BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027747
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJ82|DAPB3_ARATH Putative 4-hydroxy-tetrahydrodipicolinate reductase 3,
chloroplastic OS=Arabidopsis thaliana GN=DAPB3 PE=2 SV=1
Length = 298
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/219 (83%), Positives = 200/219 (91%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ 60
ME+PLEIPV+SDLTMVLGSISQ K VVIDFTD STVY+NVKQATAFGM+SVVYVP I+
Sbjct: 80 MEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQATAFGMKSVVYVPRIK 139
Query: 61 LETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARDFPSP 120
ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NVE+VESRPNA D PSP
Sbjct: 140 PETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNVELVESRPNAADLPSP 199
Query: 121 DATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+A QIANN+SNLGQIYNRED STDV+ARGQV+GEDGVRVHSMVLPGLPSST VYFS PG+
Sbjct: 200 EAIQIANNISNLGQIYNREDSSTDVQARGQVIGEDGVRVHSMVLPGLPSSTQVYFSSPGD 259
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
VY++KHDI DV+SLMPGL+LAIRKVV LKNLVYGLEKFL
Sbjct: 260 VYTVKHDIIDVRSLMPGLLLAIRKVVRLKNLVYGLEKFL 298
>sp|B8HRK9|DAPB_CYAP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=dapB PE=3 SV=1
Length = 275
Score = 197 bits (501), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 145/220 (65%), Gaps = 5/220 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
PLE+P+++DL +L + +Q V++DFT ++VYDNV+ A A+G+R VV + E
Sbjct: 57 PLEVPLLADLQSLLVAAAQEPQAGVMVDFTHPNSVYDNVRMAIAYGVRPVVGTTGLSPEQ 116
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L+ F DKASMGCLI P SIG +LLQQAAI AS ++ +VEI+E N + D PS A
Sbjct: 117 IRDLATFADKASMGCLIIPNFSIGMVLLQQAAIQASQYFDHVEIIELHHNQKADAPSGTA 176
Query: 123 TQIANNLSNLGQIYNREDISTD---VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
Q A L+ LG+ YN + ARG L E+G+R+HS+ LPGL + V F PG
Sbjct: 177 LQTAQLLAELGKTYNPPAVKETEHLAGARGS-LAEEGIRIHSVRLPGLIAHQEVIFGAPG 235
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+VY+++HD +D MPG++LAIRKV++L+ +VYGLEK L
Sbjct: 236 QVYTLRHDTSDRSCYMPGVLLAIRKVMNLETVVYGLEKIL 275
>sp|Q10YI1|DAPB_TRIEI 4-hydroxy-tetrahydrodipicolinate reductase OS=Trichodesmium
erythraeum (strain IMS101) GN=dapB PE=3 SV=1
Length = 275
Score = 197 bits (500), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 144/220 (65%), Gaps = 5/220 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
PLE+P+++DL +L +Q K AV++DFT +VY+NV+ A A+G+R VV + E
Sbjct: 57 PLEVPILNDLQGILVMAAQEKQPAVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLSQEQ 116
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L+ F +KAS+G LI P SIG +LLQQAAI+AS H+ +VEI+E N + D PS A
Sbjct: 117 IQDLAEFAEKASIGTLIIPNFSIGMVLLQQAAIAASKHFDHVEIIELHHNQKADAPSGTA 176
Query: 123 TQIANNLSNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A LS LG+ YN ++ K ARG L E+G+R+HS+ LPGL + V F PG
Sbjct: 177 IKTAQMLSELGKTYNVPNVEETEKIEGARG-CLAEEGIRIHSVRLPGLIAHQEVIFGGPG 235
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
++Y+++HD TD MPG++LAIRKV L L+YGLEK L
Sbjct: 236 QIYTLRHDTTDRSCYMPGVLLAIRKVQSLTKLIYGLEKIL 275
>sp|B7KBV6|DAPB_CYAP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7424) GN=dapB PE=3 SV=1
Length = 275
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 136/219 (62%), Gaps = 3/219 (1%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
P+E+P++ DL VL +Q K + V++DFT VYDN++ A A+G+R VV + E
Sbjct: 57 PVEVPILDDLQSVLVLATQEKVQGVMVDFTHPDGVYDNIRSAIAYGVRPVVGTTGLSGEQ 116
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L F +KAS GCLI P SIG ILLQQAA+ AS ++ +VEI+E N + D PS A
Sbjct: 117 IKDLGEFAEKASTGCLIVPNFSIGMILLQQAAVQASQYFDHVEIIELHHNQKADAPSGTA 176
Query: 123 TQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A LS LG+ +N + RG G E+ + +HS+ LPG + V F G+
Sbjct: 177 IKTAEMLSELGKSFNPAKVEETETIRGSRGGITEENIHIHSVRLPGFIAHQEVIFGSTGQ 236
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+Y+++HD TD S MPG++LAIRKV LK+L+YGLEK L
Sbjct: 237 IYTLRHDTTDRSSFMPGVLLAIRKVTQLKSLIYGLEKIL 275
>sp|Q8YU19|DAPB_NOSS1 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=dapB PE=3 SV=1
Length = 278
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 145/225 (64%), Gaps = 7/225 (3%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
+ +PLE+P+ + L +LG ++ + V++DFT +VYDNV+ A A+G+R VV
Sbjct: 55 LSEPLEVPITNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTG 114
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ + L+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + D
Sbjct: 115 LSPAQIQNLADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADA 174
Query: 118 PSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVY 174
PS A Q A L+ LG+ +N E+ ARG L E+G+R+HS+ LPGL + V
Sbjct: 175 PSGTAIQTAELLAELGKTFNSAIVEETEKIPGARGS-LAEEGIRIHSVRLPGLIAHQEVI 233
Query: 175 FSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
F PG++Y+++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 234 FGAPGQIYTLRHDTSDRACYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|Q3MFY8|DAPB_ANAVT 4-hydroxy-tetrahydrodipicolinate reductase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=dapB PE=3 SV=1
