BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027757
(219 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255568647|ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
gi|223535455|gb|EEF37125.1| GTP-binding protein engB, putative [Ricinus communis]
Length = 296
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/219 (89%), Positives = 207/219 (94%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIVVGPYAGHSQIKEVEFVKSS RA+DCP++DRPEFAILGRSNVGKSSLINALV
Sbjct: 78 MVLPGSNIVVGPYAGHSQIKEVEFVKSSSRARDCPREDRPEFAILGRSNVGKSSLINALV 137
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP + DWSSFTKGYFLNRE
Sbjct: 138 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRE 197
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LV VLLLIDASVPPQKIDLDCA+WLGRNNIPLTFVFTKCDKMK K RPDENI++FQ+
Sbjct: 198 TLVAVLLLIDASVPPQKIDLDCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQE 257
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
LIR+NY HPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ
Sbjct: 258 LIRQNYQEHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 296
>gi|224095021|ref|XP_002310331.1| predicted protein [Populus trichocarpa]
gi|222853234|gb|EEE90781.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/219 (89%), Positives = 206/219 (94%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCP+DDRPEFAILGRSNVGKSSLIN L
Sbjct: 84 IILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINVLA 143
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFAKAPD RMDWSSFTKGYFLNRE
Sbjct: 144 RKKEVALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRE 203
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LV VLLLIDASVPPQKIDLDCANWLGRNNIP+T VFTKCDKMK K RPDENIK+FQ+
Sbjct: 204 TLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQE 263
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
L+R+NY HP WIMTSSVTGLGRDELLLHMSQLRNYWDQ
Sbjct: 264 LMRQNYREHPAWIMTSSVTGLGRDELLLHMSQLRNYWDQ 302
>gi|297821515|ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/219 (86%), Positives = 207/219 (94%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GP+AGHSQIKEVEFVKSS RA+DCPKDDRPE AILGRSNVGKSSLIN LV
Sbjct: 82 MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLV 141
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAK D + DWS+FTKGYFLNR+
Sbjct: 142 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRD 201
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LV +LLLIDASVPPQKIDLDCANWLGRNN+P+TFVFTKCDKMK AKG+RPDENIK+FQQ
Sbjct: 202 TLVCILLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKAAKGKRPDENIKAFQQ 261
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
+IREN+ HPPWI+TSSV+GLGRDELLLHMSQLRNYWDQ
Sbjct: 262 IIRENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWDQ 300
>gi|18400109|ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
gi|21903474|sp|O81004.2|Y2287_ARATH RecName: Full=GTP-binding protein At2g22870; AltName: Full=Protein
EMBRYO DEFECTIVE 2001
gi|20197273|gb|AAC32434.2| putative nucleotide-binding protein [Arabidopsis thaliana]
gi|21592880|gb|AAM64830.1| putative nucleotide-binding protein [Arabidopsis thaliana]
gi|52354269|gb|AAU44455.1| hypothetical protein AT2G22870 [Arabidopsis thaliana]
gi|55740571|gb|AAV63878.1| hypothetical protein At2g22870 [Arabidopsis thaliana]
gi|330252273|gb|AEC07367.1| GTP-binding protein [Arabidopsis thaliana]
Length = 300
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/219 (86%), Positives = 206/219 (94%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GP+AGHSQIKEVEFVKSS RA+DCPKDDRPE AILGRSNVGKSSLIN LV
Sbjct: 82 MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLV 141
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAK D + DWS+FTKGYFLNR+
Sbjct: 142 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRD 201
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
SLV VLLLIDASVPPQKIDLDCANWLGRNN+P+TFVFTKCDKMK KG+RPDENIK+FQQ
Sbjct: 202 SLVCVLLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQ 261
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
+IREN+ HPPWI+TSSV+GLGRDELLLHMSQLRNYWDQ
Sbjct: 262 IIRENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWDQ 300
>gi|449532169|ref|XP_004173055.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 219
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/219 (87%), Positives = 207/219 (94%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GPYAG S++KEVEFVKSS RA+DCPKD +PEFAILGRSNVGKSSLINALV
Sbjct: 1 MLLPGSNIVLGPYAGDSRVKEVEFVKSSARARDCPKDSKPEFAILGRSNVGKSSLINALV 60
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAK + RMDWSSFTKGYF+NR+
Sbjct: 61 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSETARMDWSSFTKGYFMNRD 120
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LV VLLLIDASVPPQKIDLDCANWLGRNNIP+TFVFTKCDKMKV+KG+RPDENI+ FQQ
Sbjct: 121 TLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTFVFTKCDKMKVSKGKRPDENIREFQQ 180
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
LIR+NY HP WIMTSSVTGLGRDELLLHMSQLRNYWDQ
Sbjct: 181 LIRQNYKVHPSWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
>gi|356546231|ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 305
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 206/218 (94%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+LPGSNI VGPYAG S+IK+V+FVKSS RA+DCPKDD PEFA+LGRSNVGKSSLIN+LVR
Sbjct: 88 VLPGSNIAVGPYAGDSRIKDVQFVKSSARARDCPKDDLPEFAVLGRSNVGKSSLINSLVR 147
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
KKE+ALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFAKAP+ + DWSSFTKGYFLNR +
Sbjct: 148 KKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNRST 207
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
LV VLLLIDASVPPQK+DLDCANWLGRNNIP+TFVFTKCDKMKVAKG+RPDENI+ FQ+L
Sbjct: 208 LVAVLLLIDASVPPQKVDLDCANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQEL 267
Query: 182 IRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
IR+NY HPPWIMTSSVTG+GRDELLLHMSQLRNYWDQ
Sbjct: 268 IRQNYKQHPPWIMTSSVTGMGRDELLLHMSQLRNYWDQ 305
>gi|356521366|ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 301
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 205/218 (94%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+LPGSNI VGPYAG S IK+V+FVKSS RA+DCPKD+RPEFA+LGRSNVGKSSLIN+LVR
Sbjct: 84 VLPGSNIAVGPYAGDSHIKDVQFVKSSARARDCPKDNRPEFAVLGRSNVGKSSLINSLVR 143
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
KKE+ALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFAKAP+ + DWSSFTKGYFLN+ +
Sbjct: 144 KKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNKST 203
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
LV VLLLIDASVPPQKIDLDCANWLGRNNIP+TFVFTKCDKMKVAKG+RPDENI+ FQ+L
Sbjct: 204 LVAVLLLIDASVPPQKIDLDCANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQEL 263
Query: 182 IRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
IR+NY HPPWIMTSS TG+GRDELLLHMSQLRNYWDQ
Sbjct: 264 IRQNYKQHPPWIMTSSATGMGRDELLLHMSQLRNYWDQ 301
>gi|297836256|ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
gi|297331850|gb|EFH62269.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/219 (84%), Positives = 204/219 (93%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GP+AGHSQIKEVEFVKSS RA+DC KDDRPE AILGRSNVGKSSLIN LV
Sbjct: 82 MVLPGSNIVIGPFAGHSQIKEVEFVKSSARARDCTKDDRPEIAILGRSNVGKSSLINCLV 141
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAK D + DWS+FTKGYFLNR+
Sbjct: 142 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRD 201
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LV VLLLIDASVPPQKIDLDCANWLGRNN+ +TFVFTKCDKMK KG+RPDENIK+FQQ
Sbjct: 202 TLVCVLLLIDASVPPQKIDLDCANWLGRNNVQMTFVFTKCDKMKATKGKRPDENIKAFQQ 261
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
+I+EN+ HPPWI+TSSV+GLGRDELLLHMSQLRNYWDQ
Sbjct: 262 IIKENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWDQ 300
>gi|242036437|ref|XP_002465613.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor]
gi|241919467|gb|EER92611.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor]
Length = 310
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/219 (82%), Positives = 195/219 (89%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++PGSNIVVGPYAG +++KE EFVKSS RA+DCPKDDRPEFA+LGRSNVGKSSLINAL
Sbjct: 89 MVIPGSNIVVGPYAGDARVKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALT 148
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+KE ALTSKKPGKTQ INHFLVNKSWY+VDLPGYGFA A RMDWSSFTKGYFLNR+
Sbjct: 149 RRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGFAAASQSARMDWSSFTKGYFLNRD 208
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LVGVLLLIDAS+PPQKIDLDCANWLGRNNI LTFVFTKCDK+K KG RPDENIK FQ+
Sbjct: 209 TLVGVLLLIDASIPPQKIDLDCANWLGRNNIGLTFVFTKCDKVKKGKGGRPDENIKQFQE 268
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I YP PPWIMTSSVTGLGRD LLLHMSQLRNYWD
Sbjct: 269 TISGLYPDPPPWIMTSSVTGLGRDGLLLHMSQLRNYWDN 307
>gi|115451735|ref|NP_001049468.1| Os03g0232500 [Oryza sativa Japonica Group]
gi|108707011|gb|ABF94806.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113547939|dbj|BAF11382.1| Os03g0232500 [Oryza sativa Japonica Group]
gi|215766877|dbj|BAG99105.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 318
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 193/219 (88%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++P SNIVVGPYAG S++KE EFVKSS RA+DCPKDDRPEFA+LGRSNVGKSSLINAL+
Sbjct: 94 MVIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALI 153
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+KE ALTSKKPGKTQ INHFLVNKSWY+VDLPGYGFA A R DWSSFTKGYFLNR+
Sbjct: 154 RRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGFAAASQSARTDWSSFTKGYFLNRD 213
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LVGVLLL+DAS+PPQKID+DCANWLGRNNI LT+VFTKCDK K KG RP+ENIK FQ+
Sbjct: 214 TLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKCDKSKKGKGGRPEENIKEFQE 273
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I YP PPWIMTSSVTGLGRD LLLHMSQLRNYWD
Sbjct: 274 TISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNYWDN 312
>gi|226530446|ref|NP_001151819.1| GTP-binding protein [Zea mays]
gi|194700920|gb|ACF84544.1| unknown [Zea mays]
gi|195649961|gb|ACG44448.1| GTP-binding protein [Zea mays]
gi|413956461|gb|AFW89110.1| GTP-binding protein [Zea mays]
Length = 308
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/219 (81%), Positives = 192/219 (87%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++PGSNIVVGPYAG +++K EFVKSS RA+DCP DDRPEFA+LGRSNVGKSSLINAL
Sbjct: 87 MVIPGSNIVVGPYAGDARVKGAEFVKSSARARDCPNDDRPEFAVLGRSNVGKSSLINALT 146
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+KE ALTSKKPGKTQ INHFLVNKSWY+VDLPGYGFA A RMDWSSFTKGYFLNR+
Sbjct: 147 RRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGFAAASQSARMDWSSFTKGYFLNRD 206
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LVGVLLLIDAS+PPQKIDLDCANWLGRNNI LTFVFTKCDK+K KG RPDENIK F +
Sbjct: 207 TLVGVLLLIDASIPPQKIDLDCANWLGRNNIGLTFVFTKCDKVKKGKGGRPDENIKEFHE 266
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I YP PPWIMTSSVTGLGRD LLLHMSQLRNYWD
Sbjct: 267 TISGLYPDPPPWIMTSSVTGLGRDGLLLHMSQLRNYWDN 305
>gi|357113298|ref|XP_003558441.1| PREDICTED: GTP-binding protein At2g22870-like [Brachypodium
distachyon]
Length = 306
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 192/219 (87%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++PGSNIVVGPYAG +++KE EF+K S A+DCPKDDRPEFA+LGRSNVGKSSLINAL
Sbjct: 85 MLIPGSNIVVGPYAGDARVKEAEFIKCSAHARDCPKDDRPEFAVLGRSNVGKSSLINALT 144
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+KE ALTSKKPGKTQ INHFL+NKSWY+VDLPGYGFA A RMDWSSFTKGYFLNR+
Sbjct: 145 RRKEAALTSKKPGKTQTINHFLINKSWYLVDLPGYGFAAASKSARMDWSSFTKGYFLNRD 204
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
+LVGVLLL+DAS+PPQ+IDLDCANWLGRNN+ LTFVFTKCDK+K KG RPDENIK FQ+
Sbjct: 205 TLVGVLLLVDASIPPQQIDLDCANWLGRNNVGLTFVFTKCDKVKKGKGGRPDENIKEFQE 264
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I YP PPWIMTSS TGLGRD LLLHMSQLRNYWD
Sbjct: 265 NISSLYPEPPPWIMTSSTTGLGRDGLLLHMSQLRNYWDN 303
>gi|218192390|gb|EEC74817.1| hypothetical protein OsI_10639 [Oryza sativa Indica Group]
Length = 348
Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 176/249 (70%), Positives = 193/249 (77%), Gaps = 30/249 (12%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++P SNIVVGPYAG S++KE EFVKSS RA+DCPKDDRPEFA+LGRSNVGKSSLINAL+
Sbjct: 94 MVIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALI 153
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG------------------------ 96
R+KE ALTSKKPGKTQ INHFLVNKSWY+VDLPGYG
Sbjct: 154 RRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFA 213
Query: 97 ------FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNN 150
FA A R DWSSFTKGYFLNR++LVGVLLL+DAS+PPQKID+DCANWLGRNN
Sbjct: 214 LVFIGLFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNN 273
Query: 151 IPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM 210
I LT+VFTKCDK K KG RP+ENIK FQ+ I YP PPWIMTSSVTGLGRD LLLHM
Sbjct: 274 IGLTYVFTKCDKSKKGKGGRPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHM 333
Query: 211 SQLRNYWDQ 219
SQLRNYWD
Sbjct: 334 SQLRNYWDN 342
>gi|20330773|gb|AAM19136.1|AC103891_16 Putative nucleotide binding protein [Oryza sativa Japonica Group]
gi|27311248|gb|AAO00694.1| Putative nucleotide binding protein [Oryza sativa Japonica Group]
gi|125585504|gb|EAZ26168.1| hypothetical protein OsJ_10034 [Oryza sativa Japonica Group]
Length = 255
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 176/249 (70%), Positives = 193/249 (77%), Gaps = 30/249 (12%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++P SNIVVGPYAG S++KE EFVKSS RA+DCPKDDRPEFA+LGRSNVGKSSLINAL+
Sbjct: 1 MVIPASNIVVGPYAGDSRVKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALI 60
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG------------------------ 96
R+KE ALTSKKPGKTQ INHFLVNKSWY+VDLPGYG
Sbjct: 61 RRKEAALTSKKPGKTQTINHFLVNKSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFA 120
Query: 97 ------FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNN 150
FA A R DWSSFTKGYFLNR++LVGVLLL+DAS+PPQKID+DCANWLGRNN
Sbjct: 121 LVFIGLFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNN 180
Query: 151 IPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM 210
I LT+VFTKCDK K KG RP+ENIK FQ+ I YP PPWIMTSSVTGLGRD LLLHM
Sbjct: 181 IGLTYVFTKCDKSKKGKGGRPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHM 240
Query: 211 SQLRNYWDQ 219
SQLRNYWD
Sbjct: 241 SQLRNYWDN 249
>gi|326490668|dbj|BAJ90001.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495488|dbj|BAJ85840.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 307
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 188/219 (85%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++PGSNIVVGPYAG +++KE EF+ S A+DCPKDDRPEFA+LGRSNVGKSSLIN+L
Sbjct: 86 MVIPGSNIVVGPYAGDARVKEAEFIGCSAHARDCPKDDRPEFAVLGRSNVGKSSLINSLT 145
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+KE ALTSKKPGKTQ INH L+NKSWY+VDLPGYGFA A RMDWSSFTKGYFLNR+
Sbjct: 146 RRKEAALTSKKPGKTQTINHHLINKSWYLVDLPGYGFAAASKTARMDWSSFTKGYFLNRD 205
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ 180
SLVGVLLL+DASVP Q+IDLDCANWLGRNN+ LTFVFTKCDK+K KG RPDENIK F +
Sbjct: 206 SLVGVLLLVDASVPTQQIDLDCANWLGRNNVGLTFVFTKCDKVKKGKGGRPDENIKEFLE 265
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I YP PPWIMTSS TGLGR+ LLLHMSQLRNYWD
Sbjct: 266 NIGSLYPRPPPWIMTSSTTGLGREGLLLHMSQLRNYWDN 304
>gi|116781116|gb|ABK21971.1| unknown [Picea sitchensis]
Length = 317
Score = 362 bits (930), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 195/221 (88%), Gaps = 2/221 (0%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
MILPGSNIVVGPYAG ++IK+VEFVKSSGRAKDCPK+ PE A++GRSNVGKSSLIN+LV
Sbjct: 97 MILPGSNIVVGPYAGDAKIKQVEFVKSSGRAKDCPKNALPEIAMMGRSNVGKSSLINSLV 156
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
RKK++A+TSK PGKTQLINHFL+NKSWYIVDLPGYG+A APD R DWS+FTKGYFLNR+
Sbjct: 157 RKKDVAMTSKTPGKTQLINHFLINKSWYIVDLPGYGYANAPDSARTDWSTFTKGYFLNRD 216
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD--KMKVAKGRRPDENIKSF 178
++V VLLLIDASVPPQK+DLDCANWLGRNNIPLTFVFTKCD K + +RP+ENIK F
Sbjct: 217 TIVTVLLLIDASVPPQKMDLDCANWLGRNNIPLTFVFTKCDKKKSGKSGVKRPEENIKEF 276
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
Q LI + Y PPWIMTSSVT LGRD+LLLH+SQLRNYWD
Sbjct: 277 QDLISKKYREPPPWIMTSSVTNLGRDDLLLHLSQLRNYWDN 317
>gi|294461092|gb|ADE76113.1| unknown [Picea sitchensis]
Length = 335
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 179/217 (82%), Gaps = 2/217 (0%)
Query: 3 LPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRK 62
L GSNIV+ PYA +QI++ EF+KSS R ++CP + PEFA++GRSNVGKSSL+N+LVR+
Sbjct: 116 LEGSNIVISPYAYDAQIEQAEFIKSSSRVEECPMNGYPEFALVGRSNVGKSSLVNSLVRR 175
Query: 63 KELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESL 122
K+LA+TSKKPGKTQLINHFL+N SWY+VDLPGYG+A AP R +W++FTK YFLNR++L
Sbjct: 176 KQLAMTSKKPGKTQLINHFLINNSWYLVDLPGYGYAIAPRAVRTEWNAFTKDYFLNRKAL 235
Query: 123 VGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD--KMKVAKGRRPDENIKSFQQ 180
V VLLLIDAS+P ++ID++CA WLG+N IP+ FVFTKCD K + +RP+ENI FQ
Sbjct: 236 VCVLLLIDASIPAKEIDIECATWLGQNQIPMAFVFTKCDKRKKRKNGNKRPEENIYDFQN 295
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LIRE Y PPWIMTSSVT GRDELLLH++QL+NYW
Sbjct: 296 LIREFYQETPPWIMTSSVTNQGRDELLLHIAQLKNYW 332
>gi|224089064|ref|XP_002308620.1| predicted protein [Populus trichocarpa]
gi|222854596|gb|EEE92143.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 175/218 (80%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA ++Q+ + EF+KSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 91 ILKGSNIVLSKYARNAQVVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 150
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R DW+ FTK YFLNR +
Sbjct: 151 RKKLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRST 210
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD--KMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P +KIDL+ A+WLG+N +P+TF+FTKCD K K G+RP+EN+ FQ
Sbjct: 211 LVSVFLLIDASIPAKKIDLEYASWLGQNQVPMTFIFTKCDKRKKKRNGGKRPEENVNEFQ 270
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+LIR + PPWIMTS VT GRDE+LLHM+QLRNYW
Sbjct: 271 ELIRGFFETAPPWIMTSGVTNQGRDEMLLHMAQLRNYW 308
>gi|242054307|ref|XP_002456299.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor]
gi|241928274|gb|EES01419.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor]
Length = 312
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 174/219 (79%), Gaps = 3/219 (1%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G +Q+ +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 91 VLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 150
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R +W FT+ YFL+RE
Sbjct: 151 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRE 210
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSF 178
+LV V LLIDAS+P +KIDLD A+WLG+N +P+T VFT K K GRRP+EN+++F
Sbjct: 211 NLVSVFLLIDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRRPEENVETF 270
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q LIRE + PPWIMTSSVT GRDE+LLHMSQLRNYW
Sbjct: 271 QSLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYW 309
>gi|449509139|ref|XP_004163505.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein At2g22870-like
[Cucumis sativus]
Length = 315
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 173/217 (79%), Gaps = 1/217 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+G YA +Q+ + +FVKSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 96 ILKGSNIVLGRYARDAQVSQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 155
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP R DW+ FT+ YFLNR +
Sbjct: 156 RKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRST 215
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD-KMKVAKGRRPDENIKSFQQ 180
LV V LLIDAS+P + IDLD A+WLG+N IP+T +FTKCD + K G+RP+EN+ FQ+
Sbjct: 216 LVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTIIFTKCDKRKKKRMGKRPEENVSDFQE 275
Query: 181 LIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LI + PPWIMTSSVT GRDE+LLH++QLRNYW
Sbjct: 276 LISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLRNYW 312
>gi|194689944|gb|ACF79056.1| unknown [Zea mays]
gi|194693496|gb|ACF80832.1| unknown [Zea mays]
gi|195626284|gb|ACG34972.1| GTP-binding protein [Zea mays]
gi|223946703|gb|ACN27435.1| unknown [Zea mays]
gi|414880639|tpg|DAA57770.1| TPA: GTP-binding protein [Zea mays]
Length = 313
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 174/219 (79%), Gaps = 3/219 (1%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G +Q+ +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 92 VLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 151
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R +W FT+ YFL+RE
Sbjct: 152 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRE 211
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSF 178
+LV V LLIDAS+P +KIDLD A+WLG+N +P+T VFT K K GR+P+EN+++F
Sbjct: 212 NLVSVFLLIDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRKPEENVETF 271
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q LIRE + PPWIMTSSVT GRDE+LLHMSQLRNYW
Sbjct: 272 QGLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYW 310
>gi|255551060|ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus communis]
gi|223544398|gb|EEF45919.1| GTP-binding protein engB, putative [Ricinus communis]
Length = 317
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA +QI + EFVKSS +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 97 ILKGSNIVLSKYARDAQIGQAEFVKSSVSTEDCPNDGLPEFALVGRSNVGKSSLLNSLVR 156
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R DW+ FTK YFLNR +
Sbjct: 157 RKKLALTSKKPGKTQCINHFRVNDSWYLVDLPGYGYAAAPQELRTDWNKFTKDYFLNRST 216
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P +KIDL+ A+WLG+N IP+T +FT K K G+RPDEN+ FQ
Sbjct: 217 LVSVFLLIDASIPAKKIDLEYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPDENVNDFQ 276
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+LIR + PPWIMTSS T GRDE+LLHM+QLRNYW
Sbjct: 277 ELIRSFFKTAPPWIMTSSTTNQGRDEMLLHMAQLRNYW 314
>gi|224141797|ref|XP_002324249.1| predicted protein [Populus trichocarpa]
gi|222865683|gb|EEF02814.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 171/218 (78%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+L GSNIV+ YA +QI + EF+KSS R +DCP D PEFA++GRSNVGKSSL+N++VR
Sbjct: 96 VLKGSNIVLSKYARDAQIVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVR 155
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R DW+ FTK YFLNR +
Sbjct: 156 RKKLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRST 215
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P +KIDL+ A+WLG+N +P+T +FT K K G+RP+EN+ FQ
Sbjct: 216 LVSVFLLIDASIPAKKIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQ 275
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+LIR+ + PPWIMTS VT GRDE+LLHM+QLRNYW
Sbjct: 276 ELIRDFFETAPPWIMTSGVTNQGRDEMLLHMAQLRNYW 313
>gi|115439749|ref|NP_001044154.1| Os01g0732200 [Oryza sativa Japonica Group]
gi|57899709|dbj|BAD87429.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113533685|dbj|BAF06068.1| Os01g0732200 [Oryza sativa Japonica Group]
gi|215695283|dbj|BAG90474.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 172/219 (78%), Gaps = 3/219 (1%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G + + +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 95 VLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 154
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R +W FT+ YFL RE
Sbjct: 155 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRE 214
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSF 178
+LV V LL+DAS+P +KIDLD A+WLG+N +P+T VFT K K G+RP+EN+++F
Sbjct: 215 NLVSVFLLVDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGKRPEENVENF 274
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q LIRE + PPWIMTSSVT GRDE+LLHMSQLRNYW
Sbjct: 275 QSLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYW 313
>gi|357466639|ref|XP_003603604.1| Ribosome biogenesis GTP-binding protein YsxC [Medicago truncatula]
gi|355492652|gb|AES73855.1| Ribosome biogenesis GTP-binding protein YsxC [Medicago truncatula]
Length = 301
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 172/218 (78%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNI++ YA +QI + +FVKSS R +DCP D PEFA++GRSNVGKSSL+N++VR
Sbjct: 81 ILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVR 140
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQLINHF VN SWY+VDLPGYG+A AP RMDW+ FTK YFLNR +
Sbjct: 141 RKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGYASAPQELRMDWAKFTKDYFLNRST 200
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P +KIDL+ A WLG N IP+T +FT K K G+RP++N+ FQ
Sbjct: 201 LVSVFLLIDASIPARKIDLEYAAWLGENKIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQ 260
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+LIR ++ PPWIMTS+VT GRDE+LLHM+QLRNYW
Sbjct: 261 ELIRGSFETVPPWIMTSNVTHQGRDEILLHMAQLRNYW 298
>gi|357136280|ref|XP_003569733.1| PREDICTED: GTP-binding protein At2g22870-like [Brachypodium
distachyon]
Length = 335
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 173/219 (78%), Gaps = 3/219 (1%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+G YA G +Q+ +FVKSS R DCP+D PEFA++GRSNVGKSSL+N++V
Sbjct: 114 VLKGSNIVLGTYARGDAQVVAADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSIV 173
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+K LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP R DW +FT+ YFL+R+
Sbjct: 174 RRKRLALTSKKPGKTQCINHFKINDSWYLVDLPGYGYASAPQEARKDWDAFTRNYFLSRD 233
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSF 178
+LV V LLIDAS+P +KIDLD A+WLG+N +P+T VFT K K GRRP+EN++ F
Sbjct: 234 NLVSVFLLIDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRRPEENVEYF 293
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q LIRE + PPWIMTSSVT GRDE+LLHMSQLRNYW
Sbjct: 294 QNLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNYW 332
>gi|356515571|ref|XP_003526472.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 293
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+L GSNI++ YA +Q+ + EFVKSS + +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 73 VLNGSNILLSNYANDAQVLQAEFVKSSVKTEDCPSDGIPEFALVGRSNVGKSSLLNSLVR 132
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP RMDW FTK YFLNR +
Sbjct: 133 RKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRST 192
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P ++IDLD A+WLG+N IP+T +FT K K G+RP++N+ FQ
Sbjct: 193 LVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQ 252
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LIR + PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 253 DLIRGFFQSVPPWIMTSSVTNQGRDEILLHMAQLRNYW 290
>gi|449437038|ref|XP_004136299.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 316
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+G YA +Q+ + +FVKSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 96 ILKGSNIVLGRYARDAQVSQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 155
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP R DW+ FT+ YFLNR +
Sbjct: 156 RKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTRDYFLNRST 215
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P + IDLD A+WLG+N IP+T +FT K K G+RP+EN+ FQ
Sbjct: 216 LVSVFLLIDASIPAKPIDLDYASWLGQNQIPMTIIFTKCDKRKKKKNGGKRPEENVSDFQ 275
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+LI + PPWIMTSSVT GRDE+LLH++QLRNYW
Sbjct: 276 ELISGFFQTTPPWIMTSSVTHQGRDEILLHIAQLRNYW 313
>gi|225430037|ref|XP_002284246.1| PREDICTED: GTP-binding protein At2g22870 [Vitis vinifera]
gi|296081893|emb|CBI20898.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA +Q+ + EFVKSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 87 ILKGSNIVLSKYANDAQVVQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 146
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP R DW+ FTK YF +R +
Sbjct: 147 RKRLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYAAAPQELRTDWNKFTKDYFQSRST 206
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LL+DAS+P +KIDL+ A+WLG N IP+T +FT K K G+RP+EN++ FQ
Sbjct: 207 LVSVFLLVDASIPAKKIDLEYASWLGENQIPMTLIFTKCDKRKKKKNGGKRPEENVEDFQ 266
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LIR+ + PPWIMTSSV+ GRDE+LLHM+QLRNYW
Sbjct: 267 GLIRDFFQTAPPWIMTSSVSNQGRDEILLHMAQLRNYW 304
>gi|356507873|ref|XP_003522687.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
Length = 293
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 168/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+L GSNI++ YA + + + EFVKSS + +DCP D EFA++GRSNVGKSSL+N+LVR
Sbjct: 73 VLNGSNILLSNYANDALVLQAEFVKSSVKTEDCPSDGLAEFALVGRSNVGKSSLLNSLVR 132
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K+LALTSKKPGKTQ INHF +N SWY+VDLPGYG+A AP RMDW FTK YFLNR +
Sbjct: 133 RKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRST 192
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LLIDAS+P ++IDLD A+WLG+N IP+T +FT K K G+RP+EN+ FQ
Sbjct: 193 LVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEENVNDFQ 252
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LIR + PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 253 DLIRGFFQSVPPWIMTSSVTNQGRDEILLHMAQLRNYW 290
>gi|297811265|ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA +Q+ + ++VKSS + +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 98 ILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVR 157
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K LALTSKKPGKTQ INHF +N WY+VDLPGYG+A AP + DW+ FTK YFLNR +
Sbjct: 158 RKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRST 217
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LL+DAS+P ++IDL+ A+WLG+N +P+T +FT K K G++P+ENIK FQ
Sbjct: 218 LVSVFLLVDASIPVKQIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEENIKEFQ 277
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LI+ + PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 278 DLIQGFFETTPPWIMTSSVTNQGRDEILLHMAQLRNYW 315
>gi|218189008|gb|EEC71435.1| hypothetical protein OsI_03633 [Oryza sativa Indica Group]
gi|222619209|gb|EEE55341.1| hypothetical protein OsJ_03357 [Oryza sativa Japonica Group]
Length = 344
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/247 (57%), Positives = 173/247 (70%), Gaps = 31/247 (12%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G + + +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 95 VLKGSNIVLGPYARGDANVIAADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 154
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG+A AP R +W FT+ YFL RE
Sbjct: 155 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRE 214
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRN----------------------------NIP 152
+LV V LL+DAS+P +KIDLD A+WLG+N N+P
Sbjct: 215 NLVSVFLLVDASIPAKKIDLDYASWLGQNKCKIQKSSQTSNYVGINLVPETPLKTSSNVP 274
Query: 153 LTFVFT--KCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM 210
+T VFT K K G+RP+EN+++FQ LIRE + PPWIMTSSVT GRDE+LLHM
Sbjct: 275 MTLVFTKCDKRKKKKNGGKRPEENVENFQSLIREYFEAAPPWIMTSSVTNQGRDEILLHM 334
Query: 211 SQLRNYW 217
SQLRNYW
Sbjct: 335 SQLRNYW 341
>gi|168013946|ref|XP_001759525.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689455|gb|EDQ75827.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 167/218 (76%), Gaps = 5/218 (2%)
Query: 5 GSNIVV--GPYAGH-SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
GSNIV+ G G + IK +F+KSS + +CP + PEFA++GRSNVGKSSLINALV
Sbjct: 3 GSNIVITAGAEVGRLALIKSADFIKSSSKESECPHEGHPEFALVGRSNVGKSSLINALVH 62
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+KELA TSKKPGKTQLINH+L+NK+WY+VDLPGYG+AKAP R DW+ FTKGYFL R++
Sbjct: 63 RKELAQTSKKPGKTQLINHYLINKTWYLVDLPGYGYAKAPTAIRTDWNEFTKGYFLKRQT 122
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK--MKVAKGRRPDENIKSFQ 179
LV VLLL+D+S+ PQ+IDLDC WLGRN IP+T VFTKCD+ K GR+P+ENIK F
Sbjct: 123 LVSVLLLVDSSIEPQQIDLDCVGWLGRNKIPVTIVFTKCDRKKKKKNGGRKPEENIKDFL 182
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
I+ Y PPWIMTSS T G++ELL H++QLR W
Sbjct: 183 DRIKPLYAETPPWIMTSSETNQGKEELLRHIAQLRILW 220
>gi|168047724|ref|XP_001776319.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672279|gb|EDQ58818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/220 (61%), Positives = 167/220 (75%), Gaps = 5/220 (2%)
Query: 3 LPGSNIVV--GPYAGH-SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINAL 59
+PGSNIV+ G G + +K EF+KSS + +CP + PEFA++GRSNVGKSSLIN+L
Sbjct: 1 MPGSNIVLTAGADVGRLALVKSAEFIKSSSKESECPSEGYPEFALVGRSNVGKSSLINSL 60
Query: 60 VRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNR 119
V +KELA TSKKPGKTQLINHFL+NK WY+VDLPGYGFAKAP R DW+ FTK YFL R
Sbjct: 61 VLRKELAQTSKKPGKTQLINHFLINKKWYLVDLPGYGFAKAPTAVRTDWNEFTKDYFLQR 120
Query: 120 ESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK--MKVAKGRRPDENIKS 177
E+L VLLL+DAS+ PQ+IDLDC +WLGRN IP+T VFTKCD+ K GR+P ENI+
Sbjct: 121 ETLACVLLLVDASIEPQQIDLDCVDWLGRNKIPVTIVFTKCDRKKKKKNGGRKPQENIED 180
Query: 178 FQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
F ++ Y PPW+MTSS T GR+ELL H++QLR +W
Sbjct: 181 FLDRLKPLYDEIPPWVMTSSATNQGREELLRHIAQLRIFW 220
>gi|21592799|gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 167/218 (76%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA +Q+ + ++VKSS + +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 98 ILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVR 157
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K LALTSKKPGKTQ INHF +N WY+VDLPGYG+A AP + DW+ FTK YFLNR +
Sbjct: 158 RKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRST 217
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LL+DAS+P + IDL+ A+WLG+N +P+T +FT K K G++P+ NIK FQ
Sbjct: 218 LVSVFLLVDASIPVKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQ 277
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LI+ + PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 278 DLIQGFFETTPPWIMTSSVTNQGRDEILLHMAQLRNYW 315
>gi|15239069|ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana]
gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana]
gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 167/218 (76%), Gaps = 2/218 (0%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA +Q+ + ++VKSS + +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 98 ILKGSNIVLSKYARDAQVVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVR 157
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRES 121
+K LALTSKKPGKTQ INHF +N WY+VDLPGYG+A AP + DW+ FTK YFLNR +
Sbjct: 158 RKRLALTSKKPGKTQCINHFRINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRST 217
Query: 122 LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQ 179
LV V LL+DAS+P + IDL+ A+WLG+N +P+T +FT K K G++P+ NIK FQ
Sbjct: 218 LVSVFLLVDASIPVKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQ 277
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
LI+ + PPWIMTSSVT GRDE+LLHM+QLRNYW
Sbjct: 278 DLIQGFFETTPPWIMTSSVTNQGRDEILLHMAQLRNYW 315
>gi|226500762|ref|NP_001140242.1| uncharacterized protein LOC100272283 [Zea mays]
gi|194698666|gb|ACF83417.1| unknown [Zea mays]
gi|414880640|tpg|DAA57771.1| TPA: hypothetical protein ZEAMMB73_007341 [Zea mays]
Length = 354
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/260 (55%), Positives = 174/260 (66%), Gaps = 44/260 (16%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G +Q+ +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 92 VLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 151
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG------------------------ 96
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG
Sbjct: 152 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGPARPFLGEIEGESRALLLQILLEW 211
Query: 97 -----------------FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
+A AP R +W FT+ YFL+RE+LV V LLIDAS+P +KID
Sbjct: 212 IWQQSPTHGLSKKLVRIYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKID 271
Query: 140 LDCANWLGRNNIPLTFVFT--KCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
LD A+WLG+N +P+T VFT K K GR+P+EN+++FQ LIRE + PPWIMTSS
Sbjct: 272 LDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRKPEENVETFQGLIREYFEAAPPWIMTSS 331
Query: 198 VTGLGRDELLLHMSQLRNYW 217
VT GRDE+LLHMSQLRNYW
Sbjct: 332 VTNQGRDEILLHMSQLRNYW 351
>gi|302819613|ref|XP_002991476.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii]
gi|300140678|gb|EFJ07398.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii]
Length = 244
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 151/218 (69%), Gaps = 3/218 (1%)
Query: 3 LPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRK 62
L GSNI V A +I VEF+KSS KDCP D PE A +GRSNVGKSSL+N L+ +
Sbjct: 25 LFGSNIHVLANASRVKINSVEFIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMER 84
Query: 63 KELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESL 122
K LAL SKKPGKTQLINHFLVNK WY+VDLPGYGFA AP + W+ FTK YFL R++L
Sbjct: 85 KSLALVSKKPGKTQLINHFLVNKRWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTL 144
Query: 123 VGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF---TKCDKMKVAKGRRPDENIKSFQ 179
V V+ LID+S+P Q+ID+DCA WL ++NIP T F + K + G+ P +N+ F
Sbjct: 145 VMVVQLIDSSIPVQQIDIDCATWLKQHNIPSTLAFTKCDRKKKKRKTGGKHPVDNVVEFL 204
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q +R PWI+TS VTG GRDEL++H+ + RNYW
Sbjct: 205 QEMRLVTTQTYPWILTSCVTGQGRDELMMHIEEFRNYW 242
>gi|302794304|ref|XP_002978916.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii]
gi|300153234|gb|EFJ19873.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii]
Length = 244
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 151/218 (69%), Gaps = 3/218 (1%)
Query: 3 LPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRK 62
L GSNI V A +I VEF+KSS KDCP D PE A +GRSNVGKSSL+N L+ +
Sbjct: 25 LFGSNIHVLGNASRVKINSVEFIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMER 84
Query: 63 KELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESL 122
K LAL SKKPGKTQLINHFLVNK WY+VDLPGYGFA AP + W+ FTK YFL R++L
Sbjct: 85 KSLALVSKKPGKTQLINHFLVNKRWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTL 144
Query: 123 VGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF---TKCDKMKVAKGRRPDENIKSFQ 179
V V+ LID+S+P Q+ID+DCA WL ++NIP T F + K + G+ P +N+ F
Sbjct: 145 VMVVQLIDSSIPVQQIDIDCATWLKQHNIPSTLAFTKCDRKKKKRKTGGKHPVDNVVEFL 204
Query: 180 QLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
Q +R PWI+TS VTG GRDEL++H+ + RNYW
Sbjct: 205 QQMRLVTTQTYPWILTSCVTGQGRDELMMHIEEFRNYW 242
>gi|449467975|ref|XP_004151697.1| PREDICTED: GTP-binding protein At2g22870-like, partial [Cucumis
sativus]
Length = 154
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/127 (83%), Positives = 115/127 (90%)
Query: 93 PGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIP 152
P FAK + RMDWSSFTKGYF+NR++LV VLLLIDASVPPQKIDLDCANWLGRNNIP
Sbjct: 28 PSRSFAKVSETARMDWSSFTKGYFMNRDTLVAVLLLIDASVPPQKIDLDCANWLGRNNIP 87
Query: 153 LTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+TFVFTKCDKMKV+KG+RPDENI+ FQQLIR+NY HP WIMTSSVTGLGRDELLLHMSQ
Sbjct: 88 MTFVFTKCDKMKVSKGKRPDENIREFQQLIRQNYKVHPSWIMTSSVTGLGRDELLLHMSQ 147
Query: 213 LRNYWDQ 219
LRNYWDQ
Sbjct: 148 LRNYWDQ 154
>gi|359496880|ref|XP_003635362.1| PREDICTED: GTP-binding protein At2g22870-like [Vitis vinifera]
Length = 160
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 112/122 (91%)
Query: 97 FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFV 156
FAKAP+ RMDWS+FTKGYFLNR +LV VLLLIDASVPPQKIDLDCANWLGRNNIP+TFV
Sbjct: 38 FAKAPESARMDWSAFTKGYFLNRATLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTFV 97
Query: 157 FTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNY 216
FTKCDKMK KG+RPDENIK+FQ ++ +NY HPPWIMTSSVTGLGRDELLLHMSQLRNY
Sbjct: 98 FTKCDKMKGGKGKRPDENIKNFQVMMGQNYGKHPPWIMTSSVTGLGRDELLLHMSQLRNY 157
Query: 217 WD 218
WD
Sbjct: 158 WD 159
>gi|302853147|ref|XP_002958090.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f.
nagariensis]
gi|300256558|gb|EFJ40821.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f.
nagariensis]
Length = 214
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 142/200 (71%), Gaps = 3/200 (1%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
+S I+ F+KSS R DCP D PEFA++GRSNVGKSSLIN+L R +LA SK+PGK
Sbjct: 10 NSNIRNAAFIKSSTRVADCPPDKLPEFALIGRSNVGKSSLINSLTRNDKLAKVSKEPGKH 69
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
LINH+L+N SWY+VDLPGYGFAKA ++ +W FTK YF+ RE+LV VLLL+D+SVPP
Sbjct: 70 HLINHYLINDSWYLVDLPGYGFAKAGKSSKEEWLKFTKDYFIERENLVSVLLLVDSSVPP 129
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPD-ENIKSFQQLIRENYPHHPPWIM 194
Q++D DCANWL +P VFTK D K + P+ +NI++F+QL+ E + P
Sbjct: 130 QEVDKDCANWLAECEVPFCIVFTKIDNRK--RDMPPNAQNIRAFKQLMAEEWEELPRCFE 187
Query: 195 TSSVTGLGRDELLLHMSQLR 214
TSS TG GR +LL +++ LR
Sbjct: 188 TSSRTGAGRSDLLGYVASLR 207
>gi|307111038|gb|EFN59273.1| hypothetical protein CHLNCDRAFT_17068, partial [Chlorella
variabilis]
Length = 205
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 145/204 (71%), Gaps = 4/204 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K EFVKSS + CP PEFA++GRSNVGKSSLIN L + LA+ SK PGKT+L
Sbjct: 4 RVKSAEFVKSSTSVEQCPPARYPEFAVIGRSNVGKSSLINMLTGRNALAMVSKTPGKTRL 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N +W++VDLPGYG+A+A + ++W+ FT+ YF+ RE+LV VLLL+D+S+PP
Sbjct: 64 INHFLINGAWFLVDLPGYGYARASKGSVVEWNRFTREYFVERETLVTVLLLVDSSIPPMP 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRP-DENIKSFQQL-IRENYPHHPPWIMT 195
+D+ CA W IP T VFTK DK K KG P D+NI +F+Q+ + + PP ++T
Sbjct: 124 LDISCAAWFAEAGIPFTVVFTKLDKRK--KGASPSDDNIAAFEQVWLGWACGYAPPTVLT 181
Query: 196 SSVTGLGRDELLLHMSQLRNYWDQ 219
SS +G GR ELL H++QLR +++
Sbjct: 182 SSKSGKGRSELLAHVAQLRELFNK 205
>gi|384245126|gb|EIE18621.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 311
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 137/202 (67%), Gaps = 1/202 (0%)
Query: 12 PYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKK 71
P A + ++K+ EFVKSS CPK PEFA++GRSNVGKSSLIN L + LA SK
Sbjct: 110 PKAQNVRVKKAEFVKSSTNMAQCPKSKLPEFAVIGRSNVGKSSLINMLTGQAALAKVSKT 169
Query: 72 PGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDA 131
PGKT INHFL+N +WY+VDLPGYG+A+ +R++WSSFTK YFL RE+L VLLL+DA
Sbjct: 170 PGKTIYINHFLINDNWYLVDLPGYGYAQRSKASRLEWSSFTKEYFLKRETLANVLLLVDA 229
Query: 132 SVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP 191
SVP Q+ DL+CA+WL +P + VFTK DK K K P EN+++FQ + + + + P
Sbjct: 230 SVPVQQADLECASWLADAQVPFSLVFTKTDKRK-KKCPSPRENMQTFQAALLKEFENLPL 288
Query: 192 WIMTSSVTGLGRDELLLHMSQL 213
T S T G ELL H++ L
Sbjct: 289 IFETDSETLKGHKELLSHVAGL 310
>gi|255087758|ref|XP_002505802.1| predicted protein [Micromonas sp. RCC299]
gi|226521072|gb|ACO67060.1| predicted protein [Micromonas sp. RCC299]
Length = 531
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K V F+++ R KDCP PE A++GRSNVGKSSL+N L +K++A TSK PGKT+ I
Sbjct: 301 VKSVRFMQACVRVKDCPPPKHPEVAVIGRSNVGKSSLVNMLTNRKDIAKTSKNPGKTRTI 360
Query: 79 NHFLV---NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
NHF + + +WY VDLPGYGFA AP+ R W+ FT+ Y L R +L+ V+LLID++V P
Sbjct: 361 NHFEMITGDGTWYFVDLPGYGFANAPEEARRKWAEFTREYLLGRPNLLSVMLLIDSTVKP 420
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCD-KMKVAKGRR--PDENIKSFQQLIRENYPHHPPW 192
Q++DL+C +LG NNIP+T VFTK D K KV G+R P+EN+++F + + E + PP
Sbjct: 421 QRLDLECLEFLGENNIPVTVVFTKVDKKRKVKSGKRANPEENVEAFCREVSEYWDELPPM 480
Query: 193 IMTSSVTGLGRDELLLHMSQLRNYWDQ 219
I TSS TG G+ +L H++ LR ++ +
Sbjct: 481 IFTSSKTGDGKQAVLNHVATLRQFFRE 507
>gi|303289114|ref|XP_003063845.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
gi|226454913|gb|EEH52218.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla
CCMP1545]
Length = 526
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 148/209 (70%), Gaps = 6/209 (2%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+ +K +++++ R +DCP + PE A++GRSNVGKSSL+N L +K++A TSK PGKTQ
Sbjct: 312 ASVKSAKYLQTCVRVQDCPPPNFPEIAVIGRSNVGKSSLVNLLTGRKDVAKTSKNPGKTQ 371
Query: 77 LINHFLV---NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASV 133
INHF + + WY+VDLPGYGFA AP+ R W+ FT+ Y L RE+L+ V+LLID++V
Sbjct: 372 TINHFEMITGDGKWYLVDLPGYGFANAPERLRKKWALFTREYLLERENLLAVMLLIDSTV 431
Query: 134 PPQKIDLDCANWLGRNNIPLTFVFTKCD-KMKVAKGRR--PDENIKSFQQLIRENYPHHP 190
PQ++DL+C +LG N+IP++ VFTK D K KV G+R P+EN+++F + + E + P
Sbjct: 432 EPQRLDLECLEFLGENDIPVSIVFTKVDKKRKVKSGKRAKPEENVEAFCREVSEYWEEMP 491
Query: 191 PWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
P I TSS TG G+ LL H++ LR ++ +
Sbjct: 492 PMIFTSSKTGDGKAALLNHVATLRQFFKE 520
>gi|302843904|ref|XP_002953493.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f.
nagariensis]
gi|300261252|gb|EFJ45466.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f.
nagariensis]
Length = 295
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 1/209 (0%)
Query: 12 PYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKK 71
P + ++K E+++S DCP PEFA++GRSNVGKSSLIN L +K+LAL SK+
Sbjct: 75 PNPTNVKVKTAEYLQSCVTVSDCPTPRFPEFAVIGRSNVGKSSLINMLTGRKDLALVSKQ 134
Query: 72 PGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDA 131
PGKT+ INHFL+N SWY VDLPGYGFAK R + +FT+ YF R +L V LL+DA
Sbjct: 135 PGKTKCINHFLINGSWYFVDLPGYGFAKVGVQGRQQFDTFTREYFKTRPNLAMVFLLVDA 194
Query: 132 SVPPQKIDLDCANWLGRNNIPLTFVFTKCDK-MKVAKGRRPDENIKSFQQLIRENYPHHP 190
S+PPQKIDL+ ANWL N +P T VFTK DK K D ++ +F++ + ++ P
Sbjct: 195 SIPPQKIDLEYANWLTDNEVPFTLVFTKVDKRRKGVSSSACDSHVTAFKRALLQDLAFLP 254
Query: 191 PWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
P ++TS GLGR E+L +++LR +++
Sbjct: 255 PSVLTSCAKGLGRGEMLNFIARLRVAFEK 283
>gi|159477681|ref|XP_001696937.1| hypothetical protein CHLREDRAFT_105231 [Chlamydomonas reinhardtii]
gi|158274849|gb|EDP00629.1| predicted protein [Chlamydomonas reinhardtii]
Length = 214
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 8/206 (3%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
+S +K+ F+KSS R DCP D PEFA +GRSNVGKSSLIN+L LA SK+PG T
Sbjct: 1 NSNVKKSAFIKSSTRVADCPPDRIPEFAFIGRSNVGKSSLINSLTNNDRLAKVSKEPGMT 60
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
+LINH+L+N SWY+VDLPGYGFAKA R +W FTK YF+ R++LV V+LL+D+S+PP
Sbjct: 61 KLINHYLINDSWYLVDLPGYGFAKAGKSNREEWLRFTKDYFITRDNLVSVMLLVDSSLPP 120
Query: 136 Q-------KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH 188
Q +D DCA+WL +P VFTK D K N+K+F+Q++ E +
Sbjct: 121 QASGPGWRTVDRDCADWLAECEVPFCIVFTKIDNRKKDMPTNA-ANVKAFKQMMAEEWEA 179
Query: 189 HPPWIMTSSVTGLGRDELLLHMSQLR 214
P TSS TG G+ ELL +++ LR
Sbjct: 180 LPRCFETSSKTGTGKSELLGYLASLR 205
>gi|145356924|ref|XP_001422673.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582916|gb|ABP00990.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 253
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 143/209 (68%), Gaps = 6/209 (2%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+ +K EFV++ CPK PE A++GRSNVGKSSL+N L +K LA TSK PGKTQ
Sbjct: 7 ANVKSCEFVQACVDLAGCPKPTLPEIAVIGRSNVGKSSLVNMLTNRKSLAKTSKNPGKTQ 66
Query: 77 LINHFLV---NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASV 133
INH+ + + +Y+VDLPGYG+A AP+ R W++FT+ Y + RESL+ VLLLID++V
Sbjct: 67 TINHYRMTTGDGKFYLVDLPGYGYANAPEDLREKWAAFTREYLIKRESLITVLLLIDSTV 126
Query: 134 PPQKIDLDCANWLGRNNIPLTFVFTKCDKM-KVAKGRR--PDENIKSFQQLIRENYPHHP 190
PQ++DL+C +WLG +P+T VFTK DK KV G+R P EN++ F + + E + P
Sbjct: 127 KPQRLDLECLDWLGEAGVPVTVVFTKVDKRKKVGAGKRANPAENVEEFCREVSEYWDELP 186
Query: 191 PWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
P + TSSV G G+ E+L H++ LR ++ +
Sbjct: 187 PMLYTSSVNGEGKREVLNHIATLRQFFKK 215
>gi|159477825|ref|XP_001697009.1| hypothetical protein CHLREDRAFT_150723 [Chlamydomonas reinhardtii]
gi|158274921|gb|EDP00701.1| predicted protein [Chlamydomonas reinhardtii]
Length = 276
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 142/205 (69%), Gaps = 5/205 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K E+++S DCP PEFA++GRSNVGKSSLIN + +K+LAL SK+PGKT+
Sbjct: 62 KVKAAEYMQSCVTVADCPPPRYPEFAVIGRSNVGKSSLINMITGRKDLALVSKEPGKTKC 121
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N++WY+VDLPGYGFAK R + +FTK YF R +L VLLL+DAS+ PQ+
Sbjct: 122 INHFIINENWYLVDLPGYGFAKVGFQGRQQFDTFTKEYFNTRPNLAMVLLLVDASIKPQR 181
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK---VAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
IDL+ ANWL N +P T VFTK DK + A R D ++ +F++ + ++ + PP ++
Sbjct: 182 IDLEYANWLTDNEVPFTIVFTKADKRRKGLTAAVR--DSHVTAFKRALLQDLAYLPPSLL 239
Query: 195 TSSVTGLGRDELLLHMSQLRNYWDQ 219
TS+ GLGR ELL ++ LR +++
Sbjct: 240 TSAAKGLGRGELLSFIAGLRVAYER 264
>gi|423345682|ref|ZP_17323371.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL03T12C32]
gi|409221417|gb|EKN14366.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL03T12C32]
Length = 198
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ K CP D PE+A +GRSNVGKSSLIN L KK LA+TS+KPGKT L
Sbjct: 2 EIKSAEFVISNTNVKKCPTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + + Y L RE L + +LID PQK
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK D K++KGR EN+K +Q + E++ PP +++SS
Sbjct: 122 IDLEFMEWLGENEIPFSLIFTKID--KISKGRL-QENLKVYQTKLLESWEELPPILLSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 179 EKKEGRDEILNYIDEI 194
>gi|218261711|ref|ZP_03476446.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii
DSM 18315]
gi|218223845|gb|EEC96495.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii
DSM 18315]
Length = 198
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 130/196 (66%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ K CP + PE+A +GRSNVGKSSLIN L KK LA+TS+KPGKT L
Sbjct: 2 EIKSAEFVISNTNVKKCPAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + + Y L RE L + +LID PQK
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK D K++KGR EN+K++Q + E++ PP +++SS
Sbjct: 122 IDLEFMEWLGENGIPFSLIFTKID--KISKGRL-QENLKAYQTKLLESWEELPPILLSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 179 EKKEGRDEILDYIDEI 194
>gi|124005837|ref|ZP_01690675.1| GTP-binding protein [Microscilla marina ATCC 23134]
gi|123988520|gb|EAY28161.1| GTP-binding protein [Microscilla marina ATCC 23134]
Length = 200
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K EF+KSS CP +PE+A +GRSNVGKSSLIN L +K LA TS+ PGKTQ
Sbjct: 2 EVKSAEFIKSSTDYTQCPAVHQPEYAFIGRSNVGKSSLINKLTNRKSLAKTSQNPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N W++VDLPGYG+AKA R W Y L RE L+G+ +LIDA PQK
Sbjct: 62 INHFLINDRWHLVDLPGYGYAKASKTERKKWGKMINDYILKREVLLGIFVLIDARHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG +P T VFTK DK+ + + P + I S+++ I + P +TSS
Sbjct: 122 IDLEFLEWLGEERVPFTMVFTKSDKL--SSNKLP-QAIASYRKAILRTWEEMPTHFVTSS 178
Query: 198 VTGLGRDELL 207
V+GLG DE+L
Sbjct: 179 VSGLGCDEIL 188
>gi|412985399|emb|CCO18845.1| ribosome biogenesis GTP-binding protein YsxC [Bathycoccus prasinos]
Length = 352
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 6/209 (2%)
Query: 14 AGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPG 73
A + IK V+F+ S R +DCP+ PE A +GRSNVGKSSL+N L +K +A SK PG
Sbjct: 124 AKAATIKSVKFISSVVRHQDCPQTKLPEVAFIGRSNVGKSSLVNMLTNRKNVAKVSKNPG 183
Query: 74 KTQLINHFLV---NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLID 130
KTQ INH+ + + W++VDLPGYGFA AP+ + +W+ FT+ Y L R++L+ V+LL+D
Sbjct: 184 KTQTINHYEITTGDGKWFLVDLPGYGFANAPEHLKKEWAKFTREYLLERKNLISVMLLVD 243
Query: 131 ASVPPQKIDLDCANWLGRNNIPLTFVFTKCD---KMKVAKGRRPDENIKSFQQLIRENYP 187
++V PQ++DLD +L N+IP T VFTK D K K K P E++ F I E +
Sbjct: 244 STVKPQQLDLDALEFLAENDIPATVVFTKADKKRKAKGGKRATPAEHVDMFADEISEMFE 303
Query: 188 HHPPWIMTSSVTGLGRDELLLHMSQLRNY 216
PP++ TS+ +G G+ ELL H++ +R +
Sbjct: 304 ELPPFVFTSANSGEGKKELLNHIATIREF 332
>gi|303291125|ref|XP_003064849.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453875|gb|EEH51183.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 196
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 129/197 (65%), Gaps = 2/197 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPK-DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
++++V+FV ++ A DCP D PE A++GRSNVGKSSL+N L AL S KPG TQ
Sbjct: 1 KMRKVQFVSATEDADDCPAPDGLPEVALIGRSNVGKSSLLNLLTEGASGALVSSKPGTTQ 60
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
INH+LVN W+IVDLPGYG+A+A + W +FTK YF+ R +L GVLLLIDASVPPQ
Sbjct: 61 RINHYLVNHKWWIVDLPGYGYAEATEDETAKWEAFTKDYFVTRSNLAGVLLLIDASVPPQ 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D + A+WL NN+P T VFTKCD+ K +EN F+ + E + P I TS
Sbjct: 121 AKDAEYADWLIENNVPFTIVFTKCDRDKPGMPSV-EENKAEFEARLEERWHRSPSMIPTS 179
Query: 197 SVTGLGRDELLLHMSQL 213
SV GR+++L +S +
Sbjct: 180 SVNADGREDVLKFISSI 196
>gi|154492901|ref|ZP_02032527.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC
43184]
gi|423723453|ref|ZP_17697602.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL09T00C40]
gi|154087206|gb|EDN86251.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae ATCC 43184]
gi|409241163|gb|EKN33933.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
merdae CL09T00C40]
Length = 198
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ K CP D PE+A +GRSNVGKSSLIN L KK LA+TS+KPGKT L
Sbjct: 2 EIKSAEFVISNTNVKKCPTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + + Y L RE L + +LID PQK
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK D K++KGR EN+K +Q + E++ PP +++SS
Sbjct: 122 IDLEFMEWLGENEIPFSLIFTKID--KISKGRL-QENLKVYQTKLLESWEELPPILLSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRD++L ++ ++
Sbjct: 179 EKKEGRDKILNYIDEI 194
>gi|423343472|ref|ZP_17321185.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
johnsonii CL02T12C29]
gi|409215169|gb|EKN08175.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
johnsonii CL02T12C29]
Length = 198
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 130/196 (66%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ K CP + PE+A +GRSNVGKSSLIN L KK LA+TS+KPGKT L
Sbjct: 2 EIKSAEFVISNTNVKKCPAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + + Y L RE L + +LID PQK
Sbjct: 62 INHFLINGQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG + IP + +FTK D K++KGR EN+K++Q + E++ PP +++SS
Sbjct: 122 IDLEFMEWLGESGIPFSLIFTKID--KISKGRL-QENLKAYQTKLLESWEELPPILLSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 179 EKKEGRDEILDYIDEI 194
>gi|256819259|ref|YP_003140538.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea DSM 7271]
gi|256580842|gb|ACU91977.1| GTP-binding protein HSR1-related [Capnocytophaga ochracea DSM 7271]
Length = 200
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPKD+ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKDNLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLAIER---NIAAYQQVLLETWEEFPPYFITSAE 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
G++EL ++ Q+ D
Sbjct: 179 NKTGKEELTHYIEQINKSID 198
>gi|333030034|ref|ZP_08458095.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011]
gi|332740631|gb|EGJ71113.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011]
Length = 200
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I FV S+ K CP D PE+A +GRSNVGKSSLIN L +K LA+TS KPGKT L
Sbjct: 2 HINSANFVISNTEVKKCPTDGLPEYAFIGRSNVGKSSLINMLTNRKGLAMTSAKPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N+ WYIVDLPGYG+AK + + + Y L R ++ + +LID + PQ+
Sbjct: 62 INHFLINEEWYIVDLPGYGYAKRNQKGQQQIKTIIEDYILERTAMTNLFVLIDCRLSPQQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG NNIP + VFTK DK+ K D N+++F +++ + PP+ +TSS
Sbjct: 122 IDLEFIEWLGENNIPFSIVFTKGDKLTKNK---LDSNVEAFLNELKKQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GRDE+L ++ Q+
Sbjct: 179 EKRMGRDEMLNYIEQI 194
>gi|393780146|ref|ZP_10368370.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
gi|392608962|gb|EIW91789.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 412 str. F0487]
Length = 199
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDSSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG ++IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLAIER---NIAAYQQVLLETWEEFPPYFITSAE 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
G++EL ++ Q+ D
Sbjct: 179 NKTGKEELTHYIEQINKSID 198
>gi|379729042|ref|YP_005321238.1| GTP-binding protein HSR1-like protein [Saprospira grandis str.
Lewin]
gi|378574653|gb|AFC23654.1| GTP-binding protein HSR1-related protein [Saprospira grandis str.
Lewin]
Length = 202
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 126/189 (66%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK E++ S + + P DRPE+A +GRSNVGKSSLIN L +LALTS +PGKT++I
Sbjct: 3 IKTAEYLISVPKVEMAPHSDRPEYAFIGRSNVGKSSLINMLTDHSKLALTSGRPGKTRMI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N+F +NK WY+VDLPGYG+A+ R +W + YFL R S+ LLID+ VPPQ I
Sbjct: 63 NYFNINKDWYLVDLPGYGYAQTGKQRRQNWRKMIEEYFLLRISMQCAFLLIDSGVPPQDI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ ANWLG N IP VFTK DK K +G D +I++F+Q + E + PP ++S+
Sbjct: 123 DIEFANWLGENQIPFVIVFTKTDKKKARQG---DNHIRAFKQKLGEYWEQLPPCYLSSAE 179
Query: 199 TGLGRDELL 207
T GR+ELL
Sbjct: 180 TKRGREELL 188
>gi|315224700|ref|ZP_07866523.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|420160119|ref|ZP_14666908.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
gi|314945328|gb|EFS97354.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea F0287]
gi|394761107|gb|EJF43544.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
ochracea str. Holt 25]
Length = 201
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG ++IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHSIPFAIVFTKADKLKPLAIER---NIAAYQQVLLETWEEFPPYFVTSAE 178
Query: 199 TGLGRDELLLHMSQL 213
G++EL ++ Q+
Sbjct: 179 NKTGKEELTHYIEQI 193
>gi|359497226|ref|XP_002264972.2| PREDICTED: GTP-binding protein At2g22870, partial [Vitis vinifera]
Length = 213
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/96 (93%), Positives = 94/96 (97%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GPYAGH+QIKEVEFVKSS R KDCPKDDRPEFAILGRSNVGKSSLINALV
Sbjct: 98 MVLPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALV 157
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYG
Sbjct: 158 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 193
>gi|228473700|ref|ZP_04058448.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
gingivalis ATCC 33624]
gi|228274847|gb|EEK13664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
gingivalis ATCC 33624]
Length = 200
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ FV S+ + CP PE+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 EIKQAAFVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK WY+VDLPGYG+AK ++ + F YF R LV +L+D PQK
Sbjct: 62 INHFLINKEWYLVDLPGYGYAKVSKQSKKTFQQFITDYFKKRRELVNAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP VFTK DK+ ++ E++ S+ +++ + + PP+ +TSS
Sbjct: 122 IDLEFMQWLGENAIPFAIVFTKADKL---TEKQIQEHVTSYSEILLQQWEEMPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LG+++LL ++ +
Sbjct: 179 ENRLGKEDLLSYIETI 194
>gi|429755348|ref|ZP_19288008.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
gi|429174876|gb|EKY16341.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 324 str. F0483]
Length = 201
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLAIER---NIAAYQQVLLETWEEFPPYFITSAE 178
Query: 199 TGLGRDELLLHMSQL 213
G++EL ++ Q+
Sbjct: 179 NKTGKEELTHYIEQI 193
>gi|319902362|ref|YP_004162090.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
helcogenes P 36-108]
gi|319417393|gb|ADV44504.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
helcogenes P 36-108]
Length = 201
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L K LA+TS PGKT L
Sbjct: 2 EISNAEFVISNTDVKKCPPGTFPEYAFIGRSNVGKSSLINMLTNHKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+AK + + + Y L RE + + +L+D+ + PQ
Sbjct: 62 INHFLINKNWYLVDLPGYGYAKRGQKGQEQIQNIIRSYILQREQMTNLFVLVDSRLEPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD WLG N +P VFTK DKM KG R + NI+ + + + E + PP+ +TSS
Sbjct: 122 IDLDFIEWLGENGVPFAIVFTKGDKM---KGGRLNANIRQYLKKLEEQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR+ELL ++ ++
Sbjct: 179 ENRMGREELLDYIEKI 194
>gi|213963255|ref|ZP_03391512.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
gi|213954117|gb|EEB65442.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga
sputigena Capno]
Length = 201
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLVIER---NIAAYQQVLLETWEEFPPYFVTSAE 178
Query: 199 TGLGRDELLLHMSQL 213
G++EL ++ Q+
Sbjct: 179 NKTGKEELTHYIEQI 193
>gi|429748081|ref|ZP_19281298.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
gi|429161414|gb|EKY03819.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 380 str. F0488]
Length = 199
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAVVFTKADKLKPLVIER---NIAAYQQVLLETWEEFPPYFVTSAE 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
G++EL ++ Q+ D
Sbjct: 179 NKTGKEELTHYIEQINKSID 198
>gi|357060079|ref|ZP_09120853.1| GTP-binding protein engB [Alloprevotella rava F0323]
gi|355376969|gb|EHG24209.1| GTP-binding protein engB [Alloprevotella rava F0323]
Length = 204
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF S+ RA CPK + PE+A +GRSNVGKSSLIN L ++K LA+TS PGKT L
Sbjct: 2 KINSAEFEISNSRADQCPKSNIPEYAFIGRSNVGKSSLINMLTQRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N WY+VDLPGYG+AK + + Y L RE L + +LID+ + PQK
Sbjct: 62 INHFRINDEWYLVDLPGYGYAKRSKKDQEKLQNIISFYVLEREQLTNLFVLIDSRLKPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK DK K + R+ N+++F +RE + PP +TSS
Sbjct: 122 IDLEFIEWLGENGVPFSIIFTKADKNKKGELRK---NVETFLDTLREQWEELPPHFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+ LGR+ELL ++ +
Sbjct: 179 ESRLGREELLNYIDNI 194
>gi|229496828|ref|ZP_04390537.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
endodontalis ATCC 35406]
gi|229316239|gb|EEN82163.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
endodontalis ATCC 35406]
Length = 198
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFVKSS + CP+ PE+A +GRSNVGKSSLIN L +LA+TS KPGKTQLI
Sbjct: 3 IKTAEFVKSSAQLDQCPESKLPEYAFIGRSNVGKSSLINMLTGHTKLAMTSSKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NK W++VDLPGYG+A R+ + +GY L R+ L+ + +L+D+ + PQKI
Sbjct: 63 NHFLINKDWHLVDLPGYGYAARNKEQRLAFRRMIEGYILGRKQLINLFILVDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ +G +PL+ V TK DK+ K + E+IK +Q+ + E + PP+ TSS
Sbjct: 123 DLEFIQQMGEAGVPLSIVMTKIDKLSRPKLQ---ESIKRYQETLSEEWDELPPFFYTSSE 179
Query: 199 TGLGRDELLLHMSQLRN 215
GR+ELL ++ + +
Sbjct: 180 KATGREELLQYIETINH 196
>gi|424843007|ref|ZP_18267632.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Saprospira
grandis DSM 2844]
gi|395321205|gb|EJF54126.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Saprospira
grandis DSM 2844]
Length = 202
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 124/189 (65%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK E++ S + + P DRPE+A +GRSNVGKSSLIN L +LALTS +PGKT++I
Sbjct: 3 IKTAEYLISVPKVEMAPNSDRPEYAFIGRSNVGKSSLINMLTGHSKLALTSGRPGKTRMI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N+F +NK WY+VDLPGYG+A+ R W + YFL R S+ LLID+ VPPQ I
Sbjct: 63 NYFDINKEWYLVDLPGYGYAQTGKQRRQTWRKMIEEYFLLRISMQCAFLLIDSGVPPQDI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ ANWLG N IP VFTK DK K +G D I++F+Q + E + PP ++S+
Sbjct: 123 DIEFANWLGENQIPFVVVFTKTDKKKARQG---DNYIRAFKQKLGEYWEQLPPCYLSSAE 179
Query: 199 TGLGRDELL 207
T GR+ELL
Sbjct: 180 TKRGREELL 188
>gi|327404186|ref|YP_004345024.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823]
gi|327319694|gb|AEA44186.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823]
Length = 204
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IKE +F+ S+ K CP D +PE+A +GRSNVGKSSLIN LV KK++A TS +PGKTQLI
Sbjct: 3 IKEAKFIISNTDIKLCPTDGKPEYAFIGRSNVGKSSLINMLVEKKDMAKTSGRPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+AKA +R W F + RE+L+ +LID+ + PQKI
Sbjct: 63 NHFLINNEWYLVDLPGYGYAKASKSSRNQWEKFISQFLTRRETLINTFVLIDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ +W +P + VFTK DK+ + ++ N+ ++++ + + + PP TSS
Sbjct: 123 DIEFMSWCAEEQLPFSIVFTKIDKLSSSALQK---NLAAYKKEMLKYWEALPPVFTTSSE 179
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
+ GR+++L ++ Q+ W +
Sbjct: 180 SHFGREKILNYIDQINLDWHE 200
>gi|167762858|ref|ZP_02434985.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC
43183]
gi|167699198|gb|EDS15777.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides stercoris
ATCC 43183]
Length = 202
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WYIVDLPGYG+AK + + Y L RE + + +L+D+ PQ
Sbjct: 62 INHFLINKNWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTCLFVLVDSRHEPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL WLG N +P VFTK DK+ KG R + NI+ + + +RE + PP +TSS
Sbjct: 122 IDLAFIEWLGENGVPFAIVFTKADKL---KGGRINSNIRHYLEKLREQWEELPPHFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GRDELL ++ Q+
Sbjct: 179 ENRMGRDELLGYIEQI 194
>gi|294673629|ref|YP_003574245.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola
23]
gi|294471615|gb|ADE81004.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola
23]
Length = 200
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF S+ CPKD +PE+A +GRSNVGKSSLIN L KK LA TS PGKT L
Sbjct: 2 EIKKAEFTLSAPMESMCPKDTKPEYAFIGRSNVGKSSLINMLTGKKNLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK GY L RE LV V LLID + QK
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKKEVQKLEQMINGYILQREQLVNVFLLIDIRLEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ W+G +++P +FTK DK+ +K +N+ ++++++ E + PP +TSS
Sbjct: 122 IDLEFMEWMGTSSVPFAIIFTKADKLSASKVL---QNLNAYKKVLSETWEELPPIFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ Q+
Sbjct: 179 EKKQGRDEVLDYIEQI 194
>gi|326335701|ref|ZP_08201887.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325692130|gb|EGD34083.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 200
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I++ FV S+ + CP E+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 EIRQASFVMSNTQIAKCPAHGLAEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ ++ + F YF R+ LV +L+D PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYAQVSKQSKRVFQQFITDYFKKRKELVCAFVLVDIRHKPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP +FTK DK+ + +E+I ++Q ++ E + PP+ ++SS
Sbjct: 122 IDLEFMQWLGENTIPFAIIFTKADKL---TDKLIEEHITAYQGILLEQWEEMPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
V LGR E+L ++ + N
Sbjct: 179 VNKLGRTEILNYIEDINN 196
>gi|420149698|ref|ZP_14656869.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
gi|394753289|gb|EJF36857.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 335 str. F0486]
Length = 199
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K R NI ++QQ++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLVIER---NIVAYQQVLLETWEDFPPYFITSAE 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
G++EL ++ Q+ D
Sbjct: 179 NKTGKEELTHYIEQINKSID 198
>gi|313203549|ref|YP_004042206.1| ribosome biogenesis GTP-binding protein ysxc [Paludibacter
propionicigenes WB4]
gi|312442865|gb|ADQ79221.1| ribosome biogenesis GTP-binding protein YsxC [Paludibacter
propionicigenes WB4]
Length = 198
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 122/189 (64%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF+ S+ CP PE+A +GRSNVGKSSLIN L +K+LA+TS +PGKT LI
Sbjct: 3 IKSAEFIISNTDYLKCPDSKLPEYAFIGRSNVGKSSLINMLCNRKDLAMTSSRPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NK+W++VDLPGYG+A A R + Y LNRE L + LLID PQKI
Sbjct: 63 NHFLINKNWHLVDLPGYGYATAGKKMRDQLQDIIESYILNREQLTCLFLLIDCRHEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N +P + VFTK DK+ AKG+ N+++++ + E + PP +TSS
Sbjct: 123 DLEFMEWLGENGVPFSIVFTKLDKLTHAKGK---SNVQAYKDKLSEQWEELPPIFLTSSE 179
Query: 199 TGLGRDELL 207
GRDE+L
Sbjct: 180 KRTGRDEIL 188
>gi|329955112|ref|ZP_08296093.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus
YIT 12056]
gi|328526402|gb|EGF53417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus
YIT 12056]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITNAEFVISNTDVTKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NKSWYIVDLPGYG+AK + + Y L RE + + +L+D+ PQ
Sbjct: 62 INHFLINKSWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTNLFVLVDSRHEPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL WLG N +P VFTK DK+ KG R + NI+ + + + E + PP+ +TSS
Sbjct: 122 IDLAFIEWLGENGVPFAIVFTKADKL---KGGRINSNIRHYLEKLHEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GRDELL ++ Q+
Sbjct: 179 ENRMGRDELLGYIEQI 194
>gi|429750902|ref|ZP_19283901.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429163663|gb|EKY05866.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 200
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 127/195 (65%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK+ PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVAKCPKEPLPEYAFIGRSNVGKSSLINMLTNQKNLAKTSARPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF +N W++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKINDQWFLVDLPGYGYARVSKTTKKTFQKFITNYFEQRKQLVCAFVLVDIRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N +P VFTK DK+K R NI ++Q+++ +++ PP+ +TS+
Sbjct: 122 DLEFMQWLGENAVPFAIVFTKADKLKPLAIER---NIATYQEILLKSWEAMPPYFVTSAE 178
Query: 199 TGLGRDELLLHMSQL 213
+G++EL+ ++ +
Sbjct: 179 NYIGKEELVGYIEDI 193
>gi|255082732|ref|XP_002504352.1| predicted protein [Micromonas sp. RCC299]
gi|226519620|gb|ACO65610.1| predicted protein [Micromonas sp. RCC299]
Length = 195
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 130/196 (66%), Gaps = 2/196 (1%)
Query: 19 IKEVEFVKSSGRAKDCPK-DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++VEFV ++ A DCP D PE A++GRSNVGKSSL+N L + K AL S KPG TQ
Sbjct: 1 MQKVEFVSATEDADDCPPPDGLPEVAVIGRSNVGKSSLLNLLTKGKSGALVSSKPGTTQH 60
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INH+LV K W+IVDLPGYGFAKA + W FTK YF R +L GVLLLIDAS+PP +
Sbjct: 61 INHYLVAKKWWIVDLPGYGFAKASKESTEMWDRFTKEYFTTRSNLAGVLLLIDASIPPME 120
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL+ A+WL +N+P T V TKCD+ K D NI ++++ E + P I TSS
Sbjct: 121 KDLEYADWLITHNVPFTIVHTKCDRNKPGMPAV-DTNIDELRRILDEKWHRLPSMISTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
V+ GR+++L +S +
Sbjct: 180 VSHDGREDVLKFISSI 195
>gi|297742908|emb|CBI35744.3| unnamed protein product [Vitis vinifera]
Length = 96
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/96 (93%), Positives = 94/96 (97%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M+LPGSNIV+GPYAGH+QIKEVEFVKSS R KDCPKDDRPEFAILGRSNVGKSSLINALV
Sbjct: 1 MVLPGSNIVLGPYAGHAQIKEVEFVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALV 60
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYG
Sbjct: 61 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
>gi|429741972|ref|ZP_19275619.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
catoniae F0037]
gi|429157613|gb|EKY00194.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
catoniae F0037]
Length = 198
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV S+ R + CP PE+A +GRSNVGKSSLIN L +K LA+TS+KPGKTQLI
Sbjct: 3 IKSAEFVVSNSRVEKCPTTGLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK W++VDLPGYG+A+ R + Y L R LV + +L+DA + PQKI
Sbjct: 63 NHFIINKEWHLVDLPGYGYARLSKDGRDGLRRMIEDYVLERRELVCLFVLLDARLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG ++P VFTK DK+ +KG+ NI ++++ + E + PP +TSS
Sbjct: 123 DLEFIEWLGEESVPFALVFTKADKL--SKGKL-SANISAYKERLLEGWEELPPLFITSSE 179
Query: 199 TGLGRDELLLHMSQLRN 215
GRDELL ++ + N
Sbjct: 180 ARTGRDELLDYIEGINN 196
>gi|325280017|ref|YP_004252559.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712]
gi|324311826|gb|ADY32379.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + EFV S+ + CPK DR E+A +GRSNVGKSSLIN L K+LA T+ +PGKTQLI
Sbjct: 7 IVKAEFVVSNATVEKCPKPDRHEYAFIGRSNVGKSSLINMLTNNKKLAKTAARPGKTQLI 66
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+A+ + R + + Y L RE+LV + +LID+ + PQKI
Sbjct: 67 NHFLINDMWYMVDLPGYGYARTSETARRQFEKMIRDYILKRENLVCLFVLIDSRLEPQKI 126
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N +P +FTK DK+ + + I + +++ E + P MTSS
Sbjct: 127 DLEFMEWLGENGVPFVMIFTKADKLSATQRLKC---IDDYHKVMLETWETTPMAFMTSSE 183
Query: 199 TGLGRDELLLHMSQL 213
LGR+E+L ++ +L
Sbjct: 184 KRLGREEVLDYIDEL 198
>gi|313887114|ref|ZP_07820810.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
asaccharolytica PR426713P-I]
gi|332300425|ref|YP_004442346.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707]
gi|312923343|gb|EFR34156.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
asaccharolytica PR426713P-I]
gi|332177488|gb|AEE13178.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707]
Length = 203
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 127/195 (65%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I FV+SS K CP+ PE+A +GRSNVGKSSLIN L K LA+TS+KPGKTQLI
Sbjct: 3 IHSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N+SW++VDLPGYG+A+ R + Y RE+LV + +L+D PQ+I
Sbjct: 63 NHFLINESWHLVDLPGYGYARRSLEQREQFRKLIDQYVTKREALVNLFVLVDIRHEPQRI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ N +G IP + VFTK DK+ R + ++++Q + E++ PP +TS+
Sbjct: 123 DLEFINEMGEKGIPFSIVFTKADKIGKQVQR---DAVEAYQSRLLEDWEELPPLFVTSAS 179
Query: 199 TGLGRDELLLHMSQL 213
TGLGRDELL ++ QL
Sbjct: 180 TGLGRDELLDYIEQL 194
>gi|402847326|ref|ZP_10895621.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas sp.
oral taxon 279 str. F0450]
gi|402266639|gb|EJU16060.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas sp.
oral taxon 279 str. F0450]
Length = 198
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV S+ R + CP PE+A +GRSNVGKSSLIN L +K LA+TS+KPGKTQLI
Sbjct: 3 IKSAEFVISNSRVEKCPTTGLPEYAFIGRSNVGKSSLINMLTARKGLAMTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N +WY+VDLPGYG+A+ +R + Y L R+ LV + +L+D PQKI
Sbjct: 63 NHFIINDAWYLVDLPGYGYARLGKDSRDSLRRMIEDYILERKELVLLFVLLDCRHEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG +P VFTK DK+ +KGR N+++++ + E + PP +TSS
Sbjct: 123 DLEFIQWLGEEGVPFALVFTKADKL--SKGRLA-ANVEAYKAKLHEEWEELPPIFVTSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+GRDELL ++ ++
Sbjct: 180 ERMGRDELLGYIEEI 194
>gi|149278824|ref|ZP_01884959.1| GTPase EngB [Pedobacter sp. BAL39]
gi|149230443|gb|EDM35827.1| GTPase EngB [Pedobacter sp. BAL39]
Length = 209
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK F+ S+ + P + PE+A +GRSNVGKSSLIN LV + LA TS++PGKTQLI
Sbjct: 3 IKSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N+ WYIVDLPGYG+AK +R W F + Y RESL V +LID+ + PQKI
Sbjct: 63 NHFLINEKWYIVDLPGYGYAKVSKNSREKWEKFIRNYITKRESLQCVFVLIDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W+G IP +FTK DK K D+N+ +F++ + + PP+ +TS+
Sbjct: 123 DLEFCCWMGEIQIPFALIFTKADKQSKVK---TDQNVAAFKKALGGWFEEIPPYFVTSAE 179
Query: 199 TGLGRDELLLHMSQL 213
LGRDE+L +S +
Sbjct: 180 KALGRDEVLKFISDV 194
>gi|317502810|ref|ZP_07960914.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae
DSM 15606]
gi|315666082|gb|EFV05645.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae
DSM 15606]
Length = 198
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ CPKDD+PE+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFVISAPTVSMCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK + Y L R+ +V V +LID QK
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQMVNVFVLIDIRHEQQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG +N+P T VFTK DK+ K + +N + + +++ + PP+ +TSS
Sbjct: 122 IDREFIDWLGESNVPFTIVFTKADKLGAGKAK---QNAQKWMNQLKDRWETLPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGRDELL ++ ++
Sbjct: 179 EKKLGRDELLDYIDEI 194
>gi|338210190|ref|YP_004654237.1| GTP-binding protein engB [Runella slithyformis DSM 19594]
gi|336304003|gb|AEI47105.1| GTP-binding protein engB [Runella slithyformis DSM 19594]
Length = 199
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 127/202 (62%), Gaps = 7/202 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FVKSS + CPK DRPE+A +GRSNVGKSSLINAL +++LA TS KPGKTQ+
Sbjct: 2 KIKTSVFVKSSATNEQCPKPDRPEYAFIGRSNVGKSSLINALTERRDLAKTSSKPGKTQV 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYG+AK R W Y RE+LV +LID+ + PQK
Sbjct: 62 INHFLINDMWYLVDLPGYGYAKVSQTDRKAWGEMITNYLFKRENLVCTFVLIDSRIEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL+ LG N +P +FTK DK+ + + + ++++ + E + P +TSS
Sbjct: 122 VDLEFMEKLGSNGVPFALIFTKTDKLTATQLQ---TQLTNYKKTLLETWDELPLTFVTSS 178
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
V+ GR ++L + + W+Q
Sbjct: 179 VSKQGRLDVLKQIEE----WNQ 196
>gi|120437113|ref|YP_862799.1| ribosome biogenesis GTP-binding protein YsxC [Gramella forsetii
KT0803]
gi|166225957|sp|A0M537.1|ENGB_GRAFK RecName: Full=Probable GTP-binding protein EngB
gi|117579263|emb|CAL67732.1| protein containing GTP binding domain [Gramella forsetii KT0803]
Length = 198
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 130/198 (65%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA TS KPGKTQL
Sbjct: 2 KIKTAEFVISNSKVDHCPNSTLPEYAFIGRSNVGKSSLINMLTGRKSLAKTSAKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N +W++VDLPGYG+A+ T+ + F YF RE ++ +LID+ PQ
Sbjct: 62 INHFLINNNWHLVDLPGYGYAQVSKSTKKVFQKFITAYFKKREQMICAFVLIDSRHKPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG +NIP +FTK DK+ K + D+NI++++ + E++ P + +TS+
Sbjct: 122 IDMEFMQWLGEHNIPFCIIFTKADKL---KPKILDKNIENYKNEMLESWVEMPEYFITSA 178
Query: 198 VTGLGRDELLLHMSQLRN 215
+ LG+D++L ++ + N
Sbjct: 179 TSKLGQDDILDYIEGINN 196
>gi|313146704|ref|ZP_07808897.1| GTPase EngB [Bacteroides fragilis 3_1_12]
gi|423277021|ref|ZP_17255935.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 610]
gi|424663295|ref|ZP_18100332.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 616]
gi|313135471|gb|EFR52831.1| GTPase EngB [Bacteroides fragilis 3_1_12]
gi|404576985|gb|EKA81723.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 616]
gi|404587497|gb|EKA92036.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 610]
Length = 201
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N IP + +FTK DK+ KG R NI ++ + +R+ + PP+ +TSS
Sbjct: 122 IDIEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLKELRKQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR E+L ++ +
Sbjct: 179 EECLGRTEVLNYIESI 194
>gi|270294150|ref|ZP_06200352.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20]
gi|270275617|gb|EFA21477.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20]
Length = 202
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT LI
Sbjct: 3 ITNAEFVISNTDVRKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NKSWYIVDLPGYG+AK + + Y L RE + + +LID+ + PQ I
Sbjct: 63 NHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N +P VFTK DK+ KG R + +I + + ++E + PP+ +TSS
Sbjct: 123 DLEFTEWLGENGVPFAIVFTKADKL---KGGRLNTHINEYLEQLKEQWEELPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+GR ELL ++ +
Sbjct: 180 NRMGRKELLDYIESI 194
>gi|281425242|ref|ZP_06256155.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|299142639|ref|ZP_07035769.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
gi|281400708|gb|EFB31539.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris
F0302]
gi|298575854|gb|EFI47730.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735]
Length = 198
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ CPKDD+PE+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFVISAPTVSKCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK + Y L R+ L+ V +LID QK
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQLINVFVLIDIRHEQQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG +N+P T VFTK DK+ K + +N + + + +++ + PP+ +TSS
Sbjct: 122 IDREFIDWLGESNVPFTIVFTKADKLGPGKAK---QNAQKWLEQLKDRWETLPPYYITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR+ELL ++ ++
Sbjct: 179 EKKLGREELLAYIDEI 194
>gi|402831093|ref|ZP_10879786.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
CM59]
gi|402283142|gb|EJU31664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
CM59]
Length = 199
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ FV S+ + CP PE+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 EIKQASFVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ ++ + F YF R+ LV +L+D PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYAQVSKQSKKTFQQFITDYFKKRKELVCAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP +FTK DK+ + ++++ ++Q+++ E++ PP+ +TSS
Sbjct: 122 IDLEFMLWLGENAIPFAIIFTKADKL---APKVIEQHVLTYQKILLESWEEIPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+ LG++E+L ++ +
Sbjct: 179 ESKLGKEEVLDYIENI 194
>gi|317478908|ref|ZP_07938055.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
4_1_36]
gi|316904885|gb|EFV26692.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
4_1_36]
Length = 219
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 126/205 (61%), Gaps = 4/205 (1%)
Query: 10 VGPYAGHSQ-IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALT 68
V P G+ I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+T
Sbjct: 10 VKPQKGNKMDITNAEFVISNTDVRKCPTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMT 69
Query: 69 SKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLL 128
S PGKT LINHFL+NKSWYIVDLPGYG+AK + + Y L RE + + +L
Sbjct: 70 SATPGKTMLINHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVL 129
Query: 129 IDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH 188
ID+ + PQ IDL+ WLG N +P VFTK DK+ KG R + +I + + ++E +
Sbjct: 130 IDSRLAPQAIDLEFTEWLGENGVPFAIVFTKADKL---KGGRLNTHINEYLEQLKEQWEE 186
Query: 189 HPPWIMTSSVTGLGRDELLLHMSQL 213
PP+ +TSS +GR ELL ++ +
Sbjct: 187 LPPYFITSSENRMGRKELLDYIESI 211
>gi|228471282|ref|ZP_04056088.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis
60-3]
gi|228306924|gb|EEK16022.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis
60-3]
Length = 203
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 129/196 (65%), Gaps = 5/196 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I FV+SS K CP+ PE+A +GRSNVGKSSLIN L K LA+TS+KPGKTQLI
Sbjct: 3 IHSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N+SW++VDLPGYG+A+ R + Y RE+LV + +L+D PQ+I
Sbjct: 63 NHFLINQSWHLVDLPGYGYARRSLEQREQFRKLITQYVSKREALVNLFVLVDIRHEPQRI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR-PDENIKSFQQLIRENYPHHPPWIMTSS 197
DL+ N +G IP + VFTK DK+ G++ E +++++ + E++ PP +TS+
Sbjct: 123 DLEFINEMGEKGIPFSIVFTKADKI----GKQVQQEAVEAYRSRLLEDWEELPPLFVTSA 178
Query: 198 VTGLGRDELLLHMSQL 213
TG+GRDELL ++ QL
Sbjct: 179 STGMGRDELLDYIDQL 194
>gi|423306403|ref|ZP_17284402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T00C23]
gi|423309007|ref|ZP_17286997.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T12C37]
gi|392678910|gb|EIY72308.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T00C23]
gi|392685746|gb|EIY79057.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides uniformis
CL03T12C37]
Length = 202
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT LI
Sbjct: 3 ITNAEFVISNTDVRKCPTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NKSWYIVDLPGYG+AK + + Y L RE + + +LID+ + PQ I
Sbjct: 63 NHFLINKSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N +P VFTK DK+ KG R + +I + + ++E + PP+ +TSS
Sbjct: 123 DLEFTEWLGENGVPFAIVFTKADKL---KGGRLNTHINEYLEQLKEQWEELPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+GR ELL ++ +
Sbjct: 180 NRMGRKELLDYIESI 194
>gi|429751364|ref|ZP_19284284.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 326 str. F0382]
gi|429180786|gb|EKY21988.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 326 str. F0382]
Length = 201
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPK++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ SW++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQKI
Sbjct: 62 NHFKIDNSWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG + IP VFTK DK+K + NI +++Q++ E + PP+ +TS+
Sbjct: 122 DVEFMQWLGEHGIPFAIVFTKADKLKPLA---IELNIAAYRQVLLETWEEFPPYFITSAE 178
Query: 199 TGLGRDELLLHMSQL 213
G++EL ++ Q+
Sbjct: 179 NKTGKEELTHYIEQI 193
>gi|60681583|ref|YP_211727.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
NCTC 9343]
gi|81315351|sp|Q5LDL2.1|ENGB_BACFN RecName: Full=Probable GTP-binding protein EngB
gi|60493017|emb|CAH07797.1| putative GTP-binding cell division protein [Bacteroides fragilis
NCTC 9343]
Length = 201
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP +FTK DK+ KG R NI ++ + +R+ + PP+ +TSS
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKL---KGGRLKINISAYLRELRKQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR E+L ++ +
Sbjct: 179 EERLGRTEVLNYIESI 194
>gi|53713337|ref|YP_099329.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
YCH46]
gi|265763411|ref|ZP_06091979.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_16]
gi|336409727|ref|ZP_08590209.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_56FAA]
gi|375358460|ref|YP_005111232.1| putative GTP-binding cell division protein [Bacteroides fragilis
638R]
gi|383118319|ref|ZP_09939061.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_2_5]
gi|423257653|ref|ZP_17238576.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T00C01]
gi|423265380|ref|ZP_17244383.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T12C05]
gi|423267971|ref|ZP_17246943.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T00C42]
gi|423274575|ref|ZP_17253522.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T12C13]
gi|423285825|ref|ZP_17264706.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 615]
gi|81382646|sp|Q64UN4.1|ENGB_BACFR RecName: Full=Probable GTP-binding protein EngB
gi|52216202|dbj|BAD48795.1| putative GTP-binding protein [Bacteroides fragilis YCH46]
gi|251945595|gb|EES86002.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_2_5]
gi|263256019|gb|EEZ27365.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_16]
gi|301163141|emb|CBW22690.1| putative GTP-binding cell division protein [Bacteroides fragilis
638R]
gi|335946108|gb|EGN07914.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_56FAA]
gi|387778021|gb|EIK40117.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T00C01]
gi|392703038|gb|EIY96182.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL07T12C05]
gi|392704939|gb|EIY98071.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T00C42]
gi|392705601|gb|EIY98731.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL05T12C13]
gi|404578509|gb|EKA83230.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
HMW 615]
Length = 201
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP +FTK DK+ KG R NI ++ + +R+ + PP+ +TSS
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKL---KGGRLKINISAYLRELRKQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR E+L ++ +
Sbjct: 179 EERLGRTEVLNYIESI 194
>gi|423249960|ref|ZP_17230976.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T00C08]
gi|423255460|ref|ZP_17236389.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T12C07]
gi|392651105|gb|EIY44770.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T12C07]
gi|392654022|gb|EIY47671.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis
CL03T00C08]
Length = 201
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITNAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINNSWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP +FTK DK+ KG R NI ++ + +R+ + PP+ +TSS
Sbjct: 122 IDLEFMEWLGENGIPFAIIFTKADKL---KGGRLKININAYLRELRKQWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR E+L ++ +
Sbjct: 179 EERLGRTEVLNYIESI 194
>gi|313206541|ref|YP_004045718.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485843|ref|YP_005394755.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|386321468|ref|YP_006017630.1| putative GTPase [Riemerella anatipestifer RA-GD]
gi|407451616|ref|YP_006723340.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|416109724|ref|ZP_11591604.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM]
gi|442314258|ref|YP_007355561.1| putative GTPase [Riemerella anatipestifer RA-CH-2]
gi|312445857|gb|ADQ82212.1| ribosome biogenesis GTP-binding protein YsxC [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315023518|gb|EFT36522.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM]
gi|325336011|gb|ADZ12285.1| Predicted GTPase [Riemerella anatipestifer RA-GD]
gi|380460528|gb|AFD56212.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|403312600|gb|AFR35441.1| putative GTPase [Riemerella anatipestifer RA-CH-1]
gi|441483181|gb|AGC39867.1| putative GTPase [Riemerella anatipestifer RA-CH-2]
Length = 208
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFVKSS + ++CP+ + PE+A +GRSNVGKSSLINA+ K LA TS+ PGKTQLI
Sbjct: 4 IKSAEFVKSSQKWQECPEANLPEYAFIGRSNVGKSSLINAITGNKNLAKTSQTPGKTQLI 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N+ WY+ DLPGYG+AK R D+ Y LNR++LV + +L+D PQKI
Sbjct: 64 NHFIINEEWYLTDLPGYGYAKVSKTQRKDFEKLITNYILNRKNLVNLFILVDIRHTPQKI 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G + IP + VFTK DK+K ++ N++ + + + E++ P +TS+
Sbjct: 124 DLEFIEWCGESGIPFSIVFTKEDKLKPNAAKK---NVEDYTKTLLESWEEAPQMYITSAE 180
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
G + +L ++ Q + Q
Sbjct: 181 KKTGTEAILEYIEQTNLFLQQ 201
>gi|410099851|ref|ZP_11294819.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
goldsteinii CL02T12C30]
gi|409217684|gb|EKN10659.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
goldsteinii CL02T12C30]
Length = 200
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ K CP + PE+A +GRSNVGKSSLIN L KK LA+TS+KPGKT L
Sbjct: 2 EIKSAEFVISNTDVKKCPAGNFPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N +W++VDLPGYGFA+ R + + Y L RE L + +LID QK
Sbjct: 62 INHFIINNNWFLVDLPGYGFAQRGKEGRQNIQRIIEDYILEREQLTNLFVLIDCRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK D K++KGR EN+K++Q+ + E + PP +++SS
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKID--KISKGRL-QENLKAYQEKLLETWEELPPILLSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR+E+L ++ +
Sbjct: 179 EKKDGREEILDYIDTI 194
>gi|313676939|ref|YP_004054935.1| ribosome biogenesis GTP-binding protein ysxc [Marivirga tractuosa
DSM 4126]
gi|312943637|gb|ADR22827.1| ribosome biogenesis GTP-binding protein YsxC [Marivirga tractuosa
DSM 4126]
Length = 203
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ + P+ D PE+A +GRSNVGKSSLIN L +K LA TS KPGKTQL
Sbjct: 3 RIKNAEFVISNTDYRKSPETDLPEYAFIGRSNVGKSSLINMLTDRKNLAKTSSKPGKTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+++ WY+VDLPGYG+AK T W Y NRE+LV + +LID+ +PPQK
Sbjct: 63 INHFLMDEKWYLVDLPGYGYAKVSKKTNEGWGKMISDYLKNRENLVCIFVLIDSRLPPQK 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ +++G+N +PL+ +FTK DK + +NI F++ + + PP+ ++S+
Sbjct: 123 ADVEFLDFIGKNGLPLSLIFTKADKQ---SNNKTQQNIAVFKKKMLNTWEEFPPYFVSSA 179
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
G++E+L + Q+ W +
Sbjct: 180 EKQTGKEEILGIIDQMNTAWAE 201
>gi|363582943|ref|ZP_09315753.1| GTP-binding protein YsxC [Flavobacteriaceae bacterium HQM9]
Length = 205
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV S+ CP D PE+A +GRSNVGKSSLINAL+ +K LA TS +PGKTQL
Sbjct: 2 KISSADFVISNSDVAKCPGDTLPEYAFIGRSNVGKSSLINALMGRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFLVNK+W++VDLPGYG+A+ T+ + F YF R+ LV +L+D PQK
Sbjct: 62 INHFLVNKNWFLVDLPGYGYARTSKSTKKTFQKFITNYFKERKQLVSAFVLVDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL WL N +P +FTK DK+ + + EN KS + E + PP+ +TSS
Sbjct: 122 IDLAFMEWLANNQVPFFIIFTKADKLTINTLPKHIENYKS---KMLEFWEEMPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+ G +E+L H+ QL
Sbjct: 179 TSKQGCEEVLTHIDQL 194
>gi|255530888|ref|YP_003091260.1| HSR1-like GTP-binding protein [Pedobacter heparinus DSM 2366]
gi|255343872|gb|ACU03198.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366]
Length = 201
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK F+ S+ + P + PE+A +GRSNVGKSSLIN LV + LA TS++PGKTQLI
Sbjct: 3 IKSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N+ WYIVDLPGYG+AK +R +W F + Y RESL V +LID+ + PQKI
Sbjct: 63 NHFLINEKWYIVDLPGYGYAKVSKTSRENWEKFIRNYITKRESLQCVFVLIDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W+G IP +FTK DK K D+N+ F++ + + PP+ +TS+
Sbjct: 123 DLEFCCWMGEIQIPFALIFTKADKQSTVK---TDKNVALFKKALGGWFEEIPPYFVTSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G G++++L + Q+
Sbjct: 180 KGTGKEKVLEFIEQV 194
>gi|423316124|ref|ZP_17294029.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
ATCC 43767]
gi|405584397|gb|EKB58304.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
ATCC 43767]
Length = 206
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I FVKSSGR +DCP+ PE+A +GRSNVGKSSLINA++ +K+LA TS+ PGKTQLI
Sbjct: 3 IHSANFVKSSGRWQDCPEPTLPEYAFIGRSNVGKSSLINAMMNRKDLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N++W++ DLPGYG+AK R D+ Y LNR++LV + +LID PQKI
Sbjct: 63 NHFLINENWFLTDLPGYGYAKVSKSLRKDFEKLITNYILNRKNLVNLFVLIDVRHTPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W + IP + VFTK DK+ KG ++N ++ + + E + P +TSS
Sbjct: 123 DLEFMEWCAESGIPFSIVFTKADKL---KGMMAEKNANAYLEKMLETWDEVPNHFLTSSE 179
Query: 199 TGLGRDELL 207
+G +++L
Sbjct: 180 KKIGTEDVL 188
>gi|359406314|ref|ZP_09199012.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella stercorea
DSM 18206]
gi|357556376|gb|EHJ37985.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella stercorea
DSM 18206]
Length = 202
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CPKD +PEFA +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKSEFTMSSATVSQCPKDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYGFAK + Y L R+ LV +LID P KI
Sbjct: 63 NHFIINNDWYLVDLPGYGFAKRSKTVQKKLDQMITSYILQRQQLVNTFVLIDIRHDPMKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D D NWLG +++P + +FTK DK+ + + +N + ++E + PP+ +TSS
Sbjct: 123 DTDFINWLGESSVPFSIIFTKADKLGPVRAK---QNAAKWMNSLKEQWEELPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQLRN 215
LGRDE+L ++ + N
Sbjct: 180 KKLGRDEVLDYVGNILN 196
>gi|406660680|ref|ZP_11068810.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
gi|405555599|gb|EKB50615.1| putative GTP-binding protein EngB [Cecembia lonarensis LW9]
Length = 226
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 124/203 (61%), Gaps = 4/203 (1%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+ IK+ FV S+ K CP PEFA +GRSNVGKSSL+N L K LA TS KPGKTQ
Sbjct: 24 AMIKKASFVISNTDYKKCPAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGKTQ 83
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LINHFL+N +WY+VDLPGYGFAK + W Y ++RE+LV V +LID+ + PQ
Sbjct: 84 LINHFLINDNWYLVDLPGYGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLDPQ 143
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
KID++ W G IP +FTK DK ++ N++ F E + P + +TS
Sbjct: 144 KIDIEFITWCGEQGIPFVLIFTKSDKQ---GKQKTSANVRKFLDSCLEIFGDEPQYYVTS 200
Query: 197 SVTGLGRDELLLHM-SQLRNYWD 218
+ TG G++ELL + ++ Y+D
Sbjct: 201 AQTGEGKEELLAFIGEEVEEYYD 223
>gi|150008077|ref|YP_001302820.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis ATCC 8503]
gi|255014915|ref|ZP_05287041.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_7]
gi|256840744|ref|ZP_05546252.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D13]
gi|262381349|ref|ZP_06074487.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_33B]
gi|298376570|ref|ZP_06986525.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_19]
gi|410105375|ref|ZP_11300283.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D25]
gi|423331403|ref|ZP_17309187.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL03T12C09]
gi|166225966|sp|A6LBY4.1|ENGB_PARD8 RecName: Full=Probable GTP-binding protein EngB
gi|149936501|gb|ABR43198.1| GTP-binding protein [Parabacteroides distasonis ATCC 8503]
gi|256738016|gb|EEU51342.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D13]
gi|262296526|gb|EEY84456.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_33B]
gi|298266448|gb|EFI08106.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_19]
gi|409230699|gb|EKN23561.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL03T12C09]
gi|409232585|gb|EKN25431.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp.
D25]
Length = 200
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ + CP+ ++PE+A +GRSNVGKSSLIN L KK LA+TS+ PGKT L
Sbjct: 2 EIKSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + Y L+RE L + +L+D QK
Sbjct: 62 INHFLINNEWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG + +P + +FTK D K++KGR EN+K + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGESGVPFSIIFTKID--KISKGRLK-ENLKVYTDKLLETWEELPPIFLSSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
GRDE+L ++ + N
Sbjct: 179 EKKEGRDEILDYIESINN 196
>gi|325104688|ref|YP_004274342.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans
DSM 12145]
gi|324973536|gb|ADY52520.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans
DSM 12145]
Length = 216
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 130/200 (65%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF S+ + P PE+A +GRSNVGKSSLIN L K LA TS+KPGKTQLI
Sbjct: 3 IKSAEFTVSNTKISKLPPCVLPEYAFIGRSNVGKSSLINMLTDVKGLAKTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NK WY+VDLPGYG+A++ R++W+ F K Y RESL V +LID+ + PQKI
Sbjct: 63 NHFLINKEWYLVDLPGYGYARSSKSNRLEWAKFIKNYLEKRESLQCVFVLIDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ +LG IP +FTK DK V K + +N+ +F++ + +++ P ++TSS
Sbjct: 123 DIEFCCYLGERGIPFILIFTKADKNGVNKSQ---QNMSAFKKEMLKHFEEVPQMLLTSSE 179
Query: 199 TGLGRDELLLHMSQLRNYWD 218
T G++E+L + + +++
Sbjct: 180 TKFGKEEVLSFIQDVNQHFE 199
>gi|375254286|ref|YP_005013453.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella forsythia
ATCC 43037]
gi|363407669|gb|AEW21355.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella forsythia
ATCC 43037]
Length = 202
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ + CP RPE+A +GRSNVGKSSLIN L +K LA+TS+KPGKTQL
Sbjct: 3 EIKSAEFVISNTDVQQCPDGTRPEYAFIGRSNVGKSSLINMLTARKRLAMTSQKPGKTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WYIVDLPGYG+A+ R + + Y L R L + +L+D PQK
Sbjct: 63 INHFIINGDWYIVDLPGYGYAQHGKANRENLRRIIESYILRRPQLTCLFVLLDCRHAPQK 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P +FTK D K++KG R EN+ +++Q + E + P + +SS
Sbjct: 123 IDLEFMEWLGENEVPFAIIFTKTD--KISKG-RLQENLDAYRQKMLETWEELPNILTSSS 179
Query: 198 VTGLGRDELLLHMSQL 213
GR+E+L ++ ++
Sbjct: 180 ENRDGREEILHYIDEI 195
>gi|300774436|ref|ZP_07084299.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium
gleum ATCC 35910]
gi|300506251|gb|EFK37386.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium
gleum ATCC 35910]
Length = 217
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 128/192 (66%), Gaps = 9/192 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFVKSSG+ ++CP+ + PE+A +GRSNVGKSSLINA++ K+LA TS+ PGKTQLI
Sbjct: 13 IKTAEFVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAKTSQTPGKTQLI 72
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVN++WY+ DLPGYG+AK V R D+ Y LNR +LV + +L+D PQKI
Sbjct: 73 NHFLVNENWYLTDLPGYGYAKVSKVQRKDFEKLITNYILNRRNLVNLFVLVDVRHTPQKI 132
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPD---ENIKSFQQLIRENYPHHPPWIMT 195
DL+ W G + IP + VFTK DK+K P+ +N++ ++ + + + P +T
Sbjct: 133 DLEFIQWCGESGIPFSIVFTKADKLK------PNAVIKNVEDYKAELHKTWEDLPELYIT 186
Query: 196 SSVTGLGRDELL 207
S+ G D++L
Sbjct: 187 SAEKKEGGDKIL 198
>gi|301309826|ref|ZP_07215765.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3]
gi|423340300|ref|ZP_17318039.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL09T03C24]
gi|300831400|gb|EFK62031.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3]
gi|409227735|gb|EKN20631.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides
distasonis CL09T03C24]
Length = 200
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ + CP+ ++PE+A +GRSNVGKSSLIN L KK LA+TS+ PGKT L
Sbjct: 2 EIKSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFA+ R + Y L+RE L + +L+D QK
Sbjct: 62 INHFLINDEWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG + +P + +FTK D K++KGR EN+K + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGESGVPFSIIFTKID--KISKGRLK-ENLKVYTDKLLETWEELPPIFLSSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
GRDE+L ++ + N
Sbjct: 179 EKKEGRDEILDYIESINN 196
>gi|374385840|ref|ZP_09643342.1| ribosome biogenesis GTP-binding protein YsxC [Odoribacter laneus
YIT 12061]
gi|373224785|gb|EHP47121.1| ribosome biogenesis GTP-binding protein YsxC [Odoribacter laneus
YIT 12061]
Length = 201
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ CP DR E+A +GRSNVGKSSLIN L +KELA T+ KPGKTQL
Sbjct: 2 EIKKAEFIVSNADVSKCPPSDRHEYAFIGRSNVGKSSLINMLTNRKELAKTAVKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYG+A+ TR + Y L R++L+ + +LID+ P +
Sbjct: 62 INHFLINNEWYMVDLPGYGYARTSKSTRGKFEKIICDYILKRDNLICLFVLIDSRHKPLQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P VFTK DK+ ++ +R I+ + ++ + + P MTSS
Sbjct: 122 IDLEFMEWLGENGVPFVMVFTKADKLTASERQRC---IEDYHNMMLDTWETTPMAFMTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGR+E+L ++ +L
Sbjct: 179 EKRLGREEVLDYIDEL 194
>gi|390954602|ref|YP_006418360.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aequorivita
sublithincola DSM 14238]
gi|390420588|gb|AFL81345.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aequorivita
sublithincola DSM 14238]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK EF+ S+ CPKD PE+A +GRSNVGKSSLIN L+ +K LA TS +PGKTQL
Sbjct: 2 HIKSSEFLMSNSDVTKCPKDRLPEYAFIGRSNVGKSSLINMLMLRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++NKSWY+VDLPGYG+A+ ++ + F YF RE +V +L+D PQ
Sbjct: 62 INHFIINKSWYLVDLPGYGYARVSKSSKKVFQKFITNYFEKREQMVLAFVLVDCRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ W+G + IP +FTK DK K + + NI+ + + + E + P + +TS+
Sbjct: 122 IDLEFMEWMGESGIPFNIIFTKADK---EKPKALERNIEVYTKKMLETWEEMPQYFVTSA 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++++L
Sbjct: 179 SESTGRDEVLKYINKL 194
>gi|373957459|ref|ZP_09617419.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373957494|ref|ZP_09617454.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373894059|gb|EHQ29956.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
gi|373894094|gb|EHQ29991.1| GTP-binding protein engB [Mucilaginibacter paludis DSM 18603]
Length = 215
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K +FV S+ + P +PE+A +GRSNVGKSSLIN LV KK LA TS+ PGKTQLI
Sbjct: 3 VKSADFVCSNTQVSKLPPAVKPEYAFIGRSNVGKSSLINMLVDKKGLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N +WY+VDLPGYG+A+ + DW+ F + Y RESL V +LID+ + PQKI
Sbjct: 63 NHFLINDNWYLVDLPGYGYARISKSKKEDWNKFIRTYLDKRESLQTVFVLIDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ NWLG + +FTK DK K D+N+ +F++ + + P +TS+
Sbjct: 123 DLEFCNWLGEKGLSFALIFTKADKQSRVK---TDQNVSAFKKALLTTFEDIPTIFITSAE 179
Query: 199 TGLGRDELLLHMSQLRNYWD 218
GR+E+L + + N +D
Sbjct: 180 LQTGREEVLNFVGSINNNFD 199
>gi|218130918|ref|ZP_03459722.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697]
gi|317476229|ref|ZP_07935480.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
1_2_48FAA]
gi|217987262|gb|EEC53593.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
DSM 20697]
gi|316907640|gb|EFV29343.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii
1_2_48FAA]
Length = 202
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVNKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WYIVDLPGYG+A+ + + Y L RE + + +L+D+ PQ
Sbjct: 62 INHFLINKNWYIVDLPGYGYARRGQKGQEQIQRIIETYILQREQMTSLFVLVDSRHEPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL WLG N +P VFTK DK+ KG + + NI+ + + + E + PP+ +TSS
Sbjct: 122 IDLSFIEWLGENGVPFAIVFTKADKL---KGGKINSNIRHYLEKLHEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR+ELL ++ Q+
Sbjct: 179 ENRMGREELLNYIEQI 194
>gi|429726804|ref|ZP_19261590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 473 str. F0040]
gi|429145752|gb|EKX88837.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 473 str. F0040]
Length = 201
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 129/201 (64%), Gaps = 4/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDR-PEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK +F SSGRA CP+D + PE+A +GRSNVGKSSLIN L +K LA TS PGKT L
Sbjct: 3 IKSADFFISSGRADQCPQDSQIPEYAFIGRSNVGKSSLINMLTGRKALAKTSSTPGKTML 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N W++VDLPGYGFA+ + + + Y L R+ L + +LID+ +PPQK
Sbjct: 63 INHFMINNEWFLVDLPGYGFARRGKKEMEKFRNLIEYYILERQQLTCLFVLIDSRLPPQK 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG IP + +FT+ DK KV + ++ N++ F + ++E + P +TSS
Sbjct: 123 IDLEFIQWLGEEGIPFSIIFTQADKNKVGELKK---NVQGFLKKLQEEWEELPKHFVTSS 179
Query: 198 VTGLGRDELLLHMSQLRNYWD 218
G GR ELL ++ ++ + D
Sbjct: 180 EKGTGRTELLDYIEEINHGLD 200
>gi|146299560|ref|YP_001194151.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
johnsoniae UW101]
gi|189037178|sp|A5FIZ1.1|ENGB_FLAJ1 RecName: Full=Probable GTP-binding protein EngB
gi|146153978|gb|ABQ04832.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101]
Length = 210
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 128/197 (64%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ A CPKD PE+A +GRSNVGKSSLIN + K LA TS KPGKTQL
Sbjct: 2 KINTAEFIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF NRE LV +LID QK
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLIDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ +++G + IP +FTK D K++KG + D +I ++ +Q+ N+ P + +TS
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKAD--KISKG-KIDSHIAAYRKQMYANNWAEMPQYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S +G+DELL ++ ++
Sbjct: 179 STESIGKDELLTYIDEV 195
>gi|383451571|ref|YP_005358292.1| GTP-binding protein EngB [Flavobacterium indicum GPTSA100-9]
gi|380503193|emb|CCG54235.1| Probable GTP-binding protein EngB [Flavobacterium indicum
GPTSA100-9]
Length = 205
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 130/199 (65%), Gaps = 4/199 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EFV S+ A CPKD PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KVNTAEFVISNSDASKCPKDPIPEYAFIGRSNVGKSSLINMLTGHKSLAKTSARPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+W++VDLPGYG+A+ T+ + F YF R LV +LID+ + PQK
Sbjct: 62 INHFLINKNWFLVDLPGYGYARVSKSTKATFQKFITDYFETRAQLVCAFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ-LIRENYPHHPPWIMTS 196
ID++ N+LG + IP +FTK DK+ + ++ N+ ++++ L+ ++ P + +TS
Sbjct: 122 IDVEFINYLGESGIPFCMIFTKADKLGKTQVQK---NVAAYKKHLLANDWEEIPQYFVTS 178
Query: 197 SVTGLGRDELLLHMSQLRN 215
S G GR+E+L ++ + +
Sbjct: 179 SADGTGREEILKYIGAVND 197
>gi|449458692|ref|XP_004147081.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
Length = 225
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/96 (90%), Positives = 93/96 (96%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
MILPGSNIV+GPYAG S++KEVEFVKSS RA+DCPKD +PEFAILGRSNVGKSSLINALV
Sbjct: 130 MILPGSNIVLGPYAGDSRVKEVEFVKSSARARDCPKDSKPEFAILGRSNVGKSSLINALV 189
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
RKKE+ALTSKKPGKTQLINHFLVNKSWYIVDLPGYG
Sbjct: 190 RKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 225
>gi|224539566|ref|ZP_03680105.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518800|gb|EEF87905.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus
DSM 14838]
Length = 201
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NKSWYIVDLPGYG+A+ + + Y L RE + + LLID+ + PQ
Sbjct: 62 INHFLINKSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDSRLEPQV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + IP + VFTK DK+ KG R + NI+ + + ++E + PP+ +TSS
Sbjct: 122 IDIEFMGWLGEHGIPFSIVFTKGDKL---KGGRLNTNIQQYLKKLKEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+ ELL ++ +
Sbjct: 179 ENRMGKKELLDYIESI 194
>gi|406672317|ref|ZP_11079543.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
CCUG 30536]
gi|405588005|gb|EKB61723.1| ribosome biogenesis GTP-binding protein YsxC [Bergeyella zoohelcum
CCUG 30536]
Length = 206
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I FVKSSG+ +DCP+ PE+A +GRSNVGKSSLINA++ +K+LA TS+ PGKTQLI
Sbjct: 3 IHSANFVKSSGKWQDCPEPTLPEYAFIGRSNVGKSSLINAMMNRKDLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N++W++ DLPGYG+AK R D+ Y LNR++LV + +LID PQKI
Sbjct: 63 NHFLINENWFLTDLPGYGYAKVSKSLRKDFEKLITNYILNRKNLVNLFVLIDVRHTPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W + IP + VFTK DK+ KG ++N ++ + + E + P +TSS
Sbjct: 123 DLEFMEWCAESGIPFSIVFTKADKL---KGMMAEKNADAYLEKMLETWDEVPNHFLTSSE 179
Query: 199 TGLGRDELL 207
+G +++L
Sbjct: 180 KKIGTEDVL 188
>gi|386820085|ref|ZP_10107301.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
gi|386425191|gb|EIJ39021.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Joostella marina
DSM 19592]
Length = 202
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK FV S+ K CP + PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 HIKSATFVMSNSDVKKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N++W++VDLPGYG+AK + + F YF R+ LV +LID PQK
Sbjct: 62 INHFKINENWFLVDLPGYGYAKVSKKVKSTFQKFITKYFEERQQLVSAFVLIDIRHDPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + IP + +FTK DK+K R + K LI + + P + +TSS
Sbjct: 122 IDMEFMQWLGEHQIPFSIIFTKADKLKPKAIERDVK--KYLDVLIADVWEEAPNYFITSS 179
Query: 198 VTGLGRDELLLHMSQLRNYWD 218
+G G+DELL ++ Q+ ++
Sbjct: 180 TSGTGKDELLEYIDQINKEYN 200
>gi|282877547|ref|ZP_06286364.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis
ATCC 35310]
gi|281300332|gb|EFA92684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis
ATCC 35310]
Length = 199
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 120/196 (61%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ SS CPKD+R E+A +GRSNVGKSSLIN L K L+ TS PGKT L
Sbjct: 2 EIKKAEFLISSPTIDKCPKDNRIEYAFIGRSNVGKSSLINMLCNHKGLSKTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYGFAK + D Y L RE LV + +LID QK
Sbjct: 62 INHFLINDEWYLVDLPGYGFAKRSKKVQADIEKMINTYILQREQLVNLFVLIDVRHEQQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID +WLG N IP T VFTK DK+ K + N + + +R+ + PP+ +TSS
Sbjct: 122 IDRAFIDWLGENEIPFTIVFTKADKLGTVKAK---ANAAQWMEQLRDAWEELPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR+ELL ++ ++
Sbjct: 179 EKRTGREELLAYIDEI 194
>gi|345867877|ref|ZP_08819878.1| ribosome biogenesis GTP-binding protein YsxC [Bizionia
argentinensis JUB59]
gi|344047799|gb|EGV43422.1| ribosome biogenesis GTP-binding protein YsxC [Bizionia
argentinensis JUB59]
Length = 199
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CPKD PE+A +GRSNVGKSSLIN + +K LA TS +PGKTQL
Sbjct: 2 EIKSAEFVMSNSDVTKCPKDLLPEYAFIGRSNVGKSSLINMITNRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+W++VDLPGYG+A+ ++ + F YF RE +V +L+D PQ
Sbjct: 62 INHFLINKTWHLVDLPGYGYARVSKSSKKTFQKFITDYFNQREQMVSAFVLVDIRHKPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ W+G N+IP + +FTK DK+ K + ++ + ++ E + P + +TSS
Sbjct: 122 IDLEFMAWMGENDIPFSIIFTKADKL---KPQAILNHVADYSAVMMETWEDMPNYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+DELL ++ ++
Sbjct: 179 SKEMGKDELLNYIHEV 194
>gi|311745594|ref|ZP_07719379.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1]
gi|126578156|gb|EAZ82376.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1]
Length = 203
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ +FV S+ +CPK DR E A +GRSNVGKSSLIN L K LA TS+KPGKTQLI
Sbjct: 2 IQQAQFVISNTNPGNCPKPDRAEIAFIGRSNVGKSSLINMLTGKSGLAKTSQKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N+ WY+VDLPGYGFAK + W S Y RE+L GV +LID+ + PQKI
Sbjct: 62 NHFMINEKWYLVDLPGYGFAKINVKVKQGWESMISTYLTKRENLCGVFVLIDSRLEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G +P VFTK DK + ++NI+ F + + + + P + +TS+
Sbjct: 122 DLEFLYWCGTEGVPAVLVFTKADKQ---SKNKTNQNIQKFLKKMVDIFEEAPQYFVTSAE 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
+ G++EL + +L ++
Sbjct: 179 SAQGKEELTSFIEELVQEYE 198
>gi|399023372|ref|ZP_10725433.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Chryseobacterium
sp. CF314]
gi|398083067|gb|EJL73798.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Chryseobacterium
sp. CF314]
Length = 207
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 129/198 (65%), Gaps = 3/198 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK FVKSSG+ ++CP+ + PE+A +GRSNVGKSSLINA++ K+LA TS PGKTQLI
Sbjct: 3 IKTATFVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAKTSGTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVN +WY+ DLPGYG+AK V R D+ Y LNR++LV + +L+D PQKI
Sbjct: 63 NHFLVNDTWYLTDLPGYGYAKVSKVIRKDFEKLITNYILNRKNLVNLFVLVDIRHTPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ W G + IP + VFTK DK+K + N++ +++ + + + P +TS+
Sbjct: 123 DMEFIQWCGESGIPFSIVFTKADKLKPNVAIK---NVEEYKKELHKTWEDLPELYVTSAE 179
Query: 199 TGLGRDELLLHMSQLRNY 216
G DE+L + + ++
Sbjct: 180 KKEGGDEILSFIQKTNDF 197
>gi|408673112|ref|YP_006872860.1| GTP-binding protein engB [Emticicia oligotrophica DSM 17448]
gi|387854736|gb|AFK02833.1| GTP-binding protein engB [Emticicia oligotrophica DSM 17448]
Length = 203
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 125/193 (64%), Gaps = 3/193 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E +FV S+ + CP +PE+A +GRSNVGKSSLIN L K LA TS+ PGKTQLINH
Sbjct: 8 EAKFVTSAADYRKCPPPTKPEYAFIGRSNVGKSSLINMLAGNKNLAKTSQVPGKTQLINH 67
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F +NK +YIVDLPGYGFAKAP R W Y NRESLV V +LID PQ++DL
Sbjct: 68 FEINKKYYIVDLPGYGFAKAPKNEREKWGDMIGNYLANRESLVCVFVLIDIRHEPQRVDL 127
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ ++LG ++P +FTK DK+ G ++N++ F++ + ++ P + +TSS
Sbjct: 128 EFLDFLGERDVPFCLIFTKADKV---GGLTAEKNVELFKKTMLLSWTKIPQYFITSSERR 184
Query: 201 LGRDELLLHMSQL 213
LGRDE+L + ++
Sbjct: 185 LGRDEILQAIEEM 197
>gi|326802551|ref|YP_004320370.1| GTP-binding protein engB [Sphingobacterium sp. 21]
gi|326553315|gb|ADZ81700.1| GTP-binding protein engB [Sphingobacterium sp. 21]
Length = 206
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/189 (51%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV S+ R P PE+A +GRSNVGKSSLINAL + K LA TS+ PGKTQLI
Sbjct: 9 IKSAEFVCSNTRIDKLPPPTIPEYAFIGRSNVGKSSLINALTQHKGLAKTSQTPGKTQLI 68
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVNK W++VDLPGYG+AK R +W F K Y NRE+L V +LID+ + PQK
Sbjct: 69 NHFLVNKEWFLVDLPGYGYAKTSKTNRSEWEKFIKKYLFNRENLQCVFVLIDSRLTPQKN 128
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD LG IP +FTK DK K + NI+ F++ + + PP I+TSS
Sbjct: 129 DLDFCCLLGEKGIPFILIFTKADKQSKIKS---EHNIELFRKALLTWFEEVPPHILTSSE 185
Query: 199 TGLGRDELL 207
T G DE+L
Sbjct: 186 TRNGCDEVL 194
>gi|34540179|ref|NP_904658.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W83]
gi|188995479|ref|YP_001929731.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis ATCC 33277]
gi|419970136|ref|ZP_14485646.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W50]
gi|81572162|sp|Q7MX68.1|ENGB_PORGI RecName: Full=Probable GTP-binding protein EngB
gi|238689267|sp|B2RL89.1|ENGB_PORG3 RecName: Full=Probable GTP-binding protein EngB
gi|34396491|gb|AAQ65557.1| GTP-binding protein [Porphyromonas gingivalis W83]
gi|188595159|dbj|BAG34134.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|392611551|gb|EIW94287.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis W50]
Length = 201
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ FV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS+KPGKTQL
Sbjct: 2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF+++ SWY+VDLPGYG+A+ R + Y L RE L + +LID PQK
Sbjct: 62 INHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + VFTK DK+ + R EN ++++Q + E + PP +TSS
Sbjct: 122 IDLEFLQWLGENGIPFSIVFTKADKLSFS---RLKENTEAYKQKLLETWEELPPVFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
G++ELL ++ +
Sbjct: 179 EKKTGKEELLDYIDSI 194
>gi|288925742|ref|ZP_06419673.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
D17]
gi|315608306|ref|ZP_07883295.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
ATCC 33574]
gi|402308788|ref|ZP_10827791.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. MSX73]
gi|288337397|gb|EFC75752.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
D17]
gi|315249936|gb|EFU29936.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae
ATCC 33574]
gi|400374757|gb|EJP27671.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. MSX73]
Length = 202
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 123/202 (60%), Gaps = 3/202 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ R CPKDDR E+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFIISAPRVSMCPKDDRLEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK GY L R+ L V +LID + PQK
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVLKQLEQMIAGYILQRKQLANVFVLIDIRLDPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG +N+P VFTK DK+ K + N + +++ + PP+ +TS+
Sbjct: 122 IDREFIDWLGESNVPFAIVFTKADKLGPVKAK---ANAARWMTSLQDRWEELPPYFITSA 178
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
GR+ELL ++ ++ +Q
Sbjct: 179 EKRTGREELLDYIDEINKVMEQ 200
>gi|423299716|ref|ZP_17277741.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii CL09T03C10]
gi|408473525|gb|EKJ92047.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii CL09T03C10]
Length = 201
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + LLID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELSKQWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 ENRTGRTEILDYIENI 194
>gi|312131612|ref|YP_003998952.1| ribosome biogenesis GTP-binding protein ysxc [Leadbetterella
byssophila DSM 17132]
gi|311908158|gb|ADQ18599.1| ribosome biogenesis GTP-binding protein YsxC [Leadbetterella
byssophila DSM 17132]
Length = 200
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI+ F KSS + CP+D+ PE A +GRSNVGKSSLIN L K LA TS PGKTQL
Sbjct: 3 QIRSAVFSKSSAKIDQCPQDNLPEIAFIGRSNVGKSSLINMLTGVKNLAKTSSTPGKTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INH+LV+ +WY+VDLPGYG+AK P + W T Y L+R++L+ V +L+D + PQK
Sbjct: 63 INHYLVDNAWYLVDLPGYGYAKVPMSEKAKWEKMTWDYLLDRKTLLYVFVLVDIRIKPQK 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DLD LG N I + VFTK DK+K +G+R NI +F + ++E++ P + +TSS
Sbjct: 123 SDLDFIRKLGENGIAIKIVFTKEDKVKTMEGQR---NIMAFLEALKEDWDILPEYFVTSS 179
Query: 198 VTGLGRDELL 207
G+ E+L
Sbjct: 180 EKRSGKVEML 189
>gi|304382687|ref|ZP_07365181.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii
DSM 16973]
gi|304336312|gb|EFM02554.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii
DSM 16973]
Length = 202
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV SS + CP D +PE+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFVISSPTVQKCPADTKPEYAFIGRSNVGKSSLINMLCNHKNLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYG+AK + S Y L R+ L+ V +LID Q+
Sbjct: 62 INHFIINNEWYLVDLPGYGYAKRSKTVQQQLSRMITSYILQRKQLINVFVLIDIRHEAQQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D + +WLG ++IP VFTK DK+ K R +N++++ +++ + PP+ +TS+
Sbjct: 122 NDREFIDWLGESSIPFAIVFTKADKLGAVKAR---QNVEAYMNALKDRWEELPPYFITSA 178
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
GRDELL ++ + D+
Sbjct: 179 EKRTGRDELLNYIDDINRSLDE 200
>gi|404448256|ref|ZP_11013249.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
gi|403765877|gb|EJZ26752.1| GTP-binding protein engB [Indibacter alkaliphilus LW1]
Length = 202
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 127/201 (63%), Gaps = 4/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK +FV S+ K CP+ +PEFA +GRSNVGKSSLIN L K LA TS KPGKTQLI
Sbjct: 2 IKNAQFVISNTDYKKCPEPTKPEFAFIGRSNVGKSSLINMLTNNKNLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N +WY+VDLPGYGFAK + W Y NR++LV + +L+D+ + PQKI
Sbjct: 62 NHFVINGNWYMVDLPGYGFAKVSKGIKSTWEKMISNYLTNRDNLVALCVLVDSRLEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G N+IP +FTK DK +K + +NI+ F + + P + +TS+
Sbjct: 122 DLEFITWCGENDIPFILIFTKSDKQAKSKTQ---QNIQKFLNECVKIFGEDPQFFVTSAQ 178
Query: 199 TGLGRDELLLHM-SQLRNYWD 218
+ G++++L +++ Y+D
Sbjct: 179 SSEGKEDVLTFFDEEVKEYYD 199
>gi|332878394|ref|ZP_08446117.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332683659|gb|EGJ56533.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 200
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV S+ + CPKD PE+A +GRSNVGKSSLIN L K LA TS +PGKTQLI
Sbjct: 2 IKKAEFVMSNSQVAKCPKDRLPEYAFIGRSNVGKSSLINMLTNCKNLAKTSGRPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ W++VDLPGYG+A+ T+ + F YF RE LV +L+D PQKI
Sbjct: 62 NHFKIDDRWFLVDLPGYGYARVSKTTKQVFQRFITDYFEQREQLVSAFVLVDIRHEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG IP +FTK DK+K R N+ ++++ + E + PP+ +TS+
Sbjct: 122 DVEFMQWLGERAIPFAIIFTKADKLKPQAIER---NVAAYKEALLEWWEEFPPYFVTSAQ 178
Query: 199 TGLGRDELLLHMSQ 212
G++EL ++ Q
Sbjct: 179 NKTGKEELTQYIEQ 192
>gi|329964825|ref|ZP_08301833.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus
YIT 12057]
gi|328524466|gb|EGF51534.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus
YIT 12057]
Length = 201
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EISNAEFVISNTDVEKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+AK + + Y L R+ + + +LID+ + PQ
Sbjct: 62 INHFLINKNWYLVDLPGYGYAKRGQKGQEQIQRIIESYILRRKQMTNLFVLIDSRLDPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD WLG N IP + VFTK DK+ KG R + +I + + + E + PP+ +TSS
Sbjct: 122 IDLDFIEWLGENGIPFSIVFTKADKL---KGGRLNTHINLYLKKLHEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR ELL ++ ++
Sbjct: 179 ENRMGRKELLDYIEKI 194
>gi|408370285|ref|ZP_11168063.1| putative GTP-binding protein [Galbibacter sp. ck-I2-15]
gi|407744363|gb|EKF55932.1| putative GTP-binding protein [Galbibacter sp. ck-I2-15]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 123/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QIK FV S+ CP + PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 QIKSATFVISNTDVSRCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ + + F YF R+ LV +LID PQ
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKTAKSKFQKFITSYFSQRKQLVSAFILIDIRHSPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ WLG N IP + VFTK DK+K R NI+++ Q ++ + + P + +TS
Sbjct: 122 IDMEFMQWLGENQIPFSIVFTKADKLKPKAIER---NIQAYLQAMLDDLWEETPNYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S G GR+ELL ++ Q+
Sbjct: 179 SSNGTGREELLDYIDQI 195
>gi|404485029|ref|ZP_11020233.1| ribosome biogenesis GTP-binding protein YsxC [Barnesiella
intestinihominis YIT 11860]
gi|404340034|gb|EJZ66465.1| ribosome biogenesis GTP-binding protein YsxC [Barnesiella
intestinihominis YIT 11860]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FV SS KDCP PE+A +GRSNVGKSSLIN L KK LA+TS PGKT L
Sbjct: 2 EIKNARFVISSSHVKDCPSHGLPEYAFIGRSNVGKSSLINMLTCKKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFLV+ SWY+VDLPGYG+A+ +R +GY L R+ + + +L+D PQK
Sbjct: 62 INHFLVDDSWYLVDLPGYGYARRGKESREALREMIEGYVLYRKEMTCLFVLLDCRHKPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N++P VFTK DK+ + E+I+ ++Q++ E++ PP TSS
Sbjct: 122 IDLEFMEWLGENSVPFAIVFTKTDKIGPVVLK---EHIEYYKQVLHESWEELPPIFATSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR+ELL ++ ++
Sbjct: 179 EKRRGREELLDYIDRV 194
>gi|410027630|ref|ZP_11277466.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinilabilia
sp. AK2]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ FV S+ K CP PEFA +GRSNVGKSSL+N L K LA TS KPGKTQLI
Sbjct: 2 IKKASFVISNTDYKKCPAPVMPEFAFIGRSNVGKSSLVNMLTNNKNLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N +WY+VDLPGYGFAK + W Y ++RE+LV V +LID+ + PQKI
Sbjct: 62 NHFLINDNWYLVDLPGYGFAKVSKSIQSTWEKMISDYLIHRENLVAVCVLIDSRLDPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G IP +FTK DK K N++ F E + P + +TS+
Sbjct: 122 DLEFITWCGEQEIPFVLIFTKSDKQGKTK---TGANVRKFLDACFEIFGDEPQYYVTSAQ 178
Query: 199 TGLGRDELLLHMS-QLRNYWD 218
TG G++ LL ++ +++ Y+D
Sbjct: 179 TGDGKEPLLEFIADEVKEYYD 199
>gi|256426042|ref|YP_003126695.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588]
gi|256040950|gb|ACU64494.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK E++ S+ + CP + PE+A +GRSNVGKSSLIN L ++LA TS PGKTQLI
Sbjct: 3 IKSAEYLISNVDWQKCPTPNLPEYAFIGRSNVGKSSLINMLANNEKLAKTSGTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N SWY+VDLPGYGFAK R W + Y RE+LV + +LID+ PQK+
Sbjct: 63 NHFLINGSWYLVDLPGYGFAKVSQSQRRSWEQMIENYLRKRENLVNIFVLIDSRHTPQKL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ N LG IP VFTK DK A+ R NIK+F +RE + P +TS+V
Sbjct: 123 DIEFINQLGEWQIPFALVFTKADKSTQAETSR---NIKAFLNKLRETWEFLPAHFVTSTV 179
Query: 199 TGLGRDELL 207
+GRD +L
Sbjct: 180 KKMGRDAIL 188
>gi|423225167|ref|ZP_17211634.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
cellulosilyticus CL02T12C19]
gi|392633623|gb|EIY27565.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
cellulosilyticus CL02T12C19]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WYIVDLPGYG+A+ + + Y L RE + + LLID+ + PQ
Sbjct: 62 INHFLINKNWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDSRLEPQV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + +P + VFTK DK+ KG R + NI+ + + ++E + PP+ +TSS
Sbjct: 122 IDIEFMGWLGEHGVPFSIVFTKGDKL---KGGRLNTNIQQYLKKLKEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+ ELL ++ +
Sbjct: 179 ENRMGKKELLDYIESI 194
>gi|189466062|ref|ZP_03014847.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM
17393]
gi|189434326|gb|EDV03311.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
intestinalis DSM 17393]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN + +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMMTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NKSWYIVDLPGYG+A+ + + Y L RE + + +LID+ + PQ
Sbjct: 62 INHFLINKSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFVLIDSRLDPQV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + IP + VFTK DK+ KG R + NI+ + + ++E + PP+ +TSS
Sbjct: 122 IDIEFMGWLGEHGIPFSIVFTKGDKL---KGGRLNSNIQQYLKKLKEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+ ELL ++ +
Sbjct: 179 ENRMGKKELLDYIESI 194
>gi|334147248|ref|YP_004510177.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis TDC60]
gi|333804404|dbj|BAK25611.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas
gingivalis TDC60]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ FV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS+KPGKTQL
Sbjct: 2 EIKKAAFVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF+++ SWY+VDLPGYG+A+ R + Y L RE L + +LID PQK
Sbjct: 62 INHFIIDDSWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP VFTK DK+ + R EN ++++Q + E + PP +TSS
Sbjct: 122 IDLEFLQWLGENGIPFGIVFTKADKLSFS---RLKENTEAYKQKLLETWEELPPVFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
G++ELL ++ +
Sbjct: 179 EKKTGKEELLDYIDSI 194
>gi|303237178|ref|ZP_07323748.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens
FB035-09AN]
gi|302482565|gb|EFL45590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens
FB035-09AN]
Length = 225
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFSISSPTIAKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WYIVDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYLLQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++NIP + VFTK DK+ V K + N ++ + + + + PP+ +TSS
Sbjct: 123 DREFIDWLGKSNIPFSIVFTKADKLSVGKAK---ANAAAWMKKLEDTWEEIPPYFVTSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+ LGR+E+L ++ ++
Sbjct: 180 SKLGREEVLDYIGRI 194
>gi|429737925|ref|ZP_19271760.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
saccharolytica F0055]
gi|429161478|gb|EKY03877.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
saccharolytica F0055]
Length = 213
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ F S+ CPKD++ E+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 14 EIKKSAFTLSAPTVSQCPKDNKVEYAFIGRSNVGKSSLINMLCNHKGLAKTSSTPGKTLL 73
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N +WY+VDLPGYGFAK + GY L RE LV V +LID QK
Sbjct: 74 INHFIINDAWYLVDLPGYGFAKRSKTVQKQLQQIISGYILQREQLVNVFVLIDVRHEQQK 133
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG ++IP T VFTK DK+ K R +N + + + + + PP+ +TSS
Sbjct: 134 IDREFVDWLGESSIPFTIVFTKADKLGPVKAR---QNAERWMKQLESGWEELPPYFITSS 190
Query: 198 VTGLGRDELLLHMSQL 213
+GRDE+L ++ ++
Sbjct: 191 EKRMGRDEVLGYIEEI 206
>gi|149371567|ref|ZP_01890983.1| GTP-binding protein [unidentified eubacterium SCB49]
gi|149355194|gb|EDM43754.1| GTP-binding protein [unidentified eubacterium SCB49]
Length = 199
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ CPKD PE+A +GRSNVGKSSLIN LV +K +A TS +PGKTQL
Sbjct: 2 KIKAAEFIMSNSEVAKCPKDRLPEYAFIGRSNVGKSSLINMLVDQKNMAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+W++VDLPGYG+A+ + + F YF RE L+ +L+D PQ
Sbjct: 62 INHFLINKNWFLVDLPGYGYARVSKKAKKTFQRFITDYFEKREQLILAFVLVDCRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +LG N IP +FTK DK+K R N+K+++ + E + P +TS+
Sbjct: 122 IDQEFMQYLGENGIPFHIIFTKADKLKPGALER---NLKAYETKMLETWEEMPRSFVTSA 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDELL ++ +L
Sbjct: 179 SKYEGRDELLNYIGEL 194
>gi|427383039|ref|ZP_18879759.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
oleiciplenus YIT 12058]
gi|425729490|gb|EKU92342.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
oleiciplenus YIT 12058]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWYIVDLPGYG+A+ + + Y L RE + + LLID+ + PQ
Sbjct: 62 INHFLINNSWYIVDLPGYGYARRGQKGKTQIQRIIEDYILEREQMTNLFLLIDSRLDPQT 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + +P + VFTK DK+ KG R + NI+ + + ++E + PP+ +TSS
Sbjct: 122 IDIEFMEWLGEHGVPFSIVFTKGDKL---KGGRLNINIQQYLKKLKEQWEELPPYFVTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+ ELL ++ +
Sbjct: 179 ENRMGKKELLDYIESI 194
>gi|332667993|ref|YP_004450781.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100]
gi|332336807|gb|AEE53908.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100]
Length = 227
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 126/197 (63%), Gaps = 3/197 (1%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
++I EF S CPK++ PEFA +GRSNVGKSSLIN L KKELA TS+KPGKTQ
Sbjct: 23 TEIATAEFKGSFPSIGQCPKEEWPEFAFIGRSNVGKSSLINMLCDKKELAHTSQKPGKTQ 82
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
L+N++L+N+ WYIVDLPGYG+AK R +W + Y + R SL +L+D+++ PQ
Sbjct: 83 LLNYYLINQQWYIVDLPGYGYAKISQSKRKEWRKMIQDYLVKRPSLCCAFVLVDSNIKPQ 142
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D++ NWLG +IP VFTK D++ K + +ENIK Q+ + E + P TS
Sbjct: 143 EKDIEFINWLGEMHIPFVLVFTKTDRL---KPQDIEENIKLMQEKLLEYWNELPQQFFTS 199
Query: 197 SVTGLGRDELLLHMSQL 213
+ +GR E+L ++ L
Sbjct: 200 ASKRVGRTEILDYIEGL 216
>gi|255691813|ref|ZP_05415488.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii DSM 17565]
gi|260622531|gb|EEX45402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
finegoldii DSM 17565]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + LLID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+K R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKLKSG---RLKMNINAYLRELSKQWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 ENRTGRTEILDYIESI 194
>gi|384097564|ref|ZP_09998685.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
gi|383837532|gb|EID76932.1| GTP-binding protein YsxC [Imtechella halotolerans K1]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 4/199 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CPK+ PE+A +GRSNVGKSSLIN L ++K LA TS +PGKTQL
Sbjct: 2 EIKSAEFVMSNSDVGKCPKEPIPEYAFIGRSNVGKSSLINMLTQRKGLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ + + F YF R+ LV +LID PQK
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKSMKNTFQKFITQYFEKRQQLVSAFVLIDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQ-QLIRENYPHHPPWIMTS 196
IDL+ W+G + IP + +FTK DK+K +R ++K ++ +L+ + + P + +TS
Sbjct: 122 IDLEFMQWMGEHQIPFSIIFTKADKLKPGAIQR---HVKEYESKLLEDAWEEMPNYFITS 178
Query: 197 SVTGLGRDELLLHMSQLRN 215
S GRD+LL ++ + N
Sbjct: 179 SSNFTGRDQLLKYIEDINN 197
>gi|29346493|ref|NP_809996.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
thetaiotaomicron VPI-5482]
gi|383122724|ref|ZP_09943414.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
1_1_6]
gi|81445016|sp|Q8A8T4.1|ENGB_BACTN RecName: Full=Probable GTP-binding protein EngB
gi|29338389|gb|AAO76190.1| putative GTP-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842176|gb|EES70256.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
1_1_6]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N+SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINQSWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINNYLRELSKEWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 ENRTGRTEILDYIENI 194
>gi|373462504|ref|ZP_09554223.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
gi|371948068|gb|EHO65958.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella maculosa
OT 289]
Length = 198
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EFV SS CP D++PE+A +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKSEFVISSPTVGKCPADNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYGFAK + Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKTVQKKLEQMISSYILQRKQLVNVFVLIDVRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P T VFTK DK+ K + +N + +++ + PP+ +TSS
Sbjct: 123 DREFVDWLGESNVPFTIVFTKADKLTPGKAK---QNAAQWLDRLKDRWETLPPYYITSSE 179
Query: 199 TGLGRDELLLHMSQLRN 215
GR+ELL ++ ++ N
Sbjct: 180 KKQGREELLNYIEEINN 196
>gi|409122979|ref|ZP_11222374.1| GTP-binding protein YsxC [Gillisia sp. CBA3202]
Length = 201
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 123/197 (62%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV S+ CP PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQLI
Sbjct: 3 IKSSEFVVSNSDVAKCPNSKLPEYAFIGRSNVGKSSLINMLTARKSLAKTSGRPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NK W++VDLPGYG+A+ + + F YF +RE ++ +LID+ PQ I
Sbjct: 63 NHFLINKEWHLVDLPGYGYARVSKSIKKTFQKFITQYFEHREQMLCAFVLIDSRHNPQPI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG + IP +FTK DK+K R NI+ +++ + E + P + +TSS
Sbjct: 123 DLEFMQWLGEHGIPFCIIFTKADKLKPNALTR---NIEVYKEKMLEIWVEMPVYFVTSST 179
Query: 199 TGLGRDELLLHMSQLRN 215
LGR+E+L ++ L N
Sbjct: 180 NDLGREEVLKYIENLNN 196
>gi|409097338|ref|ZP_11217362.1| HSR1-like GTP-binding protein [Pedobacter agri PB92]
Length = 207
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK FV S+ + P PE+A +GRSNVGKSSLIN LV + LA TS++PGKTQLI
Sbjct: 3 IKTATFVCSNTQISALPPPTMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVN+ WYIVDLPGYG+AK +R W F + Y RESL V +LID+ + PQ+I
Sbjct: 63 NHFLVNEKWYIVDLPGYGYAKVSKTSREKWEKFIRAYITKRESLQCVFVLIDSRLDPQQI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WLG IP + +FTK DK + ++ N+ +F++ + E + P +TS+
Sbjct: 123 DIEFCYWLGEKQIPFSLIFTKADKQGMTTTQK---NVAAFKKKLGEFFEEIPATFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G G+D++L ++++
Sbjct: 180 KGNGKDDVLNFITEV 194
>gi|225011603|ref|ZP_03702041.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A]
gi|225004106|gb|EEG42078.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI+ FV S+ CP PE+A +GRSNVGKSSLINAL KK LA TS +PGKTQL
Sbjct: 2 QIRSATFVISNSDVAKCPNSHLPEYAFIGRSNVGKSSLINALCNKKNLAKTSSRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N++W++VDLPG+G+A+ + + F YF R+ LV LLID PQ
Sbjct: 62 INHFLINQNWHLVDLPGFGYARVSKTQKKVFQKFVTNYFKERKQLVNAFLLIDIRHDPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ WLG N IP + +FTK DK+K A R NIK++ ++++ + PP +TS
Sbjct: 122 IDMNFMEWLGENQIPFSIIFTKADKLKPAARER---NIKAYTEKMLATLWEELPPIFITS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S+ G +E+L ++ L
Sbjct: 179 SLHKTGGEEILEYIHSL 195
>gi|298207894|ref|YP_003716073.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
gi|83850535|gb|EAP88403.1| GTP-binding protein [Croceibacter atlanticus HTCC2559]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV S+ CP+D PE+A +GRSNVGKSSLIN + K+LA TS PGKTQL
Sbjct: 2 KINTAKFVISNSDVDKCPQDKLPEYAFIGRSNVGKSSLINMMTNNKKLAKTSSTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYG+A+ T+ + F YF+ R LV +L+D+ PQK
Sbjct: 62 INHFIINDEWYLVDLPGYGYARTSKKTKKVFQKFITDYFVKRSQLVCAFVLVDSRHAPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N+IP +FTK DK+K KG D N K + + E + P + TSS
Sbjct: 122 IDLEFMEWLGTNSIPFAIIFTKTDKLK--KGEW-DRNFKVYSSKMMETWAEMPEYFTTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+ G +E+L ++ +
Sbjct: 179 LHKTGAEEVLEYIDTI 194
>gi|189462131|ref|ZP_03010916.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136]
gi|189431212|gb|EDV00197.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides coprocola
DSM 17136]
Length = 239
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 123/198 (62%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ RA CP+ + PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 41 EITSAEFVVSNSRADMCPQTNLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLL 100
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFLVNK WY+VDLPGYG+A+ + Y L RE + + +L+D+ + QK
Sbjct: 101 INHFLVNKEWYLVDLPGYGYAQRGKKMMDKIQKLIEYYVLEREQMTCLFVLVDSRLESQK 160
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P +FTK DK K + N+ + ++++E + PP+ ++SS
Sbjct: 161 IDLEFMEWLGENGVPFAIIFTKSDKQSSGKTKF---NVNRYMEVLKEQWEELPPYFISSS 217
Query: 198 VTGLGRDELLLHMSQLRN 215
GR E+L ++ + N
Sbjct: 218 EKKTGRKEILDYIESINN 235
>gi|402494456|ref|ZP_10841197.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Aquimarina
agarilytica ZC1]
Length = 204
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV S+ CP + PE+A +GRSNVGKSSLINAL+++K LA TS +PGKTQL
Sbjct: 2 KISSADFVISNSDVARCPSNPFPEYAFIGRSNVGKSSLINALMKRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+W++VDLPGYG+A+ T+ + F YF R LV +L+D PQK
Sbjct: 62 INHFLINKNWFLVDLPGYGYARTSKSTKKTFQKFITNYFKQRTQLVSAFVLVDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL WL N++P +FTK DK+ P ++I++++ + E + PP+ +TSS
Sbjct: 122 IDLAFMEWLATNSVPFFIIFTKADKL--TPNTLP-KHIENYKNKMLEFWEEMPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+ G DE+L H+ L
Sbjct: 179 SSKQGCDEVLAHIDHL 194
>gi|395803407|ref|ZP_10482654.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
gi|395434453|gb|EJG00400.1| GTP-binding protein YsxC [Flavobacterium sp. F52]
Length = 206
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ A CPKD PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KINTAEFIVSNSDASKCPKDFLPEYAFIGRSNVGKSSLINMLTNNKNLAKTSARPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF NRE LV +LID Q
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSVFQKFITDYFENREQLVCAFVLIDIRHEAQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ +++G + IP +FTK DK+ K D +I ++ +Q+ N+ P + +TS
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKIGKTK---IDSHIAAYKKQMFANNWAEMPQYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S +G++ELL ++ Q+
Sbjct: 179 SAESIGKEELLSYIDQV 195
>gi|408492194|ref|YP_006868563.1| GTP-binding protein EngB [Psychroflexus torquis ATCC 700755]
gi|408469469|gb|AFU69813.1| GTP-binding protein EngB [Psychroflexus torquis ATCC 700755]
Length = 199
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CP PE+A +GRSNVGKSSLIN L + LA S KPGKT+L
Sbjct: 2 KIKTSEFVMSNSDVTKCPNSQLPEYAFIGRSNVGKSSLINMLTERNSLAKVSGKPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SW++VDLPGYG+AK + + + YF R+ LV +LID+ PQ
Sbjct: 62 INHFLINDSWHLVDLPGYGYAKVSKKEKKTFQKYITAYFEKRQQLVNTFVLIDSRHAPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL+ WLG+N IPL+ VFTK DK+ K + + NI ++ + E + PP+ TSS
Sbjct: 122 LDLEFLEWLGKNAIPLSIVFTKTDKL---KPKVLENNIIDYKTKLMETWEELPPYFTTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GRD++L ++ ++
Sbjct: 179 AHKTGRDDILNYIHEI 194
>gi|126663224|ref|ZP_01734222.1| GTPase EngB [Flavobacteria bacterium BAL38]
gi|126624882|gb|EAZ95572.1| GTPase EngB [Flavobacteria bacterium BAL38]
Length = 206
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CPK+ PE+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 KINTAEFVISNSEVDKCPKERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ T+ + F YF RE LV +LID + QK
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKKTKAVFQQFIMDYFEQREQLVCAFVLIDIRLEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG + IP +FTK DK+ K E K +QL+ ++ PP+ +TSS
Sbjct: 122 IDLEFMEYLGESEIPFAIIFTKSDKLGKNKVNNHVEAYK--KQLLAGDWAEMPPYFVTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
+ +GR+ +L +++Q+
Sbjct: 180 LEAIGREGILEYINQI 195
>gi|375013450|ref|YP_004990438.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Owenweeksia
hongkongensis DSM 17368]
gi|359349374|gb|AEV33793.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Owenweeksia
hongkongensis DSM 17368]
Length = 201
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 128/198 (64%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I +FV S+ CP+ ++PE+A +GRSNVGKS+LIN +V++K LA TS +PGKTQL
Sbjct: 2 HIHSADFVCSNNDITKCPEPNKPEYAFIGRSNVGKSTLINKMVQRKGLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N++WY+ DLPGYG+AK ++ + + Y + R +LV + +LID+ PQK
Sbjct: 62 INHFLINEAWYLTDLPGYGYAKVSKTSKEKFQKLIEDYIIERPNLVNLFVLIDSRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG IP + VFTK DK+ K + NIK + + + + + P + TS+
Sbjct: 122 IDLEFMEWLGELEIPFSMVFTKTDKLGSGK---LNTNIKVYSKKMLQTWAEMPVFFATSA 178
Query: 198 VTGLGRDELLLHMSQLRN 215
TG G D++L ++ QL N
Sbjct: 179 ETGEGCDQVLNYIEQLNN 196
>gi|393783906|ref|ZP_10372075.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
salyersiae CL02T12C01]
gi|392667565|gb|EIY61072.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
salyersiae CL02T12C01]
Length = 201
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EISNAEFIISNTDVKKCPAGRLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WYIVDLPGYG+A+ + + + Y L RE + + LLID+ + PQK
Sbjct: 62 INHFLINNGWYIVDLPGYGYARRGMKGQDQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELHKQWEELPPYFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR+E+L ++ +
Sbjct: 179 EDRTGREEILDYIESI 194
>gi|332882335|ref|ZP_08449963.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
gi|332679719|gb|EGJ52688.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp.
oral taxon 329 str. F0087]
Length = 230
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CP PE+A +GRSNVGKSSLIN L K+LA TS PGKT L
Sbjct: 34 EIKSAEFVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSATPGKTLL 93
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYG+AK + Y L RE + + +L+D+ PQK
Sbjct: 94 INHFLINNEWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTNLFVLVDSRHEPQK 153
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N IP + VFTK DK K K + NI ++ + ++E + PP+ +TSS
Sbjct: 154 IDMEFIEWLGENGIPFSIVFTKADKSKPTKLKA---NIDAYLKALKEQWEELPPYFITSS 210
Query: 198 VTGLGRDELLLHMSQL 213
GR ELL ++ +
Sbjct: 211 ENKTGRTELLNYIESI 226
>gi|340620855|ref|YP_004739306.1| putative GTP-binding protein engB [Capnocytophaga canimorsus Cc5]
gi|339901120|gb|AEK22199.1| Probable GTP-binding protein engB [Capnocytophaga canimorsus Cc5]
Length = 198
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + EF+ S+ CPK+ PE+A +GRSNVGKSSLIN L K LA TS KPGKTQLI
Sbjct: 3 ITKAEFIISNSDVSKCPKEILPEYAFIGRSNVGKSSLINMLTNNKNLAKTSGKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF +N +W++VDLPGYG+A+ T+ + F YF R+ L+ +L+D PQ I
Sbjct: 63 NHFKINNNWFLVDLPGYGYARVSKSTKKVFQKFITQYFEKRKQLILAFVLVDIRHEPQTI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+D WLG N IP +FTK DK+K +R N+ +++Q + + + P + +TSS
Sbjct: 123 DVDFMQWLGENQIPFAIIFTKADKLKPEAIKR---NVATYRQKMLDFWEEMPTYFVTSSS 179
Query: 199 TGLGRDELLLHMSQL 213
+G++E+L ++ Q+
Sbjct: 180 NRMGKEEVLAYIDQI 194
>gi|365877473|ref|ZP_09416977.1| ribosome biogenesis GTP-binding protein ysxc [Elizabethkingia
anophelis Ag1]
gi|442587748|ref|ZP_21006563.1| putative GTPase [Elizabethkingia anophelis R26]
gi|365754906|gb|EHM96841.1| ribosome biogenesis GTP-binding protein ysxc [Elizabethkingia
anophelis Ag1]
gi|442562602|gb|ELR79822.1| putative GTPase [Elizabethkingia anophelis R26]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK VEFVKSS + ++CP+ + PE+A +GRSNVGKSSLINA++ +K+LA TS+ PGKTQLI
Sbjct: 3 IKSVEFVKSSSKWQECPEANLPEYAFIGRSNVGKSSLINAMMDRKDLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVN++WY+ DLPGYG+AK R + Y LNR +LV + +L+D PQKI
Sbjct: 63 NHFLVNETWYLTDLPGYGYAKVSKTLRKSFEKLITNYILNRNNLVNLFVLVDIRHAPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ W G + IP + +FTK DK+ K + + ++K++ + + + P +TS+
Sbjct: 123 DIEFMQWCGESGIPFSIIFTKADKL---KPKAIENHVKAYHDELLQFWEELPQSYITSAE 179
Query: 199 TGLGRDELL 207
G D +L
Sbjct: 180 KKEGGDAIL 188
>gi|357046418|ref|ZP_09108045.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella clara
YIT 11840]
gi|355530657|gb|EHH00063.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella clara
YIT 11840]
Length = 220
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 118/196 (60%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CP PE+A +GRSNVGKSSLIN L K+LA TS PGKT L
Sbjct: 24 EIKSAEFVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSATPGKTLL 83
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY+VDLPGYG+AK + Y L RE + + +L+D+ PQK
Sbjct: 84 INHFLINNEWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTNLFVLVDSRHEPQK 143
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N IP + VFTK DK K K + NI ++ + ++E + PP+ +TSS
Sbjct: 144 IDMEFIEWLGENGIPFSIVFTKADKSKPTKLKA---NIDAYLKALKEQWEELPPYFITSS 200
Query: 198 VTGLGRDELLLHMSQL 213
GR ELL ++ +
Sbjct: 201 ENKTGRTELLNYIESI 216
>gi|423218178|ref|ZP_17204674.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
CL03T12C61]
gi|392627681|gb|EIY21716.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
CL03T12C61]
Length = 201
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQ
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELSKQWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 ENRTGRTEILNYIENI 194
>gi|431797188|ref|YP_007224092.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Echinicola
vietnamensis DSM 17526]
gi|430787953|gb|AGA78082.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Echinicola
vietnamensis DSM 17526]
Length = 201
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ ++CP +PEFA +GRSNVGKSSLIN L K LA TS KPGKTQLI
Sbjct: 2 IKKATFLTSNSDFRNCPDPTKPEFAFIGRSNVGKSSLINMLANNKNLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF W+IVDLPGYGFA+ + DW KGY +R +L +LID+ + PQK
Sbjct: 62 NHFDAEGKWWIVDLPGYGFAQVSKSIKADWEKMIKGYLTSRPNLKATFVLIDSRLDPQKR 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD W +N +P+ VFTK DK+ V+K + N+ F + + P + +TSS
Sbjct: 122 DLDFILWCAQNGVPIVLVFTKADKLSVSKVKG---NVNKFLAASQVIFEEPPLYFVTSST 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
T +GR+EL+ M ++ +D
Sbjct: 179 TAVGREELVGFMEEVAEEFD 198
>gi|336171700|ref|YP_004578838.1| GTP-binding protein engB [Lacinutrix sp. 5H-3-7-4]
gi|334726272|gb|AEH00410.1| GTP-binding protein engB [Lacinutrix sp. 5H-3-7-4]
Length = 206
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CPKD PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSAEFVISNSEVSKCPKDMLPEYAFIGRSNVGKSSLINMLTSRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++NK WY+VDLPGYG+A+ T+ + F YF RE LV +L+D PQ
Sbjct: 62 INHFIINKEWYLVDLPGYGYARVSKSTKKVFQKFITKYFEQREQLVCAFVLVDIRHKPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG IP +FTK DK+K R +++ +++++ E + P +TSS
Sbjct: 122 IDLEFMQYLGEGGIPFCIIFTKADKLKPNAITR---HVEDYRKIMLETWEEMPQHFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+G+D++L + +L
Sbjct: 179 SKDIGKDDVLNFIGEL 194
>gi|393787971|ref|ZP_10376102.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides nordii
CL02T12C05]
gi|392656184|gb|EIY49823.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides nordii
CL02T12C05]
Length = 201
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EISNAEFIVSNTDVKKCPPGHLPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SW IVDLPGYG+A+ + + + Y L RE + + LLID+ + PQK
Sbjct: 62 INHFLINDSWCIVDLPGYGYARRGMKGQEQIRTIIEDYILEREQMTNLFLLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N IP + +FTK DK+ KG R NI ++ + +R+ + PP+ ++SS
Sbjct: 122 IDMEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYIRELRKQWEELPPYFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR E+L ++ +
Sbjct: 179 EDRMGRTEILDYIESI 194
>gi|86140633|ref|ZP_01059192.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
gi|85832575|gb|EAQ51024.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 121/196 (61%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK EF+ S+ CPK+ PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 HIKSAEFLVSNSNVAKCPKNKMPEYAFIGRSNVGKSSLINMLTDRKNLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N++WY+VDLPGYG+A+ + ++ F YF RE LV +LID PQ
Sbjct: 62 INHFVINQTWYLVDLPGYGYARVSKKVKKEFQKFITQYFEEREQLVSAFVLIDCRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +LG IP + +FTK DK+K R EN K Q+L+ + P + ++S+
Sbjct: 122 IDREFMQYLGEKQIPFSIIFTKADKLKPKALERNIENYK--QELLAGAWAEMPNYFISSA 179
Query: 198 VTGLGRDELLLHMSQL 213
G+DE+L ++ +
Sbjct: 180 TNSTGKDEILDYIDAI 195
>gi|390943206|ref|YP_006406967.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Belliella
baltica DSM 15883]
gi|390416634|gb|AFL84212.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Belliella
baltica DSM 15883]
Length = 202
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK F+ S+ CP D+ EFA +GRSNVGKSSLIN L K LA TS KPGKTQLI
Sbjct: 2 IKNATFLISNTDYNKCPAPDKAEFAFIGRSNVGKSSLINMLANNKNLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF+V+ WY+VDLPGYGFAK + DW K Y +NR++LV + +LID+ + PQKI
Sbjct: 62 NHFIVDNKWYMVDLPGYGFAKVSKSLKADWEGMIKDYLVNRDNLVALFVLIDSRLEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G +NIP+ +FTK DK K + + F + + + P + +TS+
Sbjct: 122 DLEFITWCGESNIPIVLLFTKADKQSRPKTQ---STVAKFLKASKAIFEEAPLYFVTSAT 178
Query: 199 TGLGRDELL 207
+G G+ E++
Sbjct: 179 SGDGKTEVV 187
>gi|372209967|ref|ZP_09497769.1| GTP-binding protein YsxC [Flavobacteriaceae bacterium S85]
Length = 205
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QIK EFV S+ CP ++ PE+A +GRSNVGKSSLIN L + +LA TS PGKTQL
Sbjct: 2 QIKSAEFVISNSEVSKCPSENIPEYAFIGRSNVGKSSLINMLTGRNKLAKTSSTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ ++ SF YF R+ LV +LID+ PQK
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKSTKKEFQSFITSYFKQRKELVCTFVLIDSRHSPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ-LIRENYPHHPPWIMTS 196
ID+D +L N IP +FTK DK+ K + +NI +++ +++ N+ P + +S
Sbjct: 122 IDVDFMEFLAENEIPFCMIFTKTDKL---KPKAIAQNITKYKESMLKGNWAAFPTYFTSS 178
Query: 197 SVTGLGRDELLLHMSQLRNYWDQ 219
S G++E+L + Q+ + Q
Sbjct: 179 STHKNGKEEILHFIDQVNKEFYQ 201
>gi|89891777|ref|ZP_01203279.1| GTP-binding cell division protein EngB [Flavobacteria bacterium
BBFL7]
gi|89515932|gb|EAS18597.1| GTP-binding cell division protein EngB [Flavobacteria bacterium
BBFL7]
Length = 200
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP E+A +GRSNVGKSSLIN L KK LA TS +PGKTQL
Sbjct: 2 KITSSEFVISNQDVKRCPDSKLAEYAFIGRSNVGKSSLINMLTNKKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NKSW++VDLPGYG+A+ ++ + F YF R LV +L+D PQ
Sbjct: 62 INHFLINKSWHLVDLPGYGYARVSKSSKAKFQKFITNYFQQRRQLVCAFVLVDVRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + WLG N IP VFTK DK+K R E K +QL+ + PP+ +TSS
Sbjct: 122 IDTEFMEWLGENGIPFGIVFTKADKLKPNALERNVEVYK--KQLLDGVWEEVPPYFITSS 179
Query: 198 VTGLGRDELLLHMSQLRNYWD 218
G G++ELL ++ ++ D
Sbjct: 180 SNGTGQEELLNYIGEINASLD 200
>gi|333382792|ref|ZP_08474458.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286]
gi|332828393|gb|EGK01102.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286]
Length = 198
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ +FV S+ + CP+D +PE+A +GRSNVGKSSLIN L +K LA+TS KPGKTQLI
Sbjct: 3 IRDAQFVVSNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+A+ R Y +NR L + LL+D PQ+I
Sbjct: 63 NHFIINDEWYLVDLPGYGYAQRGKEGRDQIRKIIDSYIINRAELTCLFLLLDCRHEPQQI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ NWLG +P VFTK DK+ ++ N++++ ++E + PP +S+
Sbjct: 123 DIEFMNWLGEEGVPFVIVFTKIDKLSKGALKK---NMEAYTDTLKETWEEIPPIFYSSAE 179
Query: 199 TGLGRDELLLHMSQL 213
LG DE+L ++ Q+
Sbjct: 180 HRLGADEILGYIEQI 194
>gi|380695227|ref|ZP_09860086.1| GTP-binding protein YsxC [Bacteroides faecis MAJ27]
Length = 202
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVRKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N+SWY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINQSWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPYFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 EDRTGRTEILDYIENI 194
>gi|333377283|ref|ZP_08469018.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836]
gi|332884603|gb|EGK04860.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836]
Length = 201
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ +FV S+ + CP+D +PE+A +GRSNVGKSSLIN L +K LA+TS KPGKTQLI
Sbjct: 3 IKDAQFVISNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+A+ R Y L R L + LL+D PQKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAQRGKDGREQIRKIIDNYILKRTELTCLFLLLDCRHEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD NWLG IP VFTK D K++KGR D N +++ + E + P TSS
Sbjct: 123 DLDFINWLGEEGIPFVIVFTKTD--KISKGRLKD-NSEAYINKLHETWEEIPTIFYTSSE 179
Query: 199 TGLGRDELLLHMSQL 213
G DE+L ++ +
Sbjct: 180 QRAGGDEILDYIDNI 194
>gi|299145429|ref|ZP_07038497.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_23]
gi|298515920|gb|EFI39801.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_23]
Length = 201
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIHTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELSKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR E+L ++ +
Sbjct: 179 EDRMGRMEILNYIENI 194
>gi|412992500|emb|CCO18480.1| ribosome biogenesis GTP-binding protein YsxC [Bathycoccus prasinos]
Length = 353
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDD-RPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
++++V S +DCP ++ PE A++GRSNVGKSSL+N L A+ S PG T+
Sbjct: 96 KLQKVRLTSSVENERDCPPENGLPEIALIGRSNVGKSSLLNMLTEGTSHAIVSANPGTTR 155
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
INH+L++ WYIVDLPGYGFAKA + + W +F K YF R++L GVLLLIDAS+ Q
Sbjct: 156 SINHYLIDAKWYIVDLPGYGFAKATEEEILSWDTFAKNYFKTRQTLCGVLLLIDASIETQ 215
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRP---DENIKSFQQLIRENYPHHPPWI 193
DLD AN+L N+IP T VFTKCD+ K KG +ENI++ + + E + P I
Sbjct: 216 DKDLDYANYLIGNDIPFTIVFTKCDRKK--KGPNTPTVEENIEALENRLEETWHRLPSII 273
Query: 194 MTSSVTGLGRDELLLHMSQL 213
TSSV+ GR ++L +S +
Sbjct: 274 KTSSVSKEGRGDILKFISSI 293
>gi|443242732|ref|YP_007375957.1| GTP-binding cell division protein [Nonlabens dokdonensis DSW-6]
gi|442800131|gb|AGC75936.1| GTP-binding cell division protein [Nonlabens dokdonensis DSW-6]
Length = 200
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ K CP PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KITSAEFIMSNQDVKKCPNSGIPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NKSW++VDLPGYG+A+ ++ + F YF R+ L+ +L+D PQ
Sbjct: 62 INHFLINKSWHLVDLPGYGYARVSKTSKAKFQKFITKYFEQRKQLISGFVLVDVRHDPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN-YPHHPPWIMTS 196
ID++ WLG + IP + VFTK DK+K R N++++++ + + + PP+ +TS
Sbjct: 122 IDVEFMEWLGESGIPFSIVFTKADKLKPKALER---NVEAYKKFMTDGMWEEMPPYFITS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S GR+ELL ++ +
Sbjct: 179 SSDKTGREELLTYIEDI 195
>gi|255536601|ref|YP_003096972.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10]
gi|255342797|gb|ACU08910.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10]
Length = 206
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 129/201 (64%), Gaps = 9/201 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV SS R +DCP+ PE+A +GRSNVGKSSLINA++ K+LA TS+ PGKTQLI
Sbjct: 3 IKTAEFVTSSARWQDCPEPTMPEYAFIGRSNVGKSSLINAMLNFKDLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N+ W++ DLPGYG+A+ R ++ Y LNR++LV + +L+DA PQKI
Sbjct: 63 NHFVINEQWFLTDLPGYGYARVSKTKRKEFEKLITNYILNRKNLVNLFVLVDARHTPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPD---ENIKSFQQLIRENYPHHPPWIMT 195
D++ W G N++P + VFTK DK+K P+ N++ ++ + + + P +T
Sbjct: 123 DIEFIEWCGENSVPFSIVFTKADKLK------PNTVISNVEHYKTELLKTWEDLPEIFVT 176
Query: 196 SSVTGLGRDELLLHMSQLRNY 216
S+ G DE+L +S+ +
Sbjct: 177 SAEKRDGTDEVLKLISKTNTF 197
>gi|153806695|ref|ZP_01959363.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185]
gi|149131372|gb|EDM22578.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides caccae
ATCC 43185]
Length = 201
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQ
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R N+ ++ + + + + PP+ ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNVNAYLRELSKQWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 ENRTGRTEILNYIENI 194
>gi|300771784|ref|ZP_07081655.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761170|gb|EFK57995.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium
spiritivorum ATCC 33861]
Length = 207
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 119/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ EFV S+ R P PE+A +GRSNVGKSSLINA+ KK LA TS+KPGKTQLI
Sbjct: 3 VKKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N W++VDLPGYGFA+ R +W F + Y +R++L V +LID+ PQKI
Sbjct: 63 NHFIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD WLG +P +FTK DK K D NI F++ + + + PP +TS+
Sbjct: 123 DLDFCCWLGECGLPFMLIFTKADKQSAVKS---DVNIAKFRKSLLQWFEEVPPHFLTSAE 179
Query: 199 TGLGRDELL 207
T G + +L
Sbjct: 180 TKTGCEPIL 188
>gi|198275301|ref|ZP_03207832.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135]
gi|198271884|gb|EDY96154.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides plebeius
DSM 17135]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFV S+ RA CP+ PE+A +GRSNVGKSSLIN L + +LA+TS PGKT LI
Sbjct: 3 ITSAEFVVSNSRADMCPQTHLPEYAFIGRSNVGKSSLINMLTKNPKLAMTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+NK WY+VDLPGYG+A+ + Y L RE + + +LID+ + PQ+I
Sbjct: 63 NHFLINKEWYLVDLPGYGYAQRGKKMMEKIQKLIEYYVLEREQMTCLFVLIDSRLEPQRI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG N IP +FTK DK V K + ++ F ++E + PP ++SS
Sbjct: 123 DLEFIEWLGENGIPFALIFTKADKQSVGKTKA---SVNRFLDTLKEQWEELPPHFISSSE 179
Query: 199 TGLGRDELLLHMSQL 213
GR E+L ++ Q+
Sbjct: 180 NKTGRQEILDYIEQV 194
>gi|374595533|ref|ZP_09668537.1| GTP-binding protein engB [Gillisia limnaea DSM 15749]
gi|373870172|gb|EHQ02170.1| GTP-binding protein engB [Gillisia limnaea DSM 15749]
Length = 200
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 123/198 (62%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CP PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSSEFVISNSEVSKCPDSKLPEYAFIGRSNVGKSSLINMLTARKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N W++VDLPGYG+A+ + + F YF RE ++ +LID+ Q
Sbjct: 62 INHFLINSEWHLVDLPGYGYARVSKSIKNTFQKFITAYFEQREQMLCAFVLIDSRHNAQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG ++IP +FTK DK+K R NI++++ + E + P +TS+
Sbjct: 122 IDLEFMQWLGEHSIPFCIIFTKADKLKPKALVR---NIEAYKNKMLEFWEEMPKHFITSA 178
Query: 198 VTGLGRDELLLHMSQLRN 215
+G+GR+E+L ++ L N
Sbjct: 179 ESGVGREEVLEYIENLNN 196
>gi|295135644|ref|YP_003586320.1| GTPase EngB [Zunongwangia profunda SM-A87]
gi|294983659|gb|ADF54124.1| GTPase EngB [Zunongwangia profunda SM-A87]
Length = 200
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 123/198 (62%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA TS KPGKTQL
Sbjct: 2 KINTAEFVVSNSKVAKCPNSPLPEYAFIGRSNVGKSSLINMLTGRKNLAKTSAKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+W++VDLPGYG+AK + + F YF R+ LV +LID+ PQ
Sbjct: 62 INHFLINKNWHLVDLPGYGYAKVSKSAKKVFQKFITNYFEERKQLVCAFVLIDSRHKPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG + IP +FTK DK+ K + ++NI ++Q+ + + + P + +TSS
Sbjct: 122 IDMEFMQWLGEHAIPFCMIFTKADKL---KPKELEKNILNYQEEMLQVWEQMPHFFVTSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
G D++L + L N
Sbjct: 179 TAKTGSDDILEFIENLNN 196
>gi|343084511|ref|YP_004773806.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
gi|342353045|gb|AEL25575.1| GTP-binding protein engB [Cyclobacterium marinum DSM 745]
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 3/188 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K F+ S+ CP +PEFA +GRSNVGKSSLIN L K LA TS KPGKTQLI
Sbjct: 2 LKNARFLMSNSDHTKCPAPTKPEFAFIGRSNVGKSSLINMLTNHKHLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ WY+VDLPGYGFAKA + +W+ + Y RE+LV V +LID+ + PQ I
Sbjct: 62 NHFEIDSRWYMVDLPGYGFAKANKKLKAEWNKMIRNYLTERENLVSVFVLIDSRLNPQAI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ W G+ +P+T +FTK DK +K +N+ F + + + P + +TS++
Sbjct: 122 DIEFITWCGQLELPVTLIFTKADKQSQSK---TSDNVHRFLDEMEKMFVEAPEFFVTSAM 178
Query: 199 TGLGRDEL 206
T +GR+EL
Sbjct: 179 TSVGREEL 186
>gi|225009961|ref|ZP_03700433.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
gi|225005440|gb|EEG43390.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
Length = 204
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CPKD PE+A +GRSNVGKSSLIN L KK LA TS +PGKTQL
Sbjct: 2 KITSAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N++W++VDLPGYG+A+ + + + YFL R LV +L+D PQ
Sbjct: 62 INHFKINQNWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
+DLD W+G N IP +FTK DK+K A + N K++ ++L E + P +TS
Sbjct: 122 VDLDFMRWMGENEIPFCIIFTKADKLKPA---IIEANTKAYNEKLTEEIFELAPEHFITS 178
Query: 197 SVTGLGRDELLLHMSQLRNYW 217
S LG++ELL ++ + +
Sbjct: 179 SSKHLGKEELLGYIGAINEAY 199
>gi|423135988|ref|ZP_17123633.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
gi|371639193|gb|EHO04811.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 101113]
Length = 206
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ AK CP + PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KINTAEFVVSNSDAKKCPNEPIPEYAFIGRSNVGKSSLINMLTNQKYLAKTSSRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +WY+VDLPGYG+AK T+ + F YF NR+ LV +L+D QK
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKAVFQKFITDYFENRQQLVSAFVLVDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG +P + +FTK D KV K + ++++ +N+ PP +TSS
Sbjct: 122 IDLEFMQYLGETEVPFSIIFTKAD--KVGKQKVASLIADYRKKMLADNWEEMPPCFVTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 180 EDKTGRDEVLNYIEEI 195
>gi|365121996|ref|ZP_09338904.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella sp.
6_1_58FAA_CT1]
gi|363643541|gb|EHL82856.1| ribosome biogenesis GTP-binding protein YsxC [Tannerella sp.
6_1_58FAA_CT1]
Length = 201
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK F+ S+ CP + PE+A +GRSNVGKSSLIN L KK LA+TS PGKTQL
Sbjct: 2 EIKSARFIISNTDVTKCPSGNLPEYAFIGRSNVGKSSLINMLTNKKGLAMTSSMPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N +WY+VDLPGYG+A+ R S + Y LNR + + +LID PQK
Sbjct: 62 INHFLINDAWYLVDLPGYGYAQRGKEGREKIRSIIESYILNRYEMTCLFVLIDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N IP VFTK DK+ R EN+++++ + E++ PP TSS
Sbjct: 122 IDVEFLEWLGENEIPFCIVFTKADKLGPV---RFKENVEAYKNRLLEDWEELPPVFYTSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
GR ELL ++ + +
Sbjct: 179 EKKQGRTELLDYIGSIND 196
>gi|340616807|ref|YP_004735260.1| GTP-binding protein EngB [Zobellia galactanivorans]
gi|339731604|emb|CAZ94869.1| GTP-binding protein EngB [Zobellia galactanivorans]
Length = 205
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK FV S+ CP + PE+A +GRSNVGKSSLIN+L +K LA TS +PGKTQL
Sbjct: 2 NIKSANFVISNTDVAKCPNEPLPEYAFIGRSNVGKSSLINSLTERKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ ++ + + YF+ RE LV +L+D PQK
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKKSKNTFQKYITDYFIKREQLVCAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI-KSFQQLIRENYPHHPPWIMTS 196
ID++ WLG NNIP +FTK DK+ K + +EN+ K +L+ + P + +TS
Sbjct: 122 IDMEFMEWLGENNIPFCIIFTKADKL---KPKAIEENVNKYISELLNGVWEEAPSYFITS 178
Query: 197 SVTGLGRDELL 207
S G GRD++L
Sbjct: 179 SSKGYGRDDVL 189
>gi|319953730|ref|YP_004164997.1| gtp-binding protein engb [Cellulophaga algicola DSM 14237]
gi|319422390|gb|ADV49499.1| GTP-binding protein engB [Cellulophaga algicola DSM 14237]
Length = 208
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 4/194 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K EFV S+ +CPK+ PE+A +GRSNVGKSSLIN L KK LA TS +PGKTQL
Sbjct: 2 KVKSAEFVMSNSNVTNCPKEAIPEYAFIGRSNVGKSSLINMLTDKKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N SWY+VDLPGYG+A+ + + + YF R+ LV +L+D PQK
Sbjct: 62 INHFKINDSWYLVDLPGYGYARVSKRDKKTFQRYITDYFRERKQLVSAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
+DL+ W+G N IP + VFTK DK+K R N++++ L+ + P + +TS
Sbjct: 122 VDLEFLEWMGENQIPFSIVFTKADKLKPNVIER---NVQTYIDHLLESMWQEAPNYFITS 178
Query: 197 SVTGLGRDELLLHM 210
+ +G+DE+L ++
Sbjct: 179 ASKNIGQDEVLDYI 192
>gi|372222790|ref|ZP_09501211.1| GTP-binding protein engB [Mesoflavibacter zeaxanthinifaciens S86]
Length = 206
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CPK+ PE+A +GRSNVGKSSLIN LV +K LA TS +PGKTQL
Sbjct: 2 KITSAEFVMSNSDVAKCPKEPLPEYAFIGRSNVGKSSLINMLVDRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +NK+W++VDLPGYG+A+ + + + YFL R+ LV +L+D PQ
Sbjct: 62 INHFKINKNWFLVDLPGYGYARVSKKDKKTFQKYITEYFLKRKQLVCAFVLVDIRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ WLG N IP +FTK DK+K + N+K++ +L+ + PP+ +TS
Sbjct: 122 IDMEFMEWLGSNGIPFAIIFTKADKLKPGAIEK---NVKAYITELLASVWEETPPYFITS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S LG++ LL ++ ++
Sbjct: 179 SSKHLGKEALLNYIEEI 195
>gi|371778550|ref|ZP_09484872.1| ribosome biogenesis GTP-binding protein YsxC [Anaerophaga sp. HS1]
Length = 199
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + +FVKSS ++CP ++PE+A +GRSNVGKSSL+N L ++K LA TS PGKT+LI
Sbjct: 5 ITDAKFVKSSSTLQECPSPNKPEYAFIGRSNVGKSSLLNMLCQRKNLAKTSGTPGKTRLI 64
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NH+L+N WY VDLPGYG+AK R+ +++ Y L+R +LV + +L+D+ PP +
Sbjct: 65 NHYLINNQWYFVDLPGYGYAKLSKKERLKFTNLINDYLLHRSNLVSLFVLVDSRHPPMEQ 124
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD N LG+N IP + VFTK DK+K + + N +++ + +++ P TS +
Sbjct: 125 DLDFINNLGKNGIPFSIVFTKTDKLKPM---QLENNTLVYKKRLLQDWAEIPQLFFTSVI 181
Query: 199 TGLGRDELLLHMSQL 213
T GRDE+L + +L
Sbjct: 182 TQKGRDEILQFIEKL 196
>gi|300727729|ref|ZP_07061115.1| GTP-binding protein [Prevotella bryantii B14]
gi|299775017|gb|EFI71623.1| GTP-binding protein [Prevotella bryantii B14]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF S+ CPKD++PE+A +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKSEFTISAPTVSKCPKDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYGFAK + Y L R+ L V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGFAKRSKSVQQKLEQMISSYILQRQQLYNVFVLIDVRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++ IP VFTK DK+ K ++ N +++ + +++ + PP+ +TSS
Sbjct: 123 DREFVDWLGKSQIPFAIVFTKADKLGPVKAKK---NAEAWMKQLQDTWEDLPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQ 212
LG++E+L ++ Q
Sbjct: 180 KKLGKEEILDYIEQ 193
>gi|440747699|ref|ZP_20926955.1| GTP-binding protein EngB [Mariniradius saccharolyticus AK6]
gi|436483875|gb|ELP39903.1| GTP-binding protein EngB [Mariniradius saccharolyticus AK6]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F S+ CPK D+PE A +GRSNVGKSSLIN L K+LA TS KPGKTQLI
Sbjct: 2 IKKAIFSVSNSDYTKCPKTDKPEIAFIGRSNVGKSSLINMLAGVKDLAKTSGKPGKTQLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF ++ WY+VDLPGYG+A T+ W +GY NR++L+ V++LID+ + PQKI
Sbjct: 62 NHFEIDGRWYMVDLPGYGYAVVSKSTKSSWEKMIRGYLTNRDNLIAVMVLIDSRLEPQKI 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ W G +++P FTK DK+ + K + +I+ F +E + P + +TS+
Sbjct: 122 DLEFITWCGEHDVPFVLAFTKADKLGLEKTKV---SIQRFLDAAKEIFGEEPQYFITSAN 178
Query: 199 TGLGRDELL-LHMSQLRNYWD 218
G++EL+ +++ Y++
Sbjct: 179 KREGKEELIKFFEAEISEYYE 199
>gi|373111000|ref|ZP_09525261.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 10230]
gi|423132332|ref|ZP_17119982.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 12901]
gi|423329706|ref|ZP_17307512.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 3837]
gi|371639831|gb|EHO05444.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 12901]
gi|371641481|gb|EHO07065.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 10230]
gi|404602943|gb|EKB02624.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CCUG 3837]
Length = 206
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ AK CP + PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KINTAEFVVSNSDAKKCPNEPIPEYAFIGRSNVGKSSLINMLTNQKYLAKTSSRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +WY+VDLPGYG+AK T+ + F YF NR+ LV +L+D QK
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKAVFQKFITDYFENRQQLVSAFVLVDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG +P + +FTK D KV K + ++++ +N+ PP +TSS
Sbjct: 122 IDLEFMQYLGETEVPFSIIFTKAD--KVGKQKVAGLIADYRKKMLADNWEEMPPCFVTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 180 EDKTGRDEVLNYIEEI 195
>gi|441499171|ref|ZP_20981358.1| GTP-binding protein EngB [Fulvivirga imtechensis AK7]
gi|441437037|gb|ELR70394.1| GTP-binding protein EngB [Fulvivirga imtechensis AK7]
Length = 208
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + FV SS CP+D RPEFA +GRSNVGKSSLIN L K+LA S KPGKTQL
Sbjct: 2 RITQANFVTSSSHHNQCPEDKRPEFAFIGRSNVGKSSLINMLTNHKKLAKVSGKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N +W++VDLPGYG+AK + W + Y RE+L+ +LID+ + PQ
Sbjct: 62 INHFLINDNWFLVDLPGYGWAKVAKTEKEKWGTMIHDYLTLRENLLCTFILIDSRLAPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ NWLG+ +P +FTK DK K + +I +++ + + PP ++TSS
Sbjct: 122 IDVEFINWLGQQALPFALIFTKVDKQSKNKTQ---SSIAKYKKHLLNYWAELPPVLVTSS 178
Query: 198 VTGLGRDELL 207
+G G++++L
Sbjct: 179 QSGEGKEDVL 188
>gi|423311605|ref|ZP_17289542.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
CL09T03C04]
gi|392690250|gb|EIY83520.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
CL09T03C04]
Length = 200
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + + CP+D+ PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK WY+VDLPGYG+A + Y L+RE + + +LID + PQK
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILDREQMTNLFVLIDCRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK DK+ K + +N+ + + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKLTNGKVK---DNVNKYLKKLTEQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 EKKTGRQEILDYIDSI 194
>gi|227540053|ref|ZP_03970102.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227240069|gb|EEI90084.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 207
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ EFV S+ R P PE+A +GRSNVGKSSLINA+ KK LA TS+KPGKTQLI
Sbjct: 3 VKKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N W++VDLPGYGFA+ R +W F + Y +R++L V +LID+ PQKI
Sbjct: 63 NHFIINDEWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD WLG +P VFTK DK K D NI F++ + + + PP +TS+
Sbjct: 123 DLDFCCWLGECGLPFMLVFTKADKQSAVKS---DVNIAKFRKSLLQWFEEVPPHFLTSAE 179
Query: 199 TGLGRDELL 207
G + +L
Sbjct: 180 AKTGCEPIL 188
>gi|357042492|ref|ZP_09104197.1| GTP-binding protein engB [Prevotella histicola F0411]
gi|355369444|gb|EHG16839.1| GTP-binding protein engB [Prevotella histicola F0411]
Length = 199
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP+D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKKSEFTISSPNVTKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK+ R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLEDRWENLPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
+G+DE+L ++ Q+
Sbjct: 180 QKMGKDEVLDYIEQI 194
>gi|383112888|ref|ZP_09933673.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2]
gi|313692719|gb|EFS29554.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVRKCPAGIFPEYAFIGRSNVGKSSLINMLTNRKGLAMTSATPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFFINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKININAYLRELSKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
+GR E+L ++ +
Sbjct: 179 EDRMGRTEILNYIENI 194
>gi|145351401|ref|XP_001420069.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580302|gb|ABO98362.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 124/200 (62%), Gaps = 2/200 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDR-PEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
++ +V F SS A D P D PE A++GRSNVGKSSL+N++ A S KPG T
Sbjct: 3 KMAKVAFESSSEDASDAPASDGLPEIALIGRSNVGKSSLLNSITFGAGAAAVSAKPGTTV 62
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
+NH+LV+K W +VDLPGYG+AKA W +FTK YF+ RE+L GVLLL+DASVPP
Sbjct: 63 SMNHYLVDKKWRLVDLPGYGYAKADAEAIERWDAFTKDYFVRRENLAGVLLLVDASVPPT 122
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D ANWL + P T VFTKCD+ K DEN + ++ + E + P I TS
Sbjct: 123 ENDERYANWLIEHETPFTIVFTKCDRDKPGMP-SVDENKAALRRKLDEKWHRLPSMISTS 181
Query: 197 SVTGLGRDELLLHMSQLRNY 216
SVT GRDE+L +S L Y
Sbjct: 182 SVTAEGRDEVLKFVSSLIVY 201
>gi|345516317|ref|ZP_08795810.1| GTP-binding protein engB [Bacteroides dorei 5_1_36/D4]
gi|423238864|ref|ZP_17219980.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL03T12C01]
gi|229433921|gb|EEO43998.1| GTP-binding protein engB [Bacteroides dorei 5_1_36/D4]
gi|392647742|gb|EIY41440.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL03T12C01]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + + CP+D+ PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK WY+VDLPGYG+A + Y L RE + + +LID + PQK
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK DK+ K + +N+ + + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKLTNGKVK---DNVNKYLKKLTEQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 EKKTGRQEILDYIDSI 194
>gi|212694988|ref|ZP_03303116.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855]
gi|237710675|ref|ZP_04541156.1| GTPase EngB [Bacteroides sp. 9_1_42FAA]
gi|265750348|ref|ZP_06086411.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_33FAA]
gi|423232433|ref|ZP_17218834.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T00C15]
gi|423242941|ref|ZP_17224017.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T12C06]
gi|212662441|gb|EEB23015.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei DSM
17855]
gi|229455397|gb|EEO61118.1| GTPase EngB [Bacteroides sp. 9_1_42FAA]
gi|263237244|gb|EEZ22694.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
3_1_33FAA]
gi|392624482|gb|EIY18569.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T00C15]
gi|392646729|gb|EIY40441.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides dorei
CL02T12C06]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + + CP+D+ PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK WY+VDLPGYG+A + Y L RE + + +LID + PQK
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK DK+ K + +N+ + + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKLTNGKVK---DNVNKYLKKLTEQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 EKKTGRQEILDYIDSI 194
>gi|150005485|ref|YP_001300229.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
ATCC 8482]
gi|294778688|ref|ZP_06744107.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
PC510]
gi|319640710|ref|ZP_07995424.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A]
gi|345517722|ref|ZP_08797187.1| GTP-binding protein engB [Bacteroides sp. 4_3_47FAA]
gi|166225943|sp|A6L4J3.1|ENGB_BACV8 RecName: Full=Probable GTP-binding protein EngB
gi|149933909|gb|ABR40607.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254836829|gb|EET17138.1| GTP-binding protein engB [Bacteroides sp. 4_3_47FAA]
gi|294447344|gb|EFG15925.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus
PC510]
gi|317387672|gb|EFV68537.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + + CP+D+ PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 2 EILSAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK WY+VDLPGYG+A + Y L RE + + +LID + PQK
Sbjct: 62 INHFLINKEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N +P + +FTK DK+ K + +N+ + + + E + PP ++SS
Sbjct: 122 IDLEFMEWLGENGVPFSIIFTKADKLTNGKVK---DNVNKYLKKLTEQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR E+L ++ +
Sbjct: 179 EKKTGRQEILDYIDSI 194
>gi|340354163|ref|ZP_08676954.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella pallens
ATCC 700821]
gi|339607435|gb|EGQ12370.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella pallens
ATCC 700821]
Length = 204
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKSSEFTLSSPSITKCPVDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WYIVDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++NIP + VFTK DK+ V K + N +++ + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGQSNIPFSIVFTKADKLSVGKAK---ANAEAWIKQLEDTWETTPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G++ELL ++ +
Sbjct: 180 KKSGKEELLNYIEAI 194
>gi|387132003|ref|YP_006297976.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella intermedia
17]
gi|386374851|gb|AFJ07638.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella intermedia
17]
Length = 204
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKTSEFSISSPTISKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WYIVDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++NIP + +FTK DK+ G + N +++ + + + + PP+ +TSS
Sbjct: 123 DREFIDWLGQSNIPFSIIFTKADKL---SGGKAKANAEAWMKKLEDTWEITPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+ +GR+E+L ++ +
Sbjct: 180 SKVGREEVLGYIESI 194
>gi|288800196|ref|ZP_06405655.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 299 str. F0039]
gi|288333444|gb|EFC71923.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 299 str. F0039]
Length = 203
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV SS CP D++ E+A +GRSNVGKSSLIN L K LA TS KPGKT L
Sbjct: 2 EIKKSEFVVSSPTVSKCPTDNKYEYAFIGRSNVGKSSLINMLCTHKGLAKTSSKPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYG+AK + Y L RE L+ + +LID P QK
Sbjct: 62 INHFIINNEWYLVDLPGYGYAKQSKAVQKKLQQMISQYILQREQLINLFVLIDIRHPQQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG + +P T +FTK DK+ ++ N ++ + +++ + PP+ +TS+
Sbjct: 122 IDREFIDWLGASQVPFTIIFTKADKLGPVAAQK---NASAWMRALQDAWEELPPYFITSA 178
Query: 198 VTGLGRDELLLHMSQL 213
G++E+L ++SQ+
Sbjct: 179 EKKTGKEEVLNYISQI 194
>gi|88801296|ref|ZP_01116824.1| GTP-binding protein [Polaribacter irgensii 23-P]
gi|88781954|gb|EAR13131.1| GTP-binding protein [Polaribacter irgensii 23-P]
Length = 203
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ P + PE+A +GRSNVGKSSLIN L+ +K+LA S KPGKTQL
Sbjct: 2 KIKSAEFIMSNSNVMKAPTERMPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N+ W++VDLPGYG+A R+ + F + YF RE LV +LID+ PQK
Sbjct: 62 INHFKINEEWFLVDLPGYGYASVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD +LG N IP +FTK DK+ +K ++ I S+++ + +++ P +TSS
Sbjct: 122 IDLDFMQFLGENQIPFCIIFTKADKLGSSK---LNKQITSYKKKLLQHWETLPTSFLTSS 178
Query: 198 VTGLGRDELL 207
T LGR E L
Sbjct: 179 NTSLGRTEFL 188
>gi|436833740|ref|YP_007318956.1| putative GTP-binding protein engB [Fibrella aestuarina BUZ 2]
gi|384065153|emb|CCG98363.1| putative GTP-binding protein engB [Fibrella aestuarina BUZ 2]
Length = 211
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 13/210 (6%)
Query: 13 YAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKP 72
Y +I + EFV S+ CPK DRPE+A +GRSNVGKSSLIN LV +++LA TS KP
Sbjct: 3 YLCTMKIHQAEFVISNSDPAKCPKPDRPEYAFIGRSNVGKSSLINRLV-QRDLAKTSGKP 61
Query: 73 GKTQLINHFLVNK---------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLV 123
GKTQLINHF +N +WY+VDLPGYG+AK P R ++ Y RE+L
Sbjct: 62 GKTQLINHFSINSGKLTPKGETAWYLVDLPGYGYAKVPKNVRDQFAGMISTYLTGRENLR 121
Query: 124 GVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIR 183
+ +LID +PPQ+IDLD LG +P VFTK +K+K G R ++ + +
Sbjct: 122 CIFVLIDMRIPPQQIDLDFITRLGEERLPFVLVFTKAEKLK--SGAR-STALEIYHAAVA 178
Query: 184 ENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ + P + +TS+ TG GRDE+L ++ +
Sbjct: 179 QIFDTFPTYFITSATTGEGRDEILAYLDDM 208
>gi|260911896|ref|ZP_05918462.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 472 str. F0295]
gi|260634012|gb|EEX52136.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 472 str. F0295]
Length = 201
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F S+ CPKD++ E+A +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKSAFTLSAPSIGLCPKDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N SWY+VDLPGYGFAK + Y L RE LV + +LID QKI
Sbjct: 63 NHFIINDSWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG + +P T VFTK DK+ + K + +N + + + + +++ PP+ +TSS
Sbjct: 123 DREFIDWLGESGVPFTIVFTKADKLGLVKAK---QNAEKWMKQLEDSWEEQPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+GR+ELL ++ ++
Sbjct: 180 KRIGREELLNYIDEI 194
>gi|325298117|ref|YP_004258034.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170]
gi|324317670|gb|ADY35561.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170]
Length = 200
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 119/190 (62%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV S+ RA CP+ + PE+A +GRSNVGKSSLIN L +LA+TS PGKT L
Sbjct: 2 EITSAKFVISNSRADMCPEGNLPEYAFIGRSNVGKSSLINMLTNHSKLAMTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+A+ + + Y L R + + +LID+ + PQK
Sbjct: 62 INHFLINNSWYLVDLPGYGYAQRGKKVMEQIKNIIQHYVLERMQMTCLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N++P VFTK DK + K + +N++ F ++E + P + +TS+
Sbjct: 122 IDLEFIEWLGENSVPFALVFTKADKQNIVKTQ---QNVERFLNTLKEQWEELPAYFITSA 178
Query: 198 VTGLGRDELL 207
GR E+L
Sbjct: 179 EKKTGRKEVL 188
>gi|381187404|ref|ZP_09894968.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
gi|379650532|gb|EIA09103.1| GTP-binding protein EngB [Flavobacterium frigoris PS1]
Length = 206
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CPKD PE+A +GRSNVGKSSLIN L K+LA TS +PGKTQL
Sbjct: 2 KINTAEFVISNSDVSKCPKDFLPEYAFIGRSNVGKSSLINMLTNHKKLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N +W++VDLPGYG+AK T+ + F YF RE LV +LID Q
Sbjct: 62 INHFIINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ-LIRENYPHHPPWIMTS 196
ID++ +++G + IP VFTK DK+ K D +I ++++ + N+ P + +TS
Sbjct: 122 IDIEFMSYMGESEIPFCIVFTKADKISKVK---IDSHIAAYKKNMFANNWAEMPHYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
+ LG++ELL ++ ++
Sbjct: 179 ATESLGKEELLTYIEEV 195
>gi|224024430|ref|ZP_03642796.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM
18228]
gi|224017652|gb|EEF75664.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM
18228]
Length = 204
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ RA CP PE+A +GRSNVGKSSLIN L ++ +LA+TS PGKT L
Sbjct: 2 EITSAEFVVSNSRADMCPATHLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFLVNK WY+VDLPGYG+A+ + Y L RE + + +L+D+ + PQK
Sbjct: 62 INHFLVNKEWYLVDLPGYGYAQRGKKMMDKIEKLIQHYVLEREQMTCLFVLVDSRLAPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID++ WLG N +P +FTK DK K R N+ + + + + PP+ ++S+
Sbjct: 122 IDMEFIEWLGENGVPFAIIFTKADKQSAGKTR---ANVDIYLSELSKQWEELPPYFISSA 178
Query: 198 VTGLGRDELLLHMSQLRN 215
GR E+L ++ Q+ +
Sbjct: 179 EKKTGRKEILDYIEQINH 196
>gi|298484198|ref|ZP_07002363.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22]
gi|298269611|gb|EFI11207.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22]
Length = 201
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRMDILNYIENI 194
>gi|293373048|ref|ZP_06619417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CMC 3f]
gi|423298018|ref|ZP_17276078.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL03T12C18]
gi|292632116|gb|EFF50725.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CMC 3f]
gi|392664655|gb|EIY58193.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL03T12C18]
Length = 201
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELSKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRIDILNYIENI 194
>gi|340349291|ref|ZP_08672311.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
ATCC 33563]
gi|445115980|ref|ZP_21378408.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
F0103]
gi|339612028|gb|EGQ16843.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
ATCC 33563]
gi|444840244|gb|ELX67281.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella nigrescens
F0103]
Length = 204
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKTSEFSISSPSIARCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WYIVDLPGYG+AK+ R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINKEWYIVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++NIP + VFTK DK+ K + N +++ + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGQSNIPFSIVFTKADKLSEGKAK---ANAEAWMEKLEDTWEVTPPYFITSAE 179
Query: 199 TGLGRDELLLHM 210
GR+E+L ++
Sbjct: 180 KKTGREEILDYI 191
>gi|237720986|ref|ZP_04551467.1| GTPase EngB [Bacteroides sp. 2_2_4]
gi|229449821|gb|EEO55612.1| GTPase EngB [Bacteroides sp. 2_2_4]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRVDILNYIENI 194
>gi|281419987|ref|ZP_06250986.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM
18205]
gi|281405787|gb|EFB36467.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM
18205]
Length = 201
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 117/196 (59%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF S+ R CPKD + E+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFTISAPRVSMCPKDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK + Y L R+ L V +LID QK
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKTVQKQLEQMISSYILQRQQLANVFVLIDVRHDQQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG + +P VFTK DK+ K R N + + + + + PP+ +TSS
Sbjct: 122 IDREFVDWLGESGVPFCIVFTKADKLGPVKARM---NAEKWMHALEDRWEALPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQL 213
LGRDE+L ++ ++
Sbjct: 179 EKKLGRDEVLDYIDEI 194
>gi|163752987|ref|ZP_02160111.1| GTP-binding protein [Kordia algicida OT-1]
gi|161326719|gb|EDP98044.1| GTP-binding protein [Kordia algicida OT-1]
Length = 202
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ CP++ PE+A +GRSNVGKSSLIN L ++K LA TS +PGKTQL
Sbjct: 2 KIKSAEFVMSNSDVAKCPRNKIPEYAFIGRSNVGKSSLINMLTQRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N W++VDLPGYG+A+ + + F YF R LV +L+D PQK
Sbjct: 62 INHFKINDEWFLVDLPGYGYARVSKSAKKVFQKFITEYFRKRTQLVCGFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
+DL+ WLG N IP VFTK DK++ ++ D+++ ++ ++L+ + + P +TS
Sbjct: 122 VDLEFMQWLGENQIPFCIVFTKADKLRPSQ---IDKHVNAYREKLLEDVWEEMPQHFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S +GR+ELL + Q+
Sbjct: 179 SSKAIGREELLDFIGQI 195
>gi|295084381|emb|CBK65904.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bacteroides
xylanisolvens XB1A]
Length = 201
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRMDILNYIENI 194
>gi|160886050|ref|ZP_02067053.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483]
gi|336416323|ref|ZP_08596658.1| GTP-binding protein engB [Bacteroides ovatus 3_8_47FAA]
gi|423286962|ref|ZP_17265813.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL02T12C04]
gi|156108863|gb|EDO10608.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
ATCC 8483]
gi|335938740|gb|EGN00624.1| GTP-binding protein engB [Bacteroides ovatus 3_8_47FAA]
gi|392673794|gb|EIY67249.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus
CL02T12C04]
Length = 201
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRIDILNYIENI 194
>gi|262407938|ref|ZP_06084486.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_22]
gi|294646716|ref|ZP_06724339.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CC 2a]
gi|294807755|ref|ZP_06766548.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens SD CC 1b]
gi|345511587|ref|ZP_08791127.1| GTP-binding protein engB [Bacteroides sp. D1]
gi|423213360|ref|ZP_17199889.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens CL03T12C04]
gi|229443982|gb|EEO49773.1| GTP-binding protein engB [Bacteroides sp. D1]
gi|262354746|gb|EEZ03838.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp.
2_1_22]
gi|292637876|gb|EFF56271.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD
CC 2a]
gi|294445191|gb|EFG13865.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens SD CC 1b]
gi|392693820|gb|EIY87050.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides
xylanisolvens CL03T12C04]
Length = 201
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG R NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGRLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRVDILNYIENI 194
>gi|305664545|ref|YP_003860832.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
gi|88708562|gb|EAR00798.1| putative GTP-binding protein [Maribacter sp. HTCC2170]
Length = 203
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK +FV S+ CP + PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSADFVMSNSDVAKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ + + + YF+ R+ LV +L+D PQK
Sbjct: 62 INHFKINGNWFLVDLPGYGYARVSKKDKRTFQKYITDYFIKRKQLVSAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
+D++ +LG N IP + +FTK DK+ K ++ + N+ S+ ++L+ + P + +TS
Sbjct: 122 VDMEFMEYLGENMIPFSIIFTKADKL---KPKQMEANVNSYVKELLNGVWEEAPNYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S +GRDELL ++ +
Sbjct: 179 SSKNMGRDELLHYIESI 195
>gi|392389966|ref|YP_006426569.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521044|gb|AFL96775.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ornithobacterium
rhinotracheale DSM 15997]
Length = 217
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV+S+ + CP DRPE+A +GRSNVGKSSLIN L K+LA TS PGKTQL
Sbjct: 2 KITSAKFVESNSDWRKCPAPDRPEYAFIGRSNVGKSSLINMLADNKKLAKTSGTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+NHFL+N WY+VDLPGYG+A+ TR +S GY LNR++L+ + +L+DA P K
Sbjct: 62 VNHFLINGEWYLVDLPGYGYAQVSKKTRKKFSELITGYILNRKNLINLYVLVDARHDPMK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +L + IP + V TK DK+ + + N+ +Q+ + + PP+ TS+
Sbjct: 122 IDLEFMEFLSKKGIPFSIVLTKIDKLSSSALAK---NLMKYQKKMLNTWQTLPPFYKTSA 178
Query: 198 VTGLGRDELL 207
+ +G++ELL
Sbjct: 179 TSKVGKEELL 188
>gi|392964182|ref|ZP_10329603.1| ribosome biogenesis GTP-binding protein YsxC [Fibrisoma limi BUZ 3]
gi|387847077|emb|CCH51647.1| ribosome biogenesis GTP-binding protein YsxC [Fibrisoma limi BUZ 3]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ +FV S+ CP DRPE+A +GRSNVGKSSLIN L + LA S KPGKTQLI
Sbjct: 3 VKQAQFVISNSDPAKCPAPDRPEYAFIGRSNVGKSSLINMLTSRTSLAKISGKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL++ WY+VDLPGYG+A+ R +++ GY R +L+ +L+D+ + PQKI
Sbjct: 63 NHFLIDNEWYLVDLPGYGYAQVSKTERDKFAALINGYLTTRSNLLCTFVLVDSRIAPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD LG IP V TK +K+ K + ++ ++ + E + P I+TS++
Sbjct: 123 DLDFMTNLGEQGIPFVIVMTKSEKLSATKLQ---ATLEQYRATLLETWEEAPQIIVTSAI 179
Query: 199 TGLGRDELLLHMSQL 213
T GR+E+L + L
Sbjct: 180 TAAGREEVLALIHSL 194
>gi|323345334|ref|ZP_08085557.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis
ATCC 33269]
gi|323093448|gb|EFZ36026.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis
ATCC 33269]
Length = 199
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 119/196 (60%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ CP D++PE+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSEFVISAPTIGKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYGFAK + Y L RE L V +LID P
Sbjct: 62 INHFIINNEWYLVDLPGYGFAKRSKSVQKQLQQMISSYILQREQLANVFVLIDIRHDPMT 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG ++IP FTK DK+ + K R +N + + + +++ + PP+ +TS+
Sbjct: 122 IDREFIDWLGESSIPFAIAFTKADKLGLVKAR---QNAEKWMKTLQDRWETLPPYFITSA 178
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ +
Sbjct: 179 EKKQGRDEILEYIESI 194
>gi|395218427|ref|ZP_10402078.1| HSR1-like GTP-binding protein [Pontibacter sp. BAB1700]
gi|394454469|gb|EJF09119.1| HSR1-like GTP-binding protein [Pontibacter sp. BAB1700]
Length = 200
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IKE +F+ S+ R CP+ ++PE+A +GRSNVGKSSLIN L +K LA TS+ PGKTQLI
Sbjct: 3 IKEAKFLISNTRVDLCPEPNKPEYAFIGRSNVGKSSLINMLTEQKGLAKTSQSPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+AK +R W Y RE+L V +LID+ P K+
Sbjct: 63 NHFLINDQWYLVDLPGYGYAKVSKESREQWRKMINYYMQKRENLTCVFVLIDSRHEPMKV 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD LG +P VFTK DK K D I ++ + ++E + P TS+
Sbjct: 123 DLDFMQHLGELGVPFVIVFTKTDKQSATK---TDSTIAAYARKMQETWDELPRMFKTSAE 179
Query: 199 TGLGRDELLLHMSQL 213
GR+E+L + ++
Sbjct: 180 KRTGREEILQFIEEV 194
>gi|374372859|ref|ZP_09630520.1| GTP-binding protein engB [Niabella soli DSM 19437]
gi|373234935|gb|EHP54727.1| GTP-binding protein engB [Niabella soli DSM 19437]
Length = 211
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 124/208 (59%), Gaps = 15/208 (7%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++KSS CPK DRPE+A +GRSNVGKSSLIN L KK LA TS PGKTQL
Sbjct: 2 EIISATYIKSSPDYGQCPKADRPEYAFIGRSNVGKSSLINMLCNKKALAKTSAAPGKTQL 61
Query: 78 INHFLV------------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
INHF + + WY+VDLPGYG+AK R WS+ + Y L RE+L+ +
Sbjct: 62 INHFEIISATRDKSGKQEKRPWYLVDLPGYGYAKVSQKQRKSWSAMIEKYILKRENLITL 121
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
+LID+ PQ IDL+ N LG +IP VFTK DK K R N+ +F +RE
Sbjct: 122 FVLIDSRHEPQLIDLEFINQLGAWSIPFALVFTKADKNKPGATIR---NVDAFLNKLRET 178
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ PP +TS++ GR+E+L ++ +L
Sbjct: 179 WEALPPHFITSAIDKNGREEVLEYVGKL 206
>gi|325269826|ref|ZP_08136436.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
multiformis DSM 16608]
gi|324987799|gb|EGC19772.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
multiformis DSM 16608]
Length = 199
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKKSEFTISSPSIARCPSDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +NIP + +FTK DK+ +K + N + + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGESNIPFSIIFTKADKLSPSKAK---SNALLWMKKLEDRWEALPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQLRN 215
T G++E+L ++ Q+ N
Sbjct: 180 TKAGKEEVLDYIEQINN 196
>gi|298373028|ref|ZP_06983018.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral
taxon 274 str. F0058]
gi|298275932|gb|EFI17483.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral
taxon 274 str. F0058]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI E EFV S+ + CP+ D E A +GRSNVGKSSLIN L KK+LA TS KPGKT L
Sbjct: 2 QINEAEFVISNSDFRRCPQGDTTEVAFIGRSNVGKSSLINYLTGKKDLAKTSSKPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK ++IVDLPGYGFAK R + Y + R L + +L+D+ + PQ
Sbjct: 62 INHFLINKRFHIVDLPGYGFAKVSKTHREKLRKIIEDYIMFRPQLANLFVLLDSRLSPQA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG +P + VFTK DK + R +NI++++ + E + PP MTSS
Sbjct: 122 IDLEFMEWLGLGGVPFSIVFTKTDKQSRS---RLMQNIETYRTKLYETWESLPPIFMTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR+E+L ++ ++
Sbjct: 179 EKREGREEILDYIEKI 194
>gi|288927638|ref|ZP_06421485.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 317 str. F0108]
gi|288330472|gb|EFC69056.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 317 str. F0108]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F S+ + CP D++ E+A +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKSAFTLSAPSIRLCPTDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N SWY+VDLPGYGFAK + Y L RE LV + +LID QKI
Sbjct: 63 NHFIINDSWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG + +P T VFTK DK+ + K + +N + + + + +++ PP+ +TSS
Sbjct: 123 DREFIDWLGESGVPFTIVFTKADKLGLVKAK---QNAEKWMKQLEDSWEELPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
+GR+ELL ++ ++
Sbjct: 180 KRIGREELLNYIDEI 194
>gi|383810573|ref|ZP_09966067.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 306 str. F0472]
gi|383356941|gb|EID34431.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral
taxon 306 str. F0472]
Length = 199
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKKSEFTISSPSLSKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + +++ + PP+ +TSS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLQDRWEVLPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
GRDE+L ++ Q+
Sbjct: 180 DKTGRDEVLDYIDQI 194
>gi|260592424|ref|ZP_05857882.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis
F0319]
gi|260535660|gb|EEX18277.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis
F0319]
Length = 199
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKKSEFTISSPSLAKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + +++ + PP+ +TSS
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLQDRWEVLPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
GRDE+L ++ Q+
Sbjct: 180 DKAGRDEVLDYIDQI 194
>gi|345879820|ref|ZP_08831387.1| GTP-binding protein engB [Prevotella oulorum F0390]
gi|343920160|gb|EGV30898.1| GTP-binding protein engB [Prevotella oulorum F0390]
Length = 198
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ FV S+ CP DD+ E+A +GRSNVGKSSLIN L K LA TS PGKT L
Sbjct: 2 EIKKSAFVVSAPTVSKCPNDDKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N WY+VDLPGYG+AK + GY L R+ LV V +LID PQK
Sbjct: 62 INHFIINDEWYLVDLPGYGYAKRSKTVQQKLEQMISGYILQRKQLVNVFVLIDVRHDPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
ID + +WLG + +P +FTK DK+ K + N + + +++ + PP+ +TSS
Sbjct: 122 IDREFIDWLGESGVPFAIIFTKADKLGPGKAKM---NAQQWMNALKDRWETLPPYFITSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
LGRD +L ++ + +
Sbjct: 179 EKKLGRDAVLDYIDTINH 196
>gi|336398689|ref|ZP_08579489.1| GTP-binding protein engB [Prevotella multisaccharivorax DSM 17128]
gi|336068425|gb|EGN57059.1| GTP-binding protein engB [Prevotella multisaccharivorax DSM 17128]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I E+ SS CPKD R EFA +GRSNVGKSSLIN L + K LA TS PGKT LI
Sbjct: 3 ITTAEYSVSSPTVSHCPKDHRAEFAFIGRSNVGKSSLINMLCQHKGLAKTSAVPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N+ WY+VDLPGYG+AK R + Y L RE L V +LID + QKI
Sbjct: 63 NHFIINREWYLVDLPGYGYAKRSKTDRDKLDRMIRSYILQREELSNVFVLIDIRLEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG + IP + +FTK DK+ V+K + N +++ + + + P + +TS+
Sbjct: 123 DREFVDWLGASGIPFSIIFTKADKLSVSKAK---ANAQAWMNALLDTWESLPTYFITSAD 179
Query: 199 TGLGRDELLLHMSQLRN 215
GR+E+L ++ Q+ N
Sbjct: 180 RRTGREEVLDYIGQILN 196
>gi|307566351|ref|ZP_07628790.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS
21A-A]
gi|307344928|gb|EFN90326.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS
21A-A]
Length = 201
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP D++PE+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKDSEFTISSPTVFKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WY+VDLPGYG+AK+ R Y L R+ L+ V +LID Q I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKSSKSVRNKLEQMIAQYILQRKQLINVFVLIDIRHEQQTI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++NIP + +FTK DK+ K + N + + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGKSNIPFSIIFTKADKLTTGKAK---SNALLWMRKLEDTWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G++E+L ++ +
Sbjct: 180 KKTGKEEVLNYIESI 194
>gi|302346369|ref|YP_003814667.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica ATCC 25845]
gi|302150963|gb|ADK97224.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica ATCC 25845]
Length = 198
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP+D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK+ R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + +++ + PP+ +TS+
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLQDRWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
GR+E+L ++ ++
Sbjct: 180 NKTGREEVLNYIDEI 194
>gi|288802585|ref|ZP_06408024.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica D18]
gi|288335113|gb|EFC73549.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella
melaninogenica D18]
Length = 198
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP+D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK+ R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNDWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + +++ + PP+ +TS+
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLQDRWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
GR+E+L ++ ++
Sbjct: 180 NKTGREEVLNYIDEI 194
>gi|325954327|ref|YP_004237987.1| GTP-binding protein engB [Weeksella virosa DSM 16922]
gi|323436945|gb|ADX67409.1| GTP-binding protein engB [Weeksella virosa DSM 16922]
Length = 205
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
++ EF+KS+ KDCPK D PE+A +GRSNVGKSSLIN L K++LA TS PGKTQL+
Sbjct: 3 VQSAEFIKSAQTYKDCPKPDLPEYAFIGRSNVGKSSLINMLTNKRDLAKTSGTPGKTQLL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +WY+ DLPGYG+AK R + Y R +LV +L+D+ PQK
Sbjct: 63 NTFLINSNWYLTDLPGYGYAKVSKTNRAGFERMIYDYLEFRTNLVCTFVLVDSRHEPQKN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL WLG IP +FTK DK+ AK ++ N+ ++++ + + + P TSS
Sbjct: 123 DLKFMEWLGHKQIPFAIIFTKLDKLSSAKFQK---NLNTYKRELLKTWEDLPMIFATSSS 179
Query: 199 TGLGRDELLLHMSQL 213
+ +GR+ELL +++ L
Sbjct: 180 SFIGRNELLDYINTL 194
>gi|409198030|ref|ZP_11226693.1| GTP-binding protein YsxC [Marinilabilia salmonicolor JCM 21150]
Length = 199
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E F+ SS KDCP ++PE+A +GRSNVGKSSL+N L +++LA S PGKT+L
Sbjct: 2 RITEASFLTSSANPKDCPAPNKPEYAFIGRSNVGKSSLLNMLCDRRKLAKISGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N SWY+VDLPGYG+AK R + +GY +R +L + +LID+ P +
Sbjct: 62 INHFLINNSWYMVDLPGYGYAKLSKSEREKFKKMIEGYLTDRTNLSNLFVLIDSRHAPIQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DLD +G +P VFTK DK+K A+ ++NI +++ + E++ PP +TSS
Sbjct: 122 ADLDFMQNMGIKGVPFAVVFTKTDKLKPAQ---LEDNITKYKERLLEDWEELPPIFLTSS 178
Query: 198 VTGLGRDELLLHMSQL 213
T G++ELL ++ ++
Sbjct: 179 STRQGQEELLSYIEKI 194
>gi|346226485|ref|ZP_08847627.1| ribosome biogenesis GTP-binding protein YsxC [Anaerophaga
thermohalophila DSM 12881]
Length = 197
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + FV SS DCP D+PE+A +GRSNVGKSSL+N L + +LA TS PGKT+LI
Sbjct: 3 ITDAHFVTSSTHPNDCPAPDKPEYAFIGRSNVGKSSLLNMLCNRHKLAKTSGTPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+AK P + ++ Y R +LV + +LID+ P K
Sbjct: 63 NHFLINNKWYMVDLPGYGYAKLPKAQKGTFTKMIDSYLFGRPNLVNLFVLIDSRHSPMKQ 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD LG N+IP + VFTK DK+K ++N +++ + E++ PP TS++
Sbjct: 123 DLDFIFNLGTNSIPFSIVFTKTDKLKPG---VLEKNTNIYKERLLEDWEILPPIFFTSAI 179
Query: 199 TGLGRDELLLHMSQLRN 215
GR+E+L ++ L N
Sbjct: 180 NNRGREEILNYIENLNN 196
>gi|336402582|ref|ZP_08583314.1| GTP-binding protein engB [Bacteroides sp. 1_1_30]
gi|335947979|gb|EGN09726.1| GTP-binding protein engB [Bacteroides sp. 1_1_30]
Length = 201
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ K CP PE+A +GRSNVGKSSLIN L +K LA+TS PGKT L
Sbjct: 2 EITSAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTML 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+NK+WY+VDLPGYG+A+ + + + Y L RE + + +LID+ + PQK
Sbjct: 62 INHFLINKNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WLG N IP + +FTK DK+ KG NI ++ + + + + PP ++SS
Sbjct: 122 IDLEFMEWLGENGIPFSIIFTKADKL---KGGHLKMNINAYLRELGKQWEELPPHFVSSS 178
Query: 198 VTGLGRDELLLHMSQL 213
GR ++L ++ +
Sbjct: 179 EDRTGRVDILNYIENI 194
>gi|284038921|ref|YP_003388851.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale
DSM 74]
gi|283818214|gb|ADB40052.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale
DSM 74]
Length = 201
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ EF S+ CPK DRPE+A +GRSNVGKSSLIN L + LA S KPGKTQLI
Sbjct: 3 VKQAEFFVSNSDPAKCPKPDRPEYAFIGRSNVGKSSLINMLTSRSSLAKISGKPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF+++ WY+VDLPGYG+A+ R +++ GY +R +L+ + +L+D+ + PQK+
Sbjct: 63 NHFIIDNEWYLVDLPGYGYAQVSKTEREKFAALIDGYLTSRPNLLCIFVLVDSRIAPQKL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD LG +P VFTK +K+ K + +++++ + E++ P + +TS+V
Sbjct: 123 DLDFMANLGERGLPFVIVFTKTEKLGPTKLQ---ATLETYRDRLLEDWEEAPQFFVTSAV 179
Query: 199 TGLGRDELLLHMSQL 213
T +GR+++L + L
Sbjct: 180 TAVGREDILSFIRPL 194
>gi|254494964|ref|ZP_01052919.2| GTPase of unknown function [Polaribacter sp. MED152]
gi|213690546|gb|EAQ42347.2| GTPase of unknown function [Polaribacter sp. MED152]
Length = 194
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 119/181 (65%), Gaps = 3/181 (1%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ + PKD PE+A +GRSNVGKSSLIN L+ +K+LA S KPGKTQLINHF +N +
Sbjct: 2 SNSNVINAPKDRIPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLINHFKINDN 61
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
W++VDLPGYG+A+ R+ + F + YF RE LV +LID+ PQKIDLD +L
Sbjct: 62 WFLVDLPGYGYAQVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQKIDLDFMRFL 121
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDEL 206
G N IP VFTK DK+ +K ++ I S+++ + +++ P +TSS TGLGR E
Sbjct: 122 GENQIPFCLVFTKADKLGSSK---LNKQITSYKKKLLQHWETLPMTFLTSSSTGLGRKEF 178
Query: 207 L 207
L
Sbjct: 179 L 179
>gi|399925393|ref|ZP_10782751.1| GTP-binding protein YsxC, partial [Myroides injenensis M09-0166]
Length = 204
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 119/196 (60%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ A CP + PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KINTAEFVVSNSEASKCPNEPIPEYAFIGRSNVGKSSLINMLTNSKYLAKTSSRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +WY+VDLPGYG+AK T+ + F YF R+ LV +LID QK
Sbjct: 62 INHFKINSNWYLVDLPGYGYAKVSKKTKSVFQKFITDYFEKRQQLVSAFVLIDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG + IP + +FTK DK+ K K + ++ N+ PP+ +TSS
Sbjct: 122 IDLEFMQYLGESEIPFSIIFTKADKVGKQKVHSLVAAYK--KAMLANNWAEMPPYFVTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
GRD++L ++ ++
Sbjct: 180 EHKTGRDDVLDYIDEV 195
>gi|340348100|ref|ZP_08671194.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella dentalis
DSM 3688]
gi|433652943|ref|YP_007296797.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella
dentalis DSM 3688]
gi|339608016|gb|EGQ12937.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella dentalis
DSM 3688]
gi|433303476|gb|AGB29291.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella
dentalis DSM 3688]
Length = 204
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ +FV S+ CP D +PEFA +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKQAQFVVSAPTVSKCPGDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK + Y L RE L V +L+D Q +
Sbjct: 63 NHFIINGEWYLVDLPGYGYAKRSKTVQQQLDRMIHSYMLQREQLTCVFVLVDVRHEQQLV 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG + +P +FTK DK+ K R +N +++ +L+ + PP+ +TSS
Sbjct: 123 DREFVDWLGASGVPFAIIFTKADKLGRVKAR---DNAEAWMKLLHSTWEELPPYFITSSE 179
Query: 199 TGLGRDELL 207
GRDE+L
Sbjct: 180 KKTGRDEVL 188
>gi|399032400|ref|ZP_10731869.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
gi|398069252|gb|EJL60619.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flavobacterium
sp. CF136]
Length = 206
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 121/197 (61%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ CP+D PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KINTAEFIISNSEVSKCPQDFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF RE LV +LID Q
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKSVFQQFITDYFETREQLVCAFVLIDIRHEAQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF-QQLIRENYPHHPPWIMTS 196
ID++ +++G + IP +FTK DK+ K D +I ++ +Q+ N+ P + +TS
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKISKTK---VDSHIAAYKKQMFANNWEEMPHYFVTS 178
Query: 197 SVTGLGRDELLLHMSQL 213
+ G++ELL ++ ++
Sbjct: 179 ATESTGKEELLSYIDEV 195
>gi|345884488|ref|ZP_08835894.1| GTP-binding protein engB [Prevotella sp. C561]
gi|345042700|gb|EGW46794.1| GTP-binding protein engB [Prevotella sp. C561]
Length = 199
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF SS CP+D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFTISSPSLAKCPEDSKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK+ R Y L R+ LV V +LID QKI
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +N+P + +FTK DK+ AK + N + + +++ + PP+ +TS+
Sbjct: 123 DREFVDWLGESNVPFSIIFTKADKLSPAKAK---SNALLWMKKLQDRWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G++E+L ++ ++
Sbjct: 180 NKTGKEEVLDYIDRI 194
>gi|406025117|ref|YP_006705418.1| GTP-binding protein EngB [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404432716|emb|CCM09998.1| Probable GTP-binding protein EngB [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
Length = 201
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 117/190 (61%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I V V SS R + CP++ RPE A +GRSNVGKSSLINAL+++K+LA SK PGKT+L
Sbjct: 2 KIHSVRLVSSSARYQACPREARPEVAFIGRSNVGKSSLINALLQRKQLARVSKMPGKTKL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
I+HFLVN Y VDLPGYG+A+ T++ W + Y L R ++V V LL+DA + Q
Sbjct: 62 IHHFLVNNQIYFVDLPGYGWAQVGRATKIQWEKMLQSYLLYRPNMVTVFLLMDAKIGLQS 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL C WLG + IP V TK DK R ++ + ++E++ PP M S+
Sbjct: 122 IDLGCIGWLGVHRIPFVIVLTKADK---KNKRVVQKHYMALTATLQEDWATIPPIFMVSA 178
Query: 198 VTGLGRDELL 207
+G + LL
Sbjct: 179 HDRVGLENLL 188
>gi|110639099|ref|YP_679308.1| ribosome biogenesis GTP-binding protein YsxC [Cytophaga
hutchinsonii ATCC 33406]
gi|119369188|sp|Q11RJ8.1|ENGB_CYTH3 RecName: Full=Probable GTP-binding protein EngB
gi|110281780|gb|ABG59966.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 199
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+F+ S + CP+ +PE+A +GRSNVGKSSLIN+L K LA+TS KPGKTQLIN F
Sbjct: 5 AKFISSYDDYQKCPEITKPEYAFIGRSNVGKSSLINSLTGVKNLAMTSSKPGKTQLINLF 64
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+ ++W + DLPGYGFAKA +R+ W Y NR +L V LL+D+ P K DL+
Sbjct: 65 TIEETWILADLPGYGFAKASQSSRIKWGRMVHDYLKNRTNLTTVFLLVDSRHEPMKSDLE 124
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
WL N IP + +FTK DK + + + + S+ +++ EN+ P +TSS +G
Sbjct: 125 QITWLASNGIPFSLIFTKIDKQSLTQTNKI---LASWTKVLSENWEELPKMFLTSSESGK 181
Query: 202 GRDELLLHMSQL 213
G +ELL ++ ++
Sbjct: 182 GTEELLTYIDEI 193
>gi|325286915|ref|YP_004262705.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489]
gi|324322369|gb|ADY29834.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489]
Length = 206
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FV S+ K CP + PE+A +GRSNVGKSSLIN L+++K LA TS +PGKTQL
Sbjct: 2 KIKSASFVISNSNVKSCPSEPLPEYAFIGRSNVGKSSLINMLMQRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF VN++W++VDLPGYG+A+ + + + YF R LV +L+D PQK
Sbjct: 62 INHFKVNENWFLVDLPGYGYARVSKKEKKTFQKYITDYFKERIQLVCAFVLVDIRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK-VAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+DL+ W+G N IP +FTK DK+K ++ D I + + I E+ P + +TS
Sbjct: 122 VDLEFLEWMGENQIPFALIFTKADKLKPQVIQKQADNYINALLEGIWEDAPQ---YFITS 178
Query: 197 SVTGLGRDELL 207
S LGR+++L
Sbjct: 179 SANNLGREDVL 189
>gi|282858564|ref|ZP_06267735.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia
JCVIHMP010]
gi|282588689|gb|EFB93823.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia
JCVIHMP010]
Length = 201
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF S+ CP+D++PE+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WY+VDLPGYG+AK R Y L R+ L+ V +LID Q I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHEQQTI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++N+P + +FTK DK+ + + N + + + + + PP+ +TS+
Sbjct: 123 DREFIDWLGKSNVPFSIIFTKADKLTAGRAK---SNALLWMKKLEDTWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G++E+L ++ +
Sbjct: 180 KKTGKEEVLDYIESI 194
>gi|85816839|gb|EAQ38024.1| GTPase of unknown function [Dokdonia donghaensis MED134]
Length = 201
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FV S+ CP PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSATFVVSNSEVSKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N++W++VDLPGYG+A+ + + F YF RE ++ +L+D PQK
Sbjct: 62 INHFLINENWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN-YPHHPPWIMTS 196
ID++ ++G IP + +FTK DK++ R NI+ +++++ E + P + ++S
Sbjct: 122 IDMEFMEYMGEKEIPFSIIFTKADKLRPQALER---NIEEYKRIMLEGVWWEFPNYFVSS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S G G+DE+L ++ ++
Sbjct: 179 SSDGTGQDEILNYIEEI 195
>gi|261879389|ref|ZP_06005816.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis
DSM 17361]
gi|270333957|gb|EFA44743.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis
DSM 17361]
Length = 205
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ +FV S+ + CP+D +PEFA +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKQAQFVISAPTVEKCPRDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF+++K WY+VDLPGYG+AK + Y L R+ L+ + +LID QKI
Sbjct: 63 NHFIIDKEWYLVDLPGYGYAKRSKSVIEKIDKMIQTYILQRKQLINLFVLIDVRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG + IP + +FTK DK+ K + +N ++ + +++ PP+ +TSS
Sbjct: 123 DREFIDWLGISGIPFSIIFTKADKLGRVKAK---QNADAWMNALLDSWEELPPYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
GRDE+L ++ ++
Sbjct: 180 KKTGRDEVLDYIGKV 194
>gi|424899417|ref|ZP_18322959.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella bivia
DSM 20514]
gi|388591617|gb|EIM31856.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Prevotella bivia
DSM 20514]
Length = 206
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF S+ CP+D++PE+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKNSEFTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++NK WY+VDLPGYG+AK R Y L R+ L+ V +LID Q I
Sbjct: 63 NHFIINKEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHEQQTI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG++N+P + +FTK DK+ + + N + + + + + PP+ +TS+
Sbjct: 123 DREFIDWLGKSNVPFSIIFTKADKLTAGRAK---SNALLWMKKLEDTWEELPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G++E+L ++ +
Sbjct: 180 KKTGKEEVLDYIESI 194
>gi|325856392|ref|ZP_08172108.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
CRIS 18C-A]
gi|327312485|ref|YP_004327922.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
F0289]
gi|325483576|gb|EGC86548.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
CRIS 18C-A]
gi|326944463|gb|AEA20348.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola
F0289]
Length = 199
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 117/195 (60%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF SS CP D + E+A +GRSNVGKSSLIN L K LA TS KPGKT LI
Sbjct: 3 IKKSEFTISSPSVSRCPADTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF++N WY+VDLPGYG+AK R Y L R+ LV V +LID Q I
Sbjct: 63 NHFIINNEWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHEQQTI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG +NIP + +FTK DK+ AK + N + + + + + PP+ +TS+
Sbjct: 123 DREFVDWLGGSNIPFSIIFTKADKLSPAKAK---SNALMWMKKLEDRWETLPPYFITSAE 179
Query: 199 TGLGRDELLLHMSQL 213
G+DE+L ++ Q+
Sbjct: 180 KKEGKDEILDYIEQI 194
>gi|163787480|ref|ZP_02181927.1| GTP-binding protein [Flavobacteriales bacterium ALC-1]
gi|159877368|gb|EDP71425.1| GTP-binding protein [Flavobacteriales bacterium ALC-1]
Length = 204
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 121/190 (63%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK +FV S+ CPKD PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSAKFVVSNSEVAKCPKDSLPEYAFIGRSNVGKSSLINMLTDRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N+SWY+VDLPGYG+A+ ++ + F YF R+ L+ +L+D PQ
Sbjct: 62 INHFIINESWYLVDLPGYGYARVSKSSKKKFQKFITNYFEKRQQLISAFVLVDIRHKPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG + IP +FTK DK+K D ++ ++ + + + + P + +TSS
Sbjct: 122 IDLEFMQYLGESGIPFGIIFTKADKLKPMA---IDRHVNNYCEELLKTWEEVPQYFVTSS 178
Query: 198 VTGLGRDELL 207
+G++++L
Sbjct: 179 SKHIGKEDVL 188
>gi|365959845|ref|YP_004941412.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
gi|365736526|gb|AEW85619.1| GTP-binding protein YsxC [Flavobacterium columnare ATCC 49512]
Length = 208
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ CP++ PE+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 KINTAEFIISNSIVSKCPQERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF RE LV +LID QK
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKEIFQKFITDYFEKREQLVCAFVLIDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ-LIRENYPHHPPWIMTS 196
IDL+ +LG IP +FTK D K++KG + ++N+ ++++ L+ N+ P +TS
Sbjct: 122 IDLEFITYLGEIGIPFCIIFTKAD--KISKG-KTEQNVAAYRKALLANNWEEMPQHFITS 178
Query: 197 SVTGLGRDELL 207
S+ +GRD +L
Sbjct: 179 SLDVVGRDGVL 189
>gi|258647974|ref|ZP_05735443.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae
ATCC 51259]
gi|260851815|gb|EEX71684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae
ATCC 51259]
Length = 204
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 3/202 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF SS R CP PE+A +GRSNVGKSSLIN L + LA TS PGKT L
Sbjct: 2 KINTAEFKISSARLDQCPATMIPEYAFIGRSNVGKSSLINMLTGRSALAKTSSTPGKTLL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF++N W++VDLPGYGFAK R + + Y RE L + +LID+ + PQ
Sbjct: 62 INHFIINDEWFLVDLPGYGFAKRSKKEREELRKMIERYVTRREQLTNLFVLIDSRLRPQT 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG +P + +FTK DK K + N++ F ++E + PP+ ++SS
Sbjct: 122 IDLEFIRFLGEAGVPFSIIFTKADKNKRGVLK---SNVQGFLATLKEEWEELPPYFISSS 178
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
+ LGR+++L ++ Q+ Q
Sbjct: 179 TSKLGREDILNYIEQINGSLQQ 200
>gi|282879591|ref|ZP_06288322.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis
CRIS 5C-B1]
gi|281306539|gb|EFA98568.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis
CRIS 5C-B1]
Length = 199
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 116/195 (59%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + +FV SS CP D R E+A +GRSNVGKSSLIN L + LA TS PGKT LI
Sbjct: 3 ITQAKFVLSSPNLGKCPTDQRIEYAFIGRSNVGKSSLINMLCNHQGLAKTSSTPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+AK + + Y L+RE LV V +LID QKI
Sbjct: 63 NHFLINNDWYLVDLPGYGYAKRSKKVQEEIQKLITTYLLHREQLVNVFVLIDVRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG N IP T +FTK DK+ K + N+ + +++ + P + +TSS
Sbjct: 123 DREFIDWLGLNEIPFTIIFTKADKLGTVKAKM---NVDKWMSQLKDVWEELPRYFITSSE 179
Query: 199 TGLGRDELLLHMSQL 213
GR ELL ++ ++
Sbjct: 180 KKTGRQELLDYIDEI 194
>gi|373501009|ref|ZP_09591377.1| GTP-binding protein engB [Prevotella micans F0438]
gi|371950861|gb|EHO68713.1| GTP-binding protein engB [Prevotella micans F0438]
Length = 200
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF+ S+ K CP+ EFA +GRSNVGKSSLIN L K LA TS PGKT LI
Sbjct: 3 IKKAEFIISAPDFKKCPQHSGLEFAFIGRSNVGKSSLINMLCDHKGLAKTSAMPGKTLLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N W++VDLPGYG+A+ R Y L+RE LV V +LID QKI
Sbjct: 63 NHFLINNEWHLVDLPGYGYARNSKSMRNKLEQMIAQYILHREQLVNVFVLIDIRHEQQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + +WLG+N +P + +FTK DK++ + + N +++ + + + + +PP +TS+
Sbjct: 123 DREFIDWLGKNGVPFSIIFTKADKLRPGQA---NANAQAWLKALDDGWEEYPPHFITSAT 179
Query: 199 TGLGRDELLLHMSQL 213
GRDELL ++ +
Sbjct: 180 NKTGRDELLNYLDDI 194
>gi|344203323|ref|YP_004788466.1| GTP-binding protein engB [Muricauda ruestringensis DSM 13258]
gi|343955245|gb|AEM71044.1| GTP-binding protein engB [Muricauda ruestringensis DSM 13258]
Length = 204
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ CP + PE+A +GRSNVGKSSLIN LV +K LA TS +PGKTQL
Sbjct: 2 KITSAEFVMSNSNVAKCPNEPLPEYAFIGRSNVGKSSLINMLVERKALAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK + + + YF R+ LV +L+D PQ
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKDKRTFQKYITEYFQKRKQLVCGFVLVDIRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL+ WLG N IP +FTK DK+K + + Q+L+ + PP TSS
Sbjct: 122 VDLEFMEWLGTNQIPFAIIFTKADKLKPSVIEKQANTY--LQKLLECAWEEVPPHFTTSS 179
Query: 198 VTGLGRDELL 207
+G++ELL
Sbjct: 180 TNRMGKEELL 189
>gi|374598881|ref|ZP_09671883.1| GTP-binding protein engB [Myroides odoratus DSM 2801]
gi|423322927|ref|ZP_17300769.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 103059]
gi|373910351|gb|EHQ42200.1| GTP-binding protein engB [Myroides odoratus DSM 2801]
gi|404609948|gb|EKB09306.1| ribosome biogenesis GTP-binding protein YsxC [Myroides odoratimimus
CIP 103059]
Length = 206
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I FV S+ CP + PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KINTAAFVMSNSEVSKCPNEPLPEYAFIGRSNVGKSSLINMLTNSKSLAKTSSRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF R LV +LID QK
Sbjct: 62 INHFKINSNWFLVDLPGYGYAKVSKKTKGVFQKFITEYFEKRRQLVSAFVLIDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG + IP +FTK D KV K + P +QL+ + PP+ +TSS
Sbjct: 122 IDLEFMEYLGESGIPFAIIFTKAD--KVGKTKVPQLVADYKKQLLSGIWEEMPPYFITSS 179
Query: 198 VTGLGRDELLLHMSQL 213
GRDE+L ++ +
Sbjct: 180 EDKTGRDEVLNYIDTI 195
>gi|189502027|ref|YP_001957744.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus
5a2]
gi|238692308|sp|B3ES13.1|ENGB_AMOA5 RecName: Full=Probable GTP-binding protein EngB
gi|189497468|gb|ACE06015.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus
5a2]
Length = 210
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+E FV SS K CP D+ E A +GRSNVGKSSL+N ++ +K+LA TS +PGKTQLI
Sbjct: 3 IQEAIFVTSSATYKKCPPADKAEIAFIGRSNVGKSSLVNMILGQKKLAKTSARPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFLVN+ +Y+VDLPGYG+A+A R+ W+ Y L RE+L + +L+D +PPQKI
Sbjct: 63 NHFLVNQKYYLVDLPGYGWAQASKTQRIGWNKMVNQYLLYRENLACLFVLLDIRLPPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL N+L N+IP V TK DK+ ++ + +F++ + + +++TSS
Sbjct: 123 DLLFINFLIDNDIPFAIVLTKADKI---SKQQVVNQLATFKRTLAPSTKESLNYVVTSSK 179
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
G+ E L + Q+ + Q
Sbjct: 180 NQAGKIEALNCIGQIVAGYQQ 200
>gi|332292523|ref|YP_004431132.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter sp.
4H-3-7-5]
gi|332170609|gb|AEE19864.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter sp.
4H-3-7-5]
Length = 203
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 123/197 (62%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FV S+ CP PE+A +GRSNVGKSSLIN L +K LA TS +PGKTQL
Sbjct: 2 KIKSASFVVSNSEVTKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N++W++VDLPGYG+A+ + + F YF RE ++ +L+D PQK
Sbjct: 62 INHFLINENWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN-YPHHPPWIMTS 196
ID++ +LG IP + +FTK DK++ R NI+ +++++ + + P + ++S
Sbjct: 122 IDMEFMEYLGEKEIPFSIIFTKADKLRPQALER---NIEVYKKIMLDGVWWEFPKYFVSS 178
Query: 197 SVTGLGRDELLLHMSQL 213
+ G G+DE+L ++ L
Sbjct: 179 ASHGDGQDEILGYIEDL 195
>gi|167751930|ref|ZP_02424057.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216]
gi|167660171|gb|EDS04301.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes putredinis
DSM 17216]
Length = 198
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 117/190 (61%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + +FV SS R PKD PEFA +GRSNVGKSSL+N L + LA S PGKT+L
Sbjct: 2 QINKAQFVCSSERLSQLPKDSLPEFAFIGRSNVGKSSLVNMLTGRSGLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N SWY+VDLPGYG+A+ R +++ Y L E + + +L+D+ + PQK
Sbjct: 62 INHFRINDSWYLVDLPGYGYARTSKTQRDEFAKIITDYVLRCERMHFLFVLVDSRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL LGR IP VFTK DK+ A+ R +++ ++Q++ E + PP +SS
Sbjct: 122 IDLRFIEMLGREGIPFGIVFTKTDKLSAAQLAR---SVERYKQVLGEQWEGLPPMFRSSS 178
Query: 198 VTGLGRDELL 207
GR+E+L
Sbjct: 179 EKRTGREEIL 188
>gi|347537382|ref|YP_004844807.1| GTP-binding protein EngB [Flavobacterium branchiophilum FL-15]
gi|345530540|emb|CCB70570.1| Probable GTP-binding protein EngB [Flavobacterium branchiophilum
FL-15]
Length = 204
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 4/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ CP + PE+A +GRSNVGKSSLIN L K LA TS KPGKTQL
Sbjct: 2 KITTAEFIISNSDVSKCPAEFLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGKPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ T+ + F YF R+ LV +LID + Q
Sbjct: 62 INHFKINNNWFLVDLPGYGYARVSKKTKSVFQQFITDYFEKRQQLVCAFVLIDIRLEAQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ-LIRENYPHHPPWIMTS 196
ID++ +++G + IP +FTK DK+ K D NI ++++ +I+ N+ P +TS
Sbjct: 122 IDIEFMSYMGESEIPFCIIFTKADKLSKTK---IDSNIAAYKKAMIKNNWTEMPQHFITS 178
Query: 197 SVTGLGRDELLLHMSQL 213
S+ G++ +L ++ +
Sbjct: 179 SLDATGKETVLNYIEAV 195
>gi|260063723|ref|YP_003196803.1| GTP-binding cell division protein [Robiginitalea biformata
HTCC2501]
gi|88783168|gb|EAR14341.1| putative GTP-binding cell division protein [Robiginitalea biformata
HTCC2501]
Length = 208
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ EFV S+ CP + PE+A +GRSNVGKSSLIN L +K LA S +PGKTQL
Sbjct: 2 KIRSAEFVVSNTDVSRCPAEPLPEYAFIGRSNVGKSSLINMLTDRKHLAKISGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+A+ + + YF R L+ LL+D PQ
Sbjct: 62 INHFRINDNWFLVDLPGYGYARTSKKDKAAFQKLIHRYFRERRQLLSAFLLVDIRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ WL IP +FTK DK+K R + Q + + PP+ +TSS
Sbjct: 122 IDLEFMEWLTGEGIPFALIFTKADKLKPGAVSRQTDGY--LQAMRNAGWEADPPFFVTSS 179
Query: 198 VTGLGRDELLLHMSQL 213
+ G+G+DE+L ++ ++
Sbjct: 180 LKGIGKDEVLAYIGEI 195
>gi|354603382|ref|ZP_09021380.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes
indistinctus YIT 12060]
gi|353348762|gb|EHB93029.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes
indistinctus YIT 12060]
Length = 212
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I F SS + CP D+R EFA +GRSNVGKSSLIN L LA S PGKT+LI
Sbjct: 3 ITSAVFRCSSQKLSQCPADNRWEFAFIGRSNVGKSSLINMLTDSPALAKVSATPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N WY+VDLPGYG+A+ R ++S Y L RE + + +L+D+ + PQKI
Sbjct: 63 NHFLINGCWYLVDLPGYGYARVSKGQRKEFSKLILDYILKREQMYFLFVLVDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD + LG + IP VFTKCDK+ + + NI +++ + E++ PP TSS
Sbjct: 123 DLDFMSLLGEHGIPFGIVFTKCDKL---SANQTESNIARYRRTLLESWEELPPIFRTSSE 179
Query: 199 TGLGRDELL 207
GR+ +L
Sbjct: 180 KRQGREPIL 188
>gi|150026105|ref|YP_001296931.1| ribosome biogenesis GTP-binding protein YsxC [Flavobacterium
psychrophilum JIP02/86]
gi|166225953|sp|A6H1A5.1|ENGB_FLAPJ RecName: Full=Probable GTP-binding protein EngB
gi|149772646|emb|CAL44129.1| Probable GTP-binding protein EngB [Flavobacterium psychrophilum
JIP02/86]
Length = 205
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ CP++ PE+A +GRSNVGKSSLIN L K LA TS +PGKTQL
Sbjct: 2 KINTAEFIISNSIVSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +W++VDLPGYG+AK T+ + F YF RE LV +LID QK
Sbjct: 62 INHFKINNNWFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLIDIRHEAQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL+ +LG +P VFTK D K++KG+ L++ N+ P +TS+
Sbjct: 122 IDLEFITYLGEIELPFCIVFTKAD--KISKGKVAQHVAAYRTALLKNNWEEMPHHFVTSA 179
Query: 198 VTGLGRDELLLHMSQL 213
G++ LL ++ ++
Sbjct: 180 TEHTGKESLLSYIDEV 195
>gi|387789793|ref|YP_006254858.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
gi|379652626|gb|AFD05682.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Solitalea
canadensis DSM 3403]
Length = 213
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 118/189 (62%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFV S+ + P PE+A +GRSNVGKSSLIN L KK LA TS+ PGKTQLI
Sbjct: 3 IKSAEFVCSNTQVSKLPPPSLPEYAFIGRSNVGKSSLINMLTGKKGLAKTSQTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHF +N +W++VDLPGYGFA+ + W F + Y RE+L V++L+D+ + PQKI
Sbjct: 63 NHFQINNNWFLVDLPGYGFARVSKTSAEKWGKFIRQYLSKRENLQCVMVLVDSRLEPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL + LG +P VFTK DK +KG+ +N++ F+ + + + P +TS+
Sbjct: 123 DLQFIDSLGELGLPFVIVFTKSDKQ--SKGKTA-QNVQLFKNELLKTWEEVPQLFVTSAE 179
Query: 199 TGLGRDELL 207
GR+ELL
Sbjct: 180 DKSGREELL 188
>gi|392398264|ref|YP_006434865.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flexibacter
litoralis DSM 6794]
gi|390529342|gb|AFM05072.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Flexibacter
litoralis DSM 6794]
Length = 349
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I +F++S+ K CP PE+A +GRSNVGKSSLINA+ + LA TS PGKTQLI
Sbjct: 3 INTAKFLESNPSFKTCPSPHMPEYAFIGRSNVGKSSLINAMTNRNSLAKTSSTPGKTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
NHFL+N++WY+VDLPGYG+A+ R+D+ Y R++LV +L+D PQ I
Sbjct: 63 NHFLINENWYLVDLPGYGWARVSKSKRLDFEGLITEYLSERKNLVVTFVLVDIRHEPQAI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WL N IP VFTK DK+ +K +++ ++ +++ + PP +TS+V
Sbjct: 123 DLEFFEWLAENEIPFAIVFTKADKLNNSKLV---ASLERYETVLKSRWEALPPNFITSAV 179
Query: 199 TGLGRDELLLHMSQ 212
G +++L ++ +
Sbjct: 180 KNEGTEDILEYIEK 193
>gi|225009952|ref|ZP_03700424.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
gi|225005431|gb|EEG43381.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C]
Length = 160
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 98/149 (65%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + CPKD PE+A +GRSNVGKSSLIN L KK LA TS +PGKTQL
Sbjct: 2 KITSAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N++W++VDLPGYG+A+ + + + YFL R LV +L+D PQ
Sbjct: 62 INHFKINQNWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVA 166
+DLD W+G N IP +FTK DK+K A
Sbjct: 122 VDLDFMRWMGENEIPFCIIFTKADKLKPA 150
>gi|83595990|gb|ABC25349.1| GTP-binding protein [uncultured marine bacterium Ant29B7]
Length = 215
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 4/194 (2%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ F+KSS R ++CP PE+A +GRSNVGKSSLIN LV K LA S +PGKTQLINH
Sbjct: 13 KASFIKSSARNEECPDLHVPEYAFIGRSNVGKSSLINRLVGNKYLAKISGRPGKTQLINH 72
Query: 81 FLV-NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F + + W +VDLPGYG+AK + R ++S Y NR++LV V +L+D PQK+D
Sbjct: 73 FSIEDGQWALVDLPGYGYAKVSKIQRTEFSRMIAYYLRNRKNLVNVFVLVDGRHEPQKLD 132
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
L LG IP + VFTK DK+ + + + S L++E + + PP +TS+ +
Sbjct: 133 LAFVKKLGNWGIPFSIVFTKMDKLSNSDSGKNQALMNS--TLLKE-WDNLPPMFLTSAES 189
Query: 200 GLGRDELLLHMSQL 213
GLGR ELL ++S+L
Sbjct: 190 GLGRSELLAYISKL 203
>gi|375148737|ref|YP_005011178.1| GTP-binding protein engB [Niastella koreensis GR20-10]
gi|361062783|gb|AEW01775.1| GTP-binding protein engB [Niastella koreensis GR20-10]
Length = 217
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 116/202 (57%), Gaps = 16/202 (7%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ ++ SS CPK DRPE+A +GRSNVGKSSLIN L ++LA TS PGKTQLI
Sbjct: 3 IQSATYLISSPDYTKCPKADRPEYAFIGRSNVGKSSLINMLCDNQKLAKTSSAPGKTQLI 62
Query: 79 NHFLVNK-------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
NHF + SWY+VDLPGYGFAK TR W + Y RE+L+ V
Sbjct: 63 NHFDIKSYPQAHVGGSVKPDSWYLVDLPGYGFAKVSQSTRKQWEQMIENYLRKRENLISV 122
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
+LID+ PQK+DLD + LG+ +P FTK DK + +N+K F +R+
Sbjct: 123 FVLIDSRHNPQKLDLDFCDQLGKWEVPFCLAFTKADK---ETQKVVSKNVKDFLDAMRKT 179
Query: 186 YPHHPPWIMTSSVTGLGRDELL 207
+ P +TS+ +GRD++L
Sbjct: 180 WQFLPQSFVTSAEKKMGRDKML 201
>gi|308808330|ref|XP_003081475.1| Predicted GTPase (ISS) [Ostreococcus tauri]
gi|116059938|emb|CAL55997.1| Predicted GTPase (ISS) [Ostreococcus tauri]
Length = 396
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 41 EFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKA 100
E A++GRSNVGKSSL+N + A+ S KPG T +NH+ V+ W +VDLPGYG+A+A
Sbjct: 126 EVALIGRSNVGKSSLLNLVTFGAGAAVVSAKPGTTCSMNHYSVDGRWRLVDLPGYGYAEA 185
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
W +FTK YF RE+L GVLLLIDASVPP D ANWL N P T VFTKC
Sbjct: 186 EPGEIEAWDAFTKEYFATRENLAGVLLLIDASVPPTANDEKYANWLIENETPFTIVFTKC 245
Query: 161 DKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
D+ K KG ++N +F+ + E + P I TSSVT GRDE+L +S L
Sbjct: 246 DRDK-PKGPSVEDNKAAFRAKLEERWHRLPSMISTSSVTTQGRDEVLKFISSL 297
>gi|404404540|ref|ZP_10996124.1| GTP-binding protein YsxC [Alistipes sp. JC136]
Length = 198
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + EF SS R PKDD + A +GRSNVGKSSLIN L + LA S PGKT+L
Sbjct: 2 QITKAEFKCSSERISQVPKDDLKDIAFIGRSNVGKSSLINMLTARGGLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+NHF +N +WY+VDLPGYG+A+ R ++S Y L E + + +L D + PQK
Sbjct: 62 VNHFRINDTWYLVDLPGYGYARTSKAQRGEFSKLITDYILKCEKMHFLFVLADIRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL LG N IP +FTK DK+ + ++ +++ F+ + E + PP ++SS
Sbjct: 122 IDLRFIEMLGENGIPFAIIFTKADKLSKTQQQK---SVERFRAALAEQWEELPPMFVSSS 178
Query: 198 VTGLGRDELLLHMSQ 212
G GR+E+L + +
Sbjct: 179 EKGTGREEILAFIDE 193
>gi|406875419|gb|EKD25211.1| putative GTP-binding protein engB [uncultured bacterium (gcode 4)]
Length = 197
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 123/198 (62%), Gaps = 3/198 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ FVKS+ + ++CP+ + PEFA++GRSNVGKSSLIN + +L+ S PGKT+LI
Sbjct: 3 IRSAVFVKSASKLEECPETNLPEFAMIGRSNVGKSSLINTIANHSKLSKVSVTPGKTKLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
+FL+N WY+VDLPGYG+A+ RM T YF+ RE+L V +LID ++ PQ I
Sbjct: 63 GYFLMNDEWYLVDLPGYGYAQIGQKNRMHRLGITHDYFIGRENLKKVFVLIDGNILPQSI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD + L + NIP V TK DK A + + + F++ + + H P S+V
Sbjct: 123 DLDFIHSLDQKNIPFDIVMTKIDK---ATQKEFSLHTRLFKEELAKIVTHMPKIFPISNV 179
Query: 199 TGLGRDELLLHMSQLRNY 216
T G+++LL ++ +L N+
Sbjct: 180 TKRGKEKLLDYIEELINW 197
>gi|258516483|ref|YP_003192705.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771]
gi|257780188|gb|ACV64082.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771]
Length = 201
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 120/197 (60%), Gaps = 7/197 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPK-DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
++ EFV SS K CP+ + PE GRSNVGKSSLIN LV +K LA TSK PG+TQ
Sbjct: 2 KVTSAEFVISSPGIKLCPEGQEYPEIGFAGRSNVGKSSLINKLVNRKNLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
L+N+FL+N+++YIVD PGYG+AK P R W +GY NR+ L GV+LL+D P
Sbjct: 62 LLNYFLINRAFYIVDFPGYGYAKVPQSVRAGWGKMIEGYLKNRKELSGVVLLLDIRHKPT 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D+ +WL IP V TK DK+ ++ + ++ I++ L RE ++ S
Sbjct: 122 AQDVQMFDWLQHYEIPTLLVATKADKLSRSQQIKQEKVIRT--ALGRE----QEKILLFS 175
Query: 197 SVTGLGRDELLLHMSQL 213
S+TG G+DELL + ++
Sbjct: 176 SLTGQGKDELLSLLEEI 192
>gi|291513697|emb|CBK62907.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes shahii
WAL 8301]
Length = 198
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + EF SS R PKDD + A +GRSNVGKSSLIN L + LA S PGKT+L
Sbjct: 2 QITKAEFKCSSERISQVPKDDLKDIAFIGRSNVGKSSLINMLTARTGLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF +N +WY+VDLPGYG+A+ R ++S Y + E + + +L D + PQK
Sbjct: 62 INHFRINDAWYLVDLPGYGYARTSKTQRSEFSKLITDYVIKCEKMHFLFVLADIRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL LG N IP +FTK DK+ +K +R +++++ F+ + + + PP ++SS
Sbjct: 122 IDLRFIEMLGENGIPFGIIFTKADKL--SKTQR-EKSVERFRTALAQQWEELPPMFVSSS 178
Query: 198 VTGLGRDELL 207
+GR+E+L
Sbjct: 179 EKAVGREEIL 188
>gi|212551105|ref|YP_002309422.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212549343|dbj|BAG84011.1| GTPase EngB [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 209
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK FV + CP+D PE+A +GRSNVGKSSLIN L +K LALTS PGKTQLI
Sbjct: 11 IKNAVFVVGNTDVGKCPRDGFPEYAFIGRSNVGKSSLINMLTGQKGLALTSSIPGKTQLI 70
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNR-ESLVGVLLLIDASVPPQK 137
N+FL+N WY+VDLPGYG+A+ R Y R + L + +LID PQK
Sbjct: 71 NYFLINNEWYLVDLPGYGYAQGGKQKRRTLQRIIDNYLCQRKKELTCIFVLIDCRHNPQK 130
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D + LG N P VFTK DK+ + ENI +Q + +N+ P +TSS
Sbjct: 131 NDTEFIQQLGGNGFPFVIVFTKIDKL---SNKSLKENIDVYQSTLLKNWEELPSIFVTSS 187
Query: 198 VTGLGRDELLLHMSQL 213
+GRDE+L ++ ++
Sbjct: 188 ERKIGRDEILNYIEEI 203
>gi|406882922|gb|EKD30602.1| putative GTP-binding protein engB, partial [uncultured bacterium]
Length = 199
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F SS P PEFA +GRSNVGKSSLINAL ++ +LA TS PGKTQL+NHFL+
Sbjct: 8 FSGSSQNVTGKPAQKLPEFAFIGRSNVGKSSLINALCQQGKLAHTSGTPGKTQLVNHFLI 67
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
N SWY+VDLPGYG+AK R ++ K Y E L + +L+D+ + QKIDL
Sbjct: 68 NDSWYLVDLPGYGYAKISKADREKLAAINKNYINESEELKVLFVLLDSRLEIQKIDLQFL 127
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
LG +P ++TKCDK V + E +++ +++ E + PP ++S+ TG GR
Sbjct: 128 ITLGEAEVPFALIYTKCDKQGVTSLK---ERVENNNKVLFEYWEELPPIFLSSAETGKGR 184
Query: 204 DELLLHMSQL 213
+E+L ++ +
Sbjct: 185 EEVLDYIESI 194
>gi|255037700|ref|YP_003088321.1| HSR1-like GTP-binding protein [Dyadobacter fermentans DSM 18053]
gi|254950456|gb|ACT95156.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053]
Length = 202
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++E +V S+ + CP+ PE+A +GRSNVGKSSLIN L KK LA TS++PGKTQ+
Sbjct: 2 KVQEARYVMSNSDYQKCPEPVLPEYAFIGRSNVGKSSLINMLTSKKALAKTSQQPGKTQM 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHF+++ +WY+VDLPGYG+AK V R W Y RE+L+ +L+D
Sbjct: 62 INHFIIDDAWYLVDLPGYGYAKVSKVEREKWEKMIHDYLHYRENLICTFVLVDVRHSAMA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL+ LG IP +FTK DK+K A + ++++++ + E + P +TS+
Sbjct: 122 VDLNFMAALGEAGIPFEIIFTKADKLKPA---QVASQVEAYKRKMAELWEEVPEMYVTSA 178
Query: 198 VTGLGRDELL 207
GR+ +L
Sbjct: 179 EKNEGREPIL 188
>gi|334364138|ref|ZP_08513135.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5]
gi|313159636|gb|EFR58994.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5]
Length = 197
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + EF SS R PKD + A +GRSNVGKSSLIN L ++ LA S PGKT+L
Sbjct: 2 QINKAEFKCSSERISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL++ +WY+VDLPGYG+A+ R ++S Y L E + + +L D + PQK
Sbjct: 62 INHFLIDNAWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLADLRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL LG N IP +FTK DK+ +K +R +++++ ++ + E + P ++SS
Sbjct: 122 IDLQFIEMLGMNGIPFAVIFTKADKL--SKTQR-EKSVERYRAALAEQWEELPRMFVSSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
G GR+E+L + + N
Sbjct: 179 QHGTGREEILGFIGECLN 196
>gi|390948002|ref|YP_006411762.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes
finegoldii DSM 17242]
gi|390424571|gb|AFL79077.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes
finegoldii DSM 17242]
Length = 197
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + EF SS R PKD + A +GRSNVGKSSLIN L ++ LA S PGKT+L
Sbjct: 2 QINKAEFKCSSERISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL++ +WY+VDLPGYG+A+ R ++S Y L E + + +L D + PQK
Sbjct: 62 INHFLIDNAWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLADIRLEPQK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL LG N IP +FTK DK+ +K +R +++++ ++ + E + P ++SS
Sbjct: 122 IDLQFIEMLGMNGIPFAVIFTKADKL--SKTQR-EKSVERYRAALAEQWEELPRMFVSSS 178
Query: 198 VTGLGRDELLLHMSQLRN 215
G GR+E+L + + N
Sbjct: 179 QHGTGREEILGFIGECLN 196
>gi|222100001|ref|YP_002534569.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
neapolitana DSM 4359]
gi|254783217|sp|B9K8C0.1|ENGB_THENN RecName: Full=Probable GTP-binding protein EngB
gi|221572392|gb|ACM23204.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359]
Length = 195
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 121/196 (61%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+V+ VK + D P + E A +GRSNVGKSSL+NAL +K +A SK PGKT+ I
Sbjct: 3 IKDVKLVKVAKTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAYVSKTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYG+AK R+ W + YF NR SL V LL+D +PPQ+
Sbjct: 62 NFYLVNSRYYFVDLPGYGYAKVSKKERVQWKKLVEDYFTNRWSLQMVFLLVDGRIPPQET 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL WL N+P T V TK DK+K++ + ++ DE+ K+F + Y + I TSS
Sbjct: 122 DLMMVEWLKSLNVPFTIVLTKMDKVKMSERKKKLDEHKKAFSK-----YGEY-TIIPTSS 175
Query: 198 VTGLGRDELLLHMSQL 213
VTG G D+LL +S L
Sbjct: 176 VTGEGIDDLLNLISTL 191
>gi|223557993|gb|ACM90999.1| GTP-binding cell division protein [uncultured bacterium URE4]
Length = 198
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ F SS + + P PEFA +GRSNVGKSSLINAL +LA TS+ PGKTQL
Sbjct: 2 KIRTAIFSGSSTKVEQKPARKLPEFAFIGRSNVGKSSLINALTGNSKLAKTSQTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+NHFL+N +WY+VDLPGYG+A+ PD R Y E LV + +L+D+ Q+
Sbjct: 62 VNHFLINDNWYLVDLPGYGYARLPDKERAKLRHIIWDYVNRSEELVMLFVLLDSRHDMQE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL + LG IP +FTK DK E K+ + E + PP ++SS
Sbjct: 122 VDLRFISELGEKGIPFGLIFTKADKQGATVTAAQVEKNKA---RLLEEWEELPPVFISSS 178
Query: 198 VTGLGRDELL 207
V+GLGR+E+L
Sbjct: 179 VSGLGREEIL 188
>gi|281412764|ref|YP_003346843.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
gi|281373867|gb|ADA67429.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga
naphthophila RKU-10]
Length = 195
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++VE VK + D P + E A +GRSNVGKSSL+NAL KK +A SK PGKT+ I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYG+AK RM W + YF NR SL V LL+D +PPQ
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL W+ NIP T V TK DK+K++ + ++ +E+ K F + Y + I TSS
Sbjct: 122 DLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSR-----YGEY-TIIPTSS 175
Query: 198 VTGLGRDELLLHMSQL 213
VTG G ELL +S L
Sbjct: 176 VTGEGISELLDLISTL 191
>gi|15644215|ref|NP_229266.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|418045523|ref|ZP_12683618.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
gi|13124246|sp|Q9X1H7.1|ENGB_THEMA RecName: Full=Probable GTP-binding protein EngB
gi|335892384|pdb|3PQC|A Chain A, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892385|pdb|3PQC|B Chain B, Crystal Structure Of Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb (YsxcYIHA) IN
COMPLEX WITH GDP
gi|335892386|pdb|3PR1|A Chain A, Crystal Structure Of Apo Thermotoga Maritima Ribosome
Biogenesis Gtp- Binding Protein Engb
gi|4982031|gb|AAD36534.1|AE001797_14 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351676408|gb|EHA59561.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima
MSB8]
Length = 195
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++VE VK + D P + E A +GRSNVGKSSL+NAL +K +A SK PGKT+ I
Sbjct: 3 IRDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAFVSKTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYG+AK RM W + YF NR SL V LL+D +PPQ
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL W+ NIP T V TK DK+K++ + ++ +E+ K F + Y + I TSS
Sbjct: 122 DLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSK-----YGEY-TIIPTSS 175
Query: 198 VTGLGRDELLLHMSQL 213
VTG G ELL +S L
Sbjct: 176 VTGEGISELLDLISTL 191
>gi|148270457|ref|YP_001244917.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga petrophila
RKU-1]
gi|166232160|sp|A5IMB8.1|ENGB_THEP1 RecName: Full=Probable GTP-binding protein EngB
gi|147736001|gb|ABQ47341.1| small GTP-binding protein [Thermotoga petrophila RKU-1]
Length = 195
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++VE VK + D P + E A +GRSNVGKSSL+NAL KK +A SK PGKT+ I
Sbjct: 3 IQDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYG+AK RM W + YF NR SL V LL+D +PPQ
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D W+ NIP T V TK DK+K++ + ++ +E+ K F + Y + I TSS
Sbjct: 122 DFMMIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSR-----YGEY-TIIPTSS 175
Query: 198 VTGLGRDELLLHMSQL 213
VTG G ELL +S L
Sbjct: 176 VTGEGISELLDLISTL 191
>gi|357040205|ref|ZP_09101994.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
gi|355356869|gb|EHG04650.1| GTP-binding protein engB [Desulfotomaculum gibsoniae DSM 7213]
Length = 202
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 111/194 (57%), Gaps = 13/194 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I +FV S+ CP PE A+ GRSNVGKSSL N LV +K LA TS PG+TQL
Sbjct: 2 KITSADFVTSATNLDKCPAGSHPEVALAGRSNVGKSSLFNVLVNRKRLARTSNTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F++N ++VDLPGYGFAK P + W +GY RE L GV+LL+D P +
Sbjct: 62 INFFIINDKLHLVDLPGYGFAKVPVRVKAQWGKMIEGYLAGREQLRGVILLVDVRHKPTQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL--IREN--YPHHPPWI 193
D NWL IP V TK DK+ ++GR + Q L +R+N P +
Sbjct: 122 DDQQMYNWLKAYRIPTAVVATKADKL--SRGR-------AIQNLAVVRKNLQLADADPLV 172
Query: 194 MTSSVTGLGRDELL 207
+ S+VTG G++++L
Sbjct: 173 LFSAVTGQGKEDIL 186
>gi|334136423|ref|ZP_08509889.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
gi|333606033|gb|EGL17381.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF7]
Length = 213
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KVNQAEFIISAVGPGQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VDLPGYG+AK R +W F + Y L RE L V+ L+D PP K
Sbjct: 62 LNYYRINDDLYFVDLPGYGYAKVSKTKRAEWGKFIENYLLKREPLKAVMQLVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D WL ++P+ V TK DK+ K ++ + IK + R P+I+ SS
Sbjct: 122 DDQAMYTWLKHMDVPVIVVATKADKVPKGKWQKHAKIIKDDLEFDRSG-----PFIIFSS 176
Query: 198 VTGLGRDEL 206
TG+G+DEL
Sbjct: 177 ETGMGKDEL 185
>gi|170289148|ref|YP_001739386.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga sp. RQ2]
gi|403253600|ref|ZP_10919901.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
gi|238688853|sp|B1LBK5.1|ENGB_THESQ RecName: Full=Probable GTP-binding protein EngB
gi|170176651|gb|ACB09703.1| small GTP-binding protein [Thermotoga sp. RQ2]
gi|402811134|gb|EJX25622.1| GTP-binding protein YsxC [Thermotoga sp. EMP]
Length = 195
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 117/196 (59%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++VE VK + D P + E A +GRSNVGKSSL+NAL +K +A SK PGKT+ I
Sbjct: 3 IRDVELVKIARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-VAFVSKTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYG+AK RM W + YF NR SL V LL+D +PPQ
Sbjct: 62 NFYLVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D W+ NIP T V TK DK+K++ + ++ +E+ K F + Y + I TSS
Sbjct: 122 DFMMIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSR-----YGEY-TIIPTSS 175
Query: 198 VTGLGRDELLLHMSQL 213
VTG G ELL +S L
Sbjct: 176 VTGEGISELLDLISTL 191
>gi|435854697|ref|YP_007316016.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Halobacteroides
halobius DSM 5150]
gi|433671108|gb|AGB41923.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Halobacteroides
halobius DSM 5150]
Length = 194
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + ++ P + PE A+ GRSNVGKSSLIN ++ +++LA TS KPGKTQ
Sbjct: 2 KINNPEFVCSTHKREEYPFHNLPEVALAGRSNVGKSSLINKVINRRKLAFTSSKPGKTQS 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + ++ +Y VDLPGYGFAK PD + +W + Y NR L GV+L+ID+ P
Sbjct: 62 INFYKMDNYFYFVDLPGYGFAKVPDKVKEEWGVMIENYLFNRSHLEGVILVIDSRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
DL +WL N+P V TK DK+K ++ R+ ++LI+E P P+
Sbjct: 122 DDLMMYDWLLEMNMPTLIVATKVDKLKRSQRRQQ-------EKLIKERLHLTPFVPFTFF 174
Query: 196 SSVTGLGRDELLLHMSQL 213
S+ TG G+ E+ ++Q
Sbjct: 175 SAKTGEGKKEVFKFINQF 192
>gi|333922906|ref|YP_004496486.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333748467|gb|AEF93574.1| GTP-binding protein engB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 197
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ P +D PE A +GRSNVGKSSLIN LV ++ LA TS PG+TQL
Sbjct: 2 KIVTAEFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN + +VDLPGYGFAK P+ R W +GY NRESL GV L+D P
Sbjct: 62 INFFKVNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D WL +P V TK DK+ + + IK L E+ I S+
Sbjct: 122 QDRQMYEWLLHYQVPTVVVATKVDKLSNNQWAKQQAVIKKTLSLAPEHL-----LIAFSA 176
Query: 198 VTGLGRDELLLHMSQLRNYW 217
TG GRDELL Q+ ++W
Sbjct: 177 ETGRGRDELL----QVISHW 192
>gi|323703639|ref|ZP_08115282.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
gi|323531411|gb|EGB21307.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
nigrificans DSM 574]
Length = 197
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ P +D PE A +GRSNVGKSSLIN LV ++ LA TS PG+TQL
Sbjct: 2 KIVTAEFVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN + +VDLPGYGFAK P+ R W +GY NRESL GV L+D P
Sbjct: 62 INFFKVNNRFLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D WL +P V TK DK+ + + IK L E+ I S+
Sbjct: 122 QDRQMYEWLLHYQVPTVVVATKVDKLSNNQWAKQQAVIKKTLSLAPEHL-----LIAFSA 176
Query: 198 VTGLGRDELLLHMSQLRNYW 217
TG GRDELL Q+ ++W
Sbjct: 177 ETGRGRDELL----QVISHW 192
>gi|225175196|ref|ZP_03729192.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
gi|225169372|gb|EEG78170.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1]
Length = 197
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ A+ P D PE A +GRSNVGKS+L+N+LV +K+LALTS PGKT+L
Sbjct: 2 KIKSAEFIISAAGAEQFPTDMLPEVAFVGRSNVGKSTLLNSLVNRKKLALTSGNPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N+++Y DLPGYGFA+ + W + Y RE+L V L+D PP
Sbjct: 62 INFFLINEAFYFADLPGYGFARVSHEMKKQWGLLIENYLQTRETLQVVAQLVDLRHPPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL WL NIP V TK D K+++G R +++K ++ + P IM S+
Sbjct: 122 DDLAMYQWLIHFNIPTIIVATKAD--KISRGNR-QKHVKQVREGL--GLGSQGPVIMFSA 176
Query: 198 VTGLGRDEL 206
TG G+D++
Sbjct: 177 KTGEGKDDI 185
>gi|147677143|ref|YP_001211358.1| ribosome biogenesis GTP-binding protein YsxC [Pelotomaculum
thermopropionicum SI]
gi|189037182|sp|A5D451.1|ENGB_PELTS RecName: Full=Probable GTP-binding protein EngB
gi|146273240|dbj|BAF58989.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 198
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 113/190 (59%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ + D P + PE A+ GRSNVGKSSL+N LV +K LA S PG+T+L
Sbjct: 2 KIKNAEFITSAAKTADYPAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FLVN + +VDLPGYG+AK R W + Y RE+L GV+LL+D+ PP
Sbjct: 62 INFFLVNGLFRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHPPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D+ WL IP TK D K+++ +R +++K ++++ N P + S+
Sbjct: 122 LDVQMYEWLKYQGIPAAVAATKAD--KISRSKRA-QSLKVIREVL--NLTAKEPLVFFSA 176
Query: 198 VTGLGRDELL 207
T GR+E+L
Sbjct: 177 ETSEGREEML 186
>gi|294783777|ref|ZP_06749101.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
1_1_41FAA]
gi|294480655|gb|EFG28432.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
1_1_41FAA]
Length = 194
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ +E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFEKEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILTFMEEKLN 193
>gi|333977881|ref|YP_004515826.1| GTP-binding protein engB [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821362|gb|AEG14025.1| GTP-binding protein engB [Desulfotomaculum kuznetsovii DSM 6115]
Length = 194
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFVKS + CP RPE A+ GRSNVGKSSL+N LV ++ LA TS PG+T+ +
Sbjct: 3 IVSAEFVKSVVDLQRCPAGGRPEVALAGRSNVGKSSLLNCLVNRRNLARTSNTPGRTRTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VDLPGYG+A+ P+ R W +GY R L GV+ ++D PP
Sbjct: 63 NFYLINNRFYLVDLPGYGYARVPEKMRASWGPLIEGYLSRRPELRGVIQIVDLRHPPTAQ 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL +++P V TK DK+ ++G R ++ L ++ P I S+
Sbjct: 123 DVQLYQWLKHHHLPAVVVATKADKLSKSQGLRQLLVVRQTLGLTGDD-----PLIKFSAR 177
Query: 199 TGLGRDEL 206
T GRDEL
Sbjct: 178 TREGRDEL 185
>gi|224158020|ref|XP_002337923.1| predicted protein [Populus trichocarpa]
gi|222870018|gb|EEF07149.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 82/97 (84%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNIV+ YA ++Q+ + EF+KSS R +DCP D PEFA++GRSNVGKSSL+N+LVR
Sbjct: 91 ILKGSNIVLSKYARNAQVVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVR 150
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA 98
+K+LALTSKKPGKTQ INHF VN SWY+VDLPGYG+
Sbjct: 151 RKKLALTSKKPGKTQCINHFKVNDSWYLVDLPGYGYG 187
>gi|334339590|ref|YP_004544570.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
gi|334090944|gb|AEG59284.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
ruminis DSM 2154]
Length = 201
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ EF+ S+ P D PE A +GRSNVGKSSLIN ++ +K LA TSK PG+TQL
Sbjct: 2 KIQSSEFITSAVNPGGYPPGDLPEVAFVGRSNVGKSSLINKMLNRKGLARTSKTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN+++ +VDLPGYG+AK P+ R+ W +GY NR +L GV LL+D P
Sbjct: 62 INFFRVNENFMMVDLPGYGYAKVPEEVRVRWGKMVEGYLKNRANLQGVFLLLDCRHVPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-- 195
D WL +P V TK DK+ + Q +I+ P P +
Sbjct: 122 QDKQMYQWLAHYGVPAVVVATKIDKLS-------NNQWAKQQGVIKRTLPLSPEHRLVPF 174
Query: 196 SSVTGLGRDELLLHMSQ 212
S+ TG GR+ELL ++Q
Sbjct: 175 SAETGRGREELLEVIAQ 191
>gi|262066526|ref|ZP_06026138.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
periodonticum ATCC 33693]
gi|291379760|gb|EFE87278.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
periodonticum ATCC 33693]
Length = 194
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +F+KS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFIKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ +E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLIFEKEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILTFMEEKLN 193
>gi|223939366|ref|ZP_03631245.1| GTP-binding protein HSR1-related [bacterium Ellin514]
gi|223891970|gb|EEF58452.1| GTP-binding protein HSR1-related [bacterium Ellin514]
Length = 196
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I F S+ + CP++ PEFA +GRSNVGKSSL+N L +K+LA SK PG T+LI
Sbjct: 3 INSAVFEVSAPNLETCPEETLPEFAFIGRSNVGKSSLVNLLAGRKDLARVSKVPGYTKLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +NK+W +VDLPGYG+A ++ Y R +L V +LID+ PQKI
Sbjct: 63 NFFTINKAWRLVDLPGYGYAHIARENSARFNDAVSNYLAKRSNLYCVFVLIDSRHKPQKI 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ WLG + P +FTK DK+K A+ + N+ F++ I + + P + SSV
Sbjct: 123 DLEFVQWLGEQSAPCALIFTKTDKVKAAQLQ---TNMDLFKESISGWFENVPEILSCSSV 179
Query: 199 TGLGRDELL 207
T G E+L
Sbjct: 180 TKNGVREIL 188
>gi|410659262|ref|YP_006911633.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
gi|409021617|gb|AFV03648.1| GTP-binding protein EngB [Dehalobacter sp. DCA]
Length = 203
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 113/197 (57%), Gaps = 11/197 (5%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ EF+ S+ + + P+ RPE A+ GRSNVGKSSLIN LV +K LA K PGKTQ IN
Sbjct: 4 RKAEFMISAVKPQQYPEGTRPELAVSGRSNVGKSSLINKLVNRKGLAKVGKTPGKTQTIN 63
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F +N WY+VDLPGYG+AK TRM W + YF RE+L GV+ L+D P + D
Sbjct: 64 FFNINDEWYLVDLPGYGYAKVSQETRMQWGKMMQTYFRLRENLKGVIQLVDIRHQPTEED 123
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW---IMTS 196
L NNIP+ V TK D K+A+G+RP + ++I E++ W I S
Sbjct: 124 RMMLEMLKVNNIPVLVVATKAD--KIARGQRP-----KYLKIIAESF-KMSDWKTIIPFS 175
Query: 197 SVTGLGRDELLLHMSQL 213
S G G EL M +
Sbjct: 176 SEDGTGLQELNQAMDDI 192
>gi|225166344|ref|ZP_03728026.1| GTPase EngB [Diplosphaera colitermitum TAV2]
gi|224799414|gb|EEG17961.1| GTPase EngB [Diplosphaera colitermitum TAV2]
Length = 213
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK F KS+ P EFA +GRSNVGKSSL+N L +K+LA S PGKT++
Sbjct: 18 KIKTAVFEKSAPNLATSPVWGCREFAFIGRSNVGKSSLLNLLTEQKDLAKVSATPGKTRM 77
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N +W +VDLPGYGFAK R D++ Y R++L V +LID+ +PPQ+
Sbjct: 78 INFFKINNAWSLVDLPGYGFAKVAQHKRSDFNQAVARYLEKRDNLACVFVLIDSRLPPQQ 137
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD WL P +FTK DK + R I F + + E PP + +SS
Sbjct: 138 IDLDFIQWLEGTGRPFALIFTKTDKQSPTQTR---AKISLFTEALAEWRTEPPPILTSSS 194
Query: 198 VTGLGRDELL 207
T GR E+L
Sbjct: 195 KTKSGRREIL 204
>gi|419842352|ref|ZP_14365702.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386902261|gb|EIJ67103.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 204
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 120/196 (61%), Gaps = 10/196 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK +++KS+ KD P+ + EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN FL+N+ +YIVDLPGYGFAK P + +W S + Y ++ R LV VLL D P
Sbjct: 62 LINFFLINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISARTKLVFVLL--DIRRIP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+ D++ WL +N+P +FTK DK+ +E + +++ ++ H+
Sbjct: 120 SEEDMEMLRWLDFHNLPFKIIFTKTDKIS------NNEKFRLLKEIRKKIEFHNEDVFFY 173
Query: 196 SSVTGLGRDELLLHMS 211
SS++ GR+E+L M
Sbjct: 174 SSLSHKGREEVLQFME 189
>gi|34762743|ref|ZP_00143732.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887593|gb|EAA24673.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 194
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N++ +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|262039420|ref|ZP_06012727.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
gi|261746556|gb|EEY34088.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
goodfellowii F0264]
Length = 198
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 8/201 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFVKS+ KD P+ EF+ +GRSNVGKSSLIN+L ++ LA TSK PG+TQL
Sbjct: 2 EIKKSEFVKSAVYEKDYPEKKGIEFSFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+FL++ Y VDLPGYGFAK P+ + +W + + Y + V V LL+D P
Sbjct: 62 INYFLIDSEIYFVDLPGYGFAKVPEAVKRNWGTTIETYLKSERDKV-VFLLLDLRRIPSG 120
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ WL NI +FTK DK+ +E K +++ ++ ++ +S+
Sbjct: 121 EDMEMLRWLEHYNIEYYIIFTKSDKLS------NNEKAKQLKEIKKKLEFNNEDVFFSSA 174
Query: 198 VTGLGRDELL-LHMSQLRNYW 217
+ G++ELL +++NY+
Sbjct: 175 LKNTGKEELLDFIYEKVKNYY 195
>gi|256846927|ref|ZP_05552381.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_36A2]
gi|294784268|ref|ZP_06749563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_27]
gi|256717725|gb|EEU31284.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_36A2]
gi|294488134|gb|EFG35485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_27]
Length = 194
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N++ +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|225850861|ref|YP_002731095.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
gi|225646661|gb|ACO04847.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina
EX-H1]
Length = 203
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 10/196 (5%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S IK+V+F+KS+ KD P+ PE A++GRSNVGKSSLINA+ K+ +A S PGKT+
Sbjct: 2 SVIKKVQFIKSAVNPKDYPQPKYPEVAVVGRSNVGKSSLINAIF-KRNIAKVSSSPGKTR 60
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN FL+N VDLPGYG+A R W + YF RE+L V++L+D+ PP
Sbjct: 61 LINFFLLNDRISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVDSRHPPT 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIM 194
K+D+ WL IP V TK DK+ ++ R +++IRE P P +
Sbjct: 121 KLDIMMKEWLEDLGIPYIVVATKADKLNQSEKART-------KKVIRETLGLPKDFPVFL 173
Query: 195 TSSVTGLGRDELLLHM 210
TS+ G G EL+ ++
Sbjct: 174 TSAKEGTGIKELMSYV 189
>gi|395242947|ref|ZP_10419935.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
gi|394484767|emb|CCI80943.1| Probable GTP-binding protein EngB [Lactobacillus hominis CRBIP
24.179]
Length = 194
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EFV S+ K PKDD PEFA+ GRSNVGKSSLIN + +++LA TS++PGKTQ
Sbjct: 2 KVNSSEFVISAVSNKQYPKDDLPEFALAGRSNVGKSSLINTITNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N + Y+VD+PGYG+AK R + + Y R L G++LL+DA P K
Sbjct: 62 LNFYKINDALYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRADLKGLILLVDARHDPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N++ ++P+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYMTYLDLPILVVATKMDKLKKMQASQIKQKISKNIDLNKENVTFLP----FSS 177
Query: 198 VTGLGRDEL 206
VT L DEL
Sbjct: 178 VTKLNVDEL 186
>gi|254443449|ref|ZP_05056925.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
gi|198257757|gb|EDY82065.1| GTPase, putative [Verrucomicrobiae bacterium DG1235]
Length = 216
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 112/193 (58%), Gaps = 3/193 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ EF+ S+ +DCP+ PE A +GRSNVGKSSL+N L ++K LA SKKPG T+L
Sbjct: 2 KIESAEFLTSAKDLEDCPRSSLPEVAFIGRSNVGKSSLVNMLTKQKSLAKVSKKPGATKL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F +NK W +VDLPGYGFA+ ++D++ GY + R L + L+DA P +
Sbjct: 62 LNFFTMNKWWNLVDLPGYGFAQVSKGKQVDFNEAVSGYLMGRTQLKLICALVDARNEPME 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL NWL +P VFTK D+ + RR N+ +Q+ + P I SS
Sbjct: 122 LDLGFLNWLEDCPVPHVIVFTKTDEEQEDIWRR---NMDIYQETLEALELRVPEMIPCSS 178
Query: 198 VTGLGRDELLLHM 210
V GR LL ++
Sbjct: 179 VDRAGRGVLLQYI 191
>gi|379723753|ref|YP_005315884.1| protein EngB [Paenibacillus mucilaginosus 3016]
gi|378572425|gb|AFC32735.1| EngB [Paenibacillus mucilaginosus 3016]
Length = 225
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P D PE A+ GRSNVGKSSLIN ++++K LA TS KPGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N+ + VDLPGYG+A+ R W F + Y RE L VL +ID PP K
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY--PHHPPWIMT 195
D WL N +PL V TK DK+ P + +++RE P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKI-------PRGKWQQHLKIVRETLGADKDDPMILF 174
Query: 196 SSVTGLGRDEL 206
SS G+G+DEL
Sbjct: 175 SSELGIGKDEL 185
>gi|19705309|ref|NP_602804.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|254302269|ref|ZP_04969627.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|24418375|sp|Q8RHK1.1|ENGB_FUSNN RecName: Full=Probable GTP-binding protein EngB
gi|19713278|gb|AAL94103.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|148322461|gb|EDK87711.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 194
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|261405364|ref|YP_003241605.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
Y412MC10]
gi|261281827|gb|ACX63798.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
Y412MC10]
Length = 214
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 11/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN Y+VD PGYG+AK R + + Y L+RE L VLL++D PP K
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDMRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY---PHHPPWIM 194
D+ WL N P+ V TK D K+ K RR + ++++E P+H ++M
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKAD--KIPKTRR-----QKHVKIVKETLGFKPYH-SFVM 173
Query: 195 TSSVTGLGRDEL 206
SS GLG+DEL
Sbjct: 174 FSSELGLGKDEL 185
>gi|421501626|ref|ZP_15948585.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|402265778|gb|EJU15238.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 204
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 10/196 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK +++KS+ KD P+ + EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN F++N+ +YIVDLPGYGFAK P + +W S + Y ++ R LV VLL D P
Sbjct: 62 LINFFIINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISARTKLVFVLL--DIRRIP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+ D++ WL +N+P +FTK DK+ +E + +++ ++ H+
Sbjct: 120 SEEDMEMLRWLDFHNLPFKIIFTKTDKIS------NNEKFRLLKEIRKKIEFHNEDVFFY 173
Query: 196 SSVTGLGRDELLLHMS 211
SS++ GR+E+L M
Sbjct: 174 SSLSHKGREEVLQFME 189
>gi|337750705|ref|YP_004644867.1| protein EngB [Paenibacillus mucilaginosus KNP414]
gi|336301894|gb|AEI44997.1| EngB [Paenibacillus mucilaginosus KNP414]
Length = 225
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P D PE A+ GRSNVGKSSLIN ++++K LA TS KPGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N+ + VDLPGYG+A+ R W F + Y RE L VL +ID PP K
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY--PHHPPWIMT 195
D WL N +PL V TK DK+ P + +++RE P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKI-------PRGKWQQHLKIVRETLGADKDDPMILF 174
Query: 196 SSVTGLGRDEL 206
SS G+G+DEL
Sbjct: 175 SSELGIGKDEL 185
>gi|329924530|ref|ZP_08279592.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF5]
gi|328940609|gb|EGG36929.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
HGF5]
Length = 214
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 11/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN Y+VD PGYG+AK R + + Y L+RE L VLL++D PP K
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDMRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY---PHHPPWIM 194
D+ WL N P+ V TK D K+ K RR + ++++E P+H ++M
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKAD--KIPKTRR-----QKHVKIVKETLGFKPYH-SFVM 173
Query: 195 TSSVTGLGRDEL 206
SS GLG+DEL
Sbjct: 174 FSSELGLGKDEL 185
>gi|296328557|ref|ZP_06871076.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154366|gb|EFG95165.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 194
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ +LI +N
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKT--RLIFDN----EDVFFH 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|296134050|ref|YP_003641297.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
gi|296032628|gb|ADG83396.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens
JR]
Length = 205
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EF+ S+ K P + PE A GRSNVGKSSLIN L +K LA TS +PGKTQL+
Sbjct: 3 ITAAEFIISAPGPKQYPVEGYPEIAFAGRSNVGKSSLINTLTNRKGLAKTSSRPGKTQLL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+NKS Y VDLPGYGFA+ T+ W + Y NRE LV V+ LID P +
Sbjct: 63 NFYLINKSLYFVDLPGYGFARVSKETKSYWGKMIENYLKNREELVAVVQLIDIRHAPSRD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D+ WL IP V K DK+ K + ++IR++ P P ++ S
Sbjct: 123 DITMHQWLKHYRIPTVLVLNKADKITRGKWAQ-------HAKIIRQSLMPAPETPVVVFS 175
Query: 197 SVTGLGRDELL 207
+ T GR+ELL
Sbjct: 176 AETRQGREELL 186
>gi|386726505|ref|YP_006192831.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
gi|384093630|gb|AFH65066.1| GTP-binding protein YsxC [Paenibacillus mucilaginosus K02]
Length = 225
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P D PE A+ GRSNVGKSSLIN ++++K LA TS KPGKTQ
Sbjct: 2 KVNQAEFVISAVGPSQYPADALPEIALAGRSNVGKSSLINRMIQRKNLARTSSKPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N+ + VDLPGYG+A+ R W F + Y RE L VL +ID PP K
Sbjct: 62 LNYYRINQDLFFVDLPGYGYAQVSKTEREKWGKFIEQYLTEREPLKLVLQVIDVRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY--PHHPPWIMT 195
D WL N +PL V TK DK+ P + +++RE P I+
Sbjct: 122 DDQAMYAWLKHNGVPLCIVVTKADKI-------PRGKWQQHLKIVRETLGADKDDPMILF 174
Query: 196 SSVTGLGRDEL 206
SS G+G+DEL
Sbjct: 175 SSELGIGKDEL 185
>gi|421527263|ref|ZP_15973867.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum ChDC F128]
gi|402256697|gb|EJU07175.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum ChDC F128]
Length = 194
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAIYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|373114185|ref|ZP_09528402.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371653072|gb|EHO18478.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 204
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 120/196 (61%), Gaps = 10/196 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK +++KS+ KD P+ + EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN F++N+ +YIVDLPGYGFAK P + +W S + Y ++ R LV VLL D P
Sbjct: 62 LINFFIINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISTRTKLVFVLL--DIRRIP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+ D++ WL +N+P +FTK DK+ +E + +++ ++ H+
Sbjct: 120 SEEDMEMLRWLDFHNLPFKIIFTKTDKIS------NNEKFRLLKEIRKKIEFHNEDVFFY 173
Query: 196 SSVTGLGRDELLLHMS 211
SS++ GR+E+L M
Sbjct: 174 SSLSHKGREEVLQFME 189
>gi|95931072|ref|ZP_01313799.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
gi|95132881|gb|EAT14553.1| GTP-binding [Desulfuromonas acetoxidans DSM 684]
Length = 202
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QIK +FVKS+ R + P +RPE A GRSNVGKSSL+N +V++K L TS PG+TQL
Sbjct: 2 QIKTAQFVKSATRPGNYPPAERPEIAFAGRSNVGKSSLLNVMVQRKSLVRTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N+ Y+VDLPGYGFAK P + W + Y +R+SL V++L D P++
Sbjct: 62 INFFDLNEEIYLVDLPGYGFAKVPMAVKKQWGPMIQTYLQSRQSLCAVVVLFDIRRVPRE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDE--NIKSFQQLIRENYPHHPPWIMT 195
DL +WL +P V TK D KV++ RR + I L E + +
Sbjct: 122 EDLQLLDWLEEYEVPTIPVITKVD--KVSRNRRAAQIAPIAEATGLPAEAFS------LF 173
Query: 196 SSVTGLGRDEL 206
S++T GRDE+
Sbjct: 174 SALTKEGRDEI 184
>gi|414880638|tpg|DAA57769.1| TPA: hypothetical protein ZEAMMB73_007341 [Zea mays]
Length = 187
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
Query: 2 ILPGSNIVVGPYA-GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
+L GSNIV+GPYA G +Q+ +FVKSS R DCP+D PEFA++GRSNVGKSSL+N+LV
Sbjct: 92 VLKGSNIVLGPYARGDAQVVNADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLV 151
Query: 61 RKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYG 96
R+K LALTSKKPGKTQ INHF VN SWY+VDLPGYG
Sbjct: 152 RRKRLALTSKKPGKTQCINHFKVNDSWYLVDLPGYG 187
>gi|56421184|ref|YP_148502.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus
kaustophilus HTA426]
gi|81819655|sp|Q5KWK2.1|ENGB_GEOKA RecName: Full=Probable GTP-binding protein EngB
gi|56381026|dbj|BAD76934.1| GTP-binding protein [Geobacillus kaustophilus HTA426]
Length = 195
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ E V S+ + + P RPE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N S+Y VD+PGYGFA+ R W + + YF RE+L +LL+D PP K
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREALKAAVLLVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP+ + TK D KV +G+ ++ K ++ +R P I+ S+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKAD--KVPRGKH-QKHAKIARETLR--MADGDPLILFSAE 177
Query: 199 TGLGRDE 205
TG G+DE
Sbjct: 178 TGQGKDE 184
>gi|297616506|ref|YP_003701665.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus
lipocalidus DSM 12680]
gi|297144343|gb|ADI01100.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus
lipocalidus DSM 12680]
Length = 198
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K+ EF S + P PE A+ GRSNVGKSSLIN L ++ LALTS PGKT+
Sbjct: 5 RVKKAEFKGSYVDIESLPASGLPEIALAGRSNVGKSSLINCLANRRNLALTSSTPGKTRT 64
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN++L + +W++VDLPGYG+AK R WS + Y R L GV+ ++D P +
Sbjct: 65 INYYLFDDAWFLVDLPGYGYAKVSQAERKRWSLLIEKYLKERRQLKGVVQVVDIRHHPTE 124
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D + WLG + IP T V TK D K+A+G+ + + RE PP + SS
Sbjct: 125 TDKLMSEWLGYHQIPRTVVATKAD--KIARGKWKTQ----LAAIQRELRLSDPP-LCFSS 177
Query: 198 VTGLGRDELLLHMSQL 213
+TG GRDEL+ + ++
Sbjct: 178 LTGEGRDELVRAIGEM 193
>gi|414153437|ref|ZP_11409763.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455116|emb|CCO07666.1| putative GTP-binding protein EngB [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 204
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ P D PE A +GRSNVGKSSLIN LV +K LA TS PG+TQL
Sbjct: 2 KIVAAEFLTSAVNPGGYPPGDLPEIAFVGRSNVGKSSLINRLVNRKGLARTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N + +VDLPGYG+A+ P+ + W +GY NRE+L GV LL+D P
Sbjct: 62 INFFKINDRFIMVDLPGYGYARVPEEVKARWGKMIEGYLKNRENLRGVCLLLDCRHTPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL +P V TK DK+ + + IK L P H I S+
Sbjct: 122 QDIQMYRWLQYYRLPAAVVATKADKLSNNQWAKQQSVIKKTLSLA----PEH-SLIAFSA 176
Query: 198 VTGLGRDELL------LHMSQLRN 215
TG GRDELL L Q RN
Sbjct: 177 ETGRGRDELLDVIKDWLQADQPRN 200
>gi|373106648|ref|ZP_09520948.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
gi|371651587|gb|EHO17013.1| ribosome biogenesis GTP-binding protein YsxC [Stomatobaculum
longum]
Length = 223
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 114/201 (56%), Gaps = 9/201 (4%)
Query: 15 GHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGK 74
G+SQIK+ G P+ PEFA G+SNVGKSSL+NALV +K LA TS +PGK
Sbjct: 21 GNSQIKDAVLQFVLGVTSALPESVLPEFAFAGKSNVGKSSLLNALVNRKALARTSAQPGK 80
Query: 75 TQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
TQ IN + VN + Y VDLPGYG+A A + + W + Y + L V LL+D
Sbjct: 81 TQTINFYRVNGAVYFVDLPGYGYASASEAVKASWGKMIERYLHEDKQLRAVFLLLDLRHA 140
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY--PHHPPW 192
P + D+ NW+ +P V TK DK+K ++ ++ ++L+RE P P
Sbjct: 141 PSENDVLMYNWIIDQGLPAVLVGTKADKLKRSQ-------LEKQKKLLRETLGAPKETPL 193
Query: 193 IMTSSVTGLGRDELLLHMSQL 213
I+ SSVT GR+ELL ++++
Sbjct: 194 ILFSSVTKQGREELLRLVAEM 214
>gi|388496914|gb|AFK36523.1| unknown [Medicago truncatula]
Length = 183
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 81/97 (83%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
IL GSNI++ YA +QI + +FVKSS R +DCP D PEFA++GRSNVGKSSL+N++VR
Sbjct: 81 ILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVR 140
Query: 62 KKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA 98
+K+LALTSKKPGKTQLINHF VN SWY+VDLPGYG
Sbjct: 141 RKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGVC 177
>gi|422340208|ref|ZP_16421162.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370148|gb|EHG17536.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 194
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 118/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I++ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIRKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|315645734|ref|ZP_07898858.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex
V453]
gi|315279212|gb|EFU42522.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex
V453]
Length = 214
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + +FV S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKADFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMIARKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN Y+VD PGYG+AK R + + Y LNRE L VLL++D PP K
Sbjct: 62 LNYYRVNDDLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLNREELKLVLLIVDMRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL N P+ V TK D K+ K RR +++K + + P+H ++M SS
Sbjct: 122 DDISMYEWLQHYNRPVCVVATKAD--KIPKTRR-QKHVKIVKDTLGFK-PYH-SFVMFSS 176
Query: 198 VTGLGRDEL 206
GLG+DEL
Sbjct: 177 ELGLGKDEL 185
>gi|237742955|ref|ZP_04573436.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|421144654|ref|ZP_15604563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|229430603|gb|EEO40815.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|395488961|gb|EJG09807.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 194
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 116/196 (59%), Gaps = 10/196 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ +FVKS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIKKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMS 211
SS+T GRDE+L M
Sbjct: 174 SSLTNKGRDEILDFME 189
>gi|357009626|ref|ZP_09074625.1| GTP-binding protein YsxC [Paenibacillus elgii B69]
Length = 216
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN ++ +K LA TS KPGKTQ
Sbjct: 2 KVNQAEFIISAVGPSQYPTDALPEIALAGRSNVGKSSLINRMISRKNLARTSSKPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N + VDLPGYG+A+ R W F + Y L+RE L VLL+ID PP K
Sbjct: 62 LNYYKINSDLFFVDLPGYGYAQVSKTEREKWGKFIENYLLHREFLKLVLLVIDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D +WL + PL V TK DK+ +K + +++K ++ + + P ++ SS
Sbjct: 122 DDQAMYSWLKHHGTPLCIVTTKADKIPRSKWQ---QHLKIVKETLGAD--KSDPVVLFSS 176
Query: 198 VTGLGRDEL 206
GLG+DEL
Sbjct: 177 ELGLGKDEL 185
>gi|422939794|ref|ZP_16967166.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|339890663|gb|EGQ79756.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 194
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 119/200 (59%), Gaps = 10/200 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I++ +F+KS+ KD P++ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEELDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINGEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N + +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+T GRDE+L M + N
Sbjct: 174 SSLTNKGRDEILNFMEEKLN 193
>gi|407796094|ref|ZP_11143050.1| GTP-binding protein YsxC [Salimicrobium sp. MJ3]
gi|407019448|gb|EKE32164.1| GTP-binding protein YsxC [Salimicrobium sp. MJ3]
Length = 195
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E E V S+ P D PE A+ GRSNVGKSS IN ++++K LA TS KPGKTQ
Sbjct: 2 RVNEAEIVISAVSKTQYPSDPIPEIALAGRSNVGKSSFINTMIQRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++NKS++ VD+PGYG+AK R W YF RE LV +L++D P
Sbjct: 62 LNFYIINKSFHFVDVPGYGYAKVSKAERTRWGKMMDEYFGEREQLVSAVLVVDLRHEPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D ++ +++P+T + TK DK+K KG+RP + ++LIRE P I+
Sbjct: 122 EDCMMYDYFKYHDLPVTIIATKMDKVK--KGKRPAQ-----KKLIREVLEVDEKDPLILF 174
Query: 196 SSVTGLGRDE 205
S+ T G+DE
Sbjct: 175 SAETSEGKDE 184
>gi|289766536|ref|ZP_06525914.1| GTP-binding protein [Fusobacterium sp. D11]
gi|289718091|gb|EFD82103.1| GTP-binding protein [Fusobacterium sp. D11]
Length = 194
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 8/199 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I++ +F+KS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN+FL+N +YIVDLPGYGFAK P + W + Y ++ + V +L+D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKI-VFVLLDIRRVPS 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D++ WL N++ +FTK DK+ + + + IK+ E+ H S
Sbjct: 121 DEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------S 174
Query: 197 SVTGLGRDELLLHMSQLRN 215
++T GRDE+L M + N
Sbjct: 175 ALTNKGRDEILDFMEEKLN 193
>gi|433444019|ref|ZP_20409098.1| ribosome biogenesis GTP-binding protein [Anoxybacillus flavithermus
TNO-09.006]
gi|432001832|gb|ELK22700.1| ribosome biogenesis GTP-binding protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 193
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I VE V S+ R + P PEFA+ GRSNVGKSS IN ++ +K A TS KPGKTQ
Sbjct: 2 KITNVEMVISAVRQEQYPAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++Y VD+PGYGFAK R W + YF RE L LL++D PP K
Sbjct: 62 LNFYRINDAFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L NIP + TK DK+ K ++ ++ K +LI ++ I+ S+
Sbjct: 122 DDVMMYEFLKHYNIPTLVIATKADKIPRGKWQQHEKVAKETLRLISDD-----ELIIFSA 176
Query: 198 VTGLGRDE 205
TG G+DE
Sbjct: 177 ETGQGKDE 184
>gi|294053817|ref|YP_003547475.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita
akajimensis DSM 45221]
gi|293613150|gb|ADE53305.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita
akajimensis DSM 45221]
Length = 216
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 95/152 (62%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ F S+G +DCP PEFA +GRSNVGKSSLIN L KK LA+TS KPGKTQ
Sbjct: 2 KIETAVFRASAGALEDCPPSSLPEFAFVGRSNVGKSSLINMLTGKKGLAMTSSKPGKTQR 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N SW++VDLPGYG+AK + D++ Y RE+L + LL+D+ + PQ
Sbjct: 62 INIFKINDSWHLVDLPGYGYAKLSKSKQHDFNVHVSAYLNERENLKQIFLLVDSQLEPQG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
DL A WL +P + + TK D+ +K R
Sbjct: 122 GDLAFAEWLEHCKLPYSVILTKTDRSSDSKVR 153
>gi|167628601|ref|YP_001679100.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
gi|238687891|sp|B0TFJ0.1|ENGB_HELMI RecName: Full=Probable GTP-binding protein EngB
gi|167591341|gb|ABZ83089.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
Length = 205
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IKE EFV S+ + + P+D+ PE A++GRSNVGKSSLIN L ++ LA TS PGKTQ
Sbjct: 2 KIKEAEFVISAVKGEQYPEDNLPEVALVGRSNVGKSSLINKLCNRRHLARTSSTPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N++ YIVDLPGYG+A R W + Y R L GV+ L+D PP K
Sbjct: 62 LNFYRINQAAYIVDLPGYGYASVSKTQRASWGPMMEHYLKKRLQLRGVIQLVDIRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL I + TK D K+ +GR +++K +Q + P P I+ S+
Sbjct: 122 DDIAMREWLNHFKIGAAVIATKAD--KINRGRYA-KHVKQIRQDL--AIPKEIPIIVFSA 176
Query: 198 VTGLGRDELL 207
TG G++++L
Sbjct: 177 ETGHGKEDVL 186
>gi|333370331|ref|ZP_08462342.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
gi|332978063|gb|EGK14801.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437]
Length = 200
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E EFV S+ P D PE A+ GRSNVGKSSLIN L+ +K LA TS KPGKTQ
Sbjct: 2 KVTESEFVISAVGPAQYPADALPEIALAGRSNVGKSSLINRLIHRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + +N + + D+PGYGFAK P + W +GY NR+ L GV+ +ID PP +
Sbjct: 62 INFYRINGALFFADMPGYGFAKVPKSVKAAWGRMIEGYLSNRDELRGVIQVIDVRHPPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL +P V TK D K+ +GR +++K ++ +R P I+ S+
Sbjct: 122 DDVAMYEWLKHYRMPTMIVATKAD--KIPRGRW-QKHLKQVREGLR--LEAGVPLILFSA 176
Query: 198 VTGLGRDEL 206
TG G++E+
Sbjct: 177 QTGQGKEEV 185
>gi|85860199|ref|YP_462401.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophus
aciditrophicus SB]
gi|119369274|sp|Q2LVW9.1|ENGB_SYNAS RecName: Full=Probable GTP-binding protein EngB
gi|85723290|gb|ABC78233.1| GTP-binding protein [Syntrophus aciditrophicus SB]
Length = 196
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I VEFVKS+ P PE A +GRSNVGKSSLIN L+R+K+LA TS PG+TQL
Sbjct: 2 KIVTVEFVKSATLPSGYPPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN+ VDLPGYGFA+ P+ + +W + Y +RE L V+ ++D P +
Sbjct: 62 INFFNVNQELLFVDLPGYGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIRRDPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL WL FV TK DK+ + +R +++ L P P ++ S+
Sbjct: 122 EDLALKGWLDYYGRRTLFVLTKSDKLSRGESKRRQRSVQESLAL-----PEMP--LIFSA 174
Query: 198 VTGLGRDELL 207
TGLGR+ +L
Sbjct: 175 KTGLGRERIL 184
>gi|193215228|ref|YP_001996427.1| ribosome biogenesis GTP-binding protein YsxC [Chloroherpeton
thalassium ATCC 35110]
gi|238692681|sp|B3QS35.1|ENGB_CHLT3 RecName: Full=Probable GTP-binding protein EngB
gi|193088705|gb|ACF13980.1| GTP-binding protein HSR1-related [Chloroherpeton thalassium ATCC
35110]
Length = 193
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 113/198 (57%), Gaps = 15/198 (7%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ EF KS R +D PKD PE A GRSNVGKSSL+N L+ KK+LA S PGKT+
Sbjct: 2 KIESAEFYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTRE 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FLVN +Y VDLPGYGFAK + +W +GY +R L ++LLID+ P
Sbjct: 62 INFFLVNGKYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDSRHPALP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK---VAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
IDL+ +L V TK DK+ +AK +R E K+F + +IM
Sbjct: 122 IDLEMNEFLSFFGRRFAIVRTKTDKLNQSALAKSKRESE--KAF---------YDFEFIM 170
Query: 195 T-SSVTGLGRDELLLHMS 211
SSVTG G+ ELL +S
Sbjct: 171 DFSSVTGKGKKELLSVLS 188
>gi|261418335|ref|YP_003252017.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC61]
gi|297529187|ref|YP_003670462.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
C56-T3]
gi|319767706|ref|YP_004133207.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC52]
gi|448238931|ref|YP_007402989.1| ribosome biogenesis GTP-binding protein [Geobacillus sp. GHH01]
gi|261374792|gb|ACX77535.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC61]
gi|297252439|gb|ADI25885.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
C56-T3]
gi|317112572|gb|ADU95064.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y412MC52]
gi|445207773|gb|AGE23238.1| ribosome biogenesis GTP-binding protein [Geobacillus sp. GHH01]
Length = 195
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ E V S+ + + P RPE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N S+Y VD+PGYGFA+ R W + + YF RE L +LL+D PP K
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREVLKAAVLLVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP+ + TK D KV +G+ ++ K ++ +R P I+ S+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKAD--KVPRGKH-QKHAKIARETLR--MADGDPLILFSAE 177
Query: 199 TGLGRDE 205
TG G+DE
Sbjct: 178 TGQGKDE 184
>gi|385799533|ref|YP_005835937.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
gi|309388897|gb|ADO76777.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
praevalens DSM 2228]
Length = 199
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + EF KS + +DCP+ +PE A GRSNVGKSSLIN + ++K+LA TS PG+TQ
Sbjct: 2 KINKAEFYKSVYKYEDCPRLQQPEVAFSGRSNVGKSSLINRMTKQKKLARTSNTPGRTQC 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F V+ +Y+VDLPGYGFA P + DW+ Y RE+LVGV+ +ID+ P K
Sbjct: 62 LNYFNVDDKFYLVDLPGYGFANVPQKVKDDWAELIDTYLNYRENLVGVVQIIDSRHKPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D NWL + + V TK D K++ +R + +Q+L N + SS
Sbjct: 122 DDKLMVNWLQASGLNFLIVATKVD--KISNNKRAKQKKLIYQEL---NLTKDDNFTFFSS 176
Query: 198 VTGLGRDELLLHMSQL 213
G G E+ ++ L
Sbjct: 177 QNGEGSKEVYKYLEFL 192
>gi|375009747|ref|YP_004983380.1| GTP-binding protein engB [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288596|gb|AEV20280.1| GTP-binding protein engB [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 195
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ E V S+ + + P RPE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VKKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N S+Y VD+PGYGFA+ R W + YF RE L +LL+D PP K
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGKMMETYFTTREVLKAAVLLVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP+ + TK D KV +G+ ++ K ++ +R P I+ S+
Sbjct: 123 DVMMYEFLKHYEIPVIVIATKAD--KVPRGKH-QKHAKIARETLR--MADGDPLILFSAE 177
Query: 199 TGLGRDE 205
TG G+DE
Sbjct: 178 TGQGKDE 184
>gi|404328531|ref|ZP_10968979.1| GTP-binding protein YsxC [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 212
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + E++ S+ PKD PE A+ GRSNVGKSS IN ++ ++ L TS+KPGKTQ
Sbjct: 2 KINQAEYIISAVGPGQYPKDGLPEIALAGRSNVGKSSFINKMLGRRNLVRTSEKPGKTQK 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F +N+S+Y VD+PGYG+AK + W + YF RE L V+ ++D PP K
Sbjct: 62 LNYFKINRSFYFVDVPGYGYAKVSKQDKAAWGRMLEAYFSEREMLSAVVHVVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ ++L N P+ + TK DK+K KG+ + +Q+I + P P I+
Sbjct: 122 DDVTMHDYLAYFNHPVITIATKADKIK--KGQ-----YQKNRQIIARDLKLSPDDPLILF 174
Query: 196 SSVTGLGRDE 205
SSVTG+G+DE
Sbjct: 175 SSVTGMGKDE 184
>gi|257126668|ref|YP_003164782.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia buccalis
C-1013-b]
gi|257050607|gb|ACV39791.1| small GTP-binding protein [Leptotrichia buccalis C-1013-b]
Length = 195
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 10/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPK-DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I + EFVKS+ KD P ++ EF+ +GRSNVGKSSLIN+L ++K LA TSK PG+TQ
Sbjct: 2 EINKSEFVKSAVVEKDYPDFNNIVEFSFIGRSNVGKSSLINSLTKRKSLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFL-NRESLVGVLLLIDASVPP 135
LIN+FL+N + VDLPGYGFAK PD + +W + Y + NRE + V LL+D P
Sbjct: 62 LINYFLINDKIHFVDLPGYGFAKVPDAVKKNWGKTIESYLISNREKV--VFLLLDLRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL I +FTK DK+ +E K +++ ++ +
Sbjct: 120 SNEDMEMLKWLEHFGIEYYIIFTKADKLS------NNEKFKQLKEIRKKLVFKNEDVFFY 173
Query: 196 SSVTGLGRDELL 207
SS+ GR+ELL
Sbjct: 174 SSLKNTGREELL 185
>gi|430750765|ref|YP_007213673.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Thermobacillus
composti KWC4]
gi|430734730|gb|AGA58675.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Thermobacillus
composti KWC4]
Length = 195
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV + R + P+D PE A+ GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KIVSTEFVIGAVRHEQLPEDGLPEIALAGRSNVGKSSLINRMIERKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN S Y VD PGYG+AK R W F + Y R+ L LL++D PP +
Sbjct: 62 LNFYRVNGSLYFVDFPGYGYAKVSKAQRAKWGRFIESYIRERKQLKLQLLIVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D +WL IP V TK DK+ P + +++RE P P +M
Sbjct: 122 DDRLMYDWLRHFGIPTCVVATKADKV-------PRTRRERHLRVVRETLGMTPDVPLVMF 174
Query: 196 SSVTGLGRDEL 206
SS TG GR+EL
Sbjct: 175 SSETGEGREEL 185
>gi|237743263|ref|ZP_04573744.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|260495114|ref|ZP_05815243.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_33]
gi|336401436|ref|ZP_08582205.1| GTP-binding protein engB [Fusobacterium sp. 21_1A]
gi|336420040|ref|ZP_08600286.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
11_3_2]
gi|423137612|ref|ZP_17125255.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis F0419]
gi|229433042|gb|EEO43254.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|260197557|gb|EEW95075.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
3_1_33]
gi|336161023|gb|EGN64039.1| GTP-binding protein engB [Fusobacterium sp. 21_1A]
gi|336162181|gb|EGN65163.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
11_3_2]
gi|371959810|gb|EHO77485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 194
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 10/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I++ +F+KS+ KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 KIRKADFIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+FL+N +YIVDLPGYGFAK P + W + Y + R+ LV VLL D P
Sbjct: 62 LINYFLINDEFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL N++ +FTK DK+ + + + IK+ E+ H
Sbjct: 120 SDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDNEDVFFH------ 173
Query: 196 SSVTGLGRDELL 207
S++T GRDE+L
Sbjct: 174 SAITNKGRDEIL 185
>gi|15895894|ref|NP_349243.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum ATCC 824]
gi|337737847|ref|YP_004637294.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum DSM 1731]
gi|384459357|ref|YP_005671777.1| GTPase EngB [Clostridium acetobutylicum EA 2018]
gi|24418388|sp|Q97FU0.1|ENGB_CLOAB RecName: Full=Probable GTP-binding protein EngB
gi|15025663|gb|AAK80583.1|AE007761_2 Predicted GTPase, YSXC B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
gi|325510046|gb|ADZ21682.1| GTPase EngB [Clostridium acetobutylicum EA 2018]
gi|336293511|gb|AEI34645.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
acetobutylicum DSM 1731]
Length = 200
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF+ S+ K P D + E A +GRSNVGKSSLINA+ +++L S PGKT+L+
Sbjct: 3 IKQAEFIISAAWKKQFPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPGKTRLV 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F++N +Y VDLPGYG+AK WS +GY + RE L V+LL+D+ P K
Sbjct: 63 NFFMINNDFYFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVILLVDSRHKPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIMTS 196
D+ NW+ + + TK DK+K + E +K+ ++LI+E + + S
Sbjct: 123 DITMYNWIKYYDYKCIVIATKSDKIKRS------EKVKN-EKLIKETLKFNDSDEFYFFS 175
Query: 197 SVTGLGRDELLLHMSQLRNY 216
S T GRDEL+ ++ NY
Sbjct: 176 SATKQGRDELINNICSGINY 195
>gi|260891335|ref|ZP_05902598.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
hofstadii F0254]
gi|260858718|gb|EEX73218.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia
hofstadii F0254]
Length = 196
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 113/192 (58%), Gaps = 10/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPK-DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+I + EFVKS+ KD P+ ++ EF+ +GRSNVGKSSLIN+L ++K LA TSK PG+TQ
Sbjct: 2 EISKSEFVKSAVVEKDYPEFNNTVEFSFIGRSNVGKSSLINSLTKRKNLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFL-NRESLVGVLLLIDASVPP 135
LIN+FL+N + VDLPGYGFAK P+ + +W + Y + NRE + V LL+D P
Sbjct: 62 LINYFLINNKIHFVDLPGYGFAKVPEAVKRNWGKTIESYLVSNREKV--VFLLLDLRRVP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ WL I +FTK DK+ +E K +++ ++ +
Sbjct: 120 SNEDMEMLKWLEHFEIEYYIIFTKADKLS------NNEKFKQLKEIRKKLVFKNEDVFFY 173
Query: 196 SSVTGLGRDELL 207
SS+ GR ELL
Sbjct: 174 SSLKNTGRKELL 185
>gi|410662249|ref|YP_006914620.1| GTP-binding protein EngB [Dehalobacter sp. CF]
gi|409024605|gb|AFV06635.1| GTP-binding protein EngB [Dehalobacter sp. CF]
Length = 195
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 108/190 (56%), Gaps = 11/190 (5%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ + + P+ RPE A+ GRSNVGKSSLIN LV +K LA K PGKTQ IN F +N
Sbjct: 3 SAVKPQQYPEGTRPELAVSGRSNVGKSSLINKLVNRKGLAKVGKTPGKTQTINFFNINDE 62
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
WY+VDLPGYG+AK TRM W + YF RE+L GV+ L+D P + D L
Sbjct: 63 WYLVDLPGYGYAKVSQETRMQWGKMMQTYFRLRENLKGVIQLVDIRHQPTEEDRMMLEML 122
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW---IMTSSVTGLGR 203
NNIP+ V TK D K+A+G+RP + ++I E++ W I SS G G
Sbjct: 123 KVNNIPVLVVATKAD--KIARGQRP-----KYLKIIAESF-KMSDWKTIIPFSSEDGTGL 174
Query: 204 DELLLHMSQL 213
EL M +
Sbjct: 175 QELNQAMDDI 184
>gi|188585731|ref|YP_001917276.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229813286|sp|B2A1E8.1|ENGB_NATTJ RecName: Full=Probable GTP-binding protein EngB
gi|179350418|gb|ACB84688.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 193
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E++ S+ + P + PE + +GRSNVGKSSLIN L+ +K LA TSK+PGKT+
Sbjct: 2 KVTNAEYMASAYLSSQFPSEMYPEISFIGRSNVGKSSLINTLINRKNLAYTSKQPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+NKS Y VDLPGYGFAK + DW Y R +L +L+ID P+
Sbjct: 62 INFFLINKSLYFVDLPGYGFAKVSKTMQKDWEQLVNAYLSQRNTLKLSILIIDGRHGPKD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+D ++L P+ V TK DK+K K ++ ++S +L +++ I SS
Sbjct: 122 ADIDMFDYLLDFERPVLLVATKMDKVKANKRKQRITEMRSALELDQDD-----ELITFSS 176
Query: 198 VTGLGRDEL 206
TG G++EL
Sbjct: 177 ATGEGKNEL 185
>gi|354583582|ref|ZP_09002480.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus lactis
154]
gi|353197462|gb|EHB62943.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus lactis
154]
Length = 216
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFVISAVGPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN+ Y+VD PGYG+AK R + + Y L+R+ L VLL++D PP K
Sbjct: 62 LNYYRVNEDLYLVDFPGYGYAKVSKSQRAAFGEMVEKYLLSRDELKLVLLVVDMRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENY---PHHPPWIM 194
D+ WL + P+ V TK D K+ K RR + ++++E PHH ++M
Sbjct: 122 DDVSMYEWLQHYDRPVCVVATKAD--KIPKTRR-----QKHVKIVKETLGFQPHH-SFVM 173
Query: 195 TSSVTGLGRDEL 206
SS GLG++EL
Sbjct: 174 FSSELGLGKEEL 185
>gi|311031430|ref|ZP_07709520.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. m3-13]
Length = 194
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P + PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTQAEIVISAVKPEQYPSEFLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N+ + VD+PGYGFAK P R W + Y NRE L VL ++D PP K
Sbjct: 62 LNFYLINEMLHFVDVPGYGFAKVPKSERDAWGRMMETYLTNREQLRAVLQIVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +P+ + TK DK+ K ++ + IK + +E+ I+ SS
Sbjct: 122 DDVTMYEYLKHYELPVVVIATKADKIPKGKWQKHLKVIKETLGMDKED-----ELILFSS 176
Query: 198 VTGLGRDEL 206
TG G+DE+
Sbjct: 177 ETGQGKDEV 185
>gi|340751564|ref|ZP_08688374.1| GTP-binding protein engB [Fusobacterium mortiferum ATCC 9817]
gi|229420529|gb|EEO35576.1| GTP-binding protein engB [Fusobacterium mortiferum ATCC 9817]
Length = 201
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 117/192 (60%), Gaps = 10/192 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRP-EFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK+ EFVKS+ KD P + + EFA +GRSNVGKSSLIN++ +K+LA TSK PG+TQ
Sbjct: 2 KIKQAEFVKSAVYEKDYPMELKNIEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN+F VN +YIVDLPGYGFAK P + +W + Y + R+ LV VLL D P
Sbjct: 62 LINYFKVNNEFYIVDLPGYGFAKVPKEMKAEWGKTMERYVASARKKLVFVLL--DIRRIP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+ D++ WL ++IP +FTK DK+ +E K + + ++ H+
Sbjct: 120 SEEDMEMLVWLDHHDIPFKIIFTKMDKV------SNNEKFKCLKDIKKKVEFHNDDVFFH 173
Query: 196 SSVTGLGRDELL 207
SS+ G++++L
Sbjct: 174 SSLNDTGKEDIL 185
>gi|212638449|ref|YP_002314969.1| ribosome biogenesis GTP-binding protein YsxC [Anoxybacillus
flavithermus WK1]
gi|226741194|sp|B7GH28.1|ENGB_ANOFW RecName: Full=Probable GTP-binding protein EngB
gi|212559929|gb|ACJ32984.1| GTP-binding protein YscX, possible signaling factor [Anoxybacillus
flavithermus WK1]
Length = 193
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I VE V S+ + + P PEFA+ GRSNVGKSS IN ++ +K A TS KPGKTQ
Sbjct: 2 KITNVEMVISAVKQEQYPAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++Y VD+PGYGFAK R W + YF RE L LL++D PP K
Sbjct: 62 LNFYRINDAFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L NIP + TK DK+ K ++ + K +LI ++ I+ S+
Sbjct: 122 DDVMMYEFLKHYNIPTLVIATKADKIPRGKWQQHAKVAKETLRLISDD-----ELIIFSA 176
Query: 198 VTGLGRDE 205
TG G+DE
Sbjct: 177 ETGQGKDE 184
>gi|222053643|ref|YP_002536005.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter daltonii
FRC-32]
gi|254783197|sp|B9LZU0.1|ENGB_GEOSF RecName: Full=Probable GTP-binding protein EngB
gi|221562932|gb|ACM18904.1| small GTP-binding protein domain protein [Geobacter daltonii
FRC-32]
Length = 207
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK VEF+KS+ RA P D PE A GRSNVGKSSLIN LV +K L TS PG+TQLI
Sbjct: 3 IKYVEFIKSATRAAHYPPGDLPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN + +VDLPGYGFAK P + W + Y R +L GV+L++D P
Sbjct: 63 NFFDVNGQFTLVDLPGYGFAKVPLAVKKQWGPMMENYLAKRANLRGVILILDIRRTPVAE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
D+ +WL +I V TKCD KV+K R
Sbjct: 123 DIQMLHWLQAYSIKPILVITKCD--KVSKNER 152
>gi|225848212|ref|YP_002728375.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644647|gb|ACN99697.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 194
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK VEF+KS+ + +D P D+PE A++GRSNVGKSSLINA+ K+ +A S PGKT+LI
Sbjct: 3 IKSVEFIKSAVKPEDYPPPDKPEVAVVGRSNVGKSSLINAIF-KRSVAKVSSTPGKTRLI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +N Y VDLPGYGFA R+ W + Y LNRE+L +++L+D PP +
Sbjct: 62 NFFTLNNDIYFVDLPGYGFASVSQKERLSWQKMIENYLLNRENLKLIIMLVDTRYPPTNL 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL V TK DK+ ++ + + IK L + P + S+
Sbjct: 122 DILMKQWLDTFEKQYFVVGTKIDKLNQSEKAKAKKVIKETLDL-----DDNTPIFLVSAK 176
Query: 199 TGLGRDELL 207
G G D L+
Sbjct: 177 EGTGIDNLV 185
>gi|295425158|ref|ZP_06817863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
gi|295065217|gb|EFG56120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylolyticus DSM 11664]
Length = 196
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 102/168 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E+ S+ R PKDD PE A+ GRSNVGKSSLIN LV +K LA TS +PGKTQ
Sbjct: 2 KINSSEYAVSAVREDQYPKDDLPEIALAGRSNVGKSSLINTLVNRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +LVNKS+Y+VD+PGYG+AK R ++ + Y R +L G+++L+D+ P K
Sbjct: 62 LNFYLVNKSFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRANLKGLIILVDSRHVPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D + N+P+ V TK DK+K ++ + N+K L +N
Sbjct: 122 DDQSMYEYAQYLNLPILVVCTKIDKLKKSQLTKVKANLKKVFDLSYDN 169
>gi|116751466|ref|YP_848153.1| HSR1-related GTP-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116700530|gb|ABK19718.1| GTP-binding protein, HSR1-related [Syntrophobacter fumaroxidans
MPOB]
Length = 198
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF ++ R+ P D PE A GRSNVGKSSLIN L+++++L TS+ PG+TQ I
Sbjct: 7 IKSAEFKTAAVRSGQYPDDHLPEVAFAGRSNVGKSSLINCLLQRRKLVRTSRTPGQTQTI 66
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y VDLPGYGFA+ P R W + Y R +L GV+ ++DA PP
Sbjct: 67 NFFLINGLFYCVDLPGYGFARVPMAVRAQWGPMVESYLGGRPNLRGVVQILDARHPPSPD 126
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL NWL IP V TK DK+ K + R+ ++ SS
Sbjct: 127 DLKLWNWLIDRKIPAVPVLTKADKVPRTKWDAAASRASLSLGIPRDRL------LLFSSE 180
Query: 199 TGLGRDELLLHMS 211
T GRD LLL ++
Sbjct: 181 TRHGRDALLLQVA 193
>gi|315917135|ref|ZP_07913375.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|317058769|ref|ZP_07923254.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313684445|gb|EFS21280.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313691010|gb|EFS27845.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 204
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 10/196 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK +++KS+ KD P+ + EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQ
Sbjct: 2 RIKRADYLKSAVYEKDYPEILNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPP 135
LIN F +N+ +YIVDLPGYGFAK P + +W S + Y ++ R+ LV VLL D P
Sbjct: 62 LINFFTINQEFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRKKLVFVLL--DIRRIP 119
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+ D++ WL + +P +FTK DK+ +E + + + ++ H+
Sbjct: 120 SEEDMEMLRWLDFHELPFKIIFTKTDKIS------NNEKFRLLKDIRKKIEFHNEDVFFY 173
Query: 196 SSVTGLGRDELLLHMS 211
SS++ GR+E+L M
Sbjct: 174 SSLSHKGREEVLQFME 189
>gi|188996268|ref|YP_001930519.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931335|gb|ACD65965.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 197
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S +K V+FVKS+ + +D P D+PE AI+GRSNVGKSSLINA+ K+ +A S PGKT+
Sbjct: 2 SSLKSVKFVKSAVKPEDFPPPDKPEIAIVGRSNVGKSSLINAIF-KRSIAKVSATPGKTK 60
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN FL+N Y VDLPGYGFA + +W + Y LNRE+L +++L+D PP
Sbjct: 61 LINFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPT 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+D+ WL P V TK DK+ ++ + ++ I+ L ++ P + S
Sbjct: 121 NLDILMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSKD-----VPVYLVS 175
Query: 197 SVTGLGRDEL 206
+ G D+L
Sbjct: 176 AKEGTNIDKL 185
>gi|255528414|ref|ZP_05395213.1| GTP-binding protein HSR1-related protein [Clostridium
carboxidivorans P7]
gi|296184881|ref|ZP_06853292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
carboxidivorans P7]
gi|255507895|gb|EET84336.1| GTP-binding protein HSR1-related protein [Clostridium
carboxidivorans P7]
gi|296050663|gb|EFG90086.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
carboxidivorans P7]
Length = 195
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 115/200 (57%), Gaps = 9/200 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ P+D+R E A +GRSNVGKSSLIN LV +++L S PGKT+L
Sbjct: 2 EIKQSEFVISAVVPNQYPQDNRVEIAFVGRSNVGKSSLINTLVNRRKLVKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N +Y VDLPGYG+AK + W + Y RE L V+LL+D P +
Sbjct: 62 VNFFLINNEFYFVDLPGYGYAKVSKSEKESWGKVIERYLTGREQLKKVMLLVDCRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP-HHPPWIMT- 195
D+ W+ N V TK DK+K A+ R+ N+K +IRE + I+T
Sbjct: 122 DDIIMYKWIKHYNYDAIIVATKIDKLKKAELRK---NLK----VIRETFELSDDEEILTF 174
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS+ LG++ELL + Q N
Sbjct: 175 SSLKKLGKEELLDAIEQCIN 194
>gi|427412665|ref|ZP_18902857.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella ratti
ACS-216-V-Col6b]
gi|425716472|gb|EKU79456.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella ratti
ACS-216-V-Col6b]
Length = 230
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 109/206 (52%), Gaps = 25/206 (12%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
++V S+ R P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+ IN F
Sbjct: 29 KYVASAVRPDQYPEGDTVEVAFLGRSNVGKSSLINSLCNHRGLALVSGQPGKTKTINFFT 88
Query: 83 VNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLID 130
+ W++VDLPGYG+AK R WSSF Y L E L+ + LL+D
Sbjct: 89 ITSKEDISETEERRYEWFLVDLPGYGYAKTDKSNRNIWSSFIADYILQSERLMLLCLLVD 148
Query: 131 ASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ---LIRENYP 187
P ID + NWL +PL V TK DK+ N K QQ I+EN+P
Sbjct: 149 GRHPELPIDQEAFNWLREAGVPLQIVVTKVDKL----------NSKERQQNMRFIKENFP 198
Query: 188 HHPPWIMTSSVTGLGRDELLLHMSQL 213
P I SS+ GR+ LL ++Q+
Sbjct: 199 CEAPAIPYSSLKHTGRELLLQRINQV 224
>gi|254293246|ref|YP_003059269.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
gi|254041777|gb|ACT58572.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814]
Length = 213
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV FVK + P DRPE A GRSNVGKSSLINAL +K+LA S +PG+TQ IN
Sbjct: 23 EVNFVKGVVNMQGLPPADRPEIAFAGRSNVGKSSLINALFNRKQLARASGQPGRTQEINF 82
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + ++ Y+VDLPGYGFAKAP W++FT+ Y R +L V LLID+ +D
Sbjct: 83 FTILEALYVVDLPGYGFAKAPKAVVDKWTNFTQTYLRGRTNLQRVFLLIDSRRGVGDVDR 142
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
L R + V TK DK+K ++ D+ I I++N HP ++TS+
Sbjct: 143 GIMKVLDRAALNYQIVLTKADKLKKSE---LDKVIDDAVVAIKKNPAAHPRIMLTSAEKN 199
Query: 201 LGRDEL 206
+G EL
Sbjct: 200 IGLPEL 205
>gi|268319666|ref|YP_003293322.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
gi|262398041|emb|CAX67055.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785]
Length = 194
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKISKSLDLSQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|254515981|ref|ZP_05128041.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3]
gi|219675703|gb|EED32069.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3]
Length = 231
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 89/151 (58%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ EF+ S+ + CP D E A GRSN GKSS IN+L + +LA TSK PG+TQLIN
Sbjct: 23 RKAEFLTSAAKVSQCPDDSGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKTPGRTQLIN 82
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + IVDLPGYG+AK P + DW+ + Y R+SL G++LL D P Q D
Sbjct: 83 FFTVGEQQRIVDLPGYGYAKVPQKLKQDWTRQMEAYLQERQSLRGLILLSDCRHPLQPFD 142
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
L W +P+ + TKCDK+ G++
Sbjct: 143 LQMLGWAAEAEMPVHMLLTKCDKLSNGAGKQ 173
>gi|227889796|ref|ZP_04007601.1| GTPase [Lactobacillus johnsonii ATCC 33200]
gi|227849660|gb|EEJ59746.1| GTPase [Lactobacillus johnsonii ATCC 33200]
Length = 194
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSLDLSQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|406983139|gb|EKE04386.1| ribosome biogenesis GTP-binding protein YsxC [uncultured bacterium]
Length = 192
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 9/196 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ SS K+CP + PE A++GRSNVGKSS INA+ +K LA TS PGKT+L
Sbjct: 2 KIINAEFITSSDCLKNCPDFNLPEIAMIGRSNVGKSSFINAITNRKNLARTSNTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + +N I DLPGYG+AK + W + Y NRE L GV+ LIDA Q
Sbjct: 62 INFYKINDELIITDLPGYGYAKTSKAEQEKWRKTLEDYLTNREPLAGVIQLIDARHSVQN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +WL NIP+ V TK D + ++ KS ++ + P+ S+
Sbjct: 122 NDIQMRDWLDYYNIPVITVATKVDTIS------KNQATKSVNEIAKTFNTEVLPF---SA 172
Query: 198 VTGLGRDELLLHMSQL 213
TG+G+D+ + + L
Sbjct: 173 KTGIGKDQTIKRIDSL 188
>gi|42518938|ref|NP_964868.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
johnsonii NCC 533]
gi|385826074|ref|YP_005862416.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
gi|38606910|gb|AAR25449.1| GTP binding protein [Lactobacillus johnsonii]
gi|41583225|gb|AAS08834.1| probable GTP-binding protein EngB [Lactobacillus johnsonii NCC 533]
gi|329667518|gb|AEB93466.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026]
Length = 194
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSLDLSQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|308274309|emb|CBX30908.1| Probable GTP-binding protein engB [uncultured Desulfobacterium sp.]
Length = 202
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 90/145 (62%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EFVKS+ + P++ +PE A GRSNVGKSSLIN L+ +K L TS PG+TQLI
Sbjct: 3 IKSAEFVKSAVKPSQYPEESQPEIAFAGRSNVGKSSLINTLLNRKNLVKTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N + VD+PGYG+AK P R W + + Y R++L GV+L++D P
Sbjct: 63 NFFLINDTLGFVDIPGYGYAKVPAAVRKTWGTMIETYIQTRKTLKGVVLILDLRRIPGPE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM 163
++ +WL NIP V TK DK+
Sbjct: 123 EITFMDWLNYYNIPFILVLTKADKL 147
>gi|116629800|ref|YP_814972.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
ATCC 33323]
gi|238853431|ref|ZP_04643810.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282851696|ref|ZP_06261061.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311110559|ref|ZP_07711956.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|420148371|ref|ZP_14655639.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
gi|122273262|sp|Q042T8.1|ENGB_LACGA RecName: Full=Probable GTP-binding protein EngB
gi|116095382|gb|ABJ60534.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|238834003|gb|EEQ26261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
202-4]
gi|282557664|gb|EFB63261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
224-1]
gi|311065713|gb|EFQ46053.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
MV-22]
gi|398399923|gb|EJN53519.1| Putative GTP-binding protein EngB [Lactobacillus gasseri CECT 5714]
Length = 194
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDTEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHDPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSLDLKQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|224368192|ref|YP_002602355.1| protein EngB [Desulfobacterium autotrophicum HRM2]
gi|259645891|sp|C0QLA5.1|ENGB_DESAH RecName: Full=Probable GTP-binding protein EngB
gi|223690908|gb|ACN14191.1| EngB [Desulfobacterium autotrophicum HRM2]
Length = 194
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+VEF+KS+ + + + E A GRSNVGKSSLIN L+ +K L TS KPG TQLI
Sbjct: 3 IKDVEFIKSATKPSEYTEPLFLEVAFAGRSNVGKSSLINTLINRKSLVKTSSKPGCTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N + +VDLPGYG+AK R W + Y RE+L ++LLID PQ+
Sbjct: 63 NFFLLNGNLSLVDLPGYGYAKVSKKIRAQWGPMIERYLTVRETLRAIVLLIDMRREPQRE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
+LD NW + IP V TK DK+ K + K+ + + I SS
Sbjct: 123 ELDLINWFTAHAIPYRIVLTKADKLSKTKQQ------KNISAIAKGLGMEQDRLIAFSSK 176
Query: 199 TGLGRDELLLHMSQLRN 215
T LGRD L + + N
Sbjct: 177 TRLGRDRLWQELDTMLN 193
>gi|197120176|ref|YP_002140603.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
bemidjiensis Bem]
gi|238690880|sp|B5EEM1.1|ENGB_GEOBB RecName: Full=Probable GTP-binding protein EngB
gi|197089536|gb|ACH40807.1| GTPase EngB [Geobacter bemidjiensis Bem]
Length = 214
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ EF+KS+ + P+ + PE A GRSNVGKSSL+N LV +K L TS PG+TQLI
Sbjct: 3 VKQTEFIKSATKPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN + +VDLPGYG+AK P + +W + Y R +L GV+L++D P +
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NY 186
DL WL ++P V TKCDK+ + R I QL +E NY
Sbjct: 123 DLQMLAWLRAFSVPPIVVITKCDKVSKNERARQSAVIMEKMQLKKEELNY 172
>gi|417837748|ref|ZP_12483986.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
gi|338761291|gb|EGP12560.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
johnsonii pf01]
Length = 194
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDAEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNKLYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSLDLSQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|403379302|ref|ZP_10921359.1| GTP-binding protein YsxC [Paenibacillus sp. JC66]
Length = 195
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P D PE A+ GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KIKQAEFVISAVSSAQYPNDALPEIALAGRSNVGKSSLINRMLGRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N+ + VDLPGYG+AK R +W F + Y L RE L +LLL+D PP K
Sbjct: 62 LNYYRINEQLFFVDLPGYGYAKVSKTMRAEWGKFIERYLLEREPLKLLLLLVDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D WL + IPL V TK DK+ K R + +K QL P P IM
Sbjct: 122 DDQAMYEWLHYHEIPLCVVATKADKIPKGKWARHSKQVKETLQL-------DPAIPLIMF 174
Query: 196 SSVTGLGRDEL 206
SS TG+G+DEL
Sbjct: 175 SSETGMGKDEL 185
>gi|300361499|ref|ZP_07057676.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
gi|300354118|gb|EFJ69989.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri
JV-V03]
Length = 194
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EFV S+ K PKDD PEFA+ GRSNVGKSSLIN +V +++LA TS++PGKTQ
Sbjct: 2 KVVDTEFVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN Y+VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYKVNNELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLVLLVDARHDPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ N+ +IP+ V TK DK+K + + + I L +EN P SS
Sbjct: 122 DDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSLDLKQENVSFLP----FSS 177
Query: 198 VTGLGRDEL 206
V+ L D+
Sbjct: 178 VSKLNVDKF 186
>gi|138896215|ref|YP_001126668.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus
thermodenitrificans NG80-2]
gi|196250171|ref|ZP_03148865.1| small GTP-binding protein [Geobacillus sp. G11MC16]
gi|166225956|sp|A4IRG9.1|ENGB_GEOTN RecName: Full=Probable GTP-binding protein EngB
gi|134267728|gb|ABO67923.1| GTP-binding protein-like protein [Geobacillus thermodenitrificans
NG80-2]
gi|196210355|gb|EDY05120.1| small GTP-binding protein [Geobacillus sp. G11MC16]
Length = 195
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + E V S+ + + P RPE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 ITKAELVISAVKPEQYPDSGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N S+Y VD+PGYGFA+ R W + YF RE+L LLL+D PP K
Sbjct: 63 NFYLINDSFYFVDVPGYGFARVSKQERQKWGKMMETYFTTRETLKAALLLVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ + IP+ + TK D KV +G++ ++ K ++ +R I+ SS
Sbjct: 123 DVMMYEFFKHYEIPVIVIATKAD--KVPRGKQ-QKHAKIARETLR--LAAGDSLILFSSE 177
Query: 199 TGLGRDE 205
TG G++E
Sbjct: 178 TGQGKEE 184
>gi|220932326|ref|YP_002509234.1| HSR1-like GTP-binding protein [Halothermothrix orenii H 168]
gi|254783200|sp|B8CY70.1|ENGB_HALOH RecName: Full=Probable GTP-binding protein EngB
gi|219993636|gb|ACL70239.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168]
Length = 199
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK FV S+ D P + PEFA GRSNVGKSSLIN LV +++LA TS +PG+TQ
Sbjct: 2 KIKNPRFVISAYDFDDFPTHNWPEFAFSGRSNVGKSSLINTLVNRRKLARTSSRPGRTQS 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F ++ +Y+VDLPGYGFA P + +W +GY NR +L G++ ++DA P +
Sbjct: 62 INFFNIDDRFYLVDLPGYGFANVPRKVKEEWGRLIEGYLNNRPNLAGIVQIVDARHKPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL +W+ + IP TK DK+ ++ +E IK + L+ E++ + S+
Sbjct: 122 DDLMMVDWIKASGIPCLIAATKVDKISRGSRKKQEELIK--KTLVLEDFDGQ--FTFFSA 177
Query: 198 VTGLGRDEL 206
TG G+ ++
Sbjct: 178 KTGEGKKQV 186
>gi|423719070|ref|ZP_17693252.1| ribosome biogenesis GTP-binding protein ysxC [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367973|gb|EID45248.1| ribosome biogenesis GTP-binding protein ysxC [Geobacillus
thermoglucosidans TNO-09.020]
Length = 193
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + E V S+ + + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N+S Y VD+PGYGFAK R W + YF RE L V+L++D PP K
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ +L IP V TK DK+ P + Q+++RE N I+ S
Sbjct: 123 DVMMYEFLKHYEIPTIIVATKADKV-------PKGKWQKHQKVVRETLNIADGDELIVFS 175
Query: 197 SVTGLGRDE 205
+ TG G++E
Sbjct: 176 AETGQGKEE 184
>gi|336234454|ref|YP_004587070.1| GTP-binding protein engB [Geobacillus thermoglucosidasius C56-YS93]
gi|335361309|gb|AEH46989.1| GTP-binding protein engB [Geobacillus thermoglucosidasius C56-YS93]
Length = 193
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + E V S+ + + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N+S Y VD+PGYGFAK R W + YF RE L V+L++D PP K
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ +L IP V TK DK+ P + Q+++RE N I+ S
Sbjct: 123 DVMMYEFLKHYEIPAIIVATKADKV-------PKGKWQKHQKVVRETLNIADGDELIVFS 175
Query: 197 SVTGLGRDE 205
+ TG G++E
Sbjct: 176 AETGQGKEE 184
>gi|347534625|ref|YP_004841295.1| GTP-binding protein engB [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504681|gb|AEN99363.1| putative GTP-binding protein engB [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 195
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ +V+ V S+ K PK PE LGRSNVGKSSL N L+ +++ A TS +PGKTQ +
Sbjct: 3 VTDVDLVMSAVDPKQYPKTGYPEIGFLGRSNVGKSSLTNVLINRRDYAHTSGQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN Y VD+PGYG+AK R W+S + Y R++L GV+ LID P +
Sbjct: 63 NFYEVNYKLYFVDVPGYGYAKVSKTEREKWASMIETYLTQRDTLRGVISLIDGRHEPTEF 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL +WL NIP+ +V TK DK+ +K + + +++ QL + +M S+
Sbjct: 123 DLQMRDWLEYYNIPVLYVATKVDKISKSKFKHQETILRNKLQLKPDE-----ELVMFSAK 177
Query: 199 TGLGRDEL 206
T +G+D++
Sbjct: 178 TKVGKDQI 185
>gi|342731986|ref|YP_004770825.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455403|ref|YP_005667997.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|417961245|ref|ZP_12603702.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-2]
gi|417967675|ref|ZP_12608744.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-co]
gi|418372236|ref|ZP_12964328.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329441|dbj|BAK56083.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|346983745|dbj|BAK79421.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|380333925|gb|EIA24416.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-2]
gi|380340898|gb|EIA29434.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-co]
gi|380341905|gb|EIA30350.1| Putative GTP-binding protein engB [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 188
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 111/189 (58%), Gaps = 8/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + +F+KS+ KD P D E AI+GRSNVGKSSLIN+L+++K +A S PGKT+ +
Sbjct: 3 IYDSKFIKSAVSCKDFPNDGLKEIAIVGRSNVGKSSLINSLLQRKRIAKVSSTPGKTRTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N S+Y+VDLPGYG+AK R W + YF NR + V+LLID+ P +
Sbjct: 63 NFFLINNSFYLVDLPGYGYAKVSKSERDSWKYIAESYFNNRVYIDRVILLIDSRHDPFES 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ NW+ N + + TK DK+ ++ ++ + K +Q + N + SS+
Sbjct: 123 DVTMYNWINSLNYKIDIIATKSDKLSYSQIKKNEHIFK--RQFSKSN------ILFYSSL 174
Query: 199 TGLGRDELL 207
RDEL+
Sbjct: 175 KNYNRDELV 183
>gi|253702485|ref|YP_003023674.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M21]
gi|259645898|sp|C6E8C5.1|ENGB_GEOSM RecName: Full=Probable GTP-binding protein EngB
gi|251777335|gb|ACT19916.1| small GTP-binding protein [Geobacter sp. M21]
Length = 214
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K EF+KS+ R P+ PE A GRSNVGKSSL+N LV +K L TS PG+TQLI
Sbjct: 3 VKNTEFIKSATRPAHYPEGHLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN + +VDLPGYG+AK P + +W + Y R +L GV+L++D P +
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRTPTEE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
DL WL ++P V TKCD KV+K R
Sbjct: 123 DLQMLTWLRAFSVPPVIVITKCD--KVSKNER 152
>gi|444920162|ref|ZP_21240005.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508481|gb|ELV08650.1| Putative GTP-binding protein EngB [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 90/141 (63%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P +D E A GRSN GKSS +NAL + LA TSK PG+TQLIN+F V
Sbjct: 13 FLTSANQLNQLPDNDGREVAFAGRSNAGKSSALNALTSQNTLARTSKTPGRTQLINYFEV 72
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
++ Y+VDLPGYG+AK P+ R+ W S +GYF R++LVG+++L+D P +DL
Sbjct: 73 DEKSYLVDLPGYGYAKVPERIRLHWRSVLQGYFETRKNLVGLVMLMDVRHPLTPLDLQML 132
Query: 144 NWLGRNNIPLTFVFTKCDKMK 164
W N+P + TK DK+K
Sbjct: 133 EWCEAQNLPTHILLTKADKLK 153
>gi|304407486|ref|ZP_07389138.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
gi|304343437|gb|EFM09279.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ R P+D PE A+ GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KITSAEFIISAVRPDQYPEDALPEIALAGRSNVGKSSLINRMILRKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N+ Y VD PGYG+AK R W + + RE L VLL++D P K
Sbjct: 62 LNYYKINEQIYFVDFPGYGYAKVSKTEREAWGRMIETFLKVREELKLVLLIVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D +WL IP+ V TK DK+ +K D+ IK L++E P IM
Sbjct: 122 DDCLMYDWLKHYEIPICIVVTKADKIPKSKW---DKQIK----LVKETLQADPTDKVIMF 174
Query: 196 SSVTGLGRDEL 206
SS GLGR++L
Sbjct: 175 SSELGLGREQL 185
>gi|404494413|ref|YP_006718519.1| GTP-binding protein YsxC [Pelobacter carbinolicus DSM 2380]
gi|119369227|sp|Q3A0Y0.2|ENGB_PELCD RecName: Full=Probable GTP-binding protein EngB
gi|114843263|gb|ABA89977.2| GTPase EngB [Pelobacter carbinolicus DSM 2380]
Length = 207
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QIK EF+KS+ + P D PE A GRSNVGKSSLIN LV ++ L TS PG+TQL
Sbjct: 2 QIKSAEFIKSAAKPVGYPPGDLPEVAFAGRSNVGKSSLINVLVNRRGLVRTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F VN+ + +VDLPG+GFAK P + W T+ Y R +L V+LL D P+
Sbjct: 62 LNFFEVNQHFMLVDLPGFGFAKVPVSVKKAWGRMTRTYLEERTNLKAVVLLFDIRREPRD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR-------------PDENIKSFQQLIRE 184
+L +WL NIP V TK D KV K RR P E F L RE
Sbjct: 122 EELQLLDWLEELNIPTIPVITKVD--KVTKNRRRAQIRPILEATGLPQEAFSFFSALTRE 179
>gi|187776854|ref|ZP_02993327.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC
15579]
gi|187775513|gb|EDU39315.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
sporogenes ATCC 15579]
Length = 199
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 9 EIKKAEFVISAVKKAQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 68
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N++ Y VDLPGYG+AK + +W + Y + R+ L ++LL+D+ P
Sbjct: 69 INFFLINENMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTS 128
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 129 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 181
Query: 196 SSVTGLGRDELL 207
SS+ G++E+L
Sbjct: 182 SSLNKEGKEEVL 193
>gi|227893378|ref|ZP_04011183.1| GTPase [Lactobacillus ultunensis DSM 16047]
gi|227864793|gb|EEJ72214.1| GTPase [Lactobacillus ultunensis DSM 16047]
Length = 196
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ + PKD+ PE A+ GRSNVGKSSLIN L+++K LA TS +PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N ++VN +Y+VD+PGYG+AK R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYMVNDDFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ NIP+ V TK DK+K ++ + +KS L NY H + SSV
Sbjct: 123 DIAMYNYAQYLNIPILVVCTKMDKIKKSQVNKVMSGLKSKLDL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDEL 206
T L EL
Sbjct: 179 TKLHVAEL 186
>gi|312110030|ref|YP_003988346.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y4.1MC1]
gi|311215131|gb|ADP73735.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
Y4.1MC1]
Length = 193
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + E V S+ + + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VTKAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N+S Y VD+PGYGFAK R W YF RE L V+L++D PP K
Sbjct: 63 NFYLINESLYFVDVPGYGFAKVSKKEREAWGKMMGTYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ +L IP V TK DK+ P + Q+++RE N I+ S
Sbjct: 123 DVMMYEFLKHYEIPAIIVATKADKV-------PKGKWQKHQKVVRETLNIADGDELIVFS 175
Query: 197 SVTGLGRDE 205
+ TG G++E
Sbjct: 176 AETGQGKEE 184
>gi|322421712|ref|YP_004200935.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
gi|320128099|gb|ADW15659.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18]
Length = 211
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 89/145 (61%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K +F+KS+ R P+ + PE A GRSNVGKSSL+N LV +K L TS PG+TQLI
Sbjct: 3 VKNTQFIKSATRPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKSLVRTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN + +VDLPGYG+AK P + DW + Y R +L GV+L++D P +
Sbjct: 63 NFFQVNDDFMLVDLPGYGYAKVPLAVKKDWRPMMETYLAKRANLRGVVLILDIRRVPNED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM 163
DL WL ++P V TKCDK+
Sbjct: 123 DLQMLAWLRAYSVPPIIVVTKCDKL 147
>gi|339448217|ref|ZP_08651773.1| GTP-binding protein YsxC [Lactobacillus fructivorans KCTC 3543]
Length = 195
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ +VE V S+ K P PE LGRSNVGKSSL N L+ +K+ A TS +PGKTQ +
Sbjct: 3 VNDVELVMSAVDPKQYPSTGYPEIGFLGRSNVGKSSLTNVLINRKDYAHTSGQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN ++Y VD+PGYG+AK R W+ + Y RE L GV+ LID P
Sbjct: 63 NFYRVNDAFYFVDVPGYGYAKVSKSEREKWAQMIETYLTQREQLRGVVNLIDGRHAPSDY 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +WL IP+ +V TK DK+ +K ++ ++ ++ +L P +M S+
Sbjct: 123 DIQMRDWLDYYGIPVLYVATKVDKIPKSKRKKQEQILRKGLEL-----EDDEPLVMFSAK 177
Query: 199 TGLGRDEL 206
T +G D++
Sbjct: 178 TKVGADQV 185
>gi|148266199|ref|YP_001232905.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
uraniireducens Rf4]
gi|189037180|sp|A5G964.1|ENGB_GEOUR RecName: Full=Probable GTP-binding protein EngB
gi|146399699|gb|ABQ28332.1| small GTP-binding protein [Geobacter uraniireducens Rf4]
Length = 204
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK VEF+KS+ R P D PE A GRSNVGKSSLIN LV +K L TS PG+TQLI
Sbjct: 3 IKNVEFIKSATRPAHYPAGDFPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN + +VDLPGYGFA+ P + +W + Y R +L GV+L++D P
Sbjct: 63 NFFDVNGEFTLVDLPGYGFARVPLAVKKEWGPMMETYLSKRSNLRGVILILDIRRTPVAE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDE 173
D+ +WL ++ V TKCD KV+K R +
Sbjct: 123 DVQMLHWLRAYSVKPIIVVTKCD--KVSKNERAKQ 155
>gi|406887457|gb|EKD34232.1| hypothetical protein ACD_75C02423G0008 [uncultured bacterium]
Length = 194
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 6/191 (3%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+VEF+ S + K P + PE + GRSNVGKSSLIN L+ +K L S +PGKTQ +N+
Sbjct: 5 KVEFLLSVHQLKQLPPVELPEISFAGRSNVGKSSLINTLIGRKSLVKVSARPGKTQGLNY 64
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F V ++IVDLPGYGFAK P V + W S + +RESL V++++D P+K D
Sbjct: 65 FRVGDDFFIVDLPGYGFAKVPKVMQNAWQSLISTFLESRESLKCVVVIMDIRHEPKKQDT 124
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
WL +IP V+TK DK+ R + N+ IR I+ S+ TG
Sbjct: 125 QLIQWLKEKSIPCLPVYTKTDKLS-GNEREKNANLLDAGHSIRRQ-----DRILFSAKTG 178
Query: 201 LGRDELLLHMS 211
GRDEL+ ++
Sbjct: 179 QGRDELIAALA 189
>gi|118581676|ref|YP_902926.1| ribosome biogenesis GTP-binding protein YsxC [Pelobacter
propionicus DSM 2379]
gi|166225967|sp|A1AU48.1|ENGB_PELPD RecName: Full=Probable GTP-binding protein EngB
gi|118504386|gb|ABL00869.1| small GTP-binding protein [Pelobacter propionicus DSM 2379]
Length = 200
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+KS+ + KD P + PE A +GRSNVGKSSLIN L +K L TS PG+TQL
Sbjct: 2 EVIKAEFIKSAVKPKDYPLETLPEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N +VDLPGYG+AKAP R W + Y R +L V+L++D P
Sbjct: 62 INFFDINGVLTLVDLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDIRRIPSD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM-KVAKGRR 170
DL WL +IP FV TKCDK+ KV + ++
Sbjct: 122 GDLQMLGWLETYDIPPIFVLTKCDKLSKVERAKQ 155
>gi|167038047|ref|YP_001665625.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040912|ref|YP_001663897.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X514]
gi|256752434|ref|ZP_05493293.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914948|ref|ZP_07132264.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X561]
gi|307723818|ref|YP_003903569.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X513]
gi|320116456|ref|YP_004186615.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|238687604|sp|B0K530.1|ENGB_THEPX RecName: Full=Probable GTP-binding protein EngB
gi|238687677|sp|B0KBA1.1|ENGB_THEP3 RecName: Full=Probable GTP-binding protein EngB
gi|166855152|gb|ABY93561.1| small GTP-binding protein [Thermoanaerobacter sp. X514]
gi|166856881|gb|ABY95289.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748703|gb|EEU61748.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889883|gb|EFK85029.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X561]
gi|307580879|gb|ADN54278.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
sp. X513]
gi|319929547|gb|ADV80232.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 192
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VEF +S+ + PKD+ P+ I+GRSNVGKS+LIN ++ +K LA TS +PGKT+
Sbjct: 2 KIKTVEFARSAFNEEQYPKDNLPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + ++L L LID P +
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSQNLRHGLFLIDIRRNPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D NW N+P T V TK DK+ ++ R+ E+I ++ RE I+ S+
Sbjct: 122 DDFLMINWFKHKNLPFTVVLTKADKVNKSESRKAVEDICKIFKINREEV------IIFSA 175
Query: 198 VTGLGRDELL 207
+ +G ++L
Sbjct: 176 LEKMGVSQVL 185
>gi|358467640|ref|ZP_09177330.1| hypothetical protein HMPREF9093_01810, partial [Fusobacterium sp.
oral taxon 370 str. F0437]
gi|357067501|gb|EHI77614.1| hypothetical protein HMPREF9093_01810, partial [Fusobacterium sp.
oral taxon 370 str. F0437]
Length = 179
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 10/186 (5%)
Query: 32 KDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIV 90
KD P+ D+ EFA +GRSNVGKSSLIN+L + +LA TSK PG+TQLIN+FL+N +YIV
Sbjct: 1 KDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLINYFLINDEFYIV 60
Query: 91 DLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPPQKIDLDCANWLGRN 149
DLPGYGFAK P + W + Y + R+ LV VLL D P D++ WL N
Sbjct: 61 DLPGYGFAKVPKEMKKQWGQTMERYIASKRKKLVFVLL--DIRRVPSDEDIEMLEWLEYN 118
Query: 150 NIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLH 209
+ +FTK DK+ + + + IK+ +E+ H SS+T GRDE+L
Sbjct: 119 EMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFEKEDVFFH------SSLTNKGRDEILTF 172
Query: 210 MSQLRN 215
M + N
Sbjct: 173 MEEKLN 178
>gi|118444919|ref|YP_878859.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium novyi NT]
gi|166225951|sp|A0Q2K7.1|ENGB_CLONN RecName: Full=Probable GTP-binding protein EngB
gi|118135375|gb|ABK62419.1| GTP-binding protein [Clostridium novyi NT]
Length = 200
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 9/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF+ S+ R P D+R E A +GRSN GKSSLIN + +++LA TS PGKT+ I
Sbjct: 3 IKNSEFIISAVRPSQYPVDNRVEMAFVGRSNAGKSSLINVITNRRKLAKTSSTPGKTRQI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y VDLPGYGFAK + W S + Y +NR L ++LL+D+ P K
Sbjct: 63 NFFLINNEFYFVDLPGYGFAKVSKSEQQKWGSMMEQYLINRHQLKKIVLLVDSRHKPSKE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ W+ V TK DK+ R+ D + +++I+E N ++ S
Sbjct: 123 DVQMYEWIKYYGYETIIVATKSDKL-----RKND--FQKNRKIIKETLNIRDEDKFMFFS 175
Query: 197 SVTGLGRDELLLHMSQ 212
S+ G++ELL +S+
Sbjct: 176 SLNKSGKEELLEILSE 191
>gi|331701127|ref|YP_004398086.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929]
gi|329128470|gb|AEB73023.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929]
Length = 195
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ S+ K P PE A++GRSNVGKSSL N L+ + + A TS +PGKTQ
Sbjct: 2 EVHNVDLTISAVAEKQYPNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AKA +R W + Y RE L GV+ L+D P
Sbjct: 62 LNFYNIEDKLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ NWL NIP+ V TK DK+ K + + IK QL + P I+ S+
Sbjct: 122 DDVSMHNWLKYYNIPMLTVATKMDKISSGKWNKQESLIKKTLQL-----DAYEPLILFSA 176
Query: 198 VTGLGRDEL 206
+T G++E+
Sbjct: 177 LTKTGKNEI 185
>gi|294501425|ref|YP_003565125.1| hypothetical protein BMQ_4688 [Bacillus megaterium QM B1551]
gi|295706773|ref|YP_003599848.1| hypothetical protein BMD_4674 [Bacillus megaterium DSM 319]
gi|384044739|ref|YP_005492756.1| GTPase EngB [Bacillus megaterium WSH-002]
gi|294351362|gb|ADE71691.1| GTP-binding conserved hypothetical protein [Bacillus megaterium QM
B1551]
gi|294804432|gb|ADF41498.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
gi|345442430|gb|AEN87447.1| GTPase EngB [Bacillus megaterium WSH-002]
Length = 195
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ R + PK++ PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTQADIVISAVRPEQYPKENLPEFALAGRSNVGKSSFINKMLNRKSLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYGFAK R W + Y NRE L VL+++D P K
Sbjct: 62 LNFFLINEILHFVDVPGYGFAKVSKKEREAWGKMIETYLTNREQLKAVLMIVDLRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ +L +++P+ + TK DK+ P + +++RE P I
Sbjct: 122 DDVMMYEFLKHHDLPVMVIATKADKI-------PKGKWQKHLKVVRETLDLDPNDELIHF 174
Query: 196 SSVTGLGRDE 205
SS TG G+D+
Sbjct: 175 SSETGEGKDK 184
>gi|269123059|ref|YP_003305636.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis
DSM 12112]
gi|268314385|gb|ACZ00759.1| GTP-binding protein HSR1-related protein [Streptobacillus
moniliformis DSM 12112]
Length = 191
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 18 QIKEVEFVKSSGRAKDCP-KDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+IK E+ KS + D P K + E A +GRSNVGKSSLIN +V++ LA TSK PG+TQ
Sbjct: 2 EIKSAEYSKSCIKLSDYPEKMNNTEIAFVGRSNVGKSSLINTIVKRNNLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
L+N FLVNK Y VDLPGYGFAK P + +W + Y LN E V +L+D P
Sbjct: 62 LVNFFLVNKDRYFVDLPGYGFAKVPANIKKNWGNIISEY-LNSERKKVVFVLLDIRRVPS 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D++ +L NI +FTKCDK+ + R + IK + E+ H S
Sbjct: 121 GEDIEMLEYLEHYNIEYYIIFTKCDKLSNNEKFRQLKEIKKKLEFSNEDVFFH------S 174
Query: 197 SVTGLGRDELLLHMSQL 213
S+ +G E+L + +L
Sbjct: 175 SLKNIGTAEILDFIDKL 191
>gi|338811976|ref|ZP_08624175.1| ribosome biogenesis GTP-binding protein YsxC [Acetonema longum DSM
6540]
gi|337275945|gb|EGO64383.1| ribosome biogenesis GTP-binding protein YsxC [Acetonema longum DSM
6540]
Length = 214
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E++ S+ R + P D PE A +GRSNVGKSSLIN++ R + LALTS PGKTQ IN F
Sbjct: 15 AEYLISAVRQEQYPPGDEPEIAFIGRSNVGKSSLINSVCRHRGLALTSATPGKTQTINFF 74
Query: 82 LV-----------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLID 130
V + + VDLPGYG+AK TR W+ F + YFL L + LID
Sbjct: 75 RVFFKLSHNNSEARRQIFFVDLPGYGYAKTGRSTRRQWAKFIEEYFLQSSRLKRIYQLID 134
Query: 131 ASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP 190
PP + D+ WL R +P+ V TK DK+ ++ +K +I P
Sbjct: 135 IRHPPMESDILFHQWLRRQGLPVKIVATKSDKITRSR-------MKEHMGVIARTLGIEP 187
Query: 191 PWIMT-SSVTGLGRDELLLHMSQL 213
I+ S+++G GRDELL + Q+
Sbjct: 188 EQILIHSALSGAGRDELLDDIVQI 211
>gi|237755489|ref|ZP_04584111.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692353|gb|EEP61339.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 197
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 6/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+K V+FVKS+ + +D P ++PE AI+GRSNVGKSSLINA+ K+ +A S PGKT+L
Sbjct: 3 SLKSVKFVKSAVKPEDFPPPNKPEIAIVGRSNVGKSSLINAIF-KRSIAKVSATPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N Y VDLPGYGFA + +W + Y LNRE+L +++L+D PP
Sbjct: 62 INFFLLNDDIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D+ WL P V TK DK+ ++ + ++ I+ L + + P + S+
Sbjct: 122 LDVLMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSK-----NVPVYLVSA 176
Query: 198 VTGLGRDEL 206
G D+L
Sbjct: 177 KEGTNIDKL 185
>gi|148381176|ref|YP_001255717.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 3502]
gi|153931772|ref|YP_001385551.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. ATCC 19397]
gi|153935229|ref|YP_001388957.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A str. Hall]
gi|153938105|ref|YP_001392578.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
F str. Langeland]
gi|168179123|ref|ZP_02613787.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|170757263|ref|YP_001782866.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
B1 str. Okra]
gi|226950655|ref|YP_002805746.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|384463546|ref|YP_005676141.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|421839007|ref|ZP_16272694.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
gi|148290660|emb|CAL84789.1| probable GTP-binding protein Engb [Clostridium botulinum A str.
ATCC 3502]
gi|152927816|gb|ABS33316.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152931143|gb|ABS36642.1| GTP-binding protein [Clostridium botulinum A str. Hall]
gi|152934001|gb|ABS39499.1| GTP-binding protein [Clostridium botulinum F str. Langeland]
gi|169122475|gb|ACA46311.1| GTP-binding protein [Clostridium botulinum B1 str. Okra]
gi|182669944|gb|EDT81920.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|226842026|gb|ACO84692.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A2 str. Kyoto]
gi|295320563|gb|ADG00941.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|409736332|gb|EKN37764.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001627]
Length = 194
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 4 EIKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F++N + Y VDLPGYG+AK + +W + Y + R+ L ++LL+D+ P
Sbjct: 64 INFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTS 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 124 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 176
Query: 196 SSVTGLGRDELL 207
SS++ G++E+L
Sbjct: 177 SSLSKEGKEEVL 188
>gi|387819497|ref|YP_005679844.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
gi|322807541|emb|CBZ05116.1| GTP-binding protein EngB [Clostridium botulinum H04402 065]
Length = 199
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 9 EIKKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 68
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F++N + Y VDLPGYG+AK + +W + Y + R+ L ++LL+D+ P
Sbjct: 69 INFFVINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTS 128
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 129 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 181
Query: 196 SSVTGLGRDELL 207
SS++ G++E+L
Sbjct: 182 SSLSKEGKEEVL 193
>gi|269120910|ref|YP_003309087.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614788|gb|ACZ09156.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 204
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ +F+KS+ D P+ EFA +GRSNVGKSSLIN+L ++ LA TSK PG+TQL
Sbjct: 2 RIKKTDFIKSAVVINDYPETTEIEFAFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN+ +Y VDLPGYGFAK P+ + +W Y LN + V LL+D P
Sbjct: 62 INFFDVNEDFYFVDLPGYGFAKVPEAVKKNWGKIIADY-LNSDREKIVFLLLDIRRVPSA 120
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ WL +I +FTK DK+ ++ K +++ ++ + S+
Sbjct: 121 EDIEMLKWLEHYSINYYIIFTKTDKLS------NNQKFKQLKEIKKKLEFDNKDVFFYSA 174
Query: 198 VTGLGRDEL 206
+ GR+EL
Sbjct: 175 LKNTGREEL 183
>gi|121534152|ref|ZP_01665977.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
gi|121307255|gb|EAX48172.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
Length = 207
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + ++V S+ R P ++ PE A +GRSNVGKSSLIN+L R LA S PGKTQ I
Sbjct: 8 VIKAQYVASAVRPDQYPPEELPEIAFIGRSNVGKSSLINSLCRHHGLARVSASPGKTQTI 67
Query: 79 NHFLVNK--------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLID 130
N+++V WY+VDLPGYG+A+A R W+ F + YFL L V L+D
Sbjct: 68 NYYVVTAKLPNERRLEWYLVDLPGYGYARAGQTQRRQWTRFVEEYFLRSPRLKLVCQLVD 127
Query: 131 ASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP 190
PPQ D+ WL +N+P+ V TK DK+ R IK+ +L
Sbjct: 128 LRHPPQASDVAMYGWLKTHNLPVQVVATKTDKIGRTHVARHLAAIKNGLKLETGGI---- 183
Query: 191 PWIMTSSVTGLGRDELLLHMSQL 213
I S++ G GRD+LL + Q+
Sbjct: 184 --IAYSALNGQGRDDLLDVIGQI 204
>gi|168183544|ref|ZP_02618208.1| GTP-binding protein [Clostridium botulinum Bf]
gi|237796683|ref|YP_002864235.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
Ba4 str. 657]
gi|182673313|gb|EDT85274.1| GTP-binding protein [Clostridium botulinum Bf]
gi|229260786|gb|ACQ51819.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657]
Length = 194
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 4 EIKKAEFVISAVKRGQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N + Y VDLPGYG+AK + +W + Y + R L ++LL+D+ P
Sbjct: 64 INFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERNQLKKIVLLVDSRHKPTS 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 124 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 176
Query: 196 SSVTGLGRDELL 207
SS++ G++E+L
Sbjct: 177 SSLSKEGKEEVL 188
>gi|239827921|ref|YP_002950545.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp.
WCH70]
gi|259645899|sp|C5D5L1.1|ENGB_GEOSW RecName: Full=Probable GTP-binding protein EngB
gi|239808214|gb|ACS25279.1| small GTP-binding protein [Geobacillus sp. WCH70]
Length = 193
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + E S+ + + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VTKAEIAVSAVKPEQYPDGALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N+S+Y VD+PGYGFA+ R W + YF RE L V+L++D PP K
Sbjct: 63 NFYLINESFYFVDVPGYGFARVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP + TK DK+ K ++ + ++ +I ++ I+ S+
Sbjct: 123 DVMMYEFLKHYQIPTIIIATKADKVPKGKWQKHLKVVRETLNIIEDD-----KLILFSAE 177
Query: 199 TGLGRDE 205
TG G++E
Sbjct: 178 TGQGKEE 184
>gi|395239295|ref|ZP_10417177.1| Probable GTP-binding protein engB [Lactobacillus gigeriorum CRBIP
24.85]
gi|394476533|emb|CCI87154.1| Probable GTP-binding protein engB [Lactobacillus gigeriorum CRBIP
24.85]
Length = 198
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 12/187 (6%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK E+ S+ R PKD+ PE A+ GRSNVGKSSLIN V +K LA TS +PGKTQ +
Sbjct: 3 IKNSEYAVSAVREDQYPKDELPELAMAGRSNVGKSSLINTFVNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +Y+VD+PGYG+A+ R ++ + Y R +L G+L+L+D P K
Sbjct: 63 NFYRVNDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRANLEGILILVDGRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDK------------MKVAKGRRPDENIKSFQQLIRENY 186
D+ + NIP+ V TK DK +K A RP++ + +F + N
Sbjct: 123 DIAMYQYAQYLNIPILVVATKIDKVKRNQRNKSIAGIKKAMNLRPEDELLTFSSFDKTNL 182
Query: 187 PHHPPWI 193
WI
Sbjct: 183 DKLSTWI 189
>gi|253680894|ref|ZP_04861697.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
D str. 1873]
gi|416365424|ref|ZP_11682769.1| GTP-binding protein YsxC [Clostridium botulinum C str. Stockholm]
gi|253562743|gb|EES92189.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
D str. 1873]
gi|338194024|gb|EGO86584.1| GTP-binding protein YsxC [Clostridium botulinum C str. Stockholm]
Length = 196
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF+ S+ + P D+R E A +GRSN GKS+LIN + +K+LA TS PGKT+LI
Sbjct: 3 IKNSEFIISAVKPAQYPTDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y VDLPGYGFAK + W S + Y +NR L ++LL+D+ P K
Sbjct: 63 NFFLINNDFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ W+ V TK DK+K + + +++IRE N + S
Sbjct: 123 DVQMYEWIKYYGYEAIIVATKSDKLK-------KNDFQKNKKIIRETLNIREEDKFTFFS 175
Query: 197 SVTGLGRDELL 207
++ G++ELL
Sbjct: 176 ALNKSGKEELL 186
>gi|330996286|ref|ZP_08320171.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella
xylaniphila YIT 11841]
gi|329573478|gb|EGG55085.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella
xylaniphila YIT 11841]
Length = 157
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 59 LVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN 118
L K+LA TS PGKT LINHFL+NK WY+VDLPGYG+AK + Y L
Sbjct: 2 LANNKKLAKTSSTPGKTLLINHFLINKEWYLVDLPGYGYAKISKKEQEKLQQIISSYILR 61
Query: 119 RESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF 178
RE + + +L+D+ PQKID++ WLG N IP + VFTK DK K K + NI +
Sbjct: 62 REQMTNLFVLVDSRHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTKLKA---NIDIY 118
Query: 179 QQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ ++E + PP+ +TSS GR ELL ++ +
Sbjct: 119 LKTLKEQWEELPPYFITSSENKTGRTELLNYIESI 153
>gi|342214203|ref|ZP_08706904.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 780 str. F0422]
gi|341594434|gb|EGS37123.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 780 str. F0422]
Length = 230
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 9 VVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALT 68
+ GP +I +++ S+ +A P+ D E A LGRSNVGKSSLIN+L + LAL
Sbjct: 20 ITGP-----RIIAAKYIASAVKADQYPEGDTIEIAFLGRSNVGKSSLINSLCNYRGLALV 74
Query: 69 SKKPGKTQLINHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYF 116
S PGKT+ IN F + W++VDLPGYG+AK WSSF Y
Sbjct: 75 SGTPGKTKTINFFSIESKEDLPDDMERRFDWFLVDLPGYGYAKTGGSNTNIWSSFIANYI 134
Query: 117 LNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
L E ++ + LLID P ID + +WL + +PL V TK DK+K+ +E K
Sbjct: 135 LQSERMMLLCLLIDGRHPELPIDQEAFDWLQSHGVPLQIVVTKADKLKM------NERQK 188
Query: 177 SFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ I E YP P I+ SS+ GRD LL ++ +
Sbjct: 189 QLKT-IEERYPTGYPPILYSSLKHTGRDRLLARINAV 224
>gi|58337155|ref|YP_193740.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
acidophilus NCFM]
gi|227903731|ref|ZP_04021536.1| GTPase [Lactobacillus acidophilus ATCC 4796]
gi|81311481|sp|Q5FKR5.1|ENGB_LACAC RecName: Full=Probable GTP-binding protein EngB
gi|58254472|gb|AAV42709.1| GTP-binding protein ENGB family [Lactobacillus acidophilus NCFM]
gi|227868618|gb|EEJ76039.1| GTPase [Lactobacillus acidophilus ATCC 4796]
Length = 196
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK E+ S+ + + PKD+ PE A+ GRSNVGKSSLIN L+++K LA TS +PGKTQ +
Sbjct: 3 IKSSEYAVSAVKEEQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y+VD+PGYG+AK R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLVNDDFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ + NIP+ V TK DK+ K + ++ + ++ + NY H + SSV
Sbjct: 123 DISMYEYAQYLNIPILVVCTKMDKI---KKNQTNKVMTGLRKKLDLNY-DHVTVLTFSSV 178
Query: 199 TGLGRDEL 206
T EL
Sbjct: 179 TKFHVTEL 186
>gi|375309928|ref|ZP_09775206.1| gtpase engb [Paenibacillus sp. Aloe-11]
gi|375077881|gb|EHS56111.1| gtpase engb [Paenibacillus sp. Aloe-11]
Length = 203
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPSQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VD PGYG+AK +R W + Y L RE L VL ++D PP K
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREQLKLVLQMVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +WL N +P+ V TK D K+ K RR + ++I++ P +I
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKAD--KIPKTRR-----EKHYKVIKQELGILPGGLFIPF 174
Query: 196 SSVTGLGRDEL 206
SS G+G++EL
Sbjct: 175 SSEEGMGKEEL 185
>gi|424826853|ref|ZP_18251704.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
gi|365980554|gb|EHN16580.1| GTP-binding protein YsxC [Clostridium sporogenes PA 3679]
Length = 194
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 4 EIKKAEFVISAVKKAQYPGDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N + Y VDLPGYG+AK + +W + Y + R+ L ++LL+D+ P
Sbjct: 64 INFFLINDNMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTG 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 124 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 176
Query: 196 SSVTGLGRDELL 207
SS+ G++E+L
Sbjct: 177 SSLNKEGKEEVL 188
>gi|88705359|ref|ZP_01103070.1| GTP-binding protein engB [Congregibacter litoralis KT71]
gi|88700449|gb|EAQ97557.1| GTP-binding protein engB [Congregibacter litoralis KT71]
Length = 230
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 89/151 (58%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ + CP+D E A GRSN GKSS IN+L + +LA TSK PG+TQLIN
Sbjct: 23 RKAAFLTSAAKVSQCPEDIGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKTPGRTQLIN 82
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + IVDLPGYG+AK P + DW+ + Y R+SL G++LL D P Q D
Sbjct: 83 FFTVGEQQRIVDLPGYGYAKVPQKLKQDWTKQMEAYLQERQSLRGLILLSDCRHPLQPFD 142
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
W ++P+ + TKCDK+ G++
Sbjct: 143 QQMLTWAAEADMPVHMLLTKCDKLSKGAGKQ 173
>gi|390455661|ref|ZP_10241189.1| GTP-binding protein YsxC [Paenibacillus peoriae KCTC 3763]
Length = 203
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPNQFPVDALPEIALAGRSNVGKSSLINRMISRKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VD PGYG+AK +R W + Y L RE L VL ++D PP K
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREQLKLVLQMVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +WL N +P+ V TK D K+ K RR + ++I++ P +I
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKAD--KIPKTRR-----EKHYKVIKQELGILPGGLFIPF 174
Query: 196 SSVTGLGRDEL 206
SS G+G++EL
Sbjct: 175 SSEEGMGKEEL 185
>gi|315038090|ref|YP_004031658.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylovorus GRL 1112]
gi|325956543|ref|YP_004291955.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC]
gi|385817431|ref|YP_005853821.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL1118]
gi|312276223|gb|ADQ58863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
amylovorus GRL 1112]
gi|325333108|gb|ADZ07016.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC]
gi|327183369|gb|AEA31816.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL1118]
Length = 196
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ + PKD+ PE A+ GRSNVGKSSLIN L+++K LA TS +PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y+VD+PGYG+AK R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLVNDEFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ + NIP+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYEYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKNLDL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDEL 206
T L EL
Sbjct: 179 TKLHVAEL 186
>gi|406026623|ref|YP_006725455.1| ribosome biogenesis GTP-binding protein [Lactobacillus buchneri
CD034]
gi|405125112|gb|AFR99872.1| ribosome biogenesis GTP-binding protein [Lactobacillus buchneri
CD034]
Length = 195
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ S+ K P PE A++GRSNVGKSSL N L+ + + A TS +PGKTQ
Sbjct: 2 EVHNVDLTISAVAEKQYPNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AKA +R W + Y RE L GV+ L+D P
Sbjct: 62 LNFYNIEDKLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ NWL NIP+ V TK DK+ K + + IK QL + P I+ S+
Sbjct: 122 DDVSMHNWLKYYNIPMLTVATKMDKISSGKWNKQESLIKKTLQLDADE-----PLILFSA 176
Query: 198 VTGLGRDEL 206
+T G++E+
Sbjct: 177 LTKTGKNEI 185
>gi|295692730|ref|YP_003601340.1| GTP-binding protein engb [Lactobacillus crispatus ST1]
gi|295030836|emb|CBL50315.1| Probable GTP-binding protein engB [Lactobacillus crispatus ST1]
Length = 196
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ PE A+ GRSNVGKSSLIN L+++K LA TS +PGKTQ +
Sbjct: 3 IKSSSYAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN+ +Y+VD+PGYG+AK R ++ + Y R +L G+++L+D+ P K
Sbjct: 63 NFYKVNEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ ++ NIP+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYDYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKLNL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVTELSNWIEK 192
>gi|205374362|ref|ZP_03227160.1| GTPase EngB [Bacillus coahuilensis m4-4]
Length = 193
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ R + P D+ PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ
Sbjct: 2 KVNNAEIVISAVRPEQYPDDNLPEFALAGRSNVGKSSFINKMLGRKSLARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++ + Y VD+PGYG+AK R W + YF +R+ L +L++D PP K
Sbjct: 62 LNFYIIEEQLYFVDVPGYGYAKVSKTERAAWGKMIETYFTSRDKLEAAVLIVDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +++ IP+ + TK DK+ K + + +K QL + + I+ SS
Sbjct: 122 DDIMMYDFIKHYEIPVIIIATKADKIPKGKWDKHKKVVKDTLQLEKGD-----EIIVFSS 176
Query: 198 VTGLGRDE 205
TGLG+D+
Sbjct: 177 ETGLGKDK 184
>gi|310778381|ref|YP_003966714.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus
DSM 2926]
gi|309747704|gb|ADO82366.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus
DSM 2926]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK+ ++VKS+ KD P++ EFA +GRSNVGKSSLIN++ +++LA TSK PG+TQL
Sbjct: 3 IKQADYVKSAVFEKDYPEEVASYEFAFVGRSNVGKSSLINSITGRRKLAKTSKTPGRTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPPQ 136
IN+F++NK ++ VDLPGYGFAK P + + +W + Y + R+ LV VLL D P
Sbjct: 63 INYFIINKEFFFVDLPGYGFAKVPKIMKEEWGKTMETYLASARQKLVFVLL--DIRRIPS 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ D++ WL IP +FTK DK+
Sbjct: 121 EDDINMLKWLEHYEIPFKIIFTKVDKL 147
>gi|308070420|ref|YP_003872025.1| GTP-binding protein engB [Paenibacillus polymyxa E681]
gi|305859699|gb|ADM71487.1| Probable GTP-binding protein engB [Paenibacillus polymyxa E681]
Length = 203
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN L+ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRLINRKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VD PGYG+AK +R W + Y L RE L VL ++D PP K
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +WL N +P+ V TK D K+ K RR + ++I++ P +I
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKAD--KIPKTRR-----EKHYKVIKQELGILPGGLFIPF 174
Query: 196 SSVTGLGRDEL 206
SS G+G++EL
Sbjct: 175 SSEEGMGKEEL 185
>gi|374319916|ref|YP_005073045.1| GTP-binding protein YsxC [Paenibacillus terrae HPL-003]
gi|357198925|gb|AET56822.1| GTP-binding protein YsxC [Paenibacillus terrae HPL-003]
Length = 204
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN L+ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRLISRKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VD PGYG+AK +R W + Y L RE L VL ++D PP K
Sbjct: 62 LNYYRINDDLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +WL + +P+ V TK D K+ K RR + ++I++ P +I
Sbjct: 122 DDIMMHDWLRHHGLPVCVVGTKAD--KIPKTRR-----EKHYKVIKQELGILPGGLFIPF 174
Query: 196 SSVTGLGRDEL 206
SS G+G+DEL
Sbjct: 175 SSEEGMGKDEL 185
>gi|170758960|ref|YP_001788547.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
A3 str. Loch Maree]
gi|169405949|gb|ACA54360.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree]
Length = 194
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+L
Sbjct: 4 EIKKAEFIISAVKKGQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRL 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F++N + Y VDLPGYG+AK + +W + Y + R+ L ++LL+D+ P
Sbjct: 64 INFFVINDNMYFVDLPGYGYAKVSKREKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTS 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D++ NW+ N + V TK DK+K R D I +++IR+ ++
Sbjct: 124 DDINMYNWIKHYNYEVLVVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLI 176
Query: 196 SSVTGLGRDELL 207
SS++ G++E+L
Sbjct: 177 SSLSKEGKEEVL 188
>gi|310643601|ref|YP_003948359.1| GTPase engb [Paenibacillus polymyxa SC2]
gi|309248551|gb|ADO58118.1| GTPase EngB [Paenibacillus polymyxa SC2]
gi|392304351|emb|CCI70714.1| putative GTP-binding protein engB [Paenibacillus polymyxa M1]
Length = 203
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N Y VD PGYG+AK +R W + Y L RE L VL ++D PP K
Sbjct: 62 LNYYRINDELYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +WL N +P+ V TK D K+ K RR + ++I++ P +I
Sbjct: 122 DDIMMYDWLRHNGLPVCVVGTKAD--KIPKTRR-----EKHYKVIKQELGILPGGLFIPF 174
Query: 196 SSVTGLGRDEL 206
SS G+G++EL
Sbjct: 175 SSEEGMGKEEL 185
>gi|336054312|ref|YP_004562599.1| GTPase [Lactobacillus kefiranofaciens ZW3]
gi|333957689|gb|AEG40497.1| GTPase [Lactobacillus kefiranofaciens ZW3]
Length = 196
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 115/200 (57%), Gaps = 11/200 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ + P+D+ PE A+ GRSNVGKSSLIN +++K LA TS +PGKTQ +
Sbjct: 3 IKSSSYAVSAVKESQYPQDNLPEIALAGRSNVGKSSLINTFLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN+ +Y+VD+PGYG+AK R ++ + Y R +L G+++L+D P K
Sbjct: 63 NFYLVNEEFYLVDVPGYGYAKVSQKKRQEFGQMIQDYLETRPNLKGLIILVDGRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ NIP+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYNYAQYLNIPILVVCTKMDKIKKSQVNKTLAQLKKKLDL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWD 218
T LH+++L N+ +
Sbjct: 179 TK-------LHVAELNNWIE 191
>gi|21674964|ref|NP_663029.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium tepidum
TLS]
gi|25452938|sp|Q8KAK5.1|ENGB_CHLTE RecName: Full=Probable GTP-binding protein EngB
gi|21648196|gb|AAM73371.1| GTP-binding protein [Chlorobium tepidum TLS]
Length = 192
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I +F S P D RPE +GRSNVGKSSL+N+L +K LA TS PGKT+L
Sbjct: 2 NITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+F++N + Y VDLPGYG+AK R W GY R + V+LL+D+ P
Sbjct: 62 INYFIINDNLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL+ +L P V TK DK+K A+ + I+S P+ + SS
Sbjct: 122 SDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIESCA-------PNARFIVNYSS 174
Query: 198 VTGLGRDELL 207
++G GRD LL
Sbjct: 175 LSGSGRDRLL 184
>gi|291280219|ref|YP_003497054.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
gi|290754921|dbj|BAI81298.1| GTP-binding protein [Deferribacter desulfuricans SSM1]
Length = 191
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ E++KS+ KD P D PE A +GRSNVGKSS+IN LV +K+L S+KPGKT+ IN
Sbjct: 2 KAEYIKSAVYEKDYPDTDLPEIAFVGRSNVGKSSMINTLVNRKKLVKVSQKPGKTRTINF 61
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F +N VDLPGYG+AK R W + Y R L V+L+ID V P D
Sbjct: 62 FNINDELIFVDLPGYGYAKVSKKDRELWKVMIETYLTKRSQLKAVVLIIDIRVGPTNDDK 121
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
W N+P FTKCDK+ K ++ IK +E +++ SSVT
Sbjct: 122 LMYEWFMAYNVPTIVAFTKCDKLSNNKIQKQLAIIK------KEFGDGLGDYVLFSSVTR 175
Query: 201 LGRDEL 206
G+DEL
Sbjct: 176 RGKDEL 181
>gi|189501178|ref|YP_001960648.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeobacteroides BS1]
gi|238692282|sp|B3EP28.1|ENGB_CHLPB RecName: Full=Probable GTP-binding protein EngB
gi|189496619|gb|ACE05167.1| GTP-binding protein HSR1-related [Chlorobium phaeobacteroides BS1]
Length = 192
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ F KS PK+ PE +GRSNVGKS+L+N+L +K LA TS PGKTQL
Sbjct: 2 KIRNATFYKSVSAIDHLPKEQLPEIVFVGRSNVGKSTLLNSLTARKGLAKTSSTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+F++N+S Y VDLPGYG+AK + +W Y R+S+ V+LLID+ P +
Sbjct: 62 INYFVINESCYFVDLPGYGYAKVDKGKKYEWGKLLSHYVSTRDSITLVVLLIDSRHPDME 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-S 196
D A +L P V TK DK+K + K+ +L ++Y +I+ S
Sbjct: 122 SDHLMAEFLEHCGRPYGVVLTKYDKLK--------QQAKAAARLAVKSYSLKSKFIVNYS 173
Query: 197 SVTGLGRDELLLHMS 211
+++G G++ELL ++
Sbjct: 174 AISGQGKEELLEQLA 188
>gi|297544145|ref|YP_003676447.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296841920|gb|ADH60436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 192
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VEF +S+ + PKDD P+ I GRSNVGKS+LIN ++ +K LA TS KPGKT+
Sbjct: 2 KIKTVEFTRSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + +L LLLID P +
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSRNLRHGLLLIDIRRVPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE 184
DL NW N+P T V TK DK+ ++ ++ +++ + RE
Sbjct: 122 DDLLMINWFKYKNLPFTVVLTKADKVSKSQAQKAVKDVCKIFNINRE 168
>gi|193211890|ref|YP_001997843.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobaculum parvum
NCIB 8327]
gi|238692673|sp|B3QQY9.1|ENGB_CHLP8 RecName: Full=Probable GTP-binding protein EngB
gi|193085367|gb|ACF10643.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 192
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I +F S P D RPE +GRSNVGKSSL+N+L +K LA TS PGKT+L
Sbjct: 2 NITSADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+FL+N++ Y VDLPGYG+AK R W Y + R+ + V+LL+DA P
Sbjct: 62 INYFLINENLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVA---KGRRPDENIKSFQQLIRENYPHHPPWIM 194
D + +L P V TK DK+K A K RR E+ S + I NY
Sbjct: 122 SDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKARRTIESCASNARFI-VNY-------- 172
Query: 195 TSSVTGLGRDELL 207
SS++G GRD+LL
Sbjct: 173 -SSLSGAGRDKLL 184
>gi|404368995|ref|ZP_10974341.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
ulcerans ATCC 49185]
gi|313688287|gb|EFS25122.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium
ulcerans ATCC 49185]
Length = 196
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+K+ +FVKS+ KD P+ + EFA +GRSNVGKSSLIN++ +K+LA TSK PG+TQL
Sbjct: 3 VKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPPQ 136
IN+F +N ++IVDLPGYGFAK P + +W Y + R+ LV VLL I +P Q
Sbjct: 63 INYFKINNEFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIASPRKKLVFVLLDI-RRIPSQ 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D++ +L ++IP +FTK DK+ +E K +++ ++ H+ S
Sbjct: 122 E-DIEMLVYLDHHDIPFKIIFTKIDKV------SNNEKFKVMKEIKKKIEFHNEDVFFHS 174
Query: 197 SVTGLGRDELL 207
S++ G++++L
Sbjct: 175 SLSDNGKEDIL 185
>gi|373496132|ref|ZP_09586680.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
12_1B]
gi|371966043|gb|EHO83535.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp.
12_1B]
Length = 196
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+K+ +FVKS+ KD P+ + EFA +GRSNVGKSSLIN++ +K+LA TSK PG+TQL
Sbjct: 3 VKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPPQ 136
IN+F +N ++IVDLPGYGFAK P + +W Y + R+ LV VLL D P
Sbjct: 63 INYFKINNEFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIASPRKKLVFVLL--DIRRIPS 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D++ +L ++IP +FTK DK+ +E K +++ ++ H+ S
Sbjct: 121 QEDIEMLVYLDHHDIPFKIIFTKMDKV------SNNEKFKVMKEIKKKIEFHNEDVFFHS 174
Query: 197 SVTGLGRDELL 207
S++ G++++L
Sbjct: 175 SLSDNGKEDIL 185
>gi|326803637|ref|YP_004321455.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650781|gb|AEA00964.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae
ACS-120-V-Col10a]
Length = 200
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q + +EF+ S+ K P DRPE A+ GRSNVGKSS IN + K++A S KPGKTQ
Sbjct: 3 QAQNIEFMLSAASPKQYPVSDRPEIALAGRSNVGKSSFINTMTNHKKIARISSKPGKTQQ 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ ++ S Y+VD+PGYG+AK R W YF+ RE+L V LL+D P K
Sbjct: 63 LNYYNLDNSLYLVDVPGYGYAKVSKTERSRWQKQLADYFIQRENLEAVFLLVDFRHRPSK 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ ++L + +P + TK DK+K + + IK L+ E+ + SS
Sbjct: 123 DDINMKDFLDQCQVPYFIIATKADKVKKNQWHNHLQAIKEDLDLVTED-----QILPYSS 177
Query: 198 VTGLGRDE 205
GRDE
Sbjct: 178 ANREGRDE 185
>gi|289577857|ref|YP_003476484.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
italicus Ab9]
gi|289527570|gb|ADD01922.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
italicus Ab9]
Length = 192
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VEF KS+ + PKDD P+ I GRSNVGKS+LIN ++ +K LA TS +PGKT+
Sbjct: 2 KIKTVEFTKSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + +L LLLID P +
Sbjct: 62 INFYLINNKFYLVDLPGYGYAKVSKEMKNQWAHNIETFLNTSRNLRHGLLLIDIRRVPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE 184
DL NW N+P T V TK DK+ ++ ++ +++ + RE
Sbjct: 122 DDLLMINWFKYKNLPFTVVLTKADKVNKSQAQKAVKDVCKIFNINRE 168
>gi|251798420|ref|YP_003013151.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
JDR-2]
gi|247546046|gb|ACT03065.1| small GTP-binding protein [Paenibacillus sp. JDR-2]
Length = 201
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + EF+ S+ R P D PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ
Sbjct: 2 KITQSEFIISAVRPSQYPVDALPEIALAGRSNVGKSSLINKLILRKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN Y VD PGYG+AK R + + Y +R+ L LL+ID P K
Sbjct: 62 LNYYRVNDMVYFVDFPGYGYAKVSKTQRELFGQMIETYIRDRKELKLQLLVIDMRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ +WL N+P V TK D K+ KG+ D+++K +I+E P +M
Sbjct: 122 DDVLMYHWLKHYNVPTCIVCTKAD--KIPKGKW-DKHVK----VIKETLEADPRDSLVMF 174
Query: 196 SSVTGLGRDEL 206
SS TGLGR++L
Sbjct: 175 SSETGLGREKL 185
>gi|417963797|ref|ZP_12605665.1| Putative GTP-binding protein engB, partial [Candidatus Arthromitus
sp. SFB-3]
gi|380331767|gb|EIA22745.1| Putative GTP-binding protein engB, partial [Candidatus Arthromitus
sp. SFB-3]
Length = 180
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 8/186 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + +F+KS+ KD P D E AI+GRSNVGKSSLIN+L+++K +A S PGKT+ +
Sbjct: 3 IYDSKFIKSAVSCKDFPNDGLKEIAIVGRSNVGKSSLINSLLQRKRIAKVSSTPGKTRTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N S+Y+VDLPGYG+AK R W + YF NR + V+LLID+ P +
Sbjct: 63 NFFLINNSFYLVDLPGYGYAKVSKSERDSWKYIAESYFNNRVYIDRVILLIDSRHDPFES 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ NW+ N + + TK DK+ ++ ++ + K +Q + N + SS+
Sbjct: 123 DVTMYNWINSLNYKIDIIATKSDKLSYSQIKKNEHIFK--RQFSKSN------ILFYSSL 174
Query: 199 TGLGRD 204
RD
Sbjct: 175 KNYNRD 180
>gi|170016866|ref|YP_001727785.1| ribosome biogenesis GTP-binding protein YsxC [Leuconostoc citreum
KM20]
gi|414597013|ref|ZP_11446584.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE E16]
gi|421876598|ref|ZP_16308154.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C10]
gi|421878287|ref|ZP_16309769.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C11]
gi|238688953|sp|B1MXT9.1|ENGB_LEUCK RecName: Full=Probable GTP-binding protein EngB
gi|169803723|gb|ACA82341.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|372557675|emb|CCF24274.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C10]
gi|390447901|emb|CCF25889.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE C11]
gi|390482127|emb|CCF28645.1| Probable GTP-binding protein EngB [Leuconostoc citreum LBAE E16]
Length = 194
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VNNVEMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + + Y +R+ L GV+ L+DA P +
Sbjct: 63 NFYDVENQLYFVDVPGYGYAKVSKKQREAFGNMIEEYITSRKQLRGVISLVDARHDPSED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ +K + + NIK +QL ++ ++ SS
Sbjct: 123 DVAMYEWLHYYNIPILVVATKSDKISKSKFNKYENNIK--KQLGFDS--SASDFLFFSSE 178
Query: 199 TGLGRDEL 206
T GRD +
Sbjct: 179 TKYGRDSV 186
>gi|312143238|ref|YP_003994684.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
gi|311903889|gb|ADQ14330.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium
hydrogeniformans]
Length = 200
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +F KS + ++CP+ +PE A GRSNVGKSSLIN + ++K+LA TS PG+TQ
Sbjct: 2 KLSNAKFYKSVYKYEECPRLQQPEVAFSGRSNVGKSSLINRITKRKKLARTSNTPGRTQS 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F ++ +Y+VDLPGYGFA P + DW+ Y RE+L+G++ +ID+ P K
Sbjct: 62 LNYFNIDDKFYLVDLPGYGFANVPKKVKDDWAELIDSYLNYRENLIGIVQIIDSRHKPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHHPPWIMTS 196
D WL + + TK DK+ +E K + +++E N +I S
Sbjct: 122 DDKMMVEWLKASGLSFLIAATKVDKIS------NNERAKQKKIILKELNLDKEDNFIFFS 175
Query: 197 SVTGLGRDELLLHMSQL 213
+ TG G E+ ++ L
Sbjct: 176 AETGEGSKEIYNYLESL 192
>gi|347542089|ref|YP_004856725.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985124|dbj|BAK80799.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 188
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 8/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + +F+KS +++D P D E AI+GRSNVGKSSLIN+++++K LA S PGKT+ +
Sbjct: 3 IYDSKFIKSVVKSEDFPNDGLKEIAIVGRSNVGKSSLINSMLQRKRLAKVSSTPGKTRTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y+VDLPGYG+AK R W + YF NR + V+LLID+ P +
Sbjct: 63 NFFLINNLFYLVDLPGYGYAKLSKSERNSWKYMVESYFDNRACIDKVILLIDSRHAPFES 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ L + TK DK+ ++ ++ ++ K +Q R N + SS+
Sbjct: 123 DIVMYDWINSLKYKLDIIATKSDKLSYSQIKKNEQVFK--KQFSRSN------ILFYSSL 174
Query: 199 TGLGRDELL 207
R+ELL
Sbjct: 175 KNYNRNELL 183
>gi|392411031|ref|YP_006447638.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfomonile
tiedjei DSM 6799]
gi|390624167|gb|AFM25374.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfomonile
tiedjei DSM 6799]
Length = 192
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 7/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EF +++ KD P + E A GRSNVGKSS+IN L+ ++ L TSK PG T+
Sbjct: 2 KVSTAEFFRAAEEKKDYPPGEYSELAFAGRSNVGKSSMINTLLGRRNLVRTSKTPGHTRK 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N Y VDLPGYGFAK P R W + Y R L GV++++DA PP +
Sbjct: 62 LNFYLINGRLYFVDLPGYGFAKVPLEVREKWRPMVETYLTGRRQLAGVVVIVDARRPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L + PL TK DK+ + I+S Q+ P + S+
Sbjct: 122 SDMSLIEFLQAYDKPLIVAATKADKLTRNQMAEQKRTIRSAIQM-------DVPIVFFSA 174
Query: 198 VTGLGRDEL 206
+ GLG++EL
Sbjct: 175 LNGLGKNEL 183
>gi|227877366|ref|ZP_03995437.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256842925|ref|ZP_05548413.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256848700|ref|ZP_05554134.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|262045892|ref|ZP_06018856.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|293381820|ref|ZP_06627792.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|312978252|ref|ZP_07789995.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|423317764|ref|ZP_17295661.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
gi|423321102|ref|ZP_17298974.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|227863034|gb|EEJ70482.1| GTPase [Lactobacillus crispatus JV-V01]
gi|256614345|gb|EEU19546.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 125-2-CHN]
gi|256714239|gb|EEU29226.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US]
gi|260573851|gb|EEX30407.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus MV-3A-US]
gi|290921606|gb|EFD98636.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus 214-1]
gi|310894771|gb|EFQ43842.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus CTV-05]
gi|405596425|gb|EKB69761.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB077-07]
gi|405597823|gb|EKB71073.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
crispatus FB049-03]
Length = 196
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ + S+ R PKD+ PE A+ GRSNVGKSSLIN L+++K LA TS +PGKTQ +
Sbjct: 3 IESSSYAVSAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN+ +Y+VD+PGYG+AK R ++ + Y R +L G+++L+D+ P K
Sbjct: 63 NFYKVNEKFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ ++ NIP+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYDYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKLNL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVTELSNWIEK 192
>gi|340357280|ref|ZP_08679900.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
gi|339617915|gb|EGQ22524.1| ribosome biogenesis GTP-binding protein YsxC [Sporosarcina
newyorkensis 2681]
Length = 193
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE + S+ + + P + PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVHNVEMIMSAVKPEQYPTEGYPEFALAGRSNVGKSSFINKMIGRKSLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y RE L VLL++D PP +
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKTEREAWGKMIERYITAREELRAVLLIVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D ++L N+P V TK DK+ P + ++++R N H P ++
Sbjct: 122 DDCMMYDFLAHYNVPTIVVATKADKI-------PKGKWEKHKKVVRTTLNMEKHHPLLLF 174
Query: 196 SSVTGLGRDE 205
SS G+G +E
Sbjct: 175 SSEKGMGIEE 184
>gi|134300397|ref|YP_001113893.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum
reducens MI-1]
gi|172044336|sp|A4J7L5.1|ENGB_DESRM RecName: Full=Probable GTP-binding protein EngB
gi|134053097|gb|ABO51068.1| small GTP-binding protein [Desulfotomaculum reducens MI-1]
Length = 205
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ P + PE A +GRSNVGKSSLIN +V +K LA TS PG+TQL
Sbjct: 2 KIVAAEFVTSAVNPGGYPPGNLPEVAFVGRSNVGKSSLINKVVNRKGLAKTSSTPGRTQL 61
Query: 78 INHFLVNKSWYI-VDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
IN F +N ++ VDLPGYG+AK P R+ W +GY RE L GV+LLID+ P
Sbjct: 62 INFFNINNDQFLMVDLPGYGYAKVPTDVRIKWGKMIEGYLKERECLKGVVLLIDSRHTPT 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D WL ++P V TK DK+ + + IK L +E+ I S
Sbjct: 122 AQDKQMYEWLQYYHVPTVVVATKVDKLSNNQWAKQQAVIKKSLPLSKEH-----QLISFS 176
Query: 197 SVTGLGRDELL 207
+ TG G+++LL
Sbjct: 177 AETGRGKEKLL 187
>gi|326693799|ref|ZP_08230804.1| GTP-binding protein YsxC [Leuconostoc argentinum KCTC 3773]
Length = 196
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGQMIEEYITSRKQLRGVISLVDARHDPSAD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ +K + + NIK E+ ++ SS
Sbjct: 123 DIAMYEWLHYYNIPILVVATKADKISKSKFNKYEANIKRTLGFDDED----SDFLFFSSE 178
Query: 199 TGLGRDEL 206
T G+D++
Sbjct: 179 TKYGKDQV 186
>gi|56964398|ref|YP_176129.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus clausii
KSM-K16]
gi|81822069|sp|Q5WEP2.1|ENGB_BACSK RecName: Full=Probable GTP-binding protein EngB
gi|56910641|dbj|BAD65168.1| GTP-binding protein [Bacillus clausii KSM-K16]
Length = 197
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + +A+ PK+ PE A+ GRSNVGKSS IN ++ +K LA TS +PGKTQ
Sbjct: 2 KVTKAELAHVAVKAEQYPKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+ Y VD+PGYG+AK R W + Y RE L VL L+D P +
Sbjct: 62 LNFYEINERLYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D NW+ IP+ V TK D K+ KG+ + + L +E P + SS
Sbjct: 122 DDQLMYNWMKHYGIPVILVATKAD--KIPKGKWQKQLTAIAKTLDKEA---SDPLLFFSS 176
Query: 198 VTGLGRDE 205
TGLG+DE
Sbjct: 177 ATGLGKDE 184
>gi|403515255|ref|YP_006656075.1| GTP-binding protein YsxC [Lactobacillus helveticus R0052]
gi|403080693|gb|AFR22271.1| GTP-binding protein YsxC [Lactobacillus helveticus R0052]
Length = 196
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ PE A+ GRSNVGKSSLIN ++ +K LA TS +PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTILNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VD+PGYG+A+ R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ N+P+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNIDL---NY-DHVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVAELGNWIEE 192
>gi|381182038|ref|ZP_09890862.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
gi|380318071|gb|EIA21366.1| GTP-binding protein YsxC [Listeriaceae bacterium TTU M1-001]
Length = 194
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 107/196 (54%), Gaps = 9/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ + P D PEFA+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELVISAVWQEQYPADSLPEFALAGRSNVGKSSFINKMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ Y VD+PGYGFAK R W + Y +RE L V+ +ID P
Sbjct: 63 NFYKIEETLYFVDVPGYGFAKVSKREREKWGEMIETYITSREQLRAVIQIIDLRHKPTND 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ +L IP+ V TK DK+ P + +++RE ++ ++M S
Sbjct: 123 DVMMYEFLKYYQIPVIIVATKADKI-------PRSKWQKHAKIVRETLDFDKEDDFVMFS 175
Query: 197 SVTGLGRDELLLHMSQ 212
S TG+G++E + Q
Sbjct: 176 SETGMGKEEAWEFIKQ 191
>gi|340385210|ref|XP_003391103.1| PREDICTED: probable GTP-binding protein EngB-like [Amphimedon
queenslandica]
Length = 215
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 109/209 (52%), Gaps = 20/209 (9%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ R +D P D+ E A GRSN GKSSLINAL R+K LA TS+ PG+T+LIN
Sbjct: 5 RQATFLVSASRVRDFPADEGLEVAFAGRSNAGKSSLINALCRRKALARTSRTPGRTRLIN 64
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V S +VDLPGYG+AKAP W + Y R SL G++LL+D P +D
Sbjct: 65 FFSVADSLRLVDLPGYGYAKAPRSMSEAWGRLVEEYLQGRRSLAGLVLLMDIRHPLTALD 124
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH----------- 188
N IPL V +K DK+ +R IK + + + +
Sbjct: 125 RIMLNGCRLGGIPLLVVLSKADKL---ASKRRIMAIKEVRSALGDLFAQDSAKERAVPDA 181
Query: 189 -----HPPWIMTSSVTG-LGRDELLLHMS 211
PP +M S+ +G +EL+LH+S
Sbjct: 182 MGEGRSPPKVMAHSLPAKIGYEELVLHLS 210
>gi|345023379|ref|ZP_08786992.1| GTP-binding protein YsxC [Ornithinibacillus scapharcae TW25]
Length = 193
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ K P D PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVTNAEIVISAVSQKQYPNDQLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++Y VD+PGYG+AK R W + YF R++L VLL+ D P +
Sbjct: 62 LNFYRINDAFYFVDVPGYGYAKVSKTEREKWGKMMEEYFQTRQTLKAVLLITDIRHEPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +P+ + TK D K+ KG+R ++ L + P+ SS
Sbjct: 122 DDIQMYEFLKHFELPVVVIATKLD--KIPKGKRAQHIKRTINTLQMDKGDLILPF---SS 176
Query: 198 VTGLGRDE 205
TG G+DE
Sbjct: 177 ETGEGKDE 184
>gi|392427520|ref|YP_006468514.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
gi|391357483|gb|AFM43182.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus acidiphilus SJ4]
Length = 196
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 86/145 (59%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ E+V S+ + + P D PE A+ GRSNVGKSSLIN + +K LA T PGKTQ +
Sbjct: 4 IRKAEYVASAVKYEQYPVGDLPEIAMAGRSNVGKSSLINRFLSRKNLARTGNTPGKTQTL 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +W++VDLPGYG+AK W + YF RESL V+ ++D P +
Sbjct: 64 NFYRVNDAWFLVDLPGYGYAKVAKSVNAQWGGMMETYFKKRESLRAVIQIVDIRHAPSRE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM 163
D++ WL IP V TK DK+
Sbjct: 124 DVEMQQWLRMRQIPTMVVATKADKI 148
>gi|339498009|ref|ZP_08658985.1| GTP-binding protein YsxC [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 197
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 107/199 (53%), Gaps = 8/199 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSATQYPTDGKPEIALVGRSNVGKSSLTNTLINRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGHMIEEYITSRKQLRGVISLVDARHDPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ ++ + + NIK E+ + SS
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRSRFNKYESNIKRTLGFDEED----SDFQFFSSE 178
Query: 199 TGLGRDE----LLLHMSQL 213
T G+DE + H++Q+
Sbjct: 179 TKYGKDEVWQWIETHLNQM 197
>gi|451818372|ref|YP_007454573.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784351|gb|AGF55319.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 198
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ +FV S+ + P D+R E A +GRSNVGKSS+INAL + +LA S+ PGKT+L
Sbjct: 2 RIKKSDFVTSAVKKNQYPIDNRAEIAFVGRSNVGKSSIINALTNRNKLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F++N +Y+VDLPGYG+AK + W + Y +RE L V+LL+D+ P
Sbjct: 62 INFFIINDDFYLVDLPGYGYAKVSKSEKESWGKTIETYLTSREQLKRVVLLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ + V TK DK+ + ++ ++ IK +L E+ + SS
Sbjct: 122 DDILMYKWIKHFGYDVIIVATKSDKLSRNELKKNEKIIKETLELTSEDKLY-----FFSS 176
Query: 198 VTGLGRDELL 207
V+ GRD+L+
Sbjct: 177 VSKDGRDQLI 186
>gi|18310371|ref|NP_562305.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens str. 13]
gi|110800363|ref|YP_696084.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|168207810|ref|ZP_02633815.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|168215329|ref|ZP_02640954.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|168217820|ref|ZP_02643445.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|169342290|ref|ZP_02863368.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|422346055|ref|ZP_16426969.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|422874313|ref|ZP_16920798.1| GTP-binding protein YsxC [Clostridium perfringens F262]
gi|24418379|sp|Q8XKK5.1|ENGB_CLOPE RecName: Full=Probable GTP-binding protein EngB
gi|119369185|sp|Q0TQK6.1|ENGB_CLOP1 RecName: Full=Probable GTP-binding protein EngB
gi|18145051|dbj|BAB81095.1| probable GTP binding protein [Clostridium perfringens str. 13]
gi|110675010|gb|ABG83997.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens ATCC 13124]
gi|169299617|gb|EDS81676.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|170660856|gb|EDT13539.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|170713286|gb|EDT25468.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|182380168|gb|EDT77647.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|373226677|gb|EHP48999.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens WAL-14572]
gi|380304790|gb|EIA17076.1| GTP-binding protein YsxC [Clostridium perfringens F262]
Length = 197
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ + + P D+ PE A +GRSNVGKSS+IN+L ++ LA S+ PGKT+L
Sbjct: 2 KIKSSEFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+NK +Y+VDLPGYG+AK + W + + Y LNR L V+LL+D P
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIMT 195
D+ W+ + + TK DK+ + I ++LI+E P
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKI-------SNNQIGKSEKLIKETLGLPKDHKLKFF 174
Query: 196 SSVTGLGRDELLLHM 210
SS+ G+DEL+ ++
Sbjct: 175 SSLNKKGKDELVDYL 189
>gi|431586020|ref|ZP_19520535.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1861]
gi|431739973|ref|ZP_19528892.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2039]
gi|430593198|gb|ELB31184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1861]
gi|430604100|gb|ELB41600.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2039]
Length = 195
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVSPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|120602468|ref|YP_966868.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
vulgaris DP4]
gi|166225952|sp|A1VDC5.1|ENGB_DESVV RecName: Full=Probable GTP-binding protein EngB
gi|120562697|gb|ABM28441.1| GTP-binding protein, HSR1-related protein [Desulfovibrio vulgaris
DP4]
Length = 216
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 38 DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVN-KSWYIVDLPGYG 96
D P+ A+ GRSNVGKSSL+NAL R+K+LA TS PGKT+ +N++ V + +YIVDLPGYG
Sbjct: 21 DAPQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVNYYRVEPEGFYIVDLPGYG 80
Query: 97 FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFV 156
+A+ R W+ + Y ++ +SL G+ +L+D + PQ++D+D ++ NNIPL V
Sbjct: 81 YAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLDCRLDPQRLDVDLTSYARANNIPLLPV 140
Query: 157 FTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
TK DK K+ R + K + L+ P ++T+S+TGLG +L + L
Sbjct: 141 LTKGDKCKL---RERSDRQKQWAVLLGGRKP-----LVTASMTGLGIADLWRELRAL 189
>gi|153955957|ref|YP_001396722.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium kluyveri
DSM 555]
gi|189037173|sp|A5N2K5.1|ENGB_CLOK5 RecName: Full=Probable GTP-binding protein EngB
gi|146348815|gb|EDK35351.1| EngB [Clostridium kluyveri DSM 555]
Length = 197
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 7/201 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ PKD R E A +GRSNVGKSSLINAL +K+L S PGKT+L
Sbjct: 2 EIKQAEFIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y VDLPGYG+AK + W + Y RE L V+LL+D P
Sbjct: 62 INFFLINNEFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-S 196
D+ WL N V TK DK+ ++ + N+K + ++ P I+T S
Sbjct: 122 DDITMYKWLKYYNYNTIIVATKVDKVSKSQLFK---NLKIIKDTLK---PETGDEILTFS 175
Query: 197 SVTGLGRDELLLHMSQLRNYW 217
S+ G++E L + + +++
Sbjct: 176 SLNKQGKEEFLKVLESVIDFY 196
>gi|194334829|ref|YP_002016689.1| ribosome biogenesis GTP-binding protein YsxC [Prosthecochloris
aestuarii DSM 271]
gi|238693315|sp|B4S596.1|ENGB_PROA2 RecName: Full=Probable GTP-binding protein EngB
gi|194312647|gb|ACF47042.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 192
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 105/199 (52%), Gaps = 10/199 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I F KS K P PE +GRSNVGKS+L+N L +K LA TS PGKTQL
Sbjct: 2 KIDSATFYKSCSELKGLPVSSLPEIVFVGRSNVGKSTLLNTLTGRKALAKTSSTPGKTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+F +N Y VDLPGYG+AK R +W GY RE + V+LLID+ P +
Sbjct: 62 INYFTINDRLYFVDLPGYGYAKVAKGQRYEWGRLLGGYISEREEISLVVLLIDSRHPDME 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D +L P V TK DK+K + R + +KSF ++ + + S+
Sbjct: 122 SDQQMIEFLEYYQRPYGIVLTKYDKLKQKEKSRVRKALKSFS--LKTKF-----IVNYSA 174
Query: 198 VTGLGRDELLLHMSQLRNY 216
++G G++ LL QL NY
Sbjct: 175 LSGEGKESLL---EQLENY 190
>gi|227551677|ref|ZP_03981726.1| GTPase [Enterococcus faecium TX1330]
gi|257895723|ref|ZP_05675376.1| GTP-binding protein [Enterococcus faecium Com12]
gi|293377668|ref|ZP_06623857.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
PC4.1]
gi|293571861|ref|ZP_06682877.1| GTP-binding protein [Enterococcus faecium E980]
gi|424762816|ref|ZP_18190300.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX1337RF]
gi|431106134|ref|ZP_19497291.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1613]
gi|431737543|ref|ZP_19526496.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1972]
gi|431752043|ref|ZP_19540729.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2620]
gi|431756857|ref|ZP_19545489.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3083]
gi|431762084|ref|ZP_19550646.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3548]
gi|227179240|gb|EEI60212.1| GTPase [Enterococcus faecium TX1330]
gi|257832288|gb|EEV58709.1| GTP-binding protein [Enterococcus faecium Com12]
gi|291608115|gb|EFF37421.1| GTP-binding protein [Enterococcus faecium E980]
gi|292643668|gb|EFF61789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
PC4.1]
gi|402423921|gb|EJV56120.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX1337RF]
gi|430569666|gb|ELB08656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1613]
gi|430598630|gb|ELB36365.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1972]
gi|430614652|gb|ELB51632.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2620]
gi|430620711|gb|ELB57513.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3083]
gi|430624776|gb|ELB61426.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3548]
Length = 195
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|219856299|ref|YP_002473421.1| hypothetical protein CKR_2956 [Clostridium kluyveri NBRC 12016]
gi|219570023|dbj|BAH08007.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 201
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 7/201 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ PKD R E A +GRSNVGKSSLINAL +K+L S PGKT+L
Sbjct: 6 EIKQAEFIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRL 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y VDLPGYG+AK + W + Y RE L V+LL+D P
Sbjct: 66 INFFLINNEFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTN 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-S 196
D+ WL N V TK DK+ ++ + N+K + ++ P I+T S
Sbjct: 126 DDITMYKWLKYYNYNTIIVATKVDKVSKSQLFK---NLKIIKDTLK---PETGDEILTFS 179
Query: 197 SVTGLGRDELLLHMSQLRNYW 217
S+ G++E L + + +++
Sbjct: 180 SLNKQGKEEFLKVLESVIDFY 200
>gi|46580074|ref|YP_010882.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
vulgaris str. Hildenborough]
gi|387153483|ref|YP_005702419.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
vulgaris RCH1]
gi|81566751|sp|Q72BH2.1|ENGB_DESVH RecName: Full=Probable GTP-binding protein EngB
gi|46449490|gb|AAS96141.1| GTP-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311233927|gb|ADP86781.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
vulgaris RCH1]
Length = 216
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 38 DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVN-KSWYIVDLPGYG 96
D P+ A+ GRSNVGKSSL+NAL R+K+LA TS PGKT+ +N++ V + +YIVDLPGYG
Sbjct: 21 DAPQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVNYYRVEPEGFYIVDLPGYG 80
Query: 97 FAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFV 156
+A+ R W+ + Y ++ +SL G+ +L+D + PQ++D+D ++ NNIPL V
Sbjct: 81 YAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLDCRLDPQRLDVDLTSYARANNIPLLPV 140
Query: 157 FTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
TK DK K+ R + K + L+ P ++T+S+TGLG +L + L
Sbjct: 141 LTKGDKCKL---RERSDRQKQWAVLLGGRKP-----LVTASMTGLGIADLWRELRAL 189
>gi|110802133|ref|YP_698700.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
gi|119369186|sp|Q0ST57.1|ENGB_CLOPS RecName: Full=Probable GTP-binding protein EngB
gi|110682634|gb|ABG86004.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
perfringens SM101]
Length = 197
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ + + P D+ PE A +GRSNVGKSS+IN+L ++ LA S+ PGKT+L
Sbjct: 2 KIKSSEFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+NK +Y+VDLPGYG+AK + W + + Y LNR L V+LL+D P
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIMT 195
D+ W+ + + TK DK+ + I ++LI+E P
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKI-------SNNQIGKSEKLIKETLGLPKDYKLKFF 174
Query: 196 SSVTGLGRDELLLHM 210
SS+ G+DEL+ ++
Sbjct: 175 SSLNKKGKDELVDYL 189
>gi|403237692|ref|ZP_10916278.1| GTP-binding protein YsxC [Bacillus sp. 10403023]
Length = 198
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + V S+ + + P+ D PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTSADIVISAVKPEQYPEGDLPEFALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F++N+ Y VD+PGYG+AK R W + Y RE L V+L++D PP
Sbjct: 62 LNFFIINELLYFVDVPGYGYAKVSKKEREAWGKMIETYLTTREQLKAVVLIVDLRHPPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ ++ +P+ + TK D K+ KG+ D+++K ++RE P I
Sbjct: 122 DDVLMYDFAKHYELPVVVIATKAD--KIPKGKW-DKHVK----VVRETLEIEPGDHLIKF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|16800661|ref|NP_470929.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua
Clip11262]
gi|422413049|ref|ZP_16490008.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
S4-378]
gi|24418385|sp|Q92BF6.1|ENGB_LISIN RecName: Full=Probable GTP-binding protein EngB
gi|16414080|emb|CAC96824.1| lin1593 [Listeria innocua Clip11262]
gi|313618752|gb|EFR90657.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
S4-378]
Length = 194
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELVISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYDIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|257884403|ref|ZP_05664056.1| GTP-binding protein [Enterococcus faecium 1,231,501]
gi|257820241|gb|EEV47389.1| GTP-binding protein [Enterococcus faecium 1,231,501]
Length = 195
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKYESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|257887187|ref|ZP_05666840.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|431033025|ref|ZP_19490871.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1590]
gi|257823241|gb|EEV50173.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|430564126|gb|ELB03310.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1590]
Length = 195
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIDQ 191
>gi|260101783|ref|ZP_05752020.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DSM 20075]
gi|260084427|gb|EEW68547.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DSM 20075]
Length = 196
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VD+PGYG+A+ R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ N+P+ V TK DK+K ++ + +K L NY + + SSV
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKAMSRLKKNIDL---NY-DYVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVAELGNWIEE 192
>gi|392957358|ref|ZP_10322882.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
gi|391876765|gb|EIT85361.1| GTP-binding protein YsxC [Bacillus macauensis ZFHKF-1]
Length = 195
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE + GRSNVGKSS IN ++ +K LA TS +PGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPVDQLPEIGLAGRSNVGKSSFINKMIARKNLARTSSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N Y VD+PGYGFAK R W + Y + R L V+LL+D P
Sbjct: 62 LNFYIINDQLYFVDVPGYGFAKVSKSEREAWGKMIERYIMERPQLKAVVLLVDLRHAPSV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ WL IP+ V TKCDK+ P + ++++E P P ++
Sbjct: 122 DDVLMYEWLKHYEIPVIIVATKCDKI-------PKGKWQKHLKVVKETLKKKPEDPLLLF 174
Query: 196 SSVTGLGRD----ELLLHMSQ 212
SS TG G+D ++ HM +
Sbjct: 175 SSETGYGKDAAWGSIIEHMKR 195
>gi|317051090|ref|YP_004112206.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum
indicum S5]
gi|316946174|gb|ADU65650.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum
indicum S5]
Length = 204
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 90/143 (62%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+V+F+ S+ CP DRPE LGRSNVGKSSLINA+ ++ +A+TSK PG+T+LIN+
Sbjct: 9 QVQFITSAPSLAKCPVPDRPEIVFLGRSNVGKSSLINAVTGRRNIAITSKTPGRTRLINY 68
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F VN Y VDLPGYGFA+ P R +W+ Y RE++ ++++DA QK DL
Sbjct: 69 FDVNGDLYCVDLPGYGFARVPTGMRDEWNRSLYEYLERRENIALAIMIVDARHEAQKNDL 128
Query: 141 DCANWLGRNNIPLTFVFTKCDKM 163
+ L +P+ V TK DK+
Sbjct: 129 RMFSLLQELEVPVFIVATKADKL 151
>gi|399516026|ref|ZP_10757650.1| GTP-binding protein EngB [Leuconostoc pseudomesenteroides 4882]
gi|398649120|emb|CCJ65677.1| GTP-binding protein EngB [Leuconostoc pseudomesenteroides 4882]
Length = 197
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSATQYPTDGKPEIALVGRSNVGKSSLTNTLINRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREAFGHMIEEYITSRKQLRGVISLVDARHDPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ ++ + + NIK E+ + SS
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRSRFNKYESNIKRTLGFDEED----SDFQFFSSE 178
Query: 199 TGLGRDEL 206
T G+DE+
Sbjct: 179 TKYGKDEV 186
>gi|407718594|ref|YP_006795999.1| GTP-binding protein YsxC [Leuconostoc carnosum JB16]
gi|407242350|gb|AFT82000.1| GTP-binding protein YsxC [Leuconostoc carnosum JB16]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y +R+ L GV+ L+DA P +
Sbjct: 63 NFYNVEDQLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHDPSED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ +K + + NIK E+ + SS
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSKFNKYEANIKRILGFDDED----SDFQFFSSE 178
Query: 199 TGLGRDEL 206
T G+D++
Sbjct: 179 TKYGKDQV 186
>gi|422416061|ref|ZP_16493018.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
J1-023]
gi|313623624|gb|EFR93787.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL
J1-023]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELVISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYEIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|310657904|ref|YP_003935625.1| GTP-binding protein [[Clostridium] sticklandii]
gi|308824682|emb|CBH20720.1| GTP-binding protein [[Clostridium] sticklandii]
Length = 202
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 14/197 (7%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K +E V S+ P D+ PE A +GRSNVGKSS IN L+ ++ LA S+ PGKT+
Sbjct: 2 KLKSIELVISAMSKTQYPHDELPEVAFVGRSNVGKSSAINTLLNRRSLARVSQNPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + +N+ +Y VDLPGYG+AK R W + + YF N + L + LL+D P++
Sbjct: 62 INFYKINEEFYFVDLPGYGYAKTAKTERQHWGTVMQEYFENSQDLRHIFLLLDIRHEPKE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQ---LIRENYPHHPPWIM 194
D+ + NIP+T + TK D K+++G +FQ+ ++R+ +H I+
Sbjct: 122 DDILMYKYAVHYNIPVTIIATKSD--KISRG--------AFQKTFSMMRKKLDYHGEKIL 171
Query: 195 -TSSVTGLGRDELLLHM 210
SS+ G+DE+ H+
Sbjct: 172 PISSLKKTGKDEIWNHI 188
>gi|423100640|ref|ZP_17088347.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua ATCC
33091]
gi|370792864|gb|EHN60707.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua ATCC
33091]
Length = 202
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 11 VNNVELVISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 70
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 71 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 130
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 131 DRMMYEFLKYYDIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 183
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 184 SETKMGKDE 192
>gi|145219093|ref|YP_001129802.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium
phaeovibrioides DSM 265]
gi|189037185|sp|A4SCU1.1|ENGB_PROVI RecName: Full=Probable GTP-binding protein EngB
gi|145205257|gb|ABP36300.1| GTP-binding protein, HSR1-related protein [Chlorobium
phaeovibrioides DSM 265]
Length = 191
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 111/196 (56%), Gaps = 9/196 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I FV+S D P++ PE GRSNVGKSSL+N+L +K LA TS PGKT+L
Sbjct: 2 KITNAAFVRSVSDLSDLPEESFPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+FL+N + Y VD+PGYG+A + W GY +R ++ V+LL+D+ P K
Sbjct: 62 INYFLLNDNLYFVDIPGYGYAAVSHAEKDAWGRLLAGYVGDRAAIALVVLLLDSRHPAMK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-S 196
D D ++L ++ P V TK DK+ + ++ + E+ + +I++ S
Sbjct: 122 SDRDMMDFLAYHDRPYGIVLTKDDKLT--------QKERTHAKRATESCAMNAGFIVSYS 173
Query: 197 SVTGLGRDELLLHMSQ 212
SV+G G++ELL H +
Sbjct: 174 SVSGKGKNELLDHFDR 189
>gi|392989333|ref|YP_006487926.1| GTP-binding protein YsxC [Enterococcus hirae ATCC 9790]
gi|392336753|gb|AFM71035.1| GTP-binding protein YsxC [Enterococcus hirae ATCC 9790]
Length = 195
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ K P+ D PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIVISAVAPKQYPESDLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYITTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ ++ +I+ SS
Sbjct: 122 EDIQMYEFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDNNDQFILFSS 176
Query: 198 VTGLGRDE 205
VT G++E
Sbjct: 177 VTKQGKEE 184
>gi|319790441|ref|YP_004152074.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio
ammonificans HB-1]
gi|317114943|gb|ADU97433.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio
ammonificans HB-1]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K+V+ K+ + P+ E A +GRSNVGKSSL+NA+ +LA S +PGKT+
Sbjct: 2 KVKKVQLYKTVYTPDELPQTPYNEVAFVGRSNVGKSSLLNAVANNFKLAKVSSQPGKTRS 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +LVN +++VDLPGYGFAK P + W + Y R+ L GV LL+D+ V P +
Sbjct: 62 INFYLVNDRFFLVDLPGYGFAKVPLKEQQRWRELIESYLKGRDRLKGVFLLVDSKVGPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
DL WL IP T V TK D++K ++ R +E IK
Sbjct: 122 KDLQMKEWLDFFGIPYTVVATKVDRLKASQRRNLEERIK 160
>gi|20807122|ref|NP_622293.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
tengcongensis MB4]
gi|254479256|ref|ZP_05092599.1| putative small GTP-binding protein domain protein
[Carboxydibrachium pacificum DSM 12653]
gi|24418374|sp|Q8RC22.1|ENGB_THETN RecName: Full=Probable GTP-binding protein EngB
gi|20515616|gb|AAM23897.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
gi|214034794|gb|EEB75525.1| putative small GTP-binding protein domain protein
[Carboxydibrachium pacificum DSM 12653]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EFV S+ PKD P+ AI+G+SNVGKS+LIN ++ +K LA S PGKT+
Sbjct: 2 KIKTAEFVGSAFNESQYPKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +LVN+++YIVDLPGYG+AK + W+ + + ++L LLLID P +
Sbjct: 62 INFYLVNRAFYIVDLPGYGYAKVSKEMKKQWAYNIETFLNTSKNLKHALLLIDIRREPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI-KSFQ 179
D NW N+P + V TK DK+ ++ + ENI +SF
Sbjct: 122 DDFMMVNWFSFKNLPFSVVLTKADKVNKSEANKAIENICRSFN 164
>gi|417007052|ref|ZP_11945261.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463]
gi|328468551|gb|EGF39553.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VD+PGYG+A+ R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ N+P+ V TK DK+K ++ + +K L NY + + SSV
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKAMSRLKKNIDL---NY-DYVTVLTFSSV 178
Query: 199 TGLGRDEL 206
T L EL
Sbjct: 179 TKLHVAEL 186
>gi|116618614|ref|YP_818985.1| ribosome biogenesis GTP-binding protein YsxC [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|227432007|ref|ZP_03914027.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|381336988|ref|YP_005174763.1| GTP-binding protein YsxC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122271186|sp|Q03W10.1|ENGB_LEUMM RecName: Full=Probable GTP-binding protein EngB
gi|116097461|gb|ABJ62612.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|227352292|gb|EEJ42498.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|356644954|gb|AET30797.1| GTP-binding protein YsxC [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 194
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + Y +R+ L GV+ L+DA P +
Sbjct: 63 NFYDVEDKLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEPSED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ K + + IK E+ + SS
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRGKFNKAESVIKKALGFDNED----SDFQFFSSE 178
Query: 199 TGLGRDEL 206
T G+DE+
Sbjct: 179 TKYGKDEV 186
>gi|88658079|ref|YP_507406.1| GTPase EngB [Ehrlichia chaffeensis str. Arkansas]
gi|119369195|sp|Q2GGM7.1|ENGB_EHRCR RecName: Full=Probable GTP-binding protein EngB
gi|88599536|gb|ABD45005.1| GTP-binding protein EngB [Ehrlichia chaffeensis str. Arkansas]
Length = 200
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 6/193 (3%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EF+ + K P PE AI GRSNVGKSSLINA+ K+ A TS KPG T+ IN
Sbjct: 9 KCEFMIGATHIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQINF 68
Query: 81 FLVNKSWYI-VDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
+L+NK + + VDLPGYG++KA T ++ + Y LN +L+ V+LLIDA V ++ID
Sbjct: 69 YLINKDFMVLVDLPGYGYSKADKTTINNYLCLMEYYLLNSRNLLKVILLIDAKVGFKEID 128
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
LD NWL + I V TK DK+ K D N+ + L + + P I TSS
Sbjct: 129 LDFINWLELHQIHYQLVLTKIDKI---KKEMLDVNVNYIKNLNLDFIMY--PIISTSSQC 183
Query: 200 GLGRDELLLHMSQ 212
G +EL+ ++Q
Sbjct: 184 KQGIEELIYEIAQ 196
>gi|398817591|ref|ZP_10576206.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. BC25]
gi|398029712|gb|EJL23161.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. BC25]
Length = 214
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EF+ S+ K P D E A++GRSNVGKSSL+N ++ +K LA S +PGKTQ
Sbjct: 2 KVTSSEFIISAVGPKQYPTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F VN+ Y VD PGYG+AK + W +GY NRE L V+ L+D P K
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNREELRFVIQLVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ +W + IP V TK D K+A+GR ++IR+ N I+
Sbjct: 122 DDVAMYDWCKQIGIPTVVVATKGD--KIARGRWLQHT-----KIIRQSLNLRGDDTIIVF 174
Query: 196 SSVTGLGRDEL 206
SS TG G+DEL
Sbjct: 175 SSETGQGKDEL 185
>gi|46907788|ref|YP_014177.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes serotype 4b str. F2365]
gi|47093095|ref|ZP_00230872.1| GTP-binding protein [Listeria monocytogenes str. 4b H7858]
gi|47096723|ref|ZP_00234308.1| GTP-binding protein [Listeria monocytogenes str. 1/2a F6854]
gi|217964295|ref|YP_002349973.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes HCC23]
gi|226224159|ref|YP_002758266.1| hypothetical GTP binding protein [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254824383|ref|ZP_05229384.1| GTPase EngB [Listeria monocytogenes FSL J1-194]
gi|254912232|ref|ZP_05262244.1| GTPase EngB [Listeria monocytogenes J2818]
gi|254931498|ref|ZP_05264857.1| GTPase EngB [Listeria monocytogenes HPB2262]
gi|254936560|ref|ZP_05268257.1| GTPase EngB [Listeria monocytogenes F6900]
gi|254993455|ref|ZP_05275645.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes FSL J2-064]
gi|255520161|ref|ZP_05387398.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes FSL J1-175]
gi|290893959|ref|ZP_06556935.1| GTPase EngB [Listeria monocytogenes FSL J2-071]
gi|300764776|ref|ZP_07074766.1| GTP-binding protein [Listeria monocytogenes FSL N1-017]
gi|386008329|ref|YP_005926607.1| GTPase/GTP-binding protein [Listeria monocytogenes L99]
gi|386026931|ref|YP_005947707.1| ribosome biogenesis GTP-binding protein [Listeria monocytogenes M7]
gi|386047210|ref|YP_005965542.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes J0161]
gi|386732296|ref|YP_006205792.1| GTP-binding protein YsxC [Listeria monocytogenes 07PF0776]
gi|404281118|ref|YP_006682016.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2755]
gi|404286982|ref|YP_006693568.1| GTPase/GTP-binding protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404407997|ref|YP_006690712.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2376]
gi|405749904|ref|YP_006673370.1| GTPase/GTP-binding protein [Listeria monocytogenes ATCC 19117]
gi|405752780|ref|YP_006676245.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2378]
gi|405755717|ref|YP_006679181.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2540]
gi|406704333|ref|YP_006754687.1| GTPase/GTP-binding protein [Listeria monocytogenes L312]
gi|417316096|ref|ZP_12102754.1| GTP-binding protein YsxC [Listeria monocytogenes J1816]
gi|424823320|ref|ZP_18248333.1| Putative GTP-binding protein engB [Listeria monocytogenes str.
Scott A]
gi|67460317|sp|Q71ZB0.1|ENGB_LISMF RecName: Full=Probable GTP-binding protein EngB
gi|254783204|sp|B8DHJ0.1|ENGB_LISMH RecName: Full=Probable GTP-binding protein EngB
gi|259645902|sp|C1KVK5.1|ENGB_LISMC RecName: Full=Probable GTP-binding protein EngB
gi|46881057|gb|AAT04354.1| GTP-binding protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47014907|gb|EAL05855.1| GTP-binding protein [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|47018535|gb|EAL09291.1| GTP-binding protein [Listeria monocytogenes serotype 4b str. H7858]
gi|217333565|gb|ACK39359.1| YsxC [Listeria monocytogenes HCC23]
gi|225876621|emb|CAS05330.1| Putative hypothetical GTP binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258609154|gb|EEW21762.1| GTPase EngB [Listeria monocytogenes F6900]
gi|290556497|gb|EFD90035.1| GTPase EngB [Listeria monocytogenes FSL J2-071]
gi|293583050|gb|EFF95082.1| GTPase EngB [Listeria monocytogenes HPB2262]
gi|293590207|gb|EFF98541.1| GTPase EngB [Listeria monocytogenes J2818]
gi|293593618|gb|EFG01379.1| GTPase EngB [Listeria monocytogenes FSL J1-194]
gi|300514452|gb|EFK41509.1| GTP-binding protein [Listeria monocytogenes FSL N1-017]
gi|307571139|emb|CAR84318.1| GTPase/GTP-binding protein [Listeria monocytogenes L99]
gi|328465593|gb|EGF36822.1| GTP-binding protein YsxC [Listeria monocytogenes J1816]
gi|332312000|gb|EGJ25095.1| Putative GTP-binding protein engB [Listeria monocytogenes str.
Scott A]
gi|336023512|gb|AEH92649.1| ribosome biogenesis GTP-binding protein [Listeria monocytogenes M7]
gi|345534201|gb|AEO03642.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes J0161]
gi|384391054|gb|AFH80124.1| GTP-binding protein YsxC [Listeria monocytogenes 07PF0776]
gi|404219104|emb|CBY70468.1| GTPase/GTP-binding protein [Listeria monocytogenes ATCC 19117]
gi|404221980|emb|CBY73343.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2378]
gi|404224917|emb|CBY76279.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2540]
gi|404227753|emb|CBY49158.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2755]
gi|404242146|emb|CBY63546.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2376]
gi|404245911|emb|CBY04136.1| GTPase/GTP-binding protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361363|emb|CBY67636.1| GTPase/GTP-binding protein [Listeria monocytogenes L312]
gi|441471252|emb|CCQ21007.1| Probable GTP-binding protein EngB [Listeria monocytogenes]
gi|441474382|emb|CCQ24136.1| Probable GTP-binding protein EngB [Listeria monocytogenes N53-1]
Length = 194
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYDIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|440781229|ref|ZP_20959571.1| GTP-binding protein YsxC [Clostridium pasteurianum DSM 525]
gi|440220834|gb|ELP60040.1| GTP-binding protein YsxC [Clostridium pasteurianum DSM 525]
Length = 194
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + + PKD PE A +GRSNVGKSS+INAL +K+L S PGKT+L
Sbjct: 2 EIKQAEFIISAVKREQYPKDQLPEIAFVGRSNVGKSSIINALTNRKKLVKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N + Y VDLPGYG+AK + DW + Y NR L V+LL+D P +
Sbjct: 62 INFFLINDNSYFVDLPGYGYAKISKEQKKDWGKIIETYLKNRNPLKKVVLLLDCRRIPNE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ NW+ + TK DK+ ++ + + I+ +L + SS
Sbjct: 122 DDILMYNWIKHYGYNCMIISTKSDKLNRSELSKSENTIRKTLKL-----QENEKISFYSS 176
Query: 198 VTGLGRDELL 207
+ G +ELL
Sbjct: 177 LKKAGTEELL 186
>gi|403387719|ref|ZP_10929776.1| GTP-binding protein YsxC [Clostridium sp. JC122]
Length = 196
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + + P D+R EFA +GRSNVGKSSLIN L +K+L S PGKT+L
Sbjct: 2 EIKQSEFVISAVKPQQYPIDNRVEFAFVGRSNVGKSSLINTLTNRKKLVKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y VDLPGYG+AK + W + Y ++R L ++LL+D+ P
Sbjct: 62 INFFLINNEFYFVDLPGYGYAKVSKKEKDSWGKMMEKYLIDRPQLKKIVLLVDSRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D+ NW+ + V TK DK+ +E KS ++LIRE +
Sbjct: 122 DDVIMYNWVKHYGYNVIVVATKRDKL------TNNEAAKS-KKLIRETLKMDKEESIVFF 174
Query: 196 SSVTGLGRDELLLHMSQ 212
SS+ G++ LL +S+
Sbjct: 175 SSLKKEGKENLLEELSK 191
>gi|255024637|ref|ZP_05296623.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes FSL J1-208]
gi|422809639|ref|ZP_16858050.1| GTP-binding protein EngB [Listeria monocytogenes FSL J1-208]
gi|378753253|gb|EHY63838.1| GTP-binding protein EngB [Listeria monocytogenes FSL J1-208]
Length = 194
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYDIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|352517648|ref|YP_004886965.1| GTPase [Tetragenococcus halophilus NBRC 12172]
gi|348601755|dbj|BAK94801.1| GTPase [Tetragenococcus halophilus NBRC 12172]
Length = 193
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ K PK E A+ GRSNVGKSS IN L+ +K+LA TS KPG+TQ
Sbjct: 2 KVHAAEIVISAVSKKQYPKSALAEVALAGRSNVGKSSFINTLIDRKKLARTSSKPGRTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+ ++ VDLPGYG+AK R W YF NR+ L V+ LID P +
Sbjct: 62 INFYLIENKFHFVDLPGYGYAKVSKQERAKWGEMIDEYFANRKQLQAVVSLIDMRHDPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L N P+ V TK D K AK +R ++ I ++++ ++ + +++ S+
Sbjct: 122 GDIQMYDFLKYYNFPVIVVATKAD--KAAKNKR-EQQISRIKEIL--DFDENDRFVVFST 176
Query: 198 VTGLGRDE 205
VT G++E
Sbjct: 177 VTKEGKEE 184
>gi|295695317|ref|YP_003588555.1| ribosome biogenesis GTP-binding protein YsxC [Kyrpidia tusciae DSM
2912]
gi|295410919|gb|ADG05411.1| ribosome biogenesis GTP-binding protein YsxC [Kyrpidia tusciae DSM
2912]
Length = 199
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ E ++ PKD PEFA++GRSNVGKSSLIN L +K+LA TS PG+T+
Sbjct: 2 QVTEAILAGTAVSPDRFPKDGLPEFALVGRSNVGKSSLINRLAMRKKLAHTSNTPGRTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N +Y+VDLPGYG+A+ R+ W + + + +RESL GV+ +ID PP
Sbjct: 62 LNFYRINSRFYLVDLPGYGYAQVSKSERLRWGAMVENFLAHRESLAGVIHVIDLRHPPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D A WL +++ + V TK DK+ ++ ++ Q R ++ S+
Sbjct: 122 DDRLMAEWLRAHDLAVLVVATKADKIARSRWESHRRQAEATLQPSR--------CVVFSA 173
Query: 198 VTGLGRDEL 206
TG GRD++
Sbjct: 174 ETGAGRDQV 182
>gi|39998104|ref|NP_954055.1| GTP-binding protein YsxC [Geobacter sulfurreducens PCA]
gi|81831965|sp|Q748I9.1|ENGB_GEOSL RecName: Full=Probable GTP-binding protein EngB
gi|39985049|gb|AAR36405.1| GTPase EngB [Geobacter sulfurreducens PCA]
Length = 206
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFV S R + P D E A +GRSNVGKSSLIN LV +K L TS PG+TQLI
Sbjct: 4 ITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN S +VDLPGYGFA+ P + W + Y R L V+L++D P +
Sbjct: 64 NFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDE 173
D WL +IP+ V TKCD KV+K R +
Sbjct: 124 DRLMLQWLRAYDIPVLVVITKCD--KVSKNERAKQ 156
>gi|409913458|ref|YP_006891923.1| GTPase EngB [Geobacter sulfurreducens KN400]
gi|298507043|gb|ADI85766.1| GTPase EngB [Geobacter sulfurreducens KN400]
Length = 206
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 83/145 (57%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I EFV S R + P D E A +GRSNVGKSSLIN LV +K L TS PG+TQLI
Sbjct: 4 ITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLI 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN S +VDLPGYGFA+ P + W + Y R L V+L++D P +
Sbjct: 64 NFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM 163
D WL +IP+ V TKCDK+
Sbjct: 124 DRLMLQWLRAYDIPVLVVITKCDKV 148
>gi|163781961|ref|ZP_02176961.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
gi|159883181|gb|EDP76685.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1]
Length = 184
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 109/188 (57%), Gaps = 12/188 (6%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+VEF+KS+ D P D+PE +GRSNVGKSSLIN +V + +A SK+PG+T+ IN+
Sbjct: 2 KVEFLKST--TADFPPPDKPEVVFVGRSNVGKSSLIN-MVTGRNIARVSKEPGRTRTINY 58
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNR-ESLVGVLLLIDASVPPQKID 139
FL+N S Y+VD+PGYGFA+ P + W + YF R E++ V LLIDA QK+D
Sbjct: 59 FLLNDSVYLVDVPGYGFARVPKEEQDKWKRMMENYFKGRKENIRVVFLLIDAVAGVQKLD 118
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
WL +P V TK DK AK + +K ++L+ +M+S+
Sbjct: 119 RQMIEWLQFVGLPFVVVLTKTDK---AKQKELSRTLKQVKELV-----GSSAIVMSSARE 170
Query: 200 GLGRDELL 207
G G+ E+L
Sbjct: 171 GRGKKEIL 178
>gi|119475280|ref|ZP_01615633.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
gi|119451483|gb|EAW32716.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143]
Length = 202
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 84/149 (56%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
H ++ EF S+ + DCP DD E A GRSN GKSS IN L K +A TSK PG+T
Sbjct: 5 HIDFRQAEFRTSAAKLADCPSDDGCEVAFAGRSNAGKSSAINTLTDNKRMARTSKTPGRT 64
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
QL+N F V + +VDLPGYGFAK P + W Y RESL G++LL+D P
Sbjct: 65 QLLNFFDVGERQRLVDLPGYGFAKVPLAVKEKWQRHLGEYLRERESLAGLVLLMDCRHPL 124
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMK 164
Q+ D W +P+ + TK DK+K
Sbjct: 125 QEFDRMMLAWAEGCEMPVHILLTKADKLK 153
>gi|253575676|ref|ZP_04853012.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845014|gb|EES73026.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 214
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 110/201 (54%), Gaps = 12/201 (5%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF+ S+ P+D PE A+ GRSNVGKSSLIN ++ +K LA TS PGKTQ
Sbjct: 2 KVTKAEFIISAVGPNQYPEDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQH 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ VN Y VD+PGYG+AK R W + Y RE+L VL +ID PP K
Sbjct: 62 LNYYRVNDRLYFVDVPGYGYAKVSKSQREVWGKMIEKYLQERETLKLVLQIIDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D +WL +P+ V TK DK+ P + ++I+E P I+
Sbjct: 122 DDELMYDWLKAYELPVCVVATKADKV-------PKSRWQKHLKIIKEALVLRAGDPLILF 174
Query: 196 SSVTGLGRDELLLHMSQLRNY 216
S+ G+G+DEL +Q++ Y
Sbjct: 175 SAEEGIGKDEL---WAQIKRY 192
>gi|161507350|ref|YP_001577304.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
helveticus DPC 4571]
gi|172048268|sp|A8YUS5.1|ENGB_LACH4 RecName: Full=Probable GTP-binding protein EngB
gi|160348339|gb|ABX27013.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 196
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VD+PGYG+A+ R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ N+P+ V TK DK+K ++ + +K L NY + + SSV
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNIDL---NY-DYVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVAELGNWIEE 192
>gi|297583716|ref|YP_003699496.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
gi|297142173|gb|ADH98930.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
selenitireducens MLS10]
Length = 212
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + P PE A+ GRSNVGKSS IN L+ +K LA TS++PGKTQ
Sbjct: 2 KVNQAELVISAAKQDQFPGTMIPEVALSGRSNVGKSSFINTLINRKGLARTSQRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N ++ VD+PGYG+AK R W + YF +RE L GV+ LID+ P +
Sbjct: 62 LNFYIINDRFHFVDVPGYGYAKVSKAERAAWGKTLELYFSSREQLNGVVQLIDSRHKPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +WL + + + TKCDK+ K + + I N P IM SS
Sbjct: 122 DDILMYDWLKHHGHKVVLIATKCDKIPRGKWAKSKKQISG-----DLNRDPSDPLIMFSS 176
Query: 198 VTGLGRDELLLHMSQL 213
TG G++E + L
Sbjct: 177 ETGQGKEEAWREIKDL 192
>gi|424714433|ref|YP_007015148.1| Probable GTP-binding protein EngB [Listeria monocytogenes serotype
4b str. LL195]
gi|424013617|emb|CCO64157.1| Probable GTP-binding protein EngB [Listeria monocytogenes serotype
4b str. LL195]
Length = 203
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 12 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 71
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 72 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 131
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 132 DRMMYEFLKYYDIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 184
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 185 SETKMGKDE 193
>gi|116872987|ref|YP_849768.1| ribosome biogenesis GTP-binding protein YsxC [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|123458496|sp|A0AJ07.1|ENGB_LISW6 RecName: Full=Probable GTP-binding protein EngB
gi|116741865|emb|CAK20989.1| GTP-binding protein, putative [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L IP+ V TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYEIPVIVVATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|16803598|ref|NP_465083.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes EGD-e]
gi|254828207|ref|ZP_05232894.1| GTPase EngB [Listeria monocytogenes FSL N3-165]
gi|284801949|ref|YP_003413814.1| GTPase EngB [Listeria monocytogenes 08-5578]
gi|284995091|ref|YP_003416859.1| GTPase EngB [Listeria monocytogenes 08-5923]
gi|386043869|ref|YP_005962674.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes 10403S]
gi|386050534|ref|YP_005968525.1| GTPase EngB [Listeria monocytogenes FSL R2-561]
gi|386053811|ref|YP_005971369.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes Finland 1998]
gi|404284051|ref|YP_006684948.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2372]
gi|404410861|ref|YP_006696449.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC5850]
gi|404413638|ref|YP_006699225.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC7179]
gi|405758607|ref|YP_006687883.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2479]
gi|24418381|sp|Q8Y6X3.1|ENGB_LISMO RecName: Full=Probable GTP-binding protein EngB
gi|16410987|emb|CAC99636.1| lmo1558 [Listeria monocytogenes EGD-e]
gi|258600596|gb|EEW13921.1| GTPase EngB [Listeria monocytogenes FSL N3-165]
gi|284057511|gb|ADB68452.1| GTPase EngB [Listeria monocytogenes 08-5578]
gi|284060558|gb|ADB71497.1| GTPase EngB [Listeria monocytogenes 08-5923]
gi|345537103|gb|AEO06543.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes 10403S]
gi|346424380|gb|AEO25905.1| GTPase EngB [Listeria monocytogenes FSL R2-561]
gi|346646462|gb|AEO39087.1| ribosome biogenesis GTP-binding protein YsxC [Listeria
monocytogenes Finland 1998]
gi|404230687|emb|CBY52091.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC5850]
gi|404233553|emb|CBY54956.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2372]
gi|404236489|emb|CBY57891.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC2479]
gi|404239337|emb|CBY60738.1| GTPase/GTP-binding protein [Listeria monocytogenes SLCC7179]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L +IP+ + TK DK+ +K ++ N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYDIPVIVIATKADKIPRSKWQK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDE 205
S T +G+DE
Sbjct: 176 SETKMGKDE 184
>gi|339624624|ref|ZP_08660413.1| GTP-binding protein YsxC [Fructobacillus fructosus KCTC 3544]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ P+D RPEFA++GRSNVGKSSL N L+ +K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSPSQYPEDGRPEFALVGRSNVGKSSLTNTLINRKNFARTSGQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V + Y VD+PGYG+AK R + + Y R+ L GV+ L+DA P +
Sbjct: 63 NFYSVEDALYFVDVPGYGYAKVSKKKREAFGQMIETYISTRKQLRGVISLVDARHKPSQE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ K + + IK P + + SSV
Sbjct: 123 DIMMYQWLAYYNIPVLLVATKADKIARGKLNQSESIIKKAVDFD----PSNSDFCFFSSV 178
Query: 199 TGLGRDEL 206
T G++++
Sbjct: 179 TKSGKEKV 186
>gi|387929926|ref|ZP_10132603.1| GTP-binding protein YsxC [Bacillus methanolicus PB1]
gi|387586744|gb|EIJ79068.1| GTP-binding protein YsxC [Bacillus methanolicus PB1]
Length = 194
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E V S+ + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KINSAEIVVSAVKPDQYPGQALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N ++Y VD+PGYG+AK R W + YF +RE L +L++D PP +
Sbjct: 62 LNFYLINGAFYFVDVPGYGYAKVSKSERAAWGKMIETYFTSREQLKAAVLIVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP + TK DK+ K ++ + K L+ +++ ++ SS
Sbjct: 122 DDVMMYDFLKHYEIPCIVIATKADKIPKGKWQKHLKITKEKLNLVPDDHS-----VIFSS 176
Query: 198 VTGLGRDEL 206
TG G++++
Sbjct: 177 ETGEGKEKV 185
>gi|315653482|ref|ZP_07906403.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
ATCC 55195]
gi|315489173|gb|EFU78814.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
ATCC 55195]
Length = 195
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 93/147 (63%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +FV S+ K P+DD PEFA+ GRSNVGKSSLINA++ ++ LA TS++PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEFALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +LVN Y VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D++ N+ NIP+ V TK DK+K
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLK 148
>gi|299535611|ref|ZP_07048932.1| GTP-binding protein [Lysinibacillus fusiformis ZC1]
gi|424739021|ref|ZP_18167446.1| GTP-binding protein [Lysinibacillus fusiformis ZB2]
gi|298728811|gb|EFI69365.1| GTP-binding protein [Lysinibacillus fusiformis ZC1]
gi|422947109|gb|EKU41509.1| GTP-binding protein [Lysinibacillus fusiformis ZB2]
Length = 193
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ
Sbjct: 2 KVHNVEMVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + YF R+ L V+ +ID PP
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKTEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L NIP + TK DK+ K + + +K +L + + P I+ SS
Sbjct: 122 DDRMMYDFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLELEKSD-----PLIVFSS 176
Query: 198 VTGLGRDE 205
TGLG +E
Sbjct: 177 ETGLGFEE 184
>gi|258405422|ref|YP_003198164.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
gi|257797649|gb|ACV68586.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium
retbaense DSM 5692]
Length = 205
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 8/186 (4%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+E ++ A+ P D P+ A+ GRSNVGKSSLINAL +K+LA S PGKT+ +N +
Sbjct: 4 LELETTAYTAEQFPSLDVPQVALAGRSNVGKSSLINALAGRKKLAKISSTPGKTRSLNFY 63
Query: 82 -LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
+Y+VDLPGYG+AK R W++ YF L V++L+D+ +PPQK+DL
Sbjct: 64 RAAGDGFYLVDLPGYGYAKRSKTERGQWAALMDVYFQKSTGLQAVVVLLDSRLPPQKLDL 123
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ ++L R +IPL TK DK K +++ Q+ +E P I+ S+ TG
Sbjct: 124 ELISFLQRESIPLIAALTKADKCK-------NKDRSRVQRQWKELLSPSAPLILFSAKTG 176
Query: 201 LGRDEL 206
+G+ L
Sbjct: 177 MGKQTL 182
>gi|78484393|ref|YP_390318.1| HSR1-like GTP-binding protein [Thiomicrospira crunogena XCL-2]
gi|119369276|sp|Q31JM9.1|ENGB_THICR RecName: Full=Probable GTP-binding protein EngB
gi|78362679|gb|ABB40644.1| cell division checkpoint GTPase YihA [Thiomicrospira crunogena
XCL-2]
Length = 212
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
H ++ ++KS+ CP+D E A GRSN GKSS +N + ++ LA TSK PG+T
Sbjct: 3 HPLYQQATYLKSAPDLSHCPEDFGYEVAFAGRSNAGKSSALNVITSQRGLAKTSKTPGRT 62
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
QLIN F ++ +VDLPGYG+AK T+ W Y R SL G+++++D+ +PP
Sbjct: 63 QLINFFECDEQRKLVDLPGYGYAKVNVNTKRAWERSLSQYIEVRSSLKGLIMMVDSRMPP 122
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDEN-IKSFQQLIRENYPHHPPWIM 194
+IDL +W N+P+ + TK DK+K KG P +N + +QL+ E YPH +
Sbjct: 123 TEIDLMMLDWTLTLNLPVHILLTKSDKLK--KG--PAQNSLLKMRQLLNEKYPHATVQLF 178
Query: 195 TSSVTGLGRDELLLHMSQLRNY 216
SS+ G DE+ + + Y
Sbjct: 179 -SSLKRQGLDEVWAKLDEWMEY 199
>gi|433461291|ref|ZP_20418901.1| GTP-binding protein YsxC [Halobacillus sp. BAB-2008]
gi|432190118|gb|ELK47161.1| GTP-binding protein YsxC [Halobacillus sp. BAB-2008]
Length = 195
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + V S+ K PKD PE A+ GRSNVGKSS IN ++++K LA TS KPGKTQ
Sbjct: 2 KVNTADIVISAASKKQYPKDFIPEIALAGRSNVGKSSFINRMIQRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N ++ VD+PGYG+AK R W + YF RE L L+ID P +
Sbjct: 62 LNFYIINDQFHFVDVPGYGYAKVSKKERAKWGEMMEEYFAEREQLKATALVIDVRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D ++L +P+ V TK DK+K KG+R K F +LIRE I
Sbjct: 122 DDQLMYDYLKHFGLPVMVVATKLDKIK--KGQR----TKQF-KLIREVLGMKEEDALIPF 174
Query: 196 SSVTGLGRD 204
SS TG G+D
Sbjct: 175 SSETGEGKD 183
>gi|325679699|ref|ZP_08159273.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8]
gi|324108514|gb|EGC02756.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8]
Length = 242
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EFV S G+ PK DRPEFA GRSNVGKSSLIN + +K +A S PGKT IN
Sbjct: 8 KAEFVTSYGKFSQIPKSDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTVTINF 67
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLL-LIDASVPPQKID 139
F V + Y VDLPGYG+A + W GY + E V ++ LID P K D
Sbjct: 68 FSV-EDVYFVDLPGYGYANVSKAEKGKWGELIGGYLGDFERYVEIVFQLIDMRHAPSKDD 126
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMK--VAKGRRP--DENIKSFQQLIRENYPHHPPWIMT 195
+ N+L N +P V TK DK+K K R E I F+ + H P+
Sbjct: 127 IQMINYLIDNEMPFVIVLTKADKLKPTARKARMAAFAEEIPCFEDI------HCIPF--- 177
Query: 196 SSVTGLGRDELLLHMSQLRNYW 217
S+VTG G DEL + ++R W
Sbjct: 178 SAVTGEGVDELKAVIEEVRQDW 199
>gi|254427895|ref|ZP_05041602.1| GTPase, putative [Alcanivorax sp. DG881]
gi|196194064|gb|EDX89023.1| GTPase, putative [Alcanivorax sp. DG881]
Length = 203
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + F++S+ R CP D+ E A GRSN GKSS IN L ++ LA TSK PG+TQL+
Sbjct: 10 LHQALFLQSAQRLDQCPPDEGLEVAFAGRSNAGKSSAINRLTSQRTLARTSKTPGRTQLL 69
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +++ +VDLPGYG+AK TR +W Y R++LVG++L++D P +
Sbjct: 70 NFFQLDEERRLVDLPGYGYAKVAKSTRNEWQQHLDHYLSERQALVGLVLMMDIRHPLKDF 129
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL W + N+P+ + TK DK+K + +K +QL +++P + S+
Sbjct: 130 DLLMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVK--KQL--KDHPAPLSLQLFSAT 185
Query: 199 TGLGRDE 205
G G DE
Sbjct: 186 NGTGCDE 192
>gi|90415434|ref|ZP_01223368.1| hypothetical protein GB2207_08961 [gamma proteobacterium HTCC2207]
gi|90332757|gb|EAS47927.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium
HTCC2207]
Length = 236
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%)
Query: 14 AGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPG 73
+ H + V F+ S+ K CP+D E A GRSN GKSS IN L R + LA TSK PG
Sbjct: 27 SNHIDYQRVTFLTSAPSIKQCPEDSGCEVAFAGRSNAGKSSAINTLTRIRGLARTSKTPG 86
Query: 74 KTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASV 133
+TQLIN F + +VDLPGYG+AK P + +W Y R+SL G++LL+D
Sbjct: 87 RTQLINFFDLGNDKRLVDLPGYGYAKVPIEMKREWDRDLAEYLQLRQSLAGLVLLMDIRH 146
Query: 134 PPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
P Q+ DL NW + +P+ + TK DK+K G+
Sbjct: 147 PLQEFDLQMLNWAAQAGLPVHILLTKSDKLKRGPGQ 182
>gi|339007536|ref|ZP_08640110.1| putative GTP-binding protein EngB [Brevibacillus laterosporus LMG
15441]
gi|338774739|gb|EGP34268.1| putative GTP-binding protein EngB [Brevibacillus laterosporus LMG
15441]
Length = 211
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ + PKD PE A++GRSNVGKSSLIN ++ +K +A TS +PGKTQ
Sbjct: 2 KITSAEFIISAVGPQQYPKDRLPEIALVGRSNVGKSSLINKMLSRKAIARTSSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F VN Y VD PGYG+AK + W Y RE L V+ L+D P K
Sbjct: 62 LNYFKVNNQMYFVDFPGYGYAKVSKSIKSTWGGMIDAYLSKREELRFVVQLVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ + IP V TK D K+++GR +++K +Q + N+ I+ S+
Sbjct: 122 EDVSMYEYCKELGIPTIVVATKGD--KISRGRWL-QHLKVIRQTL--NFQSTDALIVFST 176
Query: 198 VTGLGRDEL 206
G GRDEL
Sbjct: 177 EMGQGRDEL 185
>gi|421870974|ref|ZP_16302596.1| ribosome biogenesis GTP-binding protein YsxC [Brevibacillus
laterosporus GI-9]
gi|372459601|emb|CCF12145.1| ribosome biogenesis GTP-binding protein YsxC [Brevibacillus
laterosporus GI-9]
Length = 211
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ + PKD PE A++GRSNVGKSSLIN ++ +K +A TS +PGKTQ
Sbjct: 2 KITSAEFIISAVGPQQYPKDRLPEIALVGRSNVGKSSLINKMLSRKAIARTSSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F VN Y VD PGYG+AK + W Y RE L V+ L+D P K
Sbjct: 62 LNYFKVNNQMYFVDFPGYGYAKVSKSIKSTWGGMIDAYLSKREELKFVVQLVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ + IP V TK D K+++GR +++K +Q + N+ I+ S+
Sbjct: 122 EDVSMYEYCKELGIPTIVVATKGD--KISRGRWL-QHLKVIRQTL--NFQSTDALIVFST 176
Query: 198 VTGLGRDEL 206
G GRDEL
Sbjct: 177 EMGQGRDEL 185
>gi|385814047|ref|YP_005850440.1| GTP-binding protein engB [Lactobacillus helveticus H10]
gi|323466766|gb|ADX70453.1| Probable GTP-binding protein engB [Lactobacillus helveticus H10]
Length = 196
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 11/201 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK + S+ R PKD+ E A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ +
Sbjct: 3 IKSSNYAVSAVREDQYPKDNLSEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N +Y+VD+PGYG+A+ R ++ + Y R +L G+++LID+ P K
Sbjct: 63 NFYLINDEFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ N+ N+P+ V TK DK+K ++ + +K L NY H + SSV
Sbjct: 123 DIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNIDL---NYD-HVTVLTFSSV 178
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T LH+++L N+ ++
Sbjct: 179 TK-------LHVAELGNWIEE 192
>gi|182627119|ref|ZP_02954837.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
gi|177907508|gb|EDT70166.1| hypothetical protein CJD_0168 [Clostridium perfringens D str.
JGS1721]
Length = 197
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK EF+ S+ + + P ++ PE A +GRSNVGKSS+IN+L ++ LA S+ PGKT+L
Sbjct: 2 KIKSSEFIISAVKREQYPDNNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+NK +Y+VDLPGYG+AK + W + + Y LNR L V+LL+D P
Sbjct: 62 INFFLLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIMT 195
D+ W+ + + TK DK+ + I ++LI+E P
Sbjct: 122 DDVQMYEWIKHYGYEVVVIATKSDKI-------SNNQIGKSEKLIKETLGLPKDHKLKFF 174
Query: 196 SSVTGLGRDELLLHM 210
SS+ G+DEL+ ++
Sbjct: 175 SSLNKKGKDELVDYL 189
>gi|289434838|ref|YP_003464710.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|315303325|ref|ZP_07873954.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL
F6-596]
gi|347548941|ref|YP_004855269.1| GTP binding protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|422419159|ref|ZP_16496114.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri
FSL N1-067]
gi|422422284|ref|ZP_16499237.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri
FSL S4-171]
gi|289171082|emb|CBH27624.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313628305|gb|EFR96809.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL
F6-596]
gi|313633109|gb|EFS00007.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri
FSL N1-067]
gi|313637682|gb|EFS03061.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri
FSL S4-171]
gi|346982012|emb|CBW85997.1| Hypothetical GTP binding protein [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 194
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 9/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE + S+ R + P+ D PE+A+ GRSNVGKSS IN ++R+K +A S+KPGKTQ +
Sbjct: 3 VNNVELIISAVRPEQYPETDIPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + ++ + VD+PGYGFAK R W + Y +RE L GV+ ++D P +
Sbjct: 63 NFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTS 196
D +L IP+ V TK DK+ +K + N K ++RE P +++ S
Sbjct: 123 DRMMYEFLKYYEIPVIVVATKADKIPRSKWHK---NAK----IVRETLDFDPDDKFVLFS 175
Query: 197 SVTGLGRDELLLHMSQ 212
S T +G+DE ++ +
Sbjct: 176 SETKMGKDEAWQYIKE 191
>gi|294792179|ref|ZP_06757327.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
6_1_27]
gi|294457409|gb|EFG25771.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
6_1_27]
Length = 232
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISDTEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + + +I I+E
Sbjct: 146 CLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKL-TAKEKSANLSI------IKEL 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P I+ SS+ GR+ L ++++
Sbjct: 199 YPTATPPILYSSLKHTGRELLQQRINKI 226
>gi|417001175|ref|ZP_11941089.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ACS-068-V-Sch12]
gi|333975658|gb|EGL76537.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ACS-068-V-Sch12]
Length = 232
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISDTEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + + +I I+E
Sbjct: 146 CLLIDGRHPEMTIDKVAFDWLVEAGVPLQIVVTKADKL-TAKEKSANLSI------IKEL 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P I+ SS+ GR+ L ++++
Sbjct: 199 YPTATPPILYSSLKHTGRELLQQRINKI 226
>gi|402297606|ref|ZP_10817368.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
gi|401727143|gb|EJT00339.1| GTP-binding protein YsxC [Bacillus alcalophilus ATCC 27647]
Length = 195
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE + + + P PE A+ GRSNVGKSS IN ++ +K LA TS +PGKTQ
Sbjct: 2 KVTNVELATVAVKPEQYPNTQLPEVALAGRSNVGKSSFINKMINRKALARTSGRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N ++VN+ Y VD+PGYGFAK R W + Y +RE L V+ LID P +
Sbjct: 62 LNFYMVNEMVYFVDVPGYGFAKVSKSEREAWGRMIETYLQSREPLKAVIQLIDIRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D WL IP+ V TK DK+ P + Q++I + HP P ++
Sbjct: 122 DDKLMYEWLKHFEIPVIIVATKSDKI-------PKGKWQKHQKVIEKELNKHPEDPVVLF 174
Query: 196 SSVTGLGRDE 205
SS TG G++E
Sbjct: 175 SSETGNGKEE 184
>gi|294794044|ref|ZP_06759181.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
3_1_44]
gi|294455614|gb|EFG23986.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp.
3_1_44]
Length = 232
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEECRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + + +I I+E
Sbjct: 146 CLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKL-TAKEKSANLSI------IKEL 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P I+ SS+ GR+ L ++++
Sbjct: 199 YPTATPPILYSSLKHTGRELLQQRINKI 226
>gi|392373588|ref|YP_003205421.1| GTP-binding protein engB [Candidatus Methylomirabilis oxyfera]
gi|258591281|emb|CBE67578.1| putative GTP-binding protein engB [Candidatus Methylomirabilis
oxyfera]
Length = 230
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%)
Query: 13 YAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKP 72
Y +I EFV S P++ R E A++GRSNVGKSSLIN L+R++ LA S P
Sbjct: 6 YTNPVKILSAEFVTSVSSLAQLPREPRAEIAVVGRSNVGKSSLINCLLRRRGLARVSGVP 65
Query: 73 GKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
G+TQL+N FL+N+ +Y+VDLPGYG+AK PD R+ W +GY + L V++LIDA
Sbjct: 66 GRTQLLNFFLINRDFYLVDLPGYGYAKVPDSIRLAWGPLIEGYLASDRDLRVVIVLIDAR 125
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMK 164
+ DL L +I V TK DK++
Sbjct: 126 QGVTEKDLQMKGLLDNFSINWIPVLTKIDKLR 157
>gi|393200096|ref|YP_006461938.1| GTPase [Solibacillus silvestris StLB046]
gi|406665862|ref|ZP_11073633.1| putative GTP-binding protein EngB [Bacillus isronensis B3W22]
gi|327439427|dbj|BAK15792.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405386381|gb|EKB45809.1| putative GTP-binding protein EngB [Bacillus isronensis B3W22]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE + S R + P+D PEFA+ GRSNVGKSS IN ++ +K +A S KPGKTQ
Sbjct: 2 KVHNVEMIGSFVRPEQFPEDGLPEFALAGRSNVGKSSFINRMIGRKAMARISSKPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + Y VD+PGYG+AK R W + YF+ RE L V+L++D P
Sbjct: 62 LNFYKIEEQLYYVDVPGYGYAKVSKSERAAWGRMIEQYFMGREQLRAVVLIVDIRHNPTS 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L NIP+ V TK DK+ K + + ++ Q+ +++ P I+ SS
Sbjct: 122 DDCMMYDFLKHYNIPVIVVATKADKIPKGKWDKHKKIVRETLQMEKQD-----PLIVFSS 176
Query: 198 VTGLGRDE 205
GLG ++
Sbjct: 177 EKGLGLEQ 184
>gi|262340870|ref|YP_003283725.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272207|gb|ACY40115.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 208
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I V+F K S + + + PE+A +GRSNVGKSSLIN + +K++A S PG+TQ
Sbjct: 2 KIFSVKF-KGSSKTINVFIHNFPEYAFVGRSNVGKSSLINWITGRKKIAKVSSYPGRTQY 60
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
INHFL+N WY++DLPGYGF A + Y +R++LVG+ LLID+ Q+
Sbjct: 61 INHFLINNQWYLIDLPGYGFF-AEKKIKEKAQKLISDYIFHRKNLVGLFLLIDSRFLIQQ 119
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD L + VFTK DK+ + ++NI + I N P W S+
Sbjct: 120 IDLDFIQKLNNKKMDFCIVFTKTDKLNY---KLIEKNISFCIEKIENNGFTMPVWFKVSA 176
Query: 198 VTGLGRDELLLHMSQLRNYW 217
GR+ ++ ++ +L +++
Sbjct: 177 KKKDGRNNIIQYIKKLNDFY 196
>gi|430841435|ref|ZP_19459354.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1007]
gi|431071688|ref|ZP_19494659.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1604]
gi|430494211|gb|ELA70461.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1007]
gi|430567321|gb|ELB06407.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1604]
Length = 195
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA S KPGKTQ
Sbjct: 2 KVHQAEIIISAVSPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARISGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|456014399|gb|EMF48014.1| GTP-binding protein EngB [Planococcus halocryophilus Or1]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K +A S KPGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y RE L V+ ++D PP K
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITGREPLRAVIQIVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +++ IP + TK DK+ K + + +++ ++ + + P I+ SS
Sbjct: 122 DDVAMYDFMKHFEIPCIIIATKADKIPKGKWDKHKKIVRTTLEMEKTD-----PLIVFSS 176
Query: 198 VTGLGRDE 205
TGLG+DE
Sbjct: 177 ETGLGKDE 184
>gi|344338736|ref|ZP_08769667.1| GTP-binding protein engB [Thiocapsa marina 5811]
gi|343801318|gb|EGV19261.1| GTP-binding protein engB [Thiocapsa marina 5811]
Length = 214
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ ++ R CP D+ E A GRSN GKSS INAL + LA TSK PG+TQ +
Sbjct: 6 QRAHFLTAAARVDQCPADEGREVAFAGRSNAGKSSAINALCHQNALARTSKTPGRTQQLI 65
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++++ +VDLPGYG+AK PD + DW Y R SL G+++++D P + D
Sbjct: 66 FFQLDETRRLVDLPGYGYAKVPDSVKRDWQQHMAAYLEQRSSLGGLVVVMDIRHPLAEFD 125
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
+W GR ++P+ + TK DK+K R
Sbjct: 126 RQMLHWGGRADLPMLVLLTKADKLKTGAAR 155
>gi|323489957|ref|ZP_08095178.1| GTP-binding protein [Planococcus donghaensis MPA1U2]
gi|323396253|gb|EGA89078.1| GTP-binding protein [Planococcus donghaensis MPA1U2]
Length = 193
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K +A S KPGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y +RE L V+ ++D PP K
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +++ IP + TK DK+ K + + +++ + + + P I+ SS
Sbjct: 122 DDIAMYDFMKHFEIPCIIIATKADKIPKGKWDKHKKIVRTTLDMDKSD-----PLIVFSS 176
Query: 198 VTGLGRDE 205
TGLG+DE
Sbjct: 177 ETGLGKDE 184
>gi|339481433|ref|ZP_08657092.1| GTP-binding protein YsxC [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 162
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 91/158 (57%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVEMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R + + Y +R+ L GV+ L+DA P +
Sbjct: 63 NFYDVEDKLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEPSED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D+ WL NIP+ V TK DK+ K + + IK
Sbjct: 123 DISMYEWLHYYNIPILVVATKSDKISRGKFNKAESVIK 160
>gi|269798315|ref|YP_003312215.1| GTP-binding protein HSR1-like protein [Veillonella parvula DSM
2008]
gi|269094944|gb|ACZ24935.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM
2008]
Length = 232
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 113/208 (54%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + + +I I+E
Sbjct: 146 CLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKL-TAKEKSVNLSI------IKEL 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P I+ SS+ GR+ L ++++
Sbjct: 199 YPTATPPILYSSLKHTGRELLQQRINKI 226
>gi|317129824|ref|YP_004096106.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
cellulosilyticus DSM 2522]
gi|315474772|gb|ADU31375.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
cellulosilyticus DSM 2522]
Length = 197
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E + S+ + P PE A+ GRSNVGKSS IN ++ +K LA TS++PGKTQ
Sbjct: 2 KINSAEIIISAAKPHQFPAGPFPEVALSGRSNVGKSSFINTMLARKGLARTSQRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+ ++ VD+PGYG+AK R W + YF RE L GV+ LID P +
Sbjct: 62 LNWYFINERFHFVDVPGYGYAKVSKSEREAWGRVMETYFQEREQLKGVVQLIDIRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +WL + P+ V TK DK+ K + + IK +L E+ ++ SS
Sbjct: 122 DDVMMYDWLKHHEHPVLIVATKADKIPRGKWDKHVKQIKEHLELHTED-----KIVVFSS 176
Query: 198 VTGLGRDELLLHMSQL 213
TG G+++ MS L
Sbjct: 177 ETGQGKEKAWKEMSNL 192
>gi|335041125|ref|ZP_08534241.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
gi|334178923|gb|EGL81572.1| GTP-binding protein engB [Caldalkalibacillus thermarum TA2.A1]
Length = 213
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ +K P++ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTQAELVISAVSSKQYPQEALPEIALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++ VDLPGYG+A+ R W F + Y R+ L + L+D P +
Sbjct: 62 LNFYRINGQFFFVDLPGYGYARVSKKERERWGRFIEEYLTTRQQLQLICHLVDIRHKPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D A+WL +P + TK DK+ K + + +K QL ++ P I S+
Sbjct: 122 DDQMMADWLQAMALPRLVIATKADKISKGKIAKHLKLVKETLQLAKD-----VPLIAFSA 176
Query: 198 VTGLGRDEL 206
TGLG++E+
Sbjct: 177 ETGLGKEEV 185
>gi|301057780|ref|ZP_07198849.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
gi|300448091|gb|EFK11787.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium
NaphS2]
Length = 198
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+VEF+KS+ + + P DRPE A G+SNVGKSSLIN L +++LA TS PG+TQ IN
Sbjct: 2 DVEFIKSAFKEEHYPPSDRPEVAFAGKSNVGKSSLINTLTGRRKLARTSSTPGRTQAINF 61
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F K+ Y+VDLPGYGFA+ P + W + Y +R++L V++++D P D
Sbjct: 62 FRFGKTLYLVDLPGYGFARVPMKVKKSWGLMVEDYLRSRQTLKAVVVILDIRRDPSAGDA 121
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D NWL +I V TK DK+ + + IK
Sbjct: 122 DLINWLNYYHIVPIVVLTKADKVSRQQAGKRTARIK 157
>gi|365902984|ref|ZP_09440807.1| GTP-binding protein YsxC [Lactobacillus malefermentans KCTC 3548]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ P PE A++GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 3 EVNNVELVMSAVSPTQYPTTGYPEIALVGRSNVGKSSLTNVLINRRSYARTSSQPGKTQT 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + Y VD+PGYG+AK R W + Y RE L GV+ L+DA P +
Sbjct: 63 LNFYKVEEDLYFVDVPGYGYAKVSRQEREKWGEMIETYLTQREQLKGVISLVDARHEPSQ 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL IP+ V TK DK+ K + + IK + + +IM S+
Sbjct: 123 EDVQMYQWLSYYEIPILVVATKSDKIVRGKWNKQESIIKK-----KLEFDKKDSFIMFSA 177
Query: 198 VTGLGRDEL 206
T +G++++
Sbjct: 178 QTKMGKEDI 186
>gi|333394690|ref|ZP_08476509.1| GTP-binding protein YsxC [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392423|ref|ZP_08573822.1| GTP-binding protein YsxC [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
gi|420145898|ref|ZP_14653345.1| Putative GTP-binding protein EngB [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398402428|gb|EJN55770.1| Putative GTP-binding protein EngB [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 195
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI++VE V S+ P D PE A+ GRSNVGKSS+IN L+++K++A TS PGKTQ
Sbjct: 2 QIQDVELVISAVAPMQYPTDGLPEIALTGRSNVGKSSMINKLIQRKKMARTSSTPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++Y VD+PGYG+AK R +S + Y R++L GV+ LID P K
Sbjct: 62 LNFYKLNDAFYFVDVPGYGYAKVSKKDRESFSQMIETYLQERDNLRGVISLIDVRHEPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL +L +P+ V TK DK+ K + + +K +L + + ++ SS
Sbjct: 122 DDLAMYKYLQFFGVPVLVVATKGDKVPRGKWNQRESKLKKALELNQTD-----DLVVFSS 176
Query: 198 VTGLGRDEL 206
TG+G D++
Sbjct: 177 TTGIGGDQI 185
>gi|333448172|ref|ZP_08483114.1| GTP-binding protein YsxC [Leuconostoc inhae KCTC 3774]
Length = 205
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D+ WL NIP+ V TK DK+ +K + NIK
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSKFNKYASNIK 160
>gi|413956462|gb|AFW89111.1| hypothetical protein ZEAMMB73_308328 [Zea mays]
Length = 170
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 68/76 (89%)
Query: 1 MILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALV 60
M++PGSNIVVGPYAG +++K EFVKSS RA+DCP DDRPEFA+LGRSNVGKSSLINAL
Sbjct: 87 MVIPGSNIVVGPYAGDARVKGAEFVKSSARARDCPNDDRPEFAVLGRSNVGKSSLINALT 146
Query: 61 RKKELALTSKKPGKTQ 76
R+KE ALTSKKPG T+
Sbjct: 147 RRKEAALTSKKPGDTK 162
>gi|329121866|ref|ZP_08250481.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
micraerophilus DSM 19965]
gi|327467804|gb|EGF13296.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
micraerophilus DSM 19965]
Length = 213
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 18/195 (9%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
+VKS+ AK +D+ E A +GRSNVGKSSLIN+L K+LA S++PGKT+ IN++ V
Sbjct: 17 YVKSAVNAKQYAEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76
Query: 84 N-----------KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
+ WY+VDLPGYGFAK + WSSF Y E L+ + LL+D
Sbjct: 77 QSRKAINEEEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
P +D+ WL + + + + TK DK+ + R+ +K QL +PP
Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKLGNNEKRKNLAQVKKIFQL------KNPP- 189
Query: 193 IMTSSVTGLGRDELL 207
I SS+ GR ELL
Sbjct: 190 IAYSSLKNEGRKELL 204
>gi|406580643|ref|ZP_11055834.1| GTP-binding protein YsxC [Enterococcus sp. GMD4E]
gi|406582950|ref|ZP_11058045.1| GTP-binding protein YsxC [Enterococcus sp. GMD3E]
gi|406585294|ref|ZP_11060286.1| GTP-binding protein YsxC [Enterococcus sp. GMD2E]
gi|406590462|ref|ZP_11064829.1| GTP-binding protein YsxC [Enterococcus sp. GMD1E]
gi|410937248|ref|ZP_11369109.1| GTP-binding protein YsxC [Enterococcus sp. GMD5E]
gi|404453626|gb|EKA00671.1| GTP-binding protein YsxC [Enterococcus sp. GMD4E]
gi|404457356|gb|EKA03900.1| GTP-binding protein YsxC [Enterococcus sp. GMD3E]
gi|404462810|gb|EKA08517.1| GTP-binding protein YsxC [Enterococcus sp. GMD2E]
gi|404469295|gb|EKA14107.1| GTP-binding protein YsxC [Enterococcus sp. GMD1E]
gi|410734359|gb|EKQ76279.1| GTP-binding protein YsxC [Enterococcus sp. GMD5E]
Length = 195
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y R+ L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ H+ +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKAL-----DFDHNDTFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|340758790|ref|ZP_08695372.1| GTP-binding protein engB [Fusobacterium varium ATCC 27725]
gi|251836569|gb|EES65104.1| GTP-binding protein engB [Fusobacterium varium ATCC 27725]
Length = 196
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKD-DRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
IK+ +FVKS+ KD P+ + EFA +GRSNVGKSSLIN++ +K+LA TSK PG+TQL
Sbjct: 3 IKQADFVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQL 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLN-RESLVGVLLLIDASVPPQ 136
IN+F +N ++IVDLPGYGFAK P + +W Y + R+ LV VLL D P
Sbjct: 63 INYFKINNEFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIASPRKKLVFVLL--DIRRIPS 120
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ D++ +L ++IP +FTK DK+
Sbjct: 121 QEDIEMLVYLDHHDIPFKIIFTKMDKV 147
>gi|347753757|ref|YP_004861321.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
gi|347586275|gb|AEP10805.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Candidatus
Chloracidobacterium thermophilum B]
Length = 205
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ F+KS+ A + P PE A LGRSNVGKSSLIN+L+ + LA TS+ PG+TQL
Sbjct: 2 KVVAATFLKSATAAAEYPPPTLPEVAFLGRSNVGKSSLINSLLGMRGLARTSQTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N+ VDLPGYG+A+ P R W +GY R +L +L++DA + PQ
Sbjct: 62 INFFEINRELRFVDLPGYGYARVPQAVRERWRPMIEGYLNRRSALALCVLIVDARLEPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
+DL WL + V TK DK+
Sbjct: 122 LDLTMYEWLAAMSRRFCVVATKADKL 147
>gi|333981891|ref|YP_004511101.1| GTP-binding protein engB [Methylomonas methanica MC09]
gi|333805932|gb|AEF98601.1| GTP-binding protein engB [Methylomonas methanica MC09]
Length = 202
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 87/149 (58%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ +F+ S+ R +D P D E A GRSN GKSS IN LV++ LA SK PG+TQL+N
Sbjct: 7 QAKFINSAPRLQDAPPDQGMEIAFAGRSNAGKSSAINTLVQQNALARVSKTPGRTQLLNF 66
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F ++ +VDLPGYG+AK P + DW + Y NR++L G++L++D P + D
Sbjct: 67 FEIDTERKLVDLPGYGYAKVPVAVKRDWQKMMENYLKNRKALCGIVLVMDIRHPMTEFDW 126
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
W ++PL + TK DK+K +
Sbjct: 127 QMVEWCEHTHLPLHILLTKADKLKFGAAK 155
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 64/135 (47%), Positives = 91/135 (67%), Gaps = 5/135 (3%)
Query: 90 VDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRN 149
VDLPGYGFA AP+ R W+ FT+ Y L RE+L+ V+LLID++V PQ++DL+C +WLG
Sbjct: 2 VDLPGYGFANAPEALREKWAEFTREYLLKRETLITVMLLIDSTVKPQRLDLECLDWLGAA 61
Query: 150 NIPLTFVFTKCDK-MKVAKGRR--PDENIKSFQQLIREN--YPHHPPWIMTSSVTGLGRD 204
IP+T VFTK DK K+A G+R P E ++ F + +N + PP I TSS T G+
Sbjct: 62 GIPVTIVFTKVDKRKKIAAGKRANPQETMEEFCREAMDNWDWDELPPMIYTSSETAEGKR 121
Query: 205 ELLLHMSQLRNYWDQ 219
E+L H++ LR ++ +
Sbjct: 122 EVLNHIASLRQFFKK 136
>gi|331270301|ref|YP_004396793.1| HSR1-like GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126851|gb|AEB76796.1| GTP-binding protein, HSR1-related protein [Clostridium botulinum
BKT015925]
Length = 197
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 87/146 (59%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK EF+ S+ + P D+R E A +GRSN GKS+LIN + +K+LA TS PGKT+LI
Sbjct: 3 IKNSEFIISAVKPDQYPIDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y VDLPGYGFAK + W S + Y +NR L ++LL+D+ P K
Sbjct: 63 NFFLINNDFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ W+ V TK DK+K
Sbjct: 123 DVQMYEWIKYYGYEAIIVATKSDKLK 148
>gi|30250379|ref|NP_842449.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas europaea
ATCC 19718]
gi|81584537|sp|Q82S94.1|ENGB_NITEU RecName: Full=Probable GTP-binding protein EngB
gi|30181174|emb|CAD86370.1| putative GTP-binding protein [Nitrosomonas europaea ATCC 19718]
Length = 222
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
H + EF + R +D P+ E A GRSN GKSS IN LV ++ A SK PG+T
Sbjct: 3 HPLFRHAEFYTTVNRLQDLPQTAGVEVAFAGRSNAGKSSAINTLVGRERFAFVSKTPGRT 62
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
Q IN F + + ++VDLPGYG+A+ P R W Y R+SL G++L++D P
Sbjct: 63 QHINFFQLGEERFMVDLPGYGYAQVPLAIRQHWGHLLSSYLQTRQSLYGMILIMDIRHPL 122
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH 188
K+DL +W + P+ + TK DK+ ++ ++ F + NYPH
Sbjct: 123 TKLDLQMLDWFRQTKKPVHVLLTKADKLSKSRALVALNEVRQF---LTVNYPH 172
>gi|373857606|ref|ZP_09600347.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 1NLA3E]
gi|372452738|gb|EHP26208.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 1NLA3E]
Length = 194
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E + S+ + + P PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVNNAEIIISAVKPEQYPGGIMPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N+ ++ VD+PGYG+AK R W + Y +RE L VLL++D PP K
Sbjct: 62 LNFYLINEQFHFVDVPGYGYAKVSKSEREAWGKMLEIYITSREQLRAVLLIVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP+ + TK DK+ +K ++ K ++ + +M SS
Sbjct: 122 DDVLMYDFLKHYQIPVIVIATKADKIPKSKWQKHVRITKETLNMLESDL-----LVMFSS 176
Query: 198 VTGLGRDE 205
TG G+++
Sbjct: 177 ETGYGKEK 184
>gi|404495322|ref|YP_006719428.1| GTP-binding protein YsxC [Geobacter metallireducens GS-15]
gi|418067208|ref|ZP_12704557.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
gi|119369199|sp|Q39YG6.1|ENGB_GEOMG RecName: Full=Probable GTP-binding protein EngB
gi|78192941|gb|ABB30708.1| GTPase EngB [Geobacter metallireducens GS-15]
gi|373559209|gb|EHP85515.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter
metallireducens RCH3]
Length = 204
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EFV S R P + PE A GRSNVGKSSLIN LV +K L TS PG+TQL
Sbjct: 2 KVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F VN S +VDLPGYGFAK P + +W + Y R +L V+L++D P +
Sbjct: 62 INFFRVNGSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D WL N+ + V TKCDK+ +E K + R S+
Sbjct: 122 EDQLMLQWLRAYNVAVLVVVTKCDKVS------KNERAKQAAIITRTLGLARDEMAFFSA 175
Query: 198 VTGLGRDEL 206
++ GRDE+
Sbjct: 176 LSKEGRDEV 184
>gi|333398282|ref|ZP_08480095.1| GTP-binding protein YsxC [Leuconostoc gelidum KCTC 3527]
gi|406600262|ref|YP_006745608.1| GTP-binding protein YsxC [Leuconostoc gelidum JB7]
gi|406371797|gb|AFS40722.1| GTP-binding protein YsxC [Leuconostoc gelidum JB7]
Length = 194
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ WL NIP+ V TK DK+ +K + NIK Q + N + SS
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSKFNKYASNIK---QTLGFN-EDESDFQFFSSE 178
Query: 199 TGLGRDEL 206
T G+D++
Sbjct: 179 TKYGKDQV 186
>gi|89098931|ref|ZP_01171811.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89086335|gb|EAR65456.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 195
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ + P++ PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVNSAEIVISAVKPAQYPEESLPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N+ + VD+PGYG+AK R W + YF +RE L +L++D PP K
Sbjct: 62 LNFYLINEMMHFVDVPGYGYAKVSKKEREAWGRMIETYFTSREQLKAAVLIVDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ ++L + I + TK DK+ P + ++ +E P ++
Sbjct: 122 DDIMMYDFLKHHGIRCIIIATKADKI-------PKTKRQKHFKITKETLELEPGDDIVLF 174
Query: 196 SSVTGLGRDE 205
SS TG G+DE
Sbjct: 175 SSETGEGKDE 184
>gi|433449630|ref|ZP_20412494.1| GTP-binding protein YsxC [Weissella ceti NC36]
gi|429539144|gb|ELA07182.1| GTP-binding protein YsxC [Weissella ceti NC36]
Length = 200
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V+ S+ R P D PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 QVHNVDLKISAVRPNQYPDDGFPEVALVGRSNVGKSSLTNTLINRKAYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + Y VD+PGYG+AK R W + + Y R+ L GV+ L+DA P +
Sbjct: 62 LNFYNVEDAVYFVDVPGYGYAKVSKKEREKWGAMIETYLSQRKQLRGVISLVDARHSPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ NWL NIP+ V TK DK+ K + + IK ++L + P + M SS
Sbjct: 122 DDINMYNWLLYYNIPVLVVATKADKIARGKWNQAEALIK--RELDFD--PSSSEFTMFSS 177
Query: 198 VTGLGRDEL 206
T G++ +
Sbjct: 178 ETKYGKERV 186
>gi|374290162|ref|YP_005037215.1| GTP-binding protein [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
gi|358376954|gb|AEU09142.1| GTP-binding protein [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
Length = 213
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I V+F KS + PE+A GRSNVGKSSLIN ++ K+ A S PG+T+
Sbjct: 2 KIFSVKFKKSIENSNQFFYSTFPEYAFSGRSNVGKSSLINFIINSKKEAKVSSYPGRTKF 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N WY++DLPGYG++ + ++ K Y R +LV + LLID + QK
Sbjct: 62 INFFLINHKWYLIDLPGYGYSFQKNRI-IEKKKLIKDYIFYRTNLVYLFLLIDCRIIIQK 120
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DLD L NI VFTK DK+ + D NI ++ I +N+ P + S
Sbjct: 121 LDLDFIKKLKTYNIHFCIVFTKTDKI---NSKILDRNINYCKEKIEKNFFSMPKYFKVSV 177
Query: 198 VTGLGRDELLLHMSQLRNYWD 218
GR++L+ + L Y++
Sbjct: 178 KKKYGREKLIQVIQNLNEYFE 198
>gi|313891565|ref|ZP_07825175.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
microaerophilus UPII 345-E]
gi|313120024|gb|EFR43206.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
microaerophilus UPII 345-E]
Length = 213
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 18/195 (9%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
+VKS+ AK +D+ E A +GRSNVGKSSLIN+L K+LA S++PGKT+ IN++ V
Sbjct: 17 YVKSAVNAKQYVEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76
Query: 84 N-----------KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
+ WY+VDLPGYGFAK + WSSF Y E L+ + LL+D
Sbjct: 77 QSRKAINEKEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
P +D+ WL + + + + TK DK+ + R+ +K QL +PP
Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKLGNNEKRKNLAQVKKIFQL------KNPP- 189
Query: 193 IMTSSVTGLGRDELL 207
I SS+ GR ELL
Sbjct: 190 IAYSSLKNEGRKELL 204
>gi|257898294|ref|ZP_05677947.1| GTP-binding protein [Enterococcus faecium Com15]
gi|293557137|ref|ZP_06675691.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1039]
gi|294614148|ref|ZP_06694069.1| GTP-binding protein [Enterococcus faecium E1636]
gi|425054575|ref|ZP_18458080.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
505]
gi|425058923|ref|ZP_18462280.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
504]
gi|430835747|ref|ZP_19453734.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0680]
gi|430838152|ref|ZP_19456102.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0688]
gi|430849633|ref|ZP_19467406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1185]
gi|430858089|ref|ZP_19475718.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1552]
gi|431497646|ref|ZP_19514800.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1634]
gi|257836206|gb|EEV61280.1| GTP-binding protein [Enterococcus faecium Com15]
gi|291592998|gb|EFF24586.1| GTP-binding protein [Enterococcus faecium E1636]
gi|291600706|gb|EFF31004.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1039]
gi|403035527|gb|EJY46913.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
505]
gi|403037043|gb|EJY48369.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
504]
gi|430489109|gb|ELA65742.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0680]
gi|430492432|gb|ELA68846.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0688]
gi|430537384|gb|ELA77727.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1185]
gi|430546041|gb|ELA86007.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1552]
gi|430588581|gb|ELB26773.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1634]
Length = 195
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK R + +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALDFDRND-----TFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|251777864|ref|ZP_04820784.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082179|gb|EES48069.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 198
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D+R E A +GRSNVGKSSLIN+L +K+LA S PGKT+L
Sbjct: 2 RIKQSEFIISAVKPHQYPTDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y+VDLPGYG+AK + W + Y +RE L ++ L+D+ P
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W + V TK DK+K A+ ++ ++ I+ +L +++ + SS
Sbjct: 122 DDIMMYEWAKHFGYDVVIVATKSDKLKNAEFKKSEKLIRDTLKLTKDD-----KFYFYSS 176
Query: 198 VTGLGRDELL 207
+ G +EL+
Sbjct: 177 LNKKGTEELI 186
>gi|126653685|ref|ZP_01725604.1| GTP-binding protein [Bacillus sp. B14905]
gi|126589722|gb|EAZ83857.1| GTP-binding protein [Bacillus sp. B14905]
Length = 193
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ
Sbjct: 2 KVHNVEMVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + YF R+ L V+ +ID PP
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L NIP + TK DK+ K + + +K ++ + + P I+ SS
Sbjct: 122 DDRMMYDFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEMEKND-----PLIVFSS 176
Query: 198 VTGLGRDE 205
TGLG +E
Sbjct: 177 ETGLGFEE 184
>gi|90961519|ref|YP_535435.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|385840235|ref|YP_005863559.1| GTP-binding protein engB [Lactobacillus salivarius CECT 5713]
gi|418961154|ref|ZP_13513041.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
gi|119369208|sp|Q1WUI3.1|ENGB_LACS1 RecName: Full=Probable GTP-binding protein EngB
gi|90820713|gb|ABD99352.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214356|gb|ADJ78772.1| Probable GTP-binding protein engB [Lactobacillus salivarius CECT
5713]
gi|380344821|gb|EIA33167.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
Length = 196
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V S+ R + P PE A+ GRSNVGKSSLIN L+ ++ A TS +PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W+ + YF R+ L G + L+DA P +
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D +L NIP+ V TK DK+ +K + + I+ QL + + I+ S+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQLTKND-----RLILFSA 176
Query: 198 VTGLGRDEL 206
V +G+DE+
Sbjct: 177 VDKIGKDEV 185
>gi|219122173|ref|XP_002181426.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407412|gb|EEC47349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 9/197 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
++ V FV + + CP DR E +GRSNVGKSSL+N + +K LA TSK+PGKTQ
Sbjct: 1 VRRVIFVTGAVTMEGCPPSDRGEAVFIGRSNVGKSSLVNMVTNRKSLAYTSKRPGKTQQF 60
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F S+ IVDLPG+G+AK P+ R +WS F Y NR++L + L+D P
Sbjct: 61 NFFADQDSFNIVDLPGFGYAKVPEELRKEWSIFMDAYIANRKTLRVLFHLVDGRHGPTDE 120
Query: 139 DLDCANWLGR---NNIPLTFVFTKCDK-MKVA-----KGRRPDENIKSFQQLIRENYPHH 189
D +G V TK DK +K A G+ + + + +Q +++N +
Sbjct: 121 DASIMRRVGDLLPGYATYVVVLTKADKNVKGAASNKKAGKVSSDVVDAVRQAMKQNGVGN 180
Query: 190 PPWIMTSSVTGLGRDEL 206
P I+TS+ T LGRD++
Sbjct: 181 APVILTSAETKLGRDDI 197
>gi|399050838|ref|ZP_10740882.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. CF112]
gi|433542104|ref|ZP_20498538.1| GTP-binding protein EngB [Brevibacillus agri BAB-2500]
gi|398051554|gb|EJL43876.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Brevibacillus
sp. CF112]
gi|432186619|gb|ELK44086.1| GTP-binding protein EngB [Brevibacillus agri BAB-2500]
Length = 222
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EFV S+ K P+D E A++GRSNVGKSSL+N ++ +K LA S +PGKTQ
Sbjct: 2 KVTSAEFVISAVGPKQYPEDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F VN+ Y VD PGYG+AK + W +GY R+ L V+ L+D P K
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKKRKELRFVIQLVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W + IP V TK D K+A+GR ++ K +Q + N I+ SS
Sbjct: 122 DDVAMYEWCKQIGIPTVVVATKGD--KIARGRWL-QHTKIIRQTL--NMRGDDTIIVFSS 176
Query: 198 VTGLGRDEL 206
TG G+DEL
Sbjct: 177 ETGQGKDEL 185
>gi|300173594|ref|YP_003772760.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811]
gi|299887973|emb|CBL91941.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811]
Length = 194
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVDMVMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D+ WL NIP+ V TK DK+ +K + NIK
Sbjct: 123 DVSMYEWLHYYNIPILIVATKSDKISKSKFNKYASNIK 160
>gi|302874449|ref|YP_003843082.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|307690944|ref|ZP_07633390.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
gi|302577306|gb|ADL51318.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
cellulovorans 743B]
Length = 201
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EFV S+ + P+DD PE A +GRSNVGKSSLIN L +K+L S+ PGKT+L
Sbjct: 2 EIKQAEFVTSAVKTSQYPQDDIPEVAFVGRSNVGKSSLINTLTNRKKLVKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F++N + VDLPGYG+AK R W + Y NR L V+LL+D+ P +
Sbjct: 62 VNFFIINNVMHFVDLPGYGYAKVSKNERDSWGKTIETYLHNRPQLKKVILLLDSRRVPNE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +W+ V TK DK+ ++N K + I+ P SS
Sbjct: 122 DDILMYDWILHYGYEAVIVLTKVDKL---TKNELNKNQKIIAEAIK--LPKGAKMYKFSS 176
Query: 198 VTGLGRDELL 207
+ G++ELL
Sbjct: 177 LKKTGKEELL 186
>gi|374603435|ref|ZP_09676414.1| GTP-binding protein YsxC [Paenibacillus dendritiformis C454]
gi|374390906|gb|EHQ62249.1| GTP-binding protein YsxC [Paenibacillus dendritiformis C454]
Length = 207
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ P D PE + GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KITNAEFIