T d1udca_ 50 KHPTFVEGDIRNE--ALMTEILHDH-----AIDTVIHFAGLKAV-----GESVQKPLEYYDNNVNGTLRLISAMRAA--- 114 (338)
T ss_dssp SCCEEEECCTTCH--HHHHHHHHHT-----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCEEEEeecCCH--HHHHHHHhcc-----CCCEEEECCCccch-----hhHHhCHHHHHHhHHHHHHHHHHHHHHh---
Confidence 4788999999998 7777777652 58999999996421 1233455688999999999999988754
Q ss_pred cCCCCeEEEeecccccccC----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCC
Q 027744 89 SKAGGSIVFLTSIIGAERG----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDE 152 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~ 152 (219)
+ -.++|+.||...+... ...+...|+.+|.+.+.+++....+. .++.+..++|+.+.++.
T Consensus 115 -~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~ 184 (338)
T d1udca_ 115 -N-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH 184 (338)
T ss_dssp -T-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred -C-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence 1 3679999998765111 11356789999999999999877764 36888889998888764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=4.1e-09 Score=82.42 Aligned_cols=180 Identities=9% Similarity=0.074 Sum_probs=117.5
Q ss_pred CCCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHH
Q 027744 6 KGGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRR 85 (219)
Q Consensus 6 ~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 85 (219)
....++.++.+|+++. +++.+.+. + .+|++||+|+..... ...++....+.+|+.++.++++++...
T Consensus 42 ~~~~~~~~i~~Di~~~--~~~~~~~~---~---~~d~Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~ 108 (342)
T d2blla1 42 LNHPHFHFVEGDISIH--SEWIEYHV---K---KCDVVLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY 108 (342)
T ss_dssp TTCTTEEEEECCTTTC--SHHHHHHH---H---HCSEEEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT
T ss_pred ccCCCeEEEECccCCh--HHHHHHHH---h---CCCcccccccccccc-----ccccCCccccccccccccccccccccc
Confidence 3456799999999987 66544322 1 489999999975211 122344577899999999999997542
Q ss_pred HHhcCCCCeEEEeecccccccC----------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCcc
Q 027744 86 MKESKAGGSIVFLTSIIGAERG----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHL 149 (219)
Q Consensus 86 l~~~~~~g~iv~iss~~~~~~~----------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~ 149 (219)
+.++++.||...+... ...+...|+.+|.+.+.+++.+++.. |+.+..++|..+.
T Consensus 109 ------~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~ 179 (342)
T d2blla1 109 ------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWM 179 (342)
T ss_dssp ------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEE
T ss_pred ------cccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccc
Confidence 3567777776654111 01234679999999999999998876 7889999988877
Q ss_pred CCCCcccc-----chHHHHHHH---HhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 150 QDEYPIAV-----GQERAVKLV---REAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 150 t~~~~~~~-----~~~~~~~~~---~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.+...... ......... ....+ .+.+...+ |+++++..++........|+++++.+|.
T Consensus 180 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~-D~~~a~~~~~~~~~~~~~g~~~Nig~~~ 254 (342)
T d2blla1 180 GPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIR-DGIEALYRIIENAGNRCDGEIINIGNPE 254 (342)
T ss_dssp CSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHH-HHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred cccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccc-cccceeeeehhhccccCCCeEEEEeccc
Confidence 76433221 111111111 11111 11234444 9999999998765445568999996553
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.01 E-value=6.9e-09 Score=82.69 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=96.1
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.+++++++|++|. +.++.+++.. ++|+|+|.|+... ......+.+.....+.+|+.++.++++.+...-.
T Consensus 66 ~~~i~~~~~Dl~d~--~~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~ 136 (393)
T d1i24a_ 66 GKSIELYVGDICDF--EFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE 136 (393)
T ss_dssp CCCCEEEESCTTSH--HHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCcEEEEccCCCH--HHHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhcc
Confidence 35689999999999 8888888765 6999999998642 1222345667778899999999999998765422
Q ss_pred hcCCCCeEEEeeccccccc----------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeec
Q 027744 88 ESKAGGSIVFLTSIIGAER----------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIAR 145 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~----------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~p 145 (219)
..++++.||...+.. .+..+...|+.+|.+.+.+++.++++. ++++..++|
T Consensus 137 ----~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~ 209 (393)
T d1i24a_ 137 ----ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQ 209 (393)
T ss_dssp ----TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE
T ss_pred ----ccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeeccc
Confidence 345677776654310 012334579999999999999988875 789999999
Q ss_pred CCccCCCC
Q 027744 146 GLHLQDEY 153 (219)
Q Consensus 146 G~v~t~~~ 153 (219)
+.+..+..
T Consensus 210 ~~v~G~~~ 217 (393)
T d1i24a_ 210 GVVYGVKT 217 (393)
T ss_dssp CEEECSCC
T ss_pred ccccCCCc
Confidence 88887643
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=98.95 E-value=1.2e-08 Score=79.95 Aligned_cols=173 Identities=16% Similarity=0.197 Sum_probs=112.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|+.|. +.+..++. ..|.++|.|+..... ....+....+++|+.++.+++..+...
T Consensus 51 ~~~i~~~~~Di~d~--~~~~~~~~-------~~~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~-- 114 (346)
T d1oc2a_ 51 GDRVELVVGDIADA--ELVDKLAA-------KADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKY-- 114 (346)
T ss_dssp SSSEEEEECCTTCH--HHHHHHHT-------TCSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHH--
T ss_pred cCCeEEEEccCCCH--HHHHHHHh-------hhhhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhccc--
Confidence 45789999999998 77766653 578899998875221 122334577899999999998877543
Q ss_pred hcCCCCeEEEeeccccccc---------------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecC
Q 027744 88 ESKAGGSIVFLTSIIGAER---------------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARG 146 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~---------------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG 146 (219)
+.+++++||...+.. .+..+...|+.+|.+.+.+++.+++++ ++++.+++|+
T Consensus 115 ----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~ 187 (346)
T d1oc2a_ 115 ----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCS 187 (346)
T ss_dssp ----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred ----cccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeec
Confidence 357888887765410 011244679999999999999998875 7999999999
Q ss_pred CccCCCCccccc-hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 147 LHLQDEYPIAVG-QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 147 ~v~t~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
.+.+|....... ........ ...+.. .+... +|++++++.++... ..|..+++.+|-
T Consensus 188 ~vyGp~~~~~~~~~~~i~~~~-~~~~~~i~~~g~~~r~~i~v-~D~a~a~~~~~~~~---~~~~~~~~~~~~ 254 (346)
T d1oc2a_ 188 NNYGPYQHIEKFIPRQITNIL-AGIKPKLYGEGKNVRDWIHT-NDHSTGVWAILTKG---RMGETYLIGADG 254 (346)
T ss_dssp CEESTTCCTTSHHHHHHHHHH-HTCCCEEETTSCCEEECEEH-HHHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred ceeCCCCCccchhHHHHHHHH-cCCceeEeCCCCccccccch-hhHHHHHHHHHhhc---ccCccccccccc
Confidence 998864322111 11222222 222211 12333 49999988877543 235555555443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=7.8e-09 Score=80.85 Aligned_cols=166 Identities=8% Similarity=-0.013 Sum_probs=111.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +.+..+++.. .+++++|.++.... ..+.+.....+++|+.++.++++++..+-..