Length = 278
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 145/225 (64%), Gaps = 7/225 (3%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
+ +PLE+P+ + L +LG ++ + V++DFT +VYDNV+ A A+G+R VV
Sbjct: 55 LSEPLEVPITNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTG 114
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ + L+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + D
Sbjct: 115 LSPAQIQNLADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADA 174
Query: 118 PSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVY 174
PS A Q A L+ LG+ +N E+ ARG + GE G+R+HS+ LPGL + V
Sbjct: 175 PSGTAIQTAELLAELGKTFNSAIVEETEKIPGARGSLAGE-GIRIHSVRLPGLIAHQEVI 233
Query: 175 FSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
F PG++Y+++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 234 FGAPGQIYTLRHDTSDRACYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|P72642|DAPB_SYNY3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=dapB PE=3 SV=1
Length = 275
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 140/220 (63%), Gaps = 5/220 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
PLE+PV++DL VL +Q K + V++DFT S VYDNV+ A A+G+R VV + +
Sbjct: 57 PLEVPVLADLQSVLVLATQEKIQGVMVDFTHPSGVYDNVRSAIAYGVRPVVGTTGLSEQQ 116
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L F +KAS GCLIAP +IG +L+QQAA+ A ++ +VEI+E N + D PS A
Sbjct: 117 IQDLGDFAEKASTGCLIAPNFAIGVLLMQQAAVQACQYFDHVEIIELHHNQKADAPSGTA 176
Query: 123 TQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A L+ +G+ +N E+ T A+G LG + +HS+ LPGL + V F PG
Sbjct: 177 IKTAQMLAEMGKTFNPPAVEEKETIAGAKGG-LGPGQIPIHSIRLPGLIAHQEVLFGSPG 235
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
++Y+I+HD TD MPG++L IRKVV LK LVYGLEK L
Sbjct: 236 QLYTIRHDTTDRACYMPGVLLGIRKVVELKGLVYGLEKLL 275
>sp|Q9S3W8|DAPB_MASLA 4-hydroxy-tetrahydrodipicolinate reductase OS=Mastigocladus
laminosus GN=dapB PE=3 SV=1
Length = 278
Score = 186 bits (473), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 144/225 (64%), Gaps = 7/225 (3%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
+ +P E+P+ L +L ++ + V++DFT VYDNV+ A A+G+R VV
Sbjct: 55 LNEPTEVPITDQLEPILAYVAGERHLQPGVMVDFTHPDAVYDNVRSAIAYGIRPVVGTTG 114
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ + + L+ F +KAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + D
Sbjct: 115 LSSKQIEQLADFAEKASTGCLIIPNFSIGMVLLQQAAIAASQYFDHVEIIELHHNQKADA 174
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVY 174
PS A Q A L+ +G+ +N+ + K ARG + GE G+R+HS+ LPGL + V
Sbjct: 175 PSGTAIQTAQMLAEMGKTFNQPAVKETEKLPGARGSLAGE-GIRIHSVRLPGLIAHQEVI 233
Query: 175 FSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
F PG++Y+++HD +D + MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 234 FGAPGQIYTLRHDTSDRTAYMPGVLLAIRKVLQLKSLVYGLEKIL 278
>sp|B2J0A9|DAPB_NOSP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=dapB PE=3 SV=1
Length = 278
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 144/225 (64%), Gaps = 7/225 (3%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
+ +PLE+P+ + L +LG ++ + V++DFT +VYDN++ A A+G+R VV
Sbjct: 55 LSEPLEVPITNQLEPMLGYVAGDRQSPPGVIVDFTHPDSVYDNIRSAIAYGIRPVVGTTG 114
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ E + L+ F DKAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + D
Sbjct: 115 LSPEQIQDLADFADKASTGCLIIPNFSIGMVLLQQAAIAASKYFDHVEIIELHHNQKADA 174
Query: 118 PSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVY 174
PS A Q A L LG+ +N E+ ARG + ++G+R+HS+ LPGL + V
Sbjct: 175 PSGTAIQTAQLLGELGKTFNPALVEETEKLPGARGSI-ADEGIRIHSVRLPGLIAHQEVI 233
Query: 175 FSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
F G++Y+++HD +D MPG++LAIRKV+ LK+LVYGLEK L
Sbjct: 234 FGAAGQIYTLRHDTSDRACYMPGVLLAIRKVLALKSLVYGLEKIL 278
>sp|B7JW41|DAPB_CYAP8 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 8801) GN=dapB PE=3 SV=1
Length = 275
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
LE+P++ DL +L +Q K + V++DFT +VY+NV+ A A+G+R VV + E +
Sbjct: 58 LEVPIVDDLQSILVLATQEKIQGVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLTEEQL 117
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
L+ F DKAS GCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + D PS A
Sbjct: 118 KDLADFADKASTGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAI 177
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A LS LG+ YN ++ T A+G ++ +D +R+HS+ LPGL + V F GE
Sbjct: 178 KTAQMLSGLGKTYNPPMVKETETIAGAKGALV-DDNIRIHSVRLPGLIAHQEVIFGAKGE 236
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+Y+++HD +D M G++L+IRKV L++LVYGLEK L
Sbjct: 237 IYTLRHDTSDRSCYMAGVLLSIRKVTQLQSLVYGLEKIL 275
>sp|Q31LA3|DAPB_SYNE7 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus
elongatus (strain PCC 7942) GN=dapB PE=3 SV=1
Length = 273
Score = 177 bits (449), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E
Sbjct: 55 PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQ 114
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A
Sbjct: 115 LQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTA 174
Query: 123 TQIANNLSNLGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A L+ LG+ +N ++ T ARG V G + +R+HS+ LPGL + V F PG
Sbjct: 175 IKTAQMLAELGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGLIAHEEVIFGAPG 233
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
E+ +++HD D MPG++LA+RKV L L+YGL++ L
Sbjct: 234 EILTLRHDTMDRSCYMPGVLLAVRKVRQLTGLIYGLDRIL 273
>sp|Q5N0M4|DAPB_SYNP6 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapB
PE=3 SV=1
Length = 273
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 136/219 (62%), Gaps = 5/219 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E
Sbjct: 55 PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQ 114
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A
Sbjct: 115 LQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTA 174
Query: 123 TQIANNLSNLGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A L+ LG+ +N ++ T ARG V G + +R+HS+ LPGL + V F PG
Sbjct: 175 IKTAQMLAELGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGLIAHEEVIFGAPG 233
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKF 218
E+ +++HD D MPG++LA+RKV L L+YGL++
Sbjct: 234 EILTLRHDTMDRSCYMPGVLLAVRKVRQLTGLIYGLDRI 272
>sp|B0CE31|DAPB_ACAM1 4-hydroxy-tetrahydrodipicolinate reductase OS=Acaryochloris marina
(strain MBIC 11017) GN=dapB PE=3 SV=1
Length = 275
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 138/219 (63%), Gaps = 5/219 (2%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L I + ++L VL + +Q K V++DFT S+VY N++ A A+G+ V+ + E +
Sbjct: 58 LNIELTNELEPVLAAAAQEKQPCVMVDFTHPSSVYSNIRSAIAYGVFPVIGTTGLSDEQM 117
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
+ L+ F +KASMGCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + D PS A
Sbjct: 118 NDLTEFTEKASMGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAV 177
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A L +LG+ YN E+ ARG LG + +R+HS+ LPGL + V F PG+
Sbjct: 178 KTAQLLGDLGKTYNPALVEEKEHLAGARGS-LGSENIRIHSIRLPGLIAHQEVLFGAPGQ 236
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+Y+++HD +D MPG++L+IRKV L+ L YGLEK L
Sbjct: 237 LYTLRHDTSDRACYMPGVLLSIRKVTQLQTLSYGLEKIL 275
>sp|Q8DHH2|DAPB_THEEB 4-hydroxy-tetrahydrodipicolinate reductase OS=Thermosynechococcus
elongatus (strain BP-1) GN=dapB PE=3 SV=1
Length = 276
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 132/218 (60%), Gaps = 3/218 (1%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
LEIP+ L V + +Q K V++DFT VY+NV+ A A+G+ VV + E +
Sbjct: 59 LEIPISGSLQEVCVAAAQEKQPVVMVDFTHPQAVYENVRMAIAYGVYPVVGTTGLSPEQI 118
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
L+ F DKA MG +IAP SIG +LLQ+AAI AS ++ +VEI+E N + D PS A
Sbjct: 119 EELAEFADKADMGAVIAPNFSIGMVLLQEAAIRASQYFDHVEIIELHHNQKADAPSGTAL 178
Query: 124 QIANNLSNLGQIYNREDI--STDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEV 181
Q A L+ LG+ +N + S ++ +R+HS+ LPGL + V F PG++
Sbjct: 179 QTAQRLAELGKTFNPPQVQESEHLRGARGAFAAAEIRIHSVRLPGLIAHQEVIFGAPGQI 238
Query: 182 YSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
Y+++HD +D Q MPG++LAIRKV LK L+YGLEK L
Sbjct: 239 YTLRHDTSDRQCYMPGVLLAIRKVRQLKRLIYGLEKLL 276
>sp|B1XIL4|DAPB_SYNP2 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=dapB PE=3 SV=1
Length = 275
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 5/219 (2%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
+E+P+++DL L +QSK + V++DFT S VY N + A A+G+R VV + E +
Sbjct: 58 VEVPIVNDLEASLVMATQSKIQGVMVDFTHPSGVYANTRAAIAYGVRPVVGTTGLSEEQI 117
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
+ L F +KAS G LI P SIG +LLQQA++ A+ ++ +VEI+E N + D PS A
Sbjct: 118 NDLKEFAEKASTGALIIPNFSIGVVLLQQASLQAAKYFDHVEIIELHHNQKADAPSGTAI 177
Query: 124 QIANNLSNLGQIYNREDISTDVK---ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A L+ LG+ +N ++ + A+G V ED +R+HS+ LPGL + + F PG+
Sbjct: 178 KTAQMLAELGKQFNPAEVEEKEEMPGAKGAVT-EDNIRIHSVRLPGLIAHQEMIFGAPGQ 236
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+Y+++HD +D MPG++L+IRKV L LVYGLE L
Sbjct: 237 IYTLRHDTSDRSCYMPGVLLSIRKVTELNTLVYGLENIL 275
>sp|Q7NLC0|DAPB_GLOVI 4-hydroxy-tetrahydrodipicolinate reductase OS=Gloeobacter violaceus
(strain PCC 7421) GN=dapB PE=3 SV=1
Length = 269
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 136/220 (61%), Gaps = 5/220 (2%)
Query: 4 PLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLET 63
P+++ V +L + ++Q +A V++DFT +YD V+ A A+G+R VV + E
Sbjct: 51 PIDVLVTDNLEITCAMVAQERAPGVMVDFTHPRGIYDRVRSAIAYGVRPVVGTTGLPPEH 110
Query: 64 VSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA 122
+ L+ F DKAS GC++AP +IG ILLQQA + A+ ++ +VEI+E N + D PS A
Sbjct: 111 IEELAEFADKASTGCIVAPNFAIGMILLQQACLRAAEYFDHVEIIELHHNRKADAPSGTA 170
Query: 123 TQIANNLSNLGQIYNREDISTD---VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
A ++ G+ +N ++S ARG + D +R+HS+ LPGL + V F G
Sbjct: 171 LATAQMIATTGKTFNVPEVSESELVAGARGGMTPGD-IRIHSLRLPGLLAHQAVIFGGLG 229
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+ Y+++HD TD + MPG++LAIRKV+ LK+LVYGLEK +
Sbjct: 230 QSYTLRHDTTDRAAYMPGVLLAIRKVLGLKSLVYGLEKII 269
>sp|Q7V7D4|DAPB_PROMM 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain MIT 9313) GN=dapB PE=3 SV=1
Length = 283
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 9/224 (4%)
Query: 5 LEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
L++ + SD+ L S+SQS R AV++DFT S VY++ + A A+G+ V+
Sbjct: 60 LDVALTSDIEACLCSVSQSFHRTGPGQGAVLVDFTHPSVVYEHTRAAFAYGVHPVIGTTG 119
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ + + LS F KASMG + P S+G +LLQQAA +A+ Y N E+ E N + D
Sbjct: 120 LSHQQLVDLSEFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDNAELTELHHNRKADA 179
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYF 175
PS + A + LG+ +N ++ G G G+R+HS+ LPGL + V F
Sbjct: 180 PSGTCIKTAEMMEELGKSFNSPEVDEHESLTGSRGGLRASGLRLHSLRLPGLVAHQEVMF 239
Query: 176 SRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
PGE Y+++HD D + MPG++L +RKV L+ LVYGLE+ +
Sbjct: 240 GAPGESYTLRHDTIDRSAYMPGVLLTVRKVRQLQGLVYGLERLI 283
>sp|Q7V1N1|DAPB_PROMP 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapB
PE=3 SV=1
Length = 282
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 125/221 (56%), Gaps = 7/221 (3%)
Query: 6 EIPVMSDLTMVLGSISQ----SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQL 61
++ V +DL L SISQ K + V++DFT +VY+N + A A+G+ VV +
Sbjct: 61 DVLVSNDLEGSLCSISQDYRNEKIKPVLVDFTHPDSVYENTRSAIAYGISPVVGTTGLTP 120
Query: 62 ETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSP 120
++ L+ F KA++GC I P S+G +LLQQAA A+ Y N+E++E N + D PS
Sbjct: 121 SQINDLAIFAQKANIGCAIIPNFSVGMVLLQQAASVAAKFYDNIELIEMHHNQKADSPSG 180
Query: 121 DATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRP 178
+ A + + YN+ + +G G + G+ +HS+ LPGL + V P
Sbjct: 181 TCIKTAEMIEEYPKKYNQSLVEESESLKGVRGGVRDSGLNIHSIRLPGLLAHQVVIMGSP 240
Query: 179 GEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE Y+IKHD D ++ MPG++ AIRK+ +L+YGLEK +
Sbjct: 241 GETYTIKHDTIDRKAYMPGVLQAIRKIGKFNSLIYGLEKLI 281
>sp|Q7U807|DAPB_SYNPX 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain WH8102) GN=dapB PE=3 SV=1
Length = 277
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 7 IPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLE 62
+ V +D L ++SQS +A AV++DFT S VY++ + A A+G+ V+ + E
Sbjct: 58 VAVTADFEGCLCAVSQSVRDAEAGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPE 117
Query: 63 TVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPD 121
+S L F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS
Sbjct: 118 QLSDLCQFAAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNCKADAPSGT 177
Query: 122 ATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A + LG+ +N ++ G G E G+R+HS+ LPGL + V F PG
Sbjct: 178 CIKTAELMEELGKSFNPAEVDEHESLAGSRGGRRESGLRLHSLRLPGLVAHQEVMFGAPG 237
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
E Y+++HD D + MPG++L +RKV L+ LVYGLE+ +
Sbjct: 238 ETYTLRHDTIDRSAYMPGVLLTVRKVRSLQTLVYGLERLI 277
>sp|Q7VC38|DAPB_PROMA 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=dapB PE=3
SV=1
Length = 276
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 128/226 (56%), Gaps = 8/226 (3%)
Query: 1 MEQPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 56
M+Q +++ V +DL L SQS AV+IDFT + VY++ + + A+G+ V+
Sbjct: 52 MDQ-MDVAVTADLEGSLCVASQSVRNSSGNAVLIDFTHPNVVYEHSRASIAYGVHPVIGT 110
Query: 57 PHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR- 115
+ + + L F +KAS+G I P S+G +LLQQAA +A+ Y E+ ES N +
Sbjct: 111 TGLSIVQLEELREFANKASIGAAIIPNFSVGMVLLQQAAAAAASFYDYAELTESHHNQKA 170
Query: 116 DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTV 173
D PS + A + +G+ +N+ I +G G E G+R+HS+ LPG+ + V
Sbjct: 171 DAPSGTCIKTAEIIEEIGKSFNKTTIKEQESIKGSRGGLRESGLRLHSVRLPGIVAQQQV 230
Query: 174 YFSRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
F PGE Y + H+ D + MPG++ IRKV HLK+LVYGLEK L
Sbjct: 231 LFGSPGETYLLSHNTIDRSAYMPGVLHTIRKVRHLKSLVYGLEKIL 276
>sp|Q3AIK8|DAPB_SYNSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9605) GN=dapB PE=3 SV=1
Length = 277
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 128/220 (58%), Gaps = 7/220 (3%)
Query: 7 IPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLE 62
+ V +D L ++SQS + AV++DFT S VY++ + A A+G+ V+ + E
Sbjct: 58 VAVTADFEGCLCAVSQSVRDSGSGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPE 117
Query: 63 TVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPD 121
++ L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS
Sbjct: 118 QLNDLTEFSAKASVGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGT 177
Query: 122 ATQIANNLSNLGQIYNREDISTDVKARGQVLGE--DGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A + LG+ +N E++ G G+ G+R+HS+ LPGL + V F PG
Sbjct: 178 CIKTAELMEELGKSFNPEEVDEHESLAGCRGGQRDSGLRLHSVRLPGLVAHQEVMFGAPG 237
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
E Y+++HD D + MPG++L +RKV +L +LVYGLE+ +
Sbjct: 238 ETYTLRHDTIDRSAYMPGVLLTVRKVGNLGSLVYGLERLI 277
>sp|A5GSL5|DAPB_SYNR3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain RCC307) GN=dapB PE=3 SV=1
Length = 273
Score = 137 bits (344), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
LE+ + D L SQ AV++DFT VY++ + A A+G+ V+ + E +
