Your job contains 1 sequence.
>027747
MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ
LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP
DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE
VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027747
(219 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173043 - symbol:CRR1 "chlororespiration reduc... 933 1.0e-93 1
TIGR_CMR|CBU_1709 - symbol:CBU_1709 "dihydrodipicolinate ... 299 1.5e-26 1
TIGR_CMR|DET_0971 - symbol:DET_0971 "dihydrodipicolinate ... 268 2.9e-23 1
UNIPROTKB|P63895 - symbol:dapB "4-hydroxy-tetrahydrodipic... 260 2.1e-22 1
TIGR_CMR|CHY_1151 - symbol:CHY_1151 "dihydrodipicolinate ... 255 7.0e-22 1
TIGR_CMR|BA_1555 - symbol:BA_1555 "dihydrodipicolinate re... 224 1.4e-18 1
UNIPROTKB|P72024 - symbol:dapB "4-hydroxy-tetrahydrodipic... 222 2.2e-18 1
>TAIR|locus:2173043 [details] [associations]
symbol:CRR1 "chlororespiration reduction 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008839 "4-hydroxy-tetrahydrodipicolinate
reductase" evidence=IEA;IGI;ISS] [GO:0009089 "lysine biosynthetic
process via diaminopimelate" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0070402 "NADPH binding" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0019684
"photosynthesis, light reaction" evidence=IMP] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173
PIRSF:PIRSF000161 UniPathway:UPA00034 InterPro:IPR016040
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
Gene3D:3.40.50.720 GO:GO:0016491 GO:GO:0070402 GO:GO:0009089
GO:GO:0019877 EMBL:AB015478 eggNOG:COG0289 KO:K00215
PANTHER:PTHR20836 EMBL:AY084406 EMBL:BT030092 IPI:IPI00522022
RefSeq:NP_200023.1 UniGene:At.29638 HSSP:P72024
ProteinModelPortal:Q9FJ82 SMR:Q9FJ82 STRING:Q9FJ82 PaxDb:Q9FJ82
PRIDE:Q9FJ82 EnsemblPlants:AT5G52100.1 GeneID:835286
KEGG:ath:AT5G52100 TAIR:At5g52100 HOGENOM:HOG000227154
InParanoid:Q9FJ82 OMA:IHVHAVR PhylomeDB:Q9FJ82
ProtClustDB:CLSN2687455 Genevestigator:Q9FJ82 GO:GO:0019684
TIGRFAMs:TIGR00036 Uniprot:Q9FJ82
Length = 298
Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
Identities = 183/219 (83%), Positives = 200/219 (91%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ 60
ME+PLEIPV+SDLTMVLGSISQ K VVIDFTD STVY+NVKQATAFGM+SVVYVP I+
Sbjct: 80 MEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQATAFGMKSVVYVPRIK 139
Query: 61 LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 120
ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NVE+VESRPNA D PSP
Sbjct: 140 PETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNVELVESRPNAADLPSP 199
Query: 121 DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGVRVHSMVLPGLPSST VYFS PG+
Sbjct: 200 EAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGVRVHSMVLPGLPSSTQVYFSSPGD 259
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEKFL
Sbjct: 260 VYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEKFL 298
>TIGR_CMR|CBU_1709 [details] [associations]
symbol:CBU_1709 "dihydrodipicolinate reductase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154 OMA:IHVHAVR
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 EMBL:M74242 PIR:B44791
RefSeq:NP_820690.1 ProteinModelPortal:P24703 PRIDE:P24703
GeneID:1209620 KEGG:cbu:CBU_1709 PATRIC:17932153
BioCyc:CBUR227377:GJ7S-1681-MONOMER Uniprot:P24703
Length = 239
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 75/222 (33%), Positives = 120/222 (54%)
Query: 7 IPVMSDLTMVLGSISQSK-ARA-------VVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q A+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>TIGR_CMR|DET_0971 [details] [associations]
symbol:DET_0971 "dihydrodipicolinate reductase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 OMA:RLHSVRL
RefSeq:YP_181694.1 ProteinModelPortal:Q3Z7V5 STRING:Q3Z7V5
GeneID:3229677 KEGG:det:DET0971 PATRIC:21608991
BioCyc:DETH243164:GJNF-972-MONOMER Uniprot:Q3Z7V5
Length = 263
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 69/216 (31%), Positives = 112/216 (51%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IP +DL+ VL SQ+K V++DFT A ++ A A + V+ E +S
Sbjct: 53 IPYSADLSSVL---SQTKPD-VMVDFTIAKASMPAIRIAAAHKVNLVIGTTGFSPEEISE 108
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSPDATQIA 126
+ +G ++AP ++G+I++ A AS + E++E + + SP T +A
Sbjct: 109 IEQLAKTNDIGIIVAPNFALGAIIMVHLAQEASRFLASAEVIELHHDKK-LDSPSGTALA 167
Query: 127 NNLSNL---GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYS 183
+ L G+ +N+ ARGQ DG+RVHS+ LPGL + V F G+ +
Sbjct: 168 TAAAMLKTRGEAFNKPAKENMSDARGQE--HDGIRVHSVRLPGLLAHQEVIFGAAGQSLT 225
Query: 184 IKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
I+HD + MPG++LAI+++V K V+GL+K L
Sbjct: 226 IRHDAFSRECYMPGVVLAIKEIVQTKGFVFGLDKLL 261
>UNIPROTKB|P63895 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 PIR:A95181 RefSeq:NP_346002.1
ProteinModelPortal:P63895 EnsemblBacteria:EBSTRT00000026496
GeneID:931285 KEGG:spn:SP_1555 PATRIC:19707539 Uniprot:P63895
Length = 255
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 72/217 (33%), Positives = 108/217 (49%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVY 182
A ++ + + + ++ ARG DG+R+HS+ LPGL + V F GE
Sbjct: 161 AELMAEVRESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGNQGEGL 218
Query: 183 SIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+++HD D S M G+ L I++VV LVYGLE L
Sbjct: 219 TLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>TIGR_CMR|CHY_1151 [details] [associations]
symbol:CHY_1151 "dihydrodipicolinate reductase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=ISS] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:YP_359996.1
ProteinModelPortal:Q3ACY8 STRING:Q3ACY8 GeneID:3727402
KEGG:chy:CHY_1151 PATRIC:21275442 OMA:RLHSVRL
BioCyc:CHYD246194:GJCN-1150-MONOMER Uniprot:Q3ACY8
Length = 263
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 61/195 (31%), Positives = 109/195 (55%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
+V+DF+ AS + N+ A +R V E + + + ++GC+IAP SIG
Sbjct: 70 IVLDFSRASGAFTNILIALENKVRVVSGTTGFSQEQIKKIEDVSNANNLGCIIAPNFSIG 129
Query: 88 SILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNRED-ISTDV 145
++LL + A A+ ++ +VEI+E N + D PS A + A LS++ + N+ I +
Sbjct: 130 ALLLMKLAQMAAKYFSHVEIIEYHHNLKVDAPSGTAIKTAELLSSIRE--NQPSAIQEEE 187
Query: 146 KARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIRK 204
K G G+ G+++HS+ LPGL + V F G+ +++HD+ +S + G++ A++K
Sbjct: 188 KIPGSRGGDYRGIKIHSVRLPGLVAHQEVIFGGRGQSLTLRHDVYSRESYLDGILFALKK 247
Query: 205 VVHLKNLVYGLEKFL 219
V+ L V+GL++ L
Sbjct: 248 VLELDRFVFGLDELL 262
>TIGR_CMR|BA_1555 [details] [associations]
symbol:BA_1555 "dihydrodipicolinate reductase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:NP_844005.1
RefSeq:YP_018177.1 RefSeq:YP_027711.1 ProteinModelPortal:Q81SU0
DNASU:1086847 EnsemblBacteria:EBBACT00000009988
EnsemblBacteria:EBBACT00000018736 EnsemblBacteria:EBBACT00000020843