T Consensus 56 ~~~~~~~~Dl~d~--~~~~~~~~~~-----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~ 123 (347)
T d1t2aa_ 56 GNMKLHYGDLTDS--TCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI 123 (347)
T ss_dssp -CEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT
T ss_pred CCcEEEEeecCCc--hhhHHHHhhc-----ccceeeeeeecccc-----chhhccchhhhhhHHHHHHHHHHHHHHcCCC
Confidence 4688999999999 8888887664 57889988876421 1234555667899999999999988765332
Q ss_pred cCCCCeEEEeecccccc---------cCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch
Q 027744 89 SKAGGSIVFLTSIIGAE---------RGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ 159 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~---------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~ 159 (219)
. ..++|++||.+.+- ..+..+...|+.+|.+.+.+++.+++.+ ++.+..++|+.+.+|........
T Consensus 124 ~--~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~ 198 (347)
T d1t2aa_ 124 N--SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVT 198 (347)
T ss_dssp T--TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHH
T ss_pred C--CcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccc
Confidence 2 35899999876541 1112345689999999999999988775 68888999988888754332222
Q ss_pred HHHHH-HH---HhhcCCC---------CCCCCchhHHHHHHHhccC
Q 027744 160 ERAVK-LV---REAAPLH---------RWLDVKNDLASTVIYLISD 192 (219)
Q Consensus 160 ~~~~~-~~---~~~~~~~---------~~~~~~~dva~~~~~l~s~ 192 (219)
..... .. ....+.. .+... +|+++++..++..
T Consensus 199 ~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v-~D~~~a~~~~~~~ 243 (347)
T d1t2aa_ 199 RKISRSVAKIYLGQLECFSLGNLDAKRDWGHA-KDYVEAMWLMLQN 243 (347)
T ss_dssp HHHHHHHHHHHHTSCSCEEESCTTCEECCEEH-HHHHHHHHHHHHS
T ss_pred cccceeeehhhcCCcceeecCCCcceeeeeEe-cHHHHHHHHHhhc
Confidence 11111 11 1111111 12333 4999999988864
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.87 E-value=3.6e-08 Score=76.67 Aligned_cols=169 Identities=9% Similarity=-0.021 Sum_probs=113.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
..+.++.+|+++. +++...++.. ++|++||+|+..... ...+.....+..|+.++..++.++......
T Consensus 56 ~~~~~~~~Di~~~--~~~~~~~~~~-----~~D~Vih~Aa~~~~~-----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~ 123 (339)
T d1n7ha_ 56 ALMKLHYADLTDA--SSLRRWIDVI-----KPDEVYNLAAQSHVA-----VSFEIPDYTADVVATGALRLLEAVRSHTID 123 (339)
T ss_dssp CCEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cceEEEEccccCH--HHHHHHHhhh-----ccchhhhcccccccc-----ccccCccccccccccccchhhhhhhhcccc
Confidence 4578999999998 7877777653 699999999975211 223455678899999999999998776555
Q ss_pred cCCCCeEEEeeccccccc--------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 89 SKAGGSIVFLTSIIGAER--------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~--------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
.....++++.||...... .+..+...|+.+|.+.+.+++.+++.. ++.+..++|+.+.+|.........
T Consensus 124 ~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~ 200 (339)
T d1n7ha_ 124 SGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTR 200 (339)
T ss_dssp HCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHH
T ss_pred cccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcc
Confidence 432345666666543211 112356789999999999999988875 799999999999988654433222
Q ss_pred HHHHHH----HhhcCC---------CCCCCCchhHHHHHHHhccCC
Q 027744 161 RAVKLV----REAAPL---------HRWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 161 ~~~~~~----~~~~~~---------~~~~~~~~dva~~~~~l~s~~ 193 (219)
...... ....+. +.+... +|+++++..++...
T Consensus 201 ~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v-~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 201 KITRALGRIKVGLQTKLFLGNLQASRDWGFA-GDYVEAMWLMLQQE 245 (339)
T ss_dssp HHHHHHHHHHHTSCCCEEESCTTCEEECEEH-HHHHHHHHHHHTSS
T ss_pred hhhHHHHHHhcCCCCeEEeCCCCccccceee-ehHHHHHHHHHhcC
Confidence 222111 111111 112333 49999999888653
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=1.5e-08 Score=78.28 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=103.3
Q ss_pred CCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccC----------
Q 027744 38 GNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERG---------- 107 (219)
Q Consensus 38 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~---------- 107 (219)
.++|+|||+|+..... ....+..+.+++|+.++.++++++... +.++|++||.+.+...
T Consensus 64 ~~~d~VihlAa~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~~~~~~~~~e~~~ 132 (312)
T d2b69a1 64 IEVDQIYHLASPASPP-----NYMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYGDPEVHPQSEDYW 132 (312)
T ss_dssp CCCSEEEECCSCCSHH-----HHTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred cCCCEEEECcccCCch-----hHHhCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheecCCCCCCCCcccc
Confidence 3699999999975211 112344667899999999999887532 3579999997665211
Q ss_pred ----CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch---HHHHHHHHhhcCC--------
Q 027744 108 ----LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ---ERAVKLVREAAPL-------- 172 (219)
Q Consensus 108 ----~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~-------- 172 (219)
+..+...|+.+|.+.+.+++.+++.. |+.+..++|+.+.+|........ ....... ...+.
T Consensus 133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~-~g~~i~i~~~g~~ 208 (312)
T d2b69a1 133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQAL-QGEPLTVYGSGSQ 208 (312)
T ss_dssp CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHH-HTCCEEEESSSCC
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHH-cCCCeEEeCCCCe
Confidence 12356789999999999999999875 79999999999998765443221 1122222 22221
Q ss_pred -CCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 173 -HRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 173 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
+.+... +|+++++..++... .+..+++.+|...+
T Consensus 209 ~r~~i~v-~D~~~~~~~~~~~~----~~~~~n~~~~~~~~ 243 (312)
T d2b69a1 209 TRAFQYV-SDLVNGLVALMNSN----VSSPVNLGNPEEHT 243 (312)
T ss_dssp EEECEEH-HHHHHHHHHHHTSS----CCSCEEESCCCEEE
T ss_pred eEccEEH-HHHHHHHHHHHhhc----cCCceEecCCcccc
Confidence 112233 49999998888532 35568888887654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.81 E-value=4.5e-08 Score=75.56 Aligned_cols=181 Identities=11% Similarity=-0.010 Sum_probs=117.5
Q ss_pred CCcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHH
Q 027744 7 GGQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRM 86 (219)
Q Consensus 7 ~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 86 (219)
...++.++.+|++|. +++..++... ..++++|+++.... . ...++....+.+|+.++.+++.++...-
T Consensus 47 ~~~~~~~~~~Dl~d~--~~~~~~~~~~-----~~~~~~~~a~~~~~-~----~~~~~~~~~~~~n~~g~~~~l~~~~~~~ 114 (321)
T d1rpna_ 47 IEGDIQYEDGDMADA--CSVQRAVIKA-----QPQEVYNLAAQSFV-G----ASWNQPVTTGVVDGLGVTHLLEAIRQFS 114 (321)
T ss_dssp CGGGEEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-H----HHTTSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred ccCCcEEEEccccCh--HHhhhhhccc-----cccccccccccccc-c----ccccchHHHHhhhhhchHHHHHHHHHhC
Confidence 346789999999998 7877777654 46788888876421 1 1123356778999999999988876532
Q ss_pred HhcCCCCeEEEeeccccc---------ccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCcccc
Q 027744 87 KESKAGGSIVFLTSIIGA---------ERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAV 157 (219)
Q Consensus 87 ~~~~~~g~iv~iss~~~~---------~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~ 157 (219)
. ..++++.|+..-+ +..+..+...|+.+|.+.+.+++.++... ++++..++|+.+.+|......
T Consensus 115 ~----~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~ 187 (321)
T d1rpna_ 115 P----ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEF 187 (321)
T ss_dssp T----TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTS
T ss_pred C----CcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccc
Confidence 2 3467777765433 11112356889999999999999998875 688999999888887654332
Q ss_pred chHHHHHHH----HhhcCC---C------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 158 GQERAVKLV----REAAPL---H------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 158 ~~~~~~~~~----~~~~~~---~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
......... ....+. + .+... +|+++++..++... .+..+++.+|...+
T Consensus 188 ~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v-~D~~~~~~~~~~~~----~~~~~ni~~~~~~s 249 (321)
T d1rpna_ 188 VTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA-GDYVEAMWLMLQQD----KADDYVVATGVTTT 249 (321)
T ss_dssp HHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH-HHHHHHHHHHHHSS----SCCCEEECCSCEEE
T ss_pred cHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe-HHHHHHHHHHHhcC----CcCCceecccccce
Confidence 221121111 111111 1 12333 49999999988543 24557887776543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.73 E-value=3.3e-08 Score=77.35 Aligned_cols=125 Identities=10% Similarity=0.082 Sum_probs=90.8
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.+++++.+|++|. ++++.+++.. ++|++||+|+..... ...+.-.....+|+.++.++++++...
T Consensus 51 ~~v~~~~~Dl~d~--~~l~~~~~~~-----~~d~VihlAa~~~~~-----~~~~~~~~~~~~N~~~t~~ll~~~~~~--- 115 (347)
T d1z45a2 51 HHIPFYEVDLCDR--KGLEKVFKEY-----KIDSVIHFAGLKAVG-----ESTQIPLRYYHNNILGTVVLLELMQQY--- 115 (347)
T ss_dssp SCCCEEECCTTCH--HHHHHHHHHS-----CCCEEEECCSCCCHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred cCCeEEEeecCCH--HHHHHHHhcc-----CCCEEEEcccccccc-----ccccCcccccccchhhhHHHHHHHHhc---
Confidence 4688899999998 8877776642 599999999975211 122344667889999999999998643
Q ss_pred cCCCCeEEEeeccccccc-------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 89 SKAGGSIVFLTSIIGAER-------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~-------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
+ -.+++++||...+.. .+..+...|+.+|.+.+.+++.+.+.. ..++.+..++|+.+..+
T Consensus 116 -~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~ 188 (347)
T d1z45a2 116 -N-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA 188 (347)
T ss_dssp -T-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred -c-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence 1 358999999776521 112345679999999999999988754 34678888887665543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=98.71 E-value=5.2e-07 Score=71.30 Aligned_cols=128 Identities=16% Similarity=0.100 Sum_probs=93.8
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..++.++.+|++|. +.++++++. ..++|+++|.|+..... ...+.....+++|+.++..+++++...
T Consensus 68 ~~~~~~~~~Di~d~--~~l~~~~~~----~~~~d~ViH~Aa~~~~~-----~~~~~~~~~~~~N~~~t~~~l~~~~~~-- 134 (383)
T d1gy8a_ 68 DRYAALEVGDVRNE--DFLNGVFTR----HGPIDAVVHMCAFLAVG-----ESVRDPLKYYDNNVVGILRLLQAMLLH-- 134 (383)
T ss_dssp TCCCEEEESCTTCH--HHHHHHHHH----SCCCCEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred ccceEEEECcccCH--HHhhhhhhc----cceeehhhccccccccc-----ccccccccccccccccccccchhhhcc--
Confidence 45688999999998 776666654 46799999999975211 223445667889999999998887642
Q ss_pred hcCCCCeEEEeeccccccc----------------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCC
Q 027744 88 ESKAGGSIVFLTSIIGAER----------------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQD 151 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~----------------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~ 151 (219)
+ ..++++.++...+.. .+..+...|+.+|.+.+.+++.+.+.+ |+.+.+++|+.+.++
T Consensus 135 --~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~ 208 (383)
T d1gy8a_ 135 --K-CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA 208 (383)
T ss_dssp --T-CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred --C-CcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeecc
Confidence 2 356777776654311 112346789999999999999988875 789999999888876
Q ss_pred CCc
Q 027744 152 EYP 154 (219)
Q Consensus 152 ~~~ 154 (219)
...
T Consensus 209 ~~~ 211 (383)
T d1gy8a_ 209 HED 211 (383)
T ss_dssp CTT
T ss_pred Ccc
Confidence 544
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=98.68 E-value=2.9e-08 Score=77.62 Aligned_cols=172 Identities=13% Similarity=0.107 Sum_probs=106.2
Q ss_pred eEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 027744 11 VEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESK 90 (219)
Q Consensus 11 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 90 (219)
...+..|++|. +++..++. .+|+++|+++.... ..+ ....+..|+.++.++++.+... +
T Consensus 64 ~~~~~~Dl~~~--~~~~~~~~-------~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~~----~ 122 (342)
T d1y1pa1 64 ETAVVEDMLKQ--GAYDEVIK-------GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAAT----P 122 (342)
T ss_dssp EEEECSCTTST--TTTTTTTT-------TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHTC----T
T ss_pred cEEEeccccch--hhhhhhcc-------cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhcc----c
Confidence 44577899888 66655543 58999999987521 122 3455778999988888887542 2
Q ss_pred CCCeEEEeecccccccC-----------------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEE
Q 027744 91 AGGSIVFLTSIIGAERG-----------------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141 (219)
Q Consensus 91 ~~g~iv~iss~~~~~~~-----------------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~ 141 (219)
.-.++|++||..+...+ +..+...|+.+|.+.+.+++.+.+... .++++.
T Consensus 123 ~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~ 201 (342)
T d1y1pa1 123 SVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLN 201 (342)
T ss_dssp TCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEE
T ss_pred ccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccc
Confidence 14789999997542110 011234699999999999999988765 368888
Q ss_pred EeecCCccCCCCccccc----hHHHHHHHHhh-------cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCC
Q 027744 142 GIARGLHLQDEYPIAVG----QERAVKLVREA-------APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGA 207 (219)
Q Consensus 142 ~i~pG~v~t~~~~~~~~----~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG 207 (219)
.++|+.+.++....... ........... .....+.... |+|++.+..+.. ....|+.+...++
T Consensus 202 ~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~-Dva~~~i~~l~~--~~~~g~~~~~~~~ 275 (342)
T d1y1pa1 202 AVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV-DIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp EEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHH-HHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred eecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHH-HHHHHHHHhhcC--ccccceEEEEcCC
Confidence 99998887765432211 11111111111 1111234445 899987776643 2346666655444
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=4.5e-07 Score=70.53 Aligned_cols=177 Identities=7% Similarity=-0.020 Sum_probs=117.2
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++.++.+|+.|. ...... ....+.++|.++.... ....++....+++|+.++..+++++...
T Consensus 71 ~~~~~~~d~~d~--~~~~~~-------~~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~---- 132 (341)
T d1sb8a_ 71 NFKFIQGDIRNL--DDCNNA-------CAGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA---- 132 (341)
T ss_dssp TEEEEECCTTSH--HHHHHH-------HTTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----
T ss_pred CeeEEeeccccc--cccccc-------cccccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc----
Confidence 477888999887 433322 2457899988876421 1245667788999999999999988643
Q ss_pred CCCCeEEEeecccccccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc--
Q 027744 90 KAGGSIVFLTSIIGAERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG-- 158 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~-- 158 (219)
+ -.++|++||...+... +..+...|+.+|.+.+.+++.+++.. ++++..++|+.+.++.......
T Consensus 133 ~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~ 208 (341)
T d1sb8a_ 133 K-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYA 208 (341)
T ss_dssp T-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTC
T ss_pred C-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchh
Confidence 2 3589999998765211 12355789999999999999998876 6889999999888775432211
Q ss_pred ---hHHHHHHHHhhcCCC---------CCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 159 ---QERAVKLVREAAPLH---------RWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 159 ---~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
........ ...+.. .+...+ |++.++..++.... ...|+.+++.++...+
T Consensus 209 ~~i~~~~~~~~-~g~~i~~~g~g~~~r~~i~v~-D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~s 270 (341)
T d1sb8a_ 209 AVIPKWTSSMI-QGDDVYINGDGETSRDFCYIE-NTVQANLLAATAGL-DARNQVYNIAVGGRTS 270 (341)
T ss_dssp CHHHHHHHHHH-HTCCCEEESSSCCEECCEEHH-HHHHHHHHHHTCCG-GGCSEEEEESCSCCEE
T ss_pred hhHHHHHHHHH-cCCceEEcCCCCEEEEEEEEe-ccchhhhhhhhccc-cccceeeeecccccch
Confidence 11112222 222221 123334 89998887765432 3468888887766443
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.65 E-value=7.5e-08 Score=75.18 Aligned_cols=184 Identities=13% Similarity=0.093 Sum_probs=118.5
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
+.++.++.+|++|. +++..++.. ..+++++|.|+.... ..+.++....+++|+.++.++++++...
T Consensus 57 ~~~~~~~~~Dl~d~--~~l~~~~~~-----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-- 122 (346)
T d1ek6a_ 57 GRSVEFEEMDILDQ--GALQRLFKK-----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKAH-- 122 (346)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHH-----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCcEEEEeecccc--ccccccccc-----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhhc--
Confidence 35688999999999 887777654 368899999997521 1233445677899999999988886432
Q ss_pred hcCCCCeEEEeecccccccC----------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccc-
Q 027744 88 ESKAGGSIVFLTSIIGAERG----------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIA- 156 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~----------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~- 156 (219)
+ -.++++.||...+... ...+...|+.+|.+.+..++.+.+.. .++....++|+.+.++.....
T Consensus 123 --~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~ 197 (346)
T d1ek6a_ 123 --G-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCI 197 (346)
T ss_dssp --T-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSC
T ss_pred --C-cccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCc
Confidence 2 3579999888654211 01345679999999999998876642 468888888877766532211
Q ss_pred ------cch---HH-HHHHHHhhcC---------------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 157 ------VGQ---ER-AVKLVREAAP---------------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 157 ------~~~---~~-~~~~~~~~~~---------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
... .. .........+ .+.+...+ |+|.++..++........++++++.+|....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~-D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s 276 (346)
T d1ek6a_ 198 GEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVV-DLAKGHIAALRKLKEQCGCRIYNLGTGTGYS 276 (346)
T ss_dssp CCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH-HHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred CccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEE-eccchhhhhccccccccCceEEEeCCCCccc
Confidence 111 11 1111111111 11234444 8998887765544455678899999887654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.64 E-value=1.6e-07 Score=73.70 Aligned_cols=176 Identities=9% Similarity=-0.017 Sum_probs=115.4
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
...+..+|+.+. +.+..++ ..+|.+||.|+..... ..........+..|+.++..++.++...
T Consensus 59 ~~~~~~~D~~~~--~~~~~~~-------~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~n~~gt~~ll~~~~~~---- 121 (363)
T d2c5aa1 59 CDEFHLVDLRVM--ENCLKVT-------EGVDHVFNLAADMGGM----GFIQSNHSVIMYNNTMISFNMIEAARIN---- 121 (363)
T ss_dssp CSEEEECCTTSH--HHHHHHH-------TTCSEEEECCCCCCCH----HHHTTCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred cCcEEEeechhH--HHHHHHh-------hcCCeEeecccccccc----cccccccccccccccchhhHHHHhHHhh----
Confidence 346777888877 5544443 3689999999875221 1123446677888999999888887553
Q ss_pred CCCCeEEEeecccccccC----------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 90 KAGGSIVFLTSIIGAERG----------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~----------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+ -.++|++||...+... +..+...|+.+|.+.+.+++.+.++. |+++..++|+.+.++..
T Consensus 122 ~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~ 197 (363)
T d2c5aa1 122 G-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG 197 (363)
T ss_dssp T-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred C-ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCC
Confidence 2 3689999998765211 11345689999999999999988876 78999999999888754
Q ss_pred ccccc-----hHHHHHHHHhhcC---------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 154 PIAVG-----QERAVKLVREAAP---------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 154 ~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
..... ............+ .+.+...+ |+++++..++... .|+.+++.+|..+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~-D~~~~~~~~~~~~----~~~~~ni~~~~~~s 264 (363)
T d2c5aa1 198 TWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFID-ECVEGVLRLTKSD----FREPVNIGSDEMVS 264 (363)
T ss_dssp CCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHH-HHHHHHHHHHHSS----CCSCEEECCCCCEE
T ss_pred cccccccccccccccccccccccccccCCCCeEEEEeehh-HHHHHHHHHHhCC----CCCeEEEecCCccc
Confidence 32211 1111111111111 22244444 8999999888532 46789998887654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=98.60 E-value=2.5e-07 Score=71.50 Aligned_cols=179 Identities=15% Similarity=0.086 Sum_probs=108.4
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++.+|++|. +++.++++.. ++|++||+|+.... ....++....+++|+.|+.++++++...
T Consensus 48 ~~~~~~i~~Di~~~--~~l~~~~~~~-----~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~-- 113 (338)
T d1orra_ 48 LGNFEFVHGDIRNK--NDVTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY-- 113 (338)
T ss_dssp TCCCEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCcEEEEcccCCH--HHHHHHHHhc-----CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc--
Confidence 35688999999998 8888877754 58999999997521 1223455788999999999999887653
Q ss_pred hcCCCCeEEEeecccccccC--------------------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEE
Q 027744 88 ESKAGGSIVFLTSIIGAERG--------------------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVN 141 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~--------------------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~ 141 (219)
+ ..+.++.||..+.... +..+...|+.+|...+.+.....+.+. ....
T Consensus 114 --~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~ 187 (338)
T d1orra_ 114 --N-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTV 187 (338)
T ss_dssp --C-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEE
T ss_pred --c-ccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC---cccc
Confidence 2 3445555554432111 112457899999999999999888873 4444
Q ss_pred EeecCCccCCCCccccc----hHHHHHHHHhh----cCC---------CCCCCCchhHHHHHHHhccCCCCcccceEEEe
Q 027744 142 GIARGLHLQDEYPIAVG----QERAVKLVREA----APL---------HRWLDVKNDLASTVIYLISDGSRYMTGTTIYV 204 (219)
Q Consensus 142 ~i~pG~v~t~~~~~~~~----~~~~~~~~~~~----~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~ 204 (219)
.+.+..+..+....... ........... .++ +.+... +|++++++.++.. .....|+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v-~D~~~~~~~~l~~-~~~~~~~~~~i 265 (338)
T d1orra_ 188 VFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA-EDMISLYFTALAN-VSKIRGNAFNI 265 (338)
T ss_dssp EEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH-HHHHHHHHHHHHT-HHHHTTCEEEE
T ss_pred cccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc-cchhhHHHHHHhc-cccccCccccc
Confidence 44443333222111111 11111111111 111 112233 4899999887753 23467888888
Q ss_pred cCCc
Q 027744 205 DGAQ 208 (219)
Q Consensus 205 dgG~ 208 (219)
.+|.