Sbjct: 56 LEVALTQDFEGALCLASQQHPGAVLVDFTHPKVVYEHTRAAIAYGVTPVIGTTGLAPEQL 115
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDAT 123
L++F KASMG + P S+G +LLQQAA +A+ Y + E+VE N + D PS
Sbjct: 116 QELASFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDHAELVELHHNRKADAPSGTCI 175
Query: 124 QIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYFSRPGEV 181
+ A + LG+ +N +++ G G G+R+HS+ LPGL + V F GE
Sbjct: 176 KTAELMEELGKQFNAQEVEEHETLEGSRGGLRPSGLRLHSIRLPGLVAHQEVQFGGAGER 235
Query: 182 YSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
Y ++HD D + MPG++L +RKV L LVYGLE+ L
Sbjct: 236 YVLRHDTFDRAAYMPGVLLTVRKVRQLGALVYGLERLL 273
>sp|Q3AYN5|DAPB_SYNS9 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9902) GN=dapB PE=3 SV=1
Length = 277
Score = 133 bits (335), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 3 QPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
+ LE+ V +D L ++SQS AV++DFT S V+D+ + A A+G+ V+
Sbjct: 54 KELEVAVTADFEGCLCAVSQSVRNSDQNAVLVDFTHPSVVFDHTRAAIAYGVHPVIGTTG 113
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ ++ L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D
Sbjct: 114 LSPIQLNDLTEFSAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADA 173
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPGLPSSTTVYF 175
PS + A + + Q +N ++ +G G + G+ +HS+ LPGL + V F
Sbjct: 174 PSGTCIKTAELMEEVKQSFNPAEVDEHESLQGSRGGVRDSGLNLHSLRLPGLVAHQEVMF 233
Query: 176 SRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
PGE Y+++HD D + MPG++L IRKV L+ LVYGLE+ +
Sbjct: 234 GAPGETYTLRHDTIDRSAYMPGVLLTIRKVGSLQQLVYGLERLI 277
>sp|P24703|DAPB_COXBU 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=dapB PE=3 SV=2
Length = 239
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 7 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|A9NA71|DAPB_COXBR 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 7 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|A9KC25|DAPB_COXBN 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 7 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|B6J4U6|DAPB_COXB1 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain CbuK_Q154) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 7 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|B6J2F3|DAPB_COXB2 4-hydroxy-tetrahydrodipicolinate reductase OS=Coxiella burnetii
(strain CbuG_Q212) GN=dapB PE=3 SV=1
Length = 239
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 13/222 (5%)
Query: 7 IPVMSDLTMVLGS--------ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
I SDL +V G+ Q+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + + D
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
PS A + A + + +++D +ARG++ ++G+ +HS+ LPGL S +V F
Sbjct: 142 PSGTAIKTAQMIGEMRS--SKKDEPFKDRARGEI--KNGIPIHSIRLPGLFSHQSVIFGS 197
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +I+HD D MPG+ +A RKV+ L LVYGLE L
Sbjct: 198 NGETLTIRHDGMDRNCTMPGIFMACRKVMELDYLVYGLENLL 239
>sp|Q46KV7|DAPB_PROMT 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain NATL2A) GN=dapB PE=3 SV=1
Length = 282
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 116/224 (51%), Gaps = 9/224 (4%)
Query: 5 LEIPVMSDLTMVLGSISQ------SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 58
L++ + SD L + SQ S AV++DFT Y + + + A+G+ V+
Sbjct: 59 LDVFLSSDFEGSLCAASQNVPKDGSNNGAVLVDFTHPKFAYKHTRTSIAYGVHPVIGTTG 118
Query: 59 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DF 117
I + + LS F DKAS+G I P S+G +LLQQAA +A+ Y+ E+ E N + D
Sbjct: 119 ITADQLDDLSKFADKASLGSAIIPNFSVGMVLLQQAAAAAARFYEFAELTEMHHNKKADA 178
Query: 118 PSPDATQIANNLSNLGQIYNREDISTDVKARGQVLGE--DGVRVHSMVLPGLPSSTTVYF 175
PS + A + +NR + + +G G G+R+HS+ LPGL + V F
Sbjct: 179 PSGTCIKTAELIEEQRSNFNRSFVEEEESIKGSRGGSRASGLRLHSVRLPGLVAHQQVMF 238
Query: 176 SRPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE Y + H+ D + MPG++L I+K+ LVYGLEK L
Sbjct: 239 GSNGETYELSHNTIDRSAYMPGVLLVIKKIRSFNKLVYGLEKIL 282
>sp|B8DC19|DAPB_LISMH 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=dapB PE=3
SV=1
Length = 263
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 10/219 (4%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV +L+ +L I V+DFT Y N K G+R+VV E +
Sbjct: 50 LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A
Sbjct: 106 SELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAV 165
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A ++ + + +++ ARG +G+R+HS+ LPGL + V F G+
Sbjct: 166 KTAEMMAETREFVKQGAADEVELIEGARGSEY--EGMRIHSVRLPGLVAHQEVIFGAEGQ 223
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+I+HD D S M G+ L++RK L+ L+YGLE L
Sbjct: 224 GLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|C1KWK7|DAPB_LISMC 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain CLIP80459) GN=dapB
PE=3 SV=1
Length = 263
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 10/219 (4%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV +L+ +L I V+DFT Y N K G+R+VV E +
Sbjct: 50 LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A
Sbjct: 106 SELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAV 165
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A ++ + + +++ ARG +G+R+HS+ LPGL + V F G+
Sbjct: 166 KTAEMMTETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQ 223
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+I+HD D S M G+ L++RK L+ L+YGLE L
Sbjct: 224 GLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q71YA8|DAPB_LISMF 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=dapB PE=3
SV=1
Length = 263
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 10/219 (4%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV +L+ +L I V+DFT Y N K G+R+VV E +
Sbjct: 50 LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A
Sbjct: 106 SELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAV 165
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A ++ + + +++ ARG +G+R+HS+ LPGL + V F G+
Sbjct: 166 KTAEMMAETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQ 223
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+I+HD D S M G+ L++RK L+ L+YGLE L
Sbjct: 224 GLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q92AA1|DAPB_LISIN 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=dapB PE=3 SV=1
Length = 263
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%), Gaps = 12/220 (5%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV DL+ +L I V+DFT Y N K +R+VV E +
Sbjct: 50 LDVPVYGDLSEMLEEIKPD----CVVDFTIPKVGYSNTKTILEHSVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
S L + + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A
Sbjct: 106 SELKSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAV 165
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGE-DGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A ++ + + +++ ARG GE +G+R+HS+ LPGL + V F G
Sbjct: 166 KTAEMMAETREFVKQGAADEVELIEGARG---GEYEGMRIHSVRLPGLVAHQEVIFGAEG 222
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+ +I+HD D S M G+ L++RK L+ L+YGLE L
Sbjct: 223 QGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|Q8Y5Z6|DAPB_LISMO 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=dapB PE=3 SV=1
Length = 263
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 10/219 (4%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV +L+ +L I V+DFT Y N K G+R+VV E +
Sbjct: 50 LDVPVFGNLSEMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
S L + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS
Sbjct: 106 SELRTIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGV 165
Query: 124 QIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGE 180
+ A ++ + + +++ ARG +G+R+HS+ LPGL + V F G+
Sbjct: 166 KTAEMMAETREFVKQGAADEVELIEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEGQ 223
Query: 181 VYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+I+HD D S M G+ L++RK L+ L+YGLE L
Sbjct: 224 GLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENIL 262
>sp|A0AK12|DAPB_LISW6 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=dapB PE=3 SV=1
Length = 263
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 12/220 (5%)
Query: 5 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV 64
L++PV ++L+ +L ++K VV DFT Y N K G+R+VV E +
Sbjct: 50 LDVPVYANLSEML---EEAKPDCVV-DFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQI 105
Query: 65 SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDAT 123
+L + +G LIAP ++G++L+ Q A A+ ++ NVEI+E N D PS A
Sbjct: 106 ESLREIAETKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTAV 165
Query: 124 QIANNLSNLGQIYNREDISTDVK----ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPG 179
+ A ++ + + ++ +V+ ARG +G+R+HS+ LPGL + V F G
Sbjct: 166 KTAEMMAE-NRTFVKQGAEDEVELMEGARGAEY--EGMRIHSVRLPGLVAHQEVIFGAEG 222
Query: 180 EVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+ +I+HD D S M G+ L+IRK L+ L+YGLE L
Sbjct: 223 QGLTIRHDSYDRISFMSGVALSIRKTKELETLIYGLENIL 262
>sp|A4VUK5|DAPB_STRSY 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus suis
(strain 05ZYH33) GN=dapB PE=3 SV=1
Length = 255
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
V +DFT Y+N + A G VV E + L+A + +G LIAP +IG
Sbjct: 62 VWVDFTTPKFTYENTRFALENGFAPVVGTTGFTPEEIEELTALSAEKGLGGLIAPNFAIG 121
Query: 88 SILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNREDISTD-- 144
+ILL Q A A+ ++ N+EI+E +D PS A + A +S + Q + +
Sbjct: 122 AILLMQFAAQAAKYFPNLEIIELHHDKKKDAPSGTAVKTAELISQVRQSQTQGAADEEEL 181
Query: 145 -VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIR 203
ARG DG R+HS+ LPGL + V F GE +I+HD D S M G+ L I+
Sbjct: 182 IAGARGAAF--DGFRIHSVRLPGLVAHQEVIFGAQGEGLTIRHDSYDRISFMGGVNLGIK 239
Query: 204 KVVHLKNLVYGLEKFL 219
+VV LVYGLE L
Sbjct: 240 EVVKRSQLVYGLEHLL 255
>sp|A4W0U7|DAPB_STRS2 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus suis
(strain 98HAH33) GN=dapB PE=3 SV=1
Length = 255
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
V +DFT Y+N + A G VV E + L+A + +G LIAP +IG
Sbjct: 62 VWVDFTTPKFTYENTRFALENGFAPVVGTTGFTPEEIEELTALSAEKGLGGLIAPNFAIG 121
Query: 88 SILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNLGQIYNREDISTD-- 144
+ILL Q A A+ ++ N+EI+E +D PS A + A +S + Q + +
