BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027756
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 301 bits (770), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 167/216 (77%), Gaps = 15/216 (6%)
Query: 14 GDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAIPIANNQNNR--------- 64
GDQLTLSFQGQVYVFDSV PEKVQAVLLLLGGRE+P P + +QNNR
Sbjct: 81 GDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQ 140
Query: 65 ------RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAI 118
RLASL+RFREKRK RNF+KKIRYTVRKEVALRMQRNKGQFTSAKSNN+++ASA
Sbjct: 141 RFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAG 200
Query: 119 SSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
SSWGSNQ+WA + + +Q+Q+I CRHCGI EKSTPMMRRGP GPRTLCNACGLMWANKG
Sbjct: 201 SSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAF 260
Query: 179 RDLSKAAPQAGQTSSLNKNEENGTLKAEQVIRAVGN 214
RDLSKA+PQ Q LNKNE+ Q++ V N
Sbjct: 261 RDLSKASPQTAQNLPLNKNEDANLETDHQIMITVAN 296
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 297 bits (760), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/218 (68%), Positives = 168/218 (77%), Gaps = 17/218 (7%)
Query: 14 GDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAIPIANNQNNR--------- 64
GDQLTLSFQGQVYVFD VSPEKVQAVLLLLGGREVP T P + +QNNR
Sbjct: 77 GDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQ 136
Query: 65 ------RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAI 118
RLASL+RFREKRK RNF+K IRYTVRKEVALRMQR KGQFTSAKS+N+DS S
Sbjct: 137 RLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTG 196
Query: 119 SSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
S WGSNQSWA + +Q +++CRHCG SEKSTPMMRRGP+GPRTLCNACGLMWANKGTL
Sbjct: 197 SDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTL 256
Query: 179 RDLSKA-APQAGQTSSLNKNEENGTLKAEQVIRAVGNI 215
RDLSK PQ Q SLNKNE+ L+A+Q++ G+I
Sbjct: 257 RDLSKVPPPQTPQHLSLNKNED-ANLEADQMMEVTGDI 293
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 121/183 (66%), Gaps = 22/183 (12%)
Query: 15 DQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPSTTPAI-PIANNQNN---------- 63
+QLT+SF+GQVYVFD+V +KV AVL LLGG + P + +A QN+
Sbjct: 82 NQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRC 141
Query: 64 ---RRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISS 120
+R SL RFR+KR R FEKK+RY VR+EVALRM RNKGQFTS+K + +
Sbjct: 142 SLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTD-----GAYN 196
Query: 121 WGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRD 180
G++Q A D + +I C HCGIS K TPMMRRGP GPRTLCNACGL WAN+GTLRD
Sbjct: 197 SGTDQDSAQD---DAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRD 253
Query: 181 LSK 183
LSK
Sbjct: 254 LSK 256
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 61 QNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
Q R+A++I+FR+KRKERNF KK+RY RK +A + R +GQF
Sbjct: 678 QREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQF 721
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 61 QNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
Q R+A++I+FR+KRKERNF KK+RY RK +A + R +GQF
Sbjct: 678 QREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQF 721
>sp|Q00858|CGPB_FUSSO Cutinase gene palindrome-binding protein OS=Fusarium solani subsp.
pisi PE=2 SV=1
Length = 457
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 136 NQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLS 182
+++ VC CG + +P R+GP GP+TLCNACGL WA K R+ S
Sbjct: 397 SEEYVCTDCGTLD--SPEWRKGPSGPKTLCNACGLRWAKKEKKRNSS 441
>sp|B0G188|GTAP_DICDI GATA zinc finger domain-containing protein 16 OS=Dictyostelium
discoideum GN=gtaP PE=4 SV=1
Length = 695
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 138 DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
++ C CG++ +TP RRGP G +TLCNACGL WA
Sbjct: 476 ELSCHTCGVT--NTPEWRRGPNGAKTLCNACGLAWA 509
>sp|O13415|AREA_ASPOR Nitrogen regulatory protein areA OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=areA PE=4 SV=1
Length = 866
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 66 LASLIRFREKRKERNFEKKIRYTVRKEVA--LRMQRNKGQFTSAKSNNEDSASAISSWGS 123
+AS+ R + ++ +K R T A LR + TS S N SA+SS
Sbjct: 583 VASVSEVRNREQDPRRQKIARTTSTPNTAQLLRQSMHSNNNTSHTSPNTPPESALSSAVP 642
Query: 124 NQ--SWAGDVNGSQ--NQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLR 179
++ S G NG Q N C +C ++TP+ RR PEG + LCNACGL G +R
Sbjct: 643 SRPASPGGSKNGDQGSNGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLFLKLHGVVR 699
Query: 180 DLS 182
LS
Sbjct: 700 PLS 702
>sp|Q75JZ0|GTAH_DICDI GATA zinc finger domain-containing protein 8 OS=Dictyostelium
discoideum GN=gtaH PE=4 SV=1
Length = 519
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 140 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANK-----GTLRDLSKAAPQAGQTSSL 194
VCR+C +E TP R+GP+G ++LCNACGL +A L L++ + TS L
Sbjct: 461 VCRNCKTTE--TPEWRKGPDGTKSLCNACGLHYAKNVKREAAGLHHLNEVGKKVDLTSIL 518
Query: 195 N 195
N
Sbjct: 519 N 519
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 PSTTPAIPIANNQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAK 108
P T A+P+ + + R A ++R+REKRK R FEK IRY RK A R KG+F
Sbjct: 282 PGTQRAVPLTSAE---REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 338
Query: 109 SNNE 112
NE
Sbjct: 339 DTNE 342
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 53 PAIPIANNQNNR-RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNN 111
P P A + R R A ++R+REK+K R FEK IRY RK A + R KG+F K +
Sbjct: 273 PPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVD 332
Query: 112 EDSASAISS 120
E++ A S+
Sbjct: 333 EEANQAFST 341
>sp|Q54TM6|GTAI_DICDI GATA zinc finger domain-containing protein 9 OS=Dictyostelium
discoideum GN=gtaI PE=4 SV=1
Length = 536
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Query: 139 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
+ CRHCG ++ TP RRGP+G ++LCNACGL ++
Sbjct: 477 LFCRHCGTTD--TPEWRRGPDGRKSLCNACGLHYS 509
>sp|P17429|AREA_EMENI Nitrogen regulatory protein areA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=areA PE=1 SV=2
Length = 876
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 67 ASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQ- 125
AS+ R + ++ +K R + A ++++ +S S N S ++S ++
Sbjct: 597 ASVSEVRNRDQDPRRQKIARTSSTPNTAQLLRQSMQNQSSHTSPNTPPESGLNSAAPSRP 656
Query: 126 -SWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLS 182
S G NG QN C +C ++TP+ RR PEG + LCNACGL G +R LS
Sbjct: 657 ASPGGTKNGEQNGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLFLKLHGVVRPLS 711
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 53 PAIPIANNQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
P+ + N+ +RR +L++FR KR +R F+KKIRY RK +A R R KGQF
Sbjct: 521 PSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQF 572
>sp|P40209|GAT2_YEAST Protein GAT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GAT2 PE=4 SV=1
Length = 560
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 140 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 172
C HCG E TP R+GP G RTLCNACGL +
Sbjct: 471 FCFHCG--ETETPEWRKGPYGTRTLCNACGLFY 501
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 50 STTPAIPIANNQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
S+TP +++ RR A+L +FR KRKER F+KK+RY RK++A R +GQF
Sbjct: 428 SSTPMPEETCSRSERRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQF 482
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 60 NQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF---TSAKSNNED 113
N+ ++R A+L +FR+KRKER F KK+RY RK++A + R +GQF T+A +++ D
Sbjct: 664 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDND 720
>sp|P78714|WC2_NEUCR White collar 2 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-2
PE=1 SV=1
Length = 530
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 137 QDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
++ VC CG + +P R+GP GP+TLCNACGL WA
Sbjct: 464 EEYVCTDCGTLD--SPEWRKGPSGPKTLCNACGLRWA 498
>sp|Q54TE3|GTAJ_DICDI GATA zinc finger domain-containing protein 10 OS=Dictyostelium
discoideum GN=gtaJ PE=4 SV=1
Length = 714
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 138 DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
++ C +C ++E TP RRGP+G TLCNACGL +A
Sbjct: 628 NLKCHYCEVTE--TPEWRRGPDGDHTLCNACGLHYA 661
>sp|O13412|AREA_ASPNG Nitrogen regulatory protein areA OS=Aspergillus niger GN=areA PE=4
SV=1
Length = 882
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 67 ASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWGSNQ- 125
AS+ R + ++ +K R T A ++++ TS S N S +SS ++
Sbjct: 599 ASVSEVRNREQDPRRQKIARTTSTPNTAQLLRQSMNANTSHTSPNTPPESGLSSAVPSRP 658
Query: 126 -SWAGDVNGSQNQ-DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLS 182
S G NG Q+ C +C ++TP+ RR PEG + LCNACGL G +R LS
Sbjct: 659 ASPGGSKNGEQSSGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLFLKLHGVVRPLS 714
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 64 RRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF----TSAKSNNED 113
+R A+L++FR KRKER FEKK+RY RK++A + KGQF KS +ED
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSED 494
>sp|Q8W4H1|GAT26_ARATH GATA transcription factor 26 OS=Arabidopsis thaliana GN=GATA26 PE=2
SV=1
Length = 510
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
C HCG++ +TP+ R GP LCNACG W KGTL
Sbjct: 7 CYHCGVT--NTPLWRNGPPEKPVLCNACGSRWRTKGTL 42
>sp|Q55C49|GTAG_DICDI GATA zinc finger domain-containing protein 7 OS=Dictyostelium
discoideum GN=gtaG PE=4 SV=1
Length = 1006
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 139 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANK 175
+ C +CG K+TP RRGP GP TLCNACGL +A K
Sbjct: 840 LYCHNCGT--KNTPEWRRGPSGPATLCNACGLAYAKK 874
>sp|Q54HA4|GTAO_DICDI GATA zinc finger domain-containing protein 15 (Fragment)
OS=Dictyostelium discoideum GN=gtaO PE=4 SV=1
Length = 511
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Query: 131 VNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
+ S +++IVC+ CG +++P R+GP+G ++LCNACGL +A
Sbjct: 443 LQSSNSEEIVCQACGT--RASPEWRKGPDGFKSLCNACGLYYA 483
>sp|Q5PP38|GAT27_ARATH GATA transcription factor 27 OS=Arabidopsis thaliana GN=GATA27 PE=2
SV=1
Length = 470
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
C HCG++ STP+ R GP LCNACG W KG+L
Sbjct: 7 CYHCGVT--STPLWRNGPPEKPVLCNACGSRWRTKGSL 42
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-1
PE=2 SV=2
Length = 1167
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKNEEN 200
C +C ++TP RRGP G R LCN+CGL WA K T R + + + G S++K + N
Sbjct: 934 CANC--HTRNTPEWRRGPSGNRDLCNSCGLRWA-KQTGRVSPRTSSRGGNGDSMSK-KSN 989
Query: 201 GTLKAEQVIRAVGNINGST 219
+ + R VGN + ST
Sbjct: 990 SPSHSSPLHREVGNDSPST 1008
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 63 NRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
++R A+L++FR KRK+R F+KK+RY RK++A + R KGQF
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQF 456
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 61 QNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT 105
Q+ +R A+L +FR KRK+R +EKK+RY RK++A + R KGQF
Sbjct: 505 QSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFV 549
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 65 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSA 115
R A+L +FR+KRK RNF KK+RY RK +A + R +GQF +S ED A
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR-QSGQEDQA 761