T Consensus 266 ~~~~ 269 (338)
T d1orra_ 266 GGTI 269 (338)
T ss_dssp SSCG
T ss_pred cccc
Confidence 6654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=98.57 E-value=1.5e-07 Score=72.30 Aligned_cols=120 Identities=11% Similarity=0.056 Sum_probs=86.5
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|+.+. +.+..+++. ..+|.++|+|+..+. . .....+....+++|+.++.++++++... + -.+
T Consensus 37 ~~~~~~~--~~~~~~~~~-----~~~d~v~~~a~~~~~-~---~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-v~~ 100 (315)
T d1e6ua_ 37 ELNLLDS--RAVHDFFAS-----ERIDQVYLAAAKVGG-I---VANNTYPADFIYQNMMIESNIIHAAHQN----D-VNK 100 (315)
T ss_dssp TCCTTCH--HHHHHHHHH-----HCCSEEEECCCCCCC-H---HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-CCE
T ss_pred hccccCH--HHHHHHHhh-----cCCCEEEEcchhccc-c---ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-CCE
Confidence 4577777 666666553 268999999976421 1 1223445666888999999998887543 1 357
Q ss_pred EEEeecccccccC--------------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCC
Q 027744 95 IVFLTSIIGAERG--------------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEY 153 (219)
Q Consensus 95 iv~iss~~~~~~~--------------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~ 153 (219)
+|++||.+.+... +.++...|+.+|.+.+.+++.+.++. |+++.+++|+.+.+|..
T Consensus 101 ~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~ 170 (315)
T d1e6ua_ 101 LLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 170 (315)
T ss_dssp EEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred EEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 9999998875211 01223579999999999999998876 79999999999888754
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.37 E-value=3.4e-06 Score=60.68 Aligned_cols=157 Identities=14% Similarity=0.085 Sum_probs=89.6
Q ss_pred CcceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 027744 8 GQPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMK 87 (219)
Q Consensus 8 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 87 (219)
..+++++.+|++|. +++.++++ +.|++||++|......+ . +++..+..+ +++.++
T Consensus 45 ~~~~~~~~gD~~d~--~~l~~al~-------~~d~vi~~~g~~~~~~~---~---------~~~~~~~~~----l~~aa~ 99 (205)
T d1hdoa_ 45 PRPAHVVVGDVLQA--ADVDKTVA-------GQDAVIVLLGTRNDLSP---T---------TVMSEGARN----IVAAMK 99 (205)
T ss_dssp CCCSEEEESCTTSH--HHHHHHHT-------TCSEEEECCCCTTCCSC---C---------CHHHHHHHH----HHHHHH
T ss_pred ccccccccccccch--hhHHHHhc-------CCCEEEEEeccCCchhh---h---------hhhHHHHHH----HHHHHH
Confidence 35688999999998 77666654 58999999987422111 1 122223333 344445
Q ss_pred hcCCCCeEEEeecccccccCC--CCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHH
Q 027744 88 ESKAGGSIVFLTSIIGAERGL--YPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKL 165 (219)
Q Consensus 88 ~~~~~g~iv~iss~~~~~~~~--~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~ 165 (219)
+.+ -.++|++||........ .+....|...|.+.+.+. ...+++...|+||.+...........
T Consensus 100 ~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~------ 165 (205)
T d1hdoa_ 100 AHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTV------ 165 (205)
T ss_dssp HHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEE------
T ss_pred hcC-CCeEEEEeeeeccCCCccccccccccchHHHHHHHHH-------HhcCCceEEEecceecCCCCcccEEE------
Confidence 544 47899999876542210 112234555555555433 34689999999998754322211000
Q ss_pred HHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecC
Q 027744 166 VREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDG 206 (219)
Q Consensus 166 ~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 206 (219)
.........+... +|+|+.++.++.+. ...|+.+.+.+
T Consensus 166 ~~~~~~~~~~i~~-~DvA~~~~~~l~~~--~~~g~~~~~s~ 203 (205)
T d1hdoa_ 166 TLDGRGPSRVISK-HDLGHFMLRCLTTD--EYDGHSTYPSH 203 (205)
T ss_dssp ESSSCSSCSEEEH-HHHHHHHHHTTSCS--TTTTCEEEEEC
T ss_pred eeCCCCCCCcCCH-HHHHHHHHHHhCCC--CCCCEEEecCC
Confidence 0000111122333 49999999999653 34588887654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.35 E-value=2.6e-06 Score=62.51 Aligned_cols=150 Identities=14% Similarity=0.088 Sum_probs=95.4
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++....+|+.+. +++... +.+.|++||++|.. ...........+|+.++..+.+.+..
T Consensus 59 ~~i~~~~~D~~~~--~~~~~~-------~~~~d~vi~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~---- 117 (232)
T d2bkaa1 59 KNVNQEVVDFEKL--DDYASA-------FQGHDVGFCCLGTT--------RGKAGAEGFVRVDRDYVLKSAELAKA---- 117 (232)
T ss_dssp GGCEEEECCGGGG--GGGGGG-------GSSCSEEEECCCCC--------HHHHHHHHHHHHHTHHHHHHHHHHHH----
T ss_pred ceeeeeeeccccc--cccccc-------cccccccccccccc--------ccccchhhhhhhcccccceeeecccc----
Confidence 4567777888876 554433 35689999999864 23445666788899888888887643
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCe-EEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
.+ -.+++++|+..+. ......|+.+|...+...+. .+. ++..++||.+.++...............
T Consensus 118 ~~-v~~fi~~Ss~~~~----~~~~~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~- 184 (232)
T d2bkaa1 118 GG-CKHFNLLSSKGAD----KSSNFLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESRPGEWLVRKFF- 184 (232)
T ss_dssp TT-CCEEEEECCTTCC----TTCSSHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGSHHHHHHHHHH-
T ss_pred cC-ccccccCCccccc----cCccchhHHHHHHhhhcccc-------ccccceEEecCceeecCCCcCcHHHHHHHHHh-
Confidence 32 4689999998775 24456799999988865543 233 5788999999987544322111111111
Q ss_pred hhcCCC----CCCCCchhHHHHHHHhccCC
Q 027744 168 EAAPLH----RWLDVKNDLASTVIYLISDG 193 (219)
Q Consensus 168 ~~~~~~----~~~~~~~dva~~~~~l~s~~ 193 (219)
...+.. ..... +|+|++++.++...
T Consensus 185 ~~~~~~~~~~~~I~~-~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 185 GSLPDSWASGHSVPV-VTVVRAMLNNVVRP 213 (232)
T ss_dssp CSCCTTGGGGTEEEH-HHHHHHHHHHHTSC
T ss_pred hccCCcccCCCeEEH-HHHHHHHHHHHhcC
Confidence 211111 11222 59999988877543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.15 E-value=1.5e-06 Score=63.54 Aligned_cols=177 Identities=12% Similarity=-0.011 Sum_probs=99.1
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCC--------CCCcCHHHHHHHHHhhhchHHHHHH
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQD--------PLQVGEDEFKKLVKINFVAPWFLLK 80 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~ 80 (219)
.+++++.+|+++. ++..++++ .+|.+||+++....... ........+.....+|+.++..+..
T Consensus 47 ~~~~~~~~d~~~~--~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (252)
T d2q46a1 47 GEADVFIGDITDA--DSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117 (252)
T ss_dssp CCTTEEECCTTSH--HHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHH
T ss_pred CCcEEEEeeeccc--cccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecc
Confidence 4678899999998 77666543 58999999986431111 1112223345566778888777766
Q ss_pred HHHHHHHhcCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchH
Q 027744 81 AVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQE 160 (219)
Q Consensus 81 ~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~ 160 (219)
...... .+...+.++.....+. .+....+...+.....+...+.. ..|+++..++||.+.++.........
T Consensus 118 ~~~~~~-----~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~ 188 (252)
T d2q46a1 118 AAKVAG-----VKHIVVVGSMGGTNPD-HPLNKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELLV 188 (252)
T ss_dssp HHHHHT-----CSEEEEEEETTTTCTT-CGGGGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEEE
T ss_pred cccccc-----ccccccccccccCCCC-cccccccccchhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhhh
Confidence 654432 4677777776654221 22222222222333333333333 35789999999998877533211100
Q ss_pred HHHHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 161 RAVKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
..... .......+...+ |+|++++.++.. ....|+++++.++-
T Consensus 189 ~~~~~--~~~~~~~~i~~~-Dva~a~~~~l~~--~~~~g~~~~i~~~~ 231 (252)
T d2q46a1 189 GKDDE--LLQTDTKTVPRA-DVAEVCIQALLF--EEAKNKAFDLGSKP 231 (252)
T ss_dssp ESTTG--GGGSSCCEEEHH-HHHHHHHHHTTC--GGGTTEEEEEEECC
T ss_pred ccCcc--cccCCCCeEEHH-HHHHHHHHHhCC--ccccCcEEEEeeCC
Confidence 00000 001111223344 999999998854 34578999996543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=98.07 E-value=0.00012 Score=56.40 Aligned_cols=129 Identities=12% Similarity=0.070 Sum_probs=92.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++.+|++|. +.+.++++.. .+|+++|.|+.... ..+.+..+..+.+|+.++..+++++...-.
T Consensus 56 ~~i~~~~~Dl~d~--~~l~~~~~~~-----~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~- 122 (356)
T d1rkxa_ 56 DGMQSEIGDIRDQ--NKLLESIREF-----QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHVGG- 122 (356)
T ss_dssp TTSEEEECCTTCH--HHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-
T ss_pred cCCeEEEeeccCh--Hhhhhhhhhc-----hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhcccc-
Confidence 4689999999998 7877777654 68999999986421 123455677889999999999988865311
Q ss_pred cCCCCeEEEeecccccc----------cCCCCCcchhHHhHHHHHHHHHHHHHHhCC------CCeEEEEeecCCccCCC
Q 027744 89 SKAGGSIVFLTSIIGAE----------RGLYPGAAAYGACAASIHQLVRTAAMEIGK------HKIRVNGIARGLHLQDE 152 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~----------~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~------~gi~v~~i~pG~v~t~~ 152 (219)
...+++.|+..... ..+..+...|+.+|.+.+.+++.++.++.. .++.+..++|+.+.++.
T Consensus 123 ---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~ 199 (356)
T d1rkxa_ 123 ---VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 199 (356)
T ss_dssp ---CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred ---ccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence 24455555443321 111235667999999999999998887643 46889999999888765
Q ss_pred C
Q 027744 153 Y 153 (219)
Q Consensus 153 ~ 153 (219)
.
T Consensus 200 ~ 200 (356)
T d1rkxa_ 200 D 200 (356)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.83 E-value=1.3e-07 Score=67.78 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=64.0
Q ss_pred ceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhc
Q 027744 10 PVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKES 89 (219)
Q Consensus 10 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 89 (219)
++....+|+++. ++++++ ++++|+||||||+. . ..++.++|+..+++|+.+.+++...+.+.+...
T Consensus 72 ~~~~~~~d~~~~--~~~~~~-------~~~iDilin~Ag~g-~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~ 137 (191)
T d1luaa1 72 KVNVTAAETADD--ASRAEA-------VKGAHFVFTAGAIG-L----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA 137 (191)
T ss_dssp TCCCEEEECCSH--HHHHHH-------TTTCSEEEECCCTT-C----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT
T ss_pred chhhhhhhcccH--HHHHHH-------hcCcCeeeecCccc-c----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh
Confidence 455678999987 666554 46799999999963 2 347899999999999988887665543333222
Q ss_pred CCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHH
Q 027744 90 KAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVR 127 (219)
Q Consensus 90 ~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~ 127 (219)
. .....+++....... ..+...|+++|+++..|++
T Consensus 138 ~--~~~~~~~~~~~~g~~-~~g~~~y~~sk~a~~~l~~ 172 (191)
T d1luaa1 138 T--DKGKEYGGKRAFGAL-GIGGLKLKLHRACIAKLFE 172 (191)
T ss_dssp T--CEEEEETTEEEECHH-HHHHHHHHHHHHHHHHHTS
T ss_pred c--cCcEEecceEEEecc-CcCcHHHHHHHHHHHHHHh
Confidence 1 122222222221010 1223569999999887764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.40 E-value=6.2e-05 Score=53.96 Aligned_cols=126 Identities=15% Similarity=0.174 Sum_probs=79.3
Q ss_pred hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcchhH
Q 027744 37 LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAAYG 116 (219)
Q Consensus 37 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~y~ 116 (219)
.+.+|.+||++|.... ....-....++|+.++..+++++. +.+ -.+++++|+..+. ......|.
T Consensus 60 ~~~~d~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~-v~~~i~~Ss~~~~----~~~~~~y~ 123 (212)
T d2a35a1 60 DGSIDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRAL----EMG-ARHYLVVSALGAD----AKSSIFYN 123 (212)
T ss_dssp CSCCSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCC----TTCSSHHH
T ss_pred ccchheeeeeeeeecc-------ccccccccccchhhhhhhcccccc----ccc-ccccccccccccc----cccccchh
Confidence 3568999999986411 111234567888888888887763 322 4789999997765 25567899
Q ss_pred HhHHHHHHHHHHHHHHhCCCCe-EEEEeecCCccCCCCccccchHHHHHHHHhhcCCCCC-------CCCchhHHHHHHH
Q 027744 117 ACAASIHQLVRTAAMEIGKHKI-RVNGIARGLHLQDEYPIAVGQERAVKLVREAAPLHRW-------LDVKNDLASTVIY 188 (219)
Q Consensus 117 ~sK~a~~~l~~~l~~e~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~dva~~~~~ 188 (219)
.+|...+..++ ..+. +...++|+.+..+......... -..+.... ... +|+|++++.
T Consensus 124 ~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~-------~~~~~~~~~~~~~~~i~v-~DvA~ai~~ 188 (212)
T d2a35a1 124 RVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEI-------LAAPIARILPGKYHGIEA-CDLARALWR 188 (212)
T ss_dssp HHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGG-------TTCCCC----CHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHH-------HHHHHhhccCCCCcEEEH-HHHHHHHHH
Confidence 99988876554 2333 6889999999876543211100 00111110 122 499999999
Q ss_pred hccCC
Q 027744 189 LISDG 193 (219)
Q Consensus 189 l~s~~ 193 (219)
++.+.
T Consensus 189 ~~~~~ 193 (212)
T d2a35a1 189 LALEE 193 (212)
T ss_dssp HHTCC
T ss_pred HHcCC
Confidence 88653
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.35 E-value=0.0015 Score=48.18 Aligned_cols=161 Identities=16% Similarity=0.107 Sum_probs=92.9
Q ss_pred cCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEE
Q 027744 17 DMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIV 96 (219)
Q Consensus 17 Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv 96 (219)
|++|. ++++++++.. ++|++||+|+..... ......+..+..|+.....+...+... ...++
T Consensus 37 D~~d~--~~~~~~l~~~-----~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~ 98 (281)
T d1vl0a_ 37 DITNV--LAVNKFFNEK-----KPNVVINCAAHTAVD-----KCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIV 98 (281)
T ss_dssp CTTCH--HHHHHHHHHH-----CCSEEEECCCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEE
T ss_pred cCCCH--HHHHHHHHHc-----CCCEEEeeccccccc-----cccccchhhcccccccccccccccccc------ccccc
Confidence 56666 6666666543 589999999875211 122334566677776666665554432 35567
Q ss_pred Eeeccccccc---------CCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHHHHHHH
Q 027744 97 FLTSIIGAER---------GLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERAVKLVR 167 (219)
Q Consensus 97 ~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~ 167 (219)
+.||...+.. .+..+...|+.+|...+.+++. .+.+...++|+.+.++..... ........
T Consensus 99 ~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~--~~~~~~~~- 168 (281)
T d1vl0a_ 99 QISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFV--KTMINLGK- 168 (281)
T ss_dssp EEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHH--HHHHHHHH-
T ss_pred ccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccc--cchhhhhc-
Confidence 7776644311 1123566789999887766543 246788899999987754321 11111111
Q ss_pred hhcC-------CCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 168 EAAP-------LHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 168 ~~~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
...+ .+.+... +|+++++..++... .+| .+++.+|..+
T Consensus 169 ~~~~~~~~~~~~~~~i~v-~D~~~~~~~~~~~~---~~g-~~~~~~~~~~ 213 (281)
T d1vl0a_ 169 THDELKVVHDQVGTPTST-VDLARVVLKVIDEK---NYG-TFHCTCKGIC 213 (281)
T ss_dssp HCSEEEEESSCEECCEEH-HHHHHHHHHHHHHT---CCE-EEECCCBSCE
T ss_pred cCCceeecCCceeccchh-hhhhhhhhhhhhhc---ccC-ceeEeCCCcc
Confidence 1111 1122333 49999999988543 234 6776666544
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=97.30 E-value=0.00026 Score=52.81 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=64.0
Q ss_pred EecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCe
Q 027744 15 GLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGS 94 (219)
Q Consensus 15 ~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ 94 (219)
.+|++|. +.++++++.. ++|+|||+||...... ..+.-...+.+|+.++..+..++. +. +.+
T Consensus 37 ~~Dl~~~--~~~~~~i~~~-----~~D~Vih~Aa~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~~ 98 (298)
T d1n2sa_ 37 CGDFSNP--KGVAETVRKL-----RPDVIVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAAN----ET--GAW 98 (298)
T ss_dssp CCCTTCH--HHHHHHHHHH-----CCSEEEECCCCCCHHH-----HTTCHHHHHHHHTHHHHHHHHHHT----TT--TCE
T ss_pred cCcCCCH--HHHHHHHHHc-----CCCEEEEecccccccc-----cccCccccccccccccccchhhhh----cc--ccc
Confidence 4688888 7777777654 5899999999752211 122335667888888888877763 22 467
Q ss_pred EEEeeccccccc---------CCCCCcchhHHhHHHHHHHHHH
Q 027744 95 IVFLTSIIGAER---------GLYPGAAAYGACAASIHQLVRT 128 (219)
Q Consensus 95 iv~iss~~~~~~---------~~~~~~~~y~~sK~a~~~l~~~ 128 (219)
++++||...+.. .+..+...|+.+|.+.+.+.+.
T Consensus 99 ~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 99 VVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp EEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence 888888765411 1123557899999988876654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.012 Score=43.45 Aligned_cols=164 Identities=12% Similarity=0.079 Sum_probs=93.3
Q ss_pred HHHHHHHHHH--hCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeeccccc
Q 027744 27 DEAVDKACQI--LGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGA 104 (219)
Q Consensus 27 ~~~~~~~~~~--~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~ 104 (219)
.......... +..+++++|.|+..... .. ..+...+.|+.+...++.++... +-++++.||....
T Consensus 54 ~~~~~~~~~~~~~~~~~~i~~~aa~~~~~----~~---~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~ 120 (307)
T d1eq2a_ 54 EDFLIQIMAGEEFGDVEAIFHEGACSSTT----EW---DGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATY 120 (307)
T ss_dssp HHHHHHHHTTCCCSSCCEEEECCSCCCTT----CC---CHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGG
T ss_pred hHHHHHHhhhhcccchhhhhhhccccccc----cc---ccccccccccccccccccccccc------ccccccccccccc
Confidence 3444444332 35688999998864211 11 23445666777777777665433 2346666665544
Q ss_pred ccC---------CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccc----hHHHHHHHHhh--
Q 027744 105 ERG---------LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVG----QERAVKLVREA-- 169 (219)
Q Consensus 105 ~~~---------~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~-- 169 (219)
... +..+...|+.+|.+.+.+++.+.++ .++.+..++|..+..+....... ...........
T Consensus 121 ~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~ 197 (307)
T d1eq2a_ 121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGES 197 (307)
T ss_dssp TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---
T ss_pred ccccccccccccccccccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccc
Confidence 111 1235678999999999999987765 46788888988888775432211 01111111111
Q ss_pred --------cCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCcccc
Q 027744 170 --------APLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSIT 211 (219)
Q Consensus 170 --------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~~ 211 (219)
...+.+... +|+++++..++... ....+++.+|...+
T Consensus 198 ~~~~~g~~~~~r~~~~v-~d~~~~~~~~~~~~----~~~~~~~~~~~~~s 242 (307)
T d1eq2a_ 198 PKLFEGSENFKRDFVYV-GDVADVNLWFLENG----VSGIFNLGTGRAES 242 (307)
T ss_dssp ----------CBCEEEH-HHHHHHHHHHHHHC----CCEEEEESCSCCBC
T ss_pred eeeecCccceeeeeeec-ccHHHHHHHHhhhc----cccccccccccchh
Confidence 111122333 38899888877542 24578888776554
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=95.38 E-value=0.03 Score=41.29 Aligned_cols=105 Identities=8% Similarity=0.030 Sum_probs=57.9
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|+.|. +++.+.++ +.+.++++++.... ..|..+...++.++ .+
T Consensus 54 ~~v~~v~~d~~d~--~~~~~~~~-------~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a----~~ 104 (312)
T d1qyda_ 54 LGAKLIEASLDDH--QRLVDALK-------QVDVVISALAGGVL----------------SHHILEQLKLVEAI----KE 104 (312)
T ss_dssp TTCEEECCCSSCH--HHHHHHHT-------TCSEEEECCCCSSS----------------STTTTTHHHHHHHH----HH
T ss_pred CCcEEEEeecccc--hhhhhhcc-------Ccchhhhhhhhccc----------------ccchhhhhHHHHHH----HH
Confidence 4588999999998 66655543 57899998875311 12333444444443 22
Q ss_pred cCCCCeEEEeecccccccC---CCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccC
Q 027744 89 SKAGGSIVFLTSIIGAERG---LYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQ 150 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~---~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t 150 (219)
.. ..++++.||....... +..+...|...|...+. +.+ ..++....++|+.+..