Sbjct: 122 AILLMQFAAQAAKYFPNLEIIELHHDKKKDAPSGTAVKTAELISQVRQSQTQGAADEEEL 181
Query: 145 -VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLILAIR 203
ARG DG R+HS+ LPGL + V F GE +I+HD D S M G+ L I+
Sbjct: 182 IAGARGAAF--DGFRIHSVRLPGLVAHQEVIFGAQGEGLTIRHDSYDRISFMGGVNLGIK 239
Query: 204 KVVHLKNLVYGLEKFL 219
+VV LVYGLE L
Sbjct: 240 EVVKRSQLVYGLEHLL 255
>sp|A2RJS9|DAPB_LACLM 4-hydroxy-tetrahydrodipicolinate reductase OS=Lactococcus lactis
subsp. cremoris (strain MG1363) GN=dapB PE=3 SV=1
Length = 260
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 12/199 (6%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
V +D T Y+N A G+R VV + V+ L F + +G LIAP ++G
Sbjct: 65 VWLDLTAPEVAYENTYFALEHGLRPVVGTTGFTEDEVARLIKFSREKELGGLIAPNFALG 124
Query: 88 SILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLS------NLGQIYNRED 140
++LL Q + A ++ +VEI+E + + D PS A + A ++ + G + +E
Sbjct: 125 AVLLMQFSKQAVKYFPDVEIIELHHDGKKDAPSGTAVKTAELMAEERLAHHQGAVDEKES 184
Query: 141 ISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLIL 200
+ V ARG VL +G+R+HS+ LPGL + V F GE +++HD D S M G+ L
Sbjct: 185 L---VGARGAVL--EGMRIHSVRLPGLVAHQEVIFGSKGEGLTLRHDSYDRSSFMTGIAL 239
Query: 201 AIRKVVHLKNLVYGLEKFL 219
IRKV+ + L YGLE FL
Sbjct: 240 GIRKVMTVSELKYGLEHFL 258
>sp|B2IR75|DAPB_STRPS 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae (strain CGSP14) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V IDFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWIDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 161 AELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGN 213
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 214 QGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>sp|Q834S6|DAPB_ENTFA 4-hydroxy-tetrahydrodipicolinate reductase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=dapB PE=3 SV=1
Length = 259
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 111/217 (51%), Gaps = 11/217 (5%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV L VL V IDFT Y N + A GM VV E ++
Sbjct: 50 IPVFQRLEEVLAVKPD-----VWIDFTVPEAAYPNTRFALEHGMAPVVGTTGFTEEQINE 104
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L+ + ++G LIAP +IG++L+ Q A A+ ++ +VEI+E N D PS A +
Sbjct: 105 LTNLSREKAIGGLIAPNFAIGAVLMMQFAQKAAQYFPDVEIIELHHDNKLDAPSGTAIKT 164
Query: 126 ANNLSNL---GQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVY 182
A + + + N +++ + ARG +G+R+HS+ LPGL + V F GE
Sbjct: 165 AEMIQEVRPAKKQGNPQEVESIPGARGADF--EGLRIHSVRLPGLVAHQQVQFGSVGEGL 222
Query: 183 SIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+I+HD D +S M G+ LA R+VV L+YGLE+ L
Sbjct: 223 TIRHDSYDRRSFMTGVALACRQVVQRTELLYGLEQML 259
>sp|Q02Y20|DAPB_LACLS 4-hydroxy-tetrahydrodipicolinate reductase OS=Lactococcus lactis
subsp. cremoris (strain SK11) GN=dapB PE=3 SV=1
Length = 260
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 12/199 (6%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
V +D T Y+N A G++ VV + V+ L F + +G LIAP ++G
Sbjct: 65 VWLDLTAPEVAYENAYFALEHGLKPVVGTTGFTEDEVARLIKFSREKELGGLIAPNFALG 124
Query: 88 SILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLS------NLGQIYNRED 140
++LL Q + A ++ +VEI+E + + D PS A + A ++ + G + +E
Sbjct: 125 AVLLMQFSKQAVKYFPDVEIIELHHDGKKDAPSGTAVKTAELMAEERLAHHQGAVDEKES 184
Query: 141 ISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLIL 200
+ V ARG VL +G+R+HS+ LPGL + V F GE +++HD D S M G+ L
Sbjct: 185 L---VGARGAVL--EGMRIHSVRLPGLVAHQEVIFGSKGEGLTLRHDSYDRSSFMTGIAL 239
Query: 201 AIRKVVHLKNLVYGLEKFL 219
IRKV+ + L YGLE FL
Sbjct: 240 GIRKVMTVSELKYGLEHFL 258
>sp|A3CMU3|DAPB_STRSV 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
sanguinis (strain SK36) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 28 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIG 87
V +DFT YDN + A G VV E + L + +G LIAP ++G
Sbjct: 62 VWVDFTTPKVAYDNTRFALEQGFCPVVGTTGFTPEQLEELITLSREKKLGGLIAPNFALG 121
Query: 88 SILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQIANNLSNL------GQIYNRED 140
++LL Q A A+ ++ NVEI+E +D PS A + A +S + G E
Sbjct: 122 AVLLMQFAAQAAKYFANVEIIELHHDQKKDAPSGTAIKTAELISQVRPSKQQGAADEEES 181
Query: 141 ISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPGLIL 200
I V ARG DG+R+HS+ LPGL + V F GE +++HD D S M G+ L
Sbjct: 182 I---VGARGADF--DGMRIHSVRLPGLVAHQEVIFGSQGEGLTMRHDSYDRASFMTGVNL 236
Query: 201 AIRKVVHLKNLVYGLEKFL 219
AI++VV LVYGLE L
Sbjct: 237 AIKEVVKRSELVYGLEHLL 255
>sp|B5E6K0|DAPB_STRP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae serotype 19F (strain G54) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 6 EIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVS 65
+IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 45 DIPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIA 99
Query: 66 ALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQ 124
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 100 ELKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIK 159
Query: 125 IANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFS 176
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 160 TAELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFG 212
Query: 177 RPGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 213 NQGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>sp|Q8DUL9|DAPB_STRMU 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=dapB PE=3
SV=1
Length = 255
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 13/218 (5%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
+PV +D + ++G ++ V +DFT Y+N A G R VV E ++
Sbjct: 46 VPVFTDKSDLVGLDAE-----VWVDFTIPKVAYENTHFALENGFRPVVGTTGFTQEQIAD 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L +G LIAP +IG++LL + A AS ++ ++EI+E +D PS A +
Sbjct: 101 LMTLSADKKLGGLIAPNFAIGAVLLMEFAAKASKYFPDLEIIELHHDKKKDAPSGTAVKT 160
Query: 126 ANNLSNLGQIYNREDISTD----VKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEV 181
A L + Y ++ + + V ARG DG R+HS+ LPGL + V F GE
Sbjct: 161 AE-LIREARAYKKQGAADEEETLVGARGAEF--DGFRIHSVRLPGLVAHQEVIFGAQGEG 217
Query: 182 YSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+++HD D S M G+ L I++VV + LVYGLE L
Sbjct: 218 LTLRHDSYDRISFMSGVNLGIKEVVQREQLVYGLEHLL 255
>sp|Q5X8U7|DAPB_LEGPA 4-hydroxy-tetrahydrodipicolinate reductase OS=Legionella
pneumophila (strain Paris) GN=dapB PE=3 SV=1
Length = 243
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 2/202 (0%)
Query: 19 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGC 78
SI +KA+ +V+D T A VY+N G R V+ + ++ L+ C+ +G
Sbjct: 43 SILDTKAQ-IVVDLTRADCVYENSLTIINHGARPVIGTSGLVETQINELTKLCEIKQIGG 101
Query: 79 LIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYN 137
+IAP S+G+IL+ A AS ++ VEI+E + D PS A + A ++ +
Sbjct: 102 IIAPNFSLGAILMMMLATKASEYFSEVEIIEGHHQQKLDAPSGTALKTAEMIAAARKKPK 161
Query: 138 REDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSIKHDITDVQSLMPG 197
+ ++ + + +HS+ LPGL + V F GE SI H+ D + MPG
Sbjct: 162 NKLPLKELTPGARGGSHHDINIHSLRLPGLLARQEVLFGNIGETLSITHNSIDRRCFMPG 221
Query: 198 LILAIRKVVHLKNLVYGLEKFL 219
++LA +KV++L NLVYGLE L
Sbjct: 222 IVLACQKVLNLTNLVYGLEHLL 243
>sp|A5FQT3|DAPB_DEHSB 4-hydroxy-tetrahydrodipicolinate reductase OS=Dehalococcoides sp.
(strain BAV1) GN=dapB PE=3 SV=1
Length = 263
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 8/215 (3%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IP +DL+ +L SQ+K V++DFT A V+ A A + V+ E +S
Sbjct: 53 IPYSADLSSIL---SQTKPD-VMVDFTVAKASMPAVRIAAAHKVNLVIGTTGFSPEEISE 108
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDA-TQ 124
+ +G ++AP ++G+I++ A AS + E++E + + D PS A
Sbjct: 109 IEQLAKTNDIGIILAPNFALGAIIMVHLAQVASRFLSSAEVIELHHDKKLDSPSGTALVT 168
Query: 125 IANNLSNLGQIYNREDISTDVKARGQVLGEDGVRVHSMVLPGLPSSTTVYFSRPGEVYSI 184
+A+ L G+ +N+ ARGQ DG+RVHS+ LPGL + V F G+ +I
Sbjct: 169 VASMLEARGEAFNKPPKENLTDARGQ--EHDGIRVHSVRLPGLLAHQEVIFGAAGQTLTI 226
Query: 185 KHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
+HD + MPG++LAI+++VH K V+GL+K L
Sbjct: 227 RHDAFSRECYMPGVLLAIKEIVHTKGFVFGLDKLL 261
>sp|C1CSH7|DAPB_STRZT 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae (strain Taiwan19F-14) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 161 AELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGN 213
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 214 QGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>sp|C1CFE0|DAPB_STRZJ 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae (strain JJA) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 161 AELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGN 213
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 214 QGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>sp|P63896|DAPB_STRR6 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 161 AELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGN 213
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 214 QGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
>sp|P63895|DAPB_STRPN 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=dapB PE=3 SV=1
Length = 255
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 7 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 66
IPV D + G + V +DFT + Y+N + A G VV E ++
Sbjct: 46 IPVFKDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAE 100
Query: 67 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE-SRPNARDFPSPDATQI 125
L F +G LIAP ++G++LL Q A A+ ++ NVEI+E +D PS A +
Sbjct: 101 LKEFSRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIELHHDKKKDAPSGTAIKT 160
Query: 126 ANNLSNLGQIYNREDISTDVK--------ARGQVLGEDGVRVHSMVLPGLPSSTTVYFSR 177
A ++ + RE I ARG DG+R+HS+ LPGL + V F
Sbjct: 161 AELMAEV-----RESIQQGAADEEELIAGARGADF--DGMRIHSVRLPGLVAHQEVIFGN 213
Query: 178 PGEVYSIKHDITDVQSLMPGLILAIRKVVHLKNLVYGLEKFL 219
GE +++HD D S M G+ L I++VV LVYGLE L
Sbjct: 214 QGEGLTLRHDSYDRISFMTGVNLGIKEVVKRHELVYGLEHLL 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,372,840
Number of Sequences: 539616
Number of extensions: 2593571
Number of successful extensions: 6687
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 6355
Number of HSP's gapped (non-prelim): 186
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)