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 65 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSA 115
R A+L +FR+KRK RNF KK+RY RK +A + R +GQF +S ED A
Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVR-QSGQEDQA 761
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 19 LSFQGQVYVFDSVSPEKVQAVLLLLGG---REVPST-TPAIPIANNQNNRRLASLIRFRE 74
+S QG ++ +VS + L+ G E+ +T TPA+ ++ + R A ++R+RE
Sbjct: 182 ISQQGFNFINQTVSTRTIDVPLVPESGGVTAEMTNTETPAVQLSPAE---REARVLRYRE 238
Query: 75 KRKERNFEKKIRYTVRKEVALRMQRNKGQF 104
KRK R FEK IRY RK A R KG+F
Sbjct: 239 KRKNRKFEKTIRYASRKAYAEMRPRIKGRF 268
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 42 LLGGREVPSTTPAIPIANNQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNK 101
++ E + P P ++R A+L +FR KRK+R FEKK+RY RK +A + R K
Sbjct: 551 MIAPTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVK 610
Query: 102 GQF 104
GQF
Sbjct: 611 GQF 613
>sp|P18494|GLN3_YEAST Nitrogen regulatory protein GLN3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GLN3 PE=1 SV=2
Length = 730
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 115 ASAISSWGSNQSWAGDVNGSQNQD--IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 172
A+++SS SN +G QN+ I C +C + TP+ RR PEG TLCNACGL
Sbjct: 283 AASVSSSISNMEPSG-----QNKKPLIQCFNCKTFK--TPLWRRSPEG-NTLCNACGLFQ 334
Query: 173 ANKGTLRDLS 182
GT+R LS
Sbjct: 335 KLHGTMRPLS 344
>sp|Q9USM3|SFH1_SCHPO Chromatin structure-remodeling complex subunit sfh1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sfh1 PE=1 SV=1
Length = 418
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
CR C + T +RRGPEG ++LCNACG+ +A G L
Sbjct: 372 CRWCNVLGTGTFCVRRGPEGNKSLCNACGVAYAKTGQL 409
>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2
SV=1
Length = 308
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 26/90 (28%)
Query: 107 AKSNNEDSASAISSWGS---------------------NQSWAGDVN---GSQNQDIVCR 142
AK+ ++ S SA S+W S Q +AGD++ G C
Sbjct: 141 AKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRVKEQDFAGDMDVDCGESGGGRRCL 200
Query: 143 HCGISEKSTPMMRRGPEGPRTLCNACGLMW 172
HC +EK TP R GP GP+TLCNACG+ +
Sbjct: 201 HCA-TEK-TPQWRTGPMGPKTLCNACGVRY 228
>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2
SV=2
Length = 274
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKN 197
C+HCG +EK TP R GP GP+TLCNACG+ + + G L + A T+ L+ N
Sbjct: 196 CQHCG-AEK-TPQWRAGPAGPKTLCNACGVRYKS-GRLVPEYRPANSPTFTAELHSN 249
>sp|Q55GK0|GTAE_DICDI GATA zinc finger domain-containing protein 5 OS=Dictyostelium
discoideum GN=gtaE PE=4 SV=1
Length = 952
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTL 178
C C S +TP R+GPEGP TLCNACGL +A K L
Sbjct: 241 CYQCNTS--NTPEWRKGPEGPATLCNACGLAYAKKQKL 276
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 65 RLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFTS-AKSNNED 113
R A ++R+REKRK R FEK IRY RK A R KG+F ++ N+D
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334
>sp|Q55EQ0|GTAF_DICDI GATA zinc finger domain-containing protein 6 OS=Dictyostelium
discoideum GN=gtaF PE=4 SV=1
Length = 623
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 139 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWAN 174
+ C CG E T RRGP+G ++LCNACG+ +AN
Sbjct: 318 LYCHSCG--ETQTSQWRRGPDGCKSLCNACGIRFAN 351
>sp|P43574|GAT1_YEAST Transcriptional regulatory protein GAT1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAT1 PE=1 SV=1
Length = 510
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 132 NGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLS 182
N S N DI C +C S +TP+ R+ P+G LCNACGL G R LS
Sbjct: 301 NTSSNPDIKCSNCTTS--TTPLWRKDPKG-LPLCNACGLFLKLHGVTRPLS 348
>sp|Q54NM5|GTAL_DICDI GATA zinc finger domain-containing protein 12 OS=Dictyostelium
discoideum GN=gtaL PE=4 SV=1
Length = 640
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 140 VCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 172
VC +C S+ TP RRGP+G +TLCNACG+ +
Sbjct: 505 VCVNCKTSD--TPEWRRGPQGAKTLCNACGIRY 535
>sp|Q9SV30|GATA8_ARATH GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2
SV=1
Length = 322
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKN 197
C HC +++ TP R GP GP+TLCNACG+ + + G L + A T +L+ N
Sbjct: 231 CMHCEVTK--TPQWRLGPMGPKTLCNACGVRYKS-GRLFPEYRPAASPTFTPALHSN 284
>sp|Q75JZ1|GTAC_DICDI GATA zinc finger domain-containing protein 3 OS=Dictyostelium
discoideum GN=gtaC PE=4 SV=1
Length = 587
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 63 NRRLASLIRFREKRKE---RNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAIS 119
N+ ++L +EK E + E +I +++ K + + + K + T A+ +D
Sbjct: 428 NKDYSNLSELKEKIDEVVNTSKEIEIIHSIAKSLPPQTRARKKRSTKAEKLQKDLIGIKR 487
Query: 120 SWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
S+ V +++ C CG E TP R+GP G +TLCNACGL +A
Sbjct: 488 SY---------VTTPKSKGTYCIFCGTME--TPEWRKGPGGHKTLCNACGLHYA 530
>sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana
GN=GATA22 PE=2 SV=1
Length = 352
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 97 MQRNKGQFTSAKSNNEDSASAISSWGSNQSWAGDVNGSQNQDIV--CRHCGISEKSTPMM 154
M++ K T++ S+ + + + SS SN NG N ++ C C ++ TP+
Sbjct: 158 MKKKKAIITTSDSSKQHTNNDQSSNLSNSERQ---NGYNNDCVIRICSDCNTTK--TPLW 212
Query: 155 RRGPEGPRTLCNACGL 170
R GP GP++LCNACG+
Sbjct: 213 RSGPRGPKSLCNACGI 228
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 57 IANNQNNRRLASLIRFREKRKERNFEKKIRYTVRKEVALRMQRNKGQFT-SAKSNNEDSA 115
IA++ R +++R++EK+K R F+K++RY RKE A +R KG+F S ++ + D
Sbjct: 308 IASSHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVKSGEAYDYDPM 367
Query: 116 SAISSW 121
S S+
Sbjct: 368 SPTRSY 373
>sp|Q92269|NRFA_PENUR Nitrogen regulatory protein nrfA OS=Penicillium urticae GN=nrfA
PE=4 SV=1
Length = 865
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 66 LASLIRFREKRKE-RNFEKKIRYTVRKEVALRMQRNKGQFTSAKSNNEDSASAISSWG-- 122
+AS+ R + ++ R + K R A ++++ S N S S G
Sbjct: 581 VASVSDVRNQNQDPRRYGKVPRTASTPNAAALLRQSLNGSASGPPTNHPSPSTPPESGLS 640
Query: 123 -SNQSWAGDVNGSQNQD-----IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKG 176
+ S G GS+N D C +C ++TP+ RR PEG + LCNACGL G
Sbjct: 641 SAVPSRPGSPGGSKNGDPNAGPTTCTNCFT--QTTPLWRRNPEG-QPLCNACGLFLKLHG 697
Query: 177 TLRDLS 182
+R LS
Sbjct: 698 VVRPLS 703
>sp|Q8L4M6|GATA3_ARATH GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2
SV=2
Length = 269
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 141 CRHCGISEKSTPMMRRGPEGPRTLCNACGL 170
C HCG + +TP R GP GP+TLCNACG+
Sbjct: 182 CSHCGTN--NTPQWRTGPVGPKTLCNACGV 209
>sp|Q54KX0|GTAN_DICDI GATA zinc finger domain-containing protein 14 OS=Dictyostelium
discoideum GN=gtaN PE=4 SV=1
Length = 953
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 139 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWA 173
+ C CG ++ TP R+GP G ++LCNACGL +A
Sbjct: 891 LFCTSCGTTQ--TPEWRKGPAGGKSLCNACGLHYA 923
>sp|P40349|URB1_USTMA Siderophore biosynthesis regulatory protein URBS1 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=URBS1 PE=4 SV=2
Length = 1084
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 117 AISSWGSNQSWAGDV---------NGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNA 167
A SS S Q GDV + + + C +CG++ STP+ RR P+G T+CNA
Sbjct: 305 ADSSTNSPQYVPGDVYEHEGSGSPPAAHHAGMRCSNCGVT--STPLWRRAPDG-STICNA 361
Query: 168 CGLMWANKGTLRDLS 182
CGL + T R S
Sbjct: 362 CGLYIKSHSTHRSAS 376
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 139 IVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDL 181
+ C +C + +TP+ RR +G +CNACGL GT R +
Sbjct: 480 LRCTNCQTT--TTPLWRRDEDG-NNICNACGLYHKLHGTHRPI 519
>sp|Q9M1U2|GAT14_ARATH GATA transcription factor 14 OS=Arabidopsis thaliana GN=GATA14 PE=2
SV=1
Length = 204
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 138 DIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMW 172
D C HCG + TP+ R GP G TLCNACG+ +
Sbjct: 114 DKSCSHCGT--RKTPLWREGPRGAGTLCNACGMRY 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,120,640
Number of Sequences: 539616
Number of extensions: 3084723
Number of successful extensions: 9893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 9723
Number of HSP's gapped (non-prelim): 229
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)