GeneID:1086847 GeneID:2815987 GeneID:2851184 KEGG:ban:BA_1555
KEGG:bar:GBAA_1555 KEGG:bat:BAS1442 OMA:IVMAPNM
ProtClustDB:PRK00048 BioCyc:BANT260799:GJAJ-1516-MONOMER
BioCyc:BANT261594:GJ7F-1579-MONOMER Uniprot:Q81SU0
Length = 266
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 63/220 (28%), Positives = 114/220 (51%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L+ + +DL L + V++D T +V A G+RSV+ E +
Sbjct: 53 LDATIYADLHTCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEEL 108
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
L+ + ++G +IAP +IG++L+ + + A+ ++++VE++E + + D PS A
Sbjct: 109 KQLTETAKEKAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIELHHDQKLDAPSGTAV 168
Query: 124 Q----IANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ I N + Q + E + ARG + DG+ +HS+ LPGL + V F G
Sbjct: 169 KTVELIRQNRESKQQGHPNE-VEQLEGARGANV--DGIHIHSVRLPGLIAHQEVMFGGDG 225
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
++ +++HD + S M G+ L+I V++L +LVYGLE +
Sbjct: 226 QMLTVRHDSFNRASFMSGVKLSIETVMNLDHLVYGLENII 265
>UNIPROTKB|P72024 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=IDA] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=IDA] [GO:0019877 "diaminopimelate
biosynthetic process" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051289 "protein
homotetramerization" evidence=IPI] [GO:0070402 "NADPH binding"
evidence=IDA] [GO:0070404 "NADH binding" evidence=IDA]
HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005886 GO:GO:0005737
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 Gene3D:3.40.50.720
GO:GO:0051289 GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
GO:GO:0070404 eggNOG:COG0289 KO:K00215 GO:GO:0008839
PANTHER:PTHR20836 HOGENOM:HOG000227154 TIGRFAMs:TIGR00036
OMA:IVMAPNM ProtClustDB:PRK00048 EMBL:U66101 PIR:D70882
RefSeq:NP_217289.1 RefSeq:NP_337348.1 RefSeq:YP_006516219.1
PDB:1C3V PDB:1P9L PDB:1YL5 PDB:1YL6 PDB:1YL7 PDBsum:1C3V
PDBsum:1P9L PDBsum:1YL5 PDBsum:1YL6 PDBsum:1YL7
ProteinModelPortal:P72024 SMR:P72024 PRIDE:P72024
EnsemblBacteria:EBMYCT00000002217 EnsemblBacteria:EBMYCT00000071917
GeneID:13317558 GeneID:888443 GeneID:925445 KEGG:mtc:MT2843
KEGG:mtu:Rv2773c KEGG:mtv:RVBD_2773c PATRIC:18128004
TubercuList:Rv2773c EvolutionaryTrace:P72024 Uniprot:P72024
Length = 245
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 63/197 (31%), Positives = 98/197 (49%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFC-DKASMGCLIAPTLSI 86
VVIDFT V N++ G+ +VV E + ++ K + LIAP +I
Sbjct: 48 VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAI 107
Query: 87 GSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL--GQIYNREDIST 143
G++L A A+ + + E++E P+ D PS A + A ++ G N + ST
Sbjct: 108 GAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATST 167
Query: 144 DVK-ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAI 202
+ ARG + DG+ VH++ L GL + V F GE +I+HD D S +PG++LA+
Sbjct: 168 SLPGARGADV--DGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAV 225
Query: 203 RKVVHLKNLVYGLEKFL 219
R++ L GLE L
Sbjct: 226 RRIAERPGLTVGLEPLL 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 219 219 0.00092 112 3 11 22 0.37 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 556 (59 KB)
Total size of DFA: 139 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.17u 0.09s 18.26t Elapsed: 00:00:00
Total cpu time: 18.17u 0.09s 18.26t Elapsed: 00:00:00
Start: Sat May 11 07:46:30 2013 End: Sat May 11 07:46:30 2013