T Consensus 105 ~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 105 AG-NIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRR----AIE---AASIPYTYVSSNMFAG 161 (312)
T ss_dssp SC-CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHH----HHH---HTTCCBCEEECCEEHH
T ss_pred hc-CCcEEEEeeccccCCCcccccchhhhhhHHHHHHHH----hhc---ccccceEEeccceeec
Confidence 22 4567777765443111 11223344444444433 222 2467788888877654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=95.20 E-value=0.024 Score=43.05 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=84.0
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
.++.++++|+.|. .+.. + ..+...|.++++.... .. . ++.....++.++ ++
T Consensus 49 ~~v~~~~gD~~d~--~~~~---~---~a~~~~~~~~~~~~~~-~~------~----------~~~~~~~~~~aa----~~ 99 (350)
T d1xgka_ 49 PNVTLFQGPLLNN--VPLM---D---TLFEGAHLAFINTTSQ-AG------D----------EIAIGKDLADAA----KR 99 (350)
T ss_dssp TTEEEEESCCTTC--HHHH---H---HHHTTCSEEEECCCST-TS------C----------HHHHHHHHHHHH----HH
T ss_pred CCCEEEEeeCCCc--HHHH---H---HHhcCCceEEeecccc-cc------h----------hhhhhhHHHHHH----HH
Confidence 4688999999997 4422 2 2245678887775432 10 1 122223334433 33
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccch----HHHHH
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQ----ERAVK 164 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~----~~~~~ 164 (219)
.+ ..++++.||..............|..+|...+...+ ..++....++|+............. .....
T Consensus 100 ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~ 171 (350)
T d1xgka_ 100 AG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDG 171 (350)
T ss_dssp HS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTS
T ss_pred hC-CCceEEEeeccccccCCcccchhhhhhHHHHHHHHH-------hhccCceeeeeceeeccccccccccccccccccc
Confidence 33 356777887665433223444566777776655443 2357778888876544322111100 00000
Q ss_pred HHHhhcCCC-C----CCCCchhHHHHHHHhccCCCCcccceEEEecCCc
Q 027744 165 LVREAAPLH-R----WLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQ 208 (219)
Q Consensus 165 ~~~~~~~~~-~----~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~ 208 (219)
......+.. . +....+|+++++..++.+......|+++.+.|..
T Consensus 172 ~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~ 220 (350)
T d1xgka_ 172 TFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET 220 (350)
T ss_dssp CEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEE
T ss_pred cceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCc
Confidence 000001110 0 1122248999998888654445679999997653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=89.95 E-value=0.11 Score=37.81 Aligned_cols=161 Identities=13% Similarity=0.082 Sum_probs=76.3
Q ss_pred cceEEEEecCCccchhHHHHHHHHHHHHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHh
Q 027744 9 QPVEVVGLDMEEDREGAFDEAVDKACQILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKE 88 (219)
Q Consensus 9 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~ 88 (219)
..+.++.+|+.+. .+....++ ..+.++|+++.. +..+...+.+++. .
T Consensus 55 ~~~~~~~~d~~~~--~~~~~~~~-------~~~~vi~~~~~~--------------------~~~~~~~~~~a~~----~ 101 (307)
T d1qyca_ 55 SGANIVHGSIDDH--ASLVEAVK-------NVDVVISTVGSL--------------------QIESQVNIIKAIK----E 101 (307)
T ss_dssp TTCEEECCCTTCH--HHHHHHHH-------TCSEEEECCCGG--------------------GSGGGHHHHHHHH----H
T ss_pred CCcEEEEeecccc--hhhhhhhh-------hceeeeeccccc--------------------ccchhhHHHHHHH----H
Confidence 3577888999887 55555443 478999988753 1122233333332 2
Q ss_pred cCCCCeEEEeecccccccCCCCCcchhHHhHHHHHHHHHHHHHHhCCCCeEEEEeecCCccCCCCccccchHHH------
Q 027744 89 SKAGGSIVFLTSIIGAERGLYPGAAAYGACAASIHQLVRTAAMEIGKHKIRVNGIARGLHLQDEYPIAVGQERA------ 162 (219)
Q Consensus 89 ~~~~g~iv~iss~~~~~~~~~~~~~~y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~------ 162 (219)
.. ..++++.|+.... .. ......+...+.........+..+ .++....++|+.+..+...........
T Consensus 102 ~~-~~~~~~~s~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~ 175 (307)
T d1qyca_ 102 VG-TVKRFFPSEFGND-VD-NVHAVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDK 175 (307)
T ss_dssp HC-CCSEEECSCCSSC-TT-SCCCCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSE
T ss_pred hc-cccceeeeccccc-cc-cccccccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhccc
Confidence 22 3556666665432 21 222233333333333333333333 367788899987765322111000000
Q ss_pred HHHHHhhcCCCCCCCCchhHHHHHHHhccCCCCcccceEEEecCCccc
Q 027744 163 VKLVREAAPLHRWLDVKNDLASTVIYLISDGSRYMTGTTIYVDGAQSI 210 (219)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgG~~~ 210 (219)
............+... +|+|++++.++.... ..++...++.+|..+
T Consensus 176 ~~~~~~~~~~~~~i~v-~Dva~~~~~~l~~~~-~~~~~~~~~~~~~~~ 221 (307)
T d1qyca_ 176 VVILGDGNARVVFVKE-EDIGTFTIKAVDDPR-TLNKTLYLRLPANTL 221 (307)
T ss_dssp EEEETTSCCEEEEECH-HHHHHHHHTTSSCGG-GTTEEEECCCGGGEE
T ss_pred ceeeecccccccCCcH-HHHHHHHHHHhcChh-hcCceeEEeCCCCcc
Confidence 0000000011112333 499999999886432 223333444555543
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| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=84.42 E-value=4.4 Score=27.42 Aligned_cols=95 Identities=12% Similarity=0.079 Sum_probs=53.2
Q ss_pred HHhCCCcEEEeccccCCCCCCCCCcCHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCCCeEEEeecccccccCCCCCcch
Q 027744 35 QILGNLDAFVHCYTYEGKMQDPLQVGEDEFKKLVKINFVAPWFLLKAVGRRMKESKAGGSIVFLTSIIGAERGLYPGAAA 114 (219)
Q Consensus 35 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~iv~iss~~~~~~~~~~~~~~ 114 (219)
...+.++.+||..+........... ....+...+.++|.+. +.+...++.+++..... . ......
T Consensus 73 ~~~~~~~~vv~l~~~~~~~~~~~~~--------~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~-~--~~~d~~ 137 (209)
T d2fr1a2 73 RSVGEVAGVLSLLAVDEAEPEEAPL--------ALASLADTLSLVQAMV----SAELGCPLWTVTESAVA-T--GPFERV 137 (209)
T ss_dssp TTSCCCSEEEECTTTTCCCCSSCGG--------GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSC-S--STTSCC
T ss_pred hccCCCCeEEEeCCCCCCCCcchhH--------HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCcc-c--CCCccc
Confidence 3446789999987653211111111 0111333445555543 22224667777764432 1 123334
Q ss_pred hHHhHHHHHHHHHHHHHHhCCCCeEEEEee
Q 027744 115 YGACAASIHQLVRTAAMEIGKHKIRVNGIA 144 (219)
Q Consensus 115 y~~sK~a~~~l~~~l~~e~~~~gi~v~~i~ 144 (219)
-+..++++.+|+|+++.|+....++...+.
T Consensus 138 ~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~ 167 (209)
T d2fr1a2 138 RNAAHGALWGVGRVIALENPAVWGGLVDVP 167 (209)
T ss_dssp SCGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred CCHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence 456789999999999999987556665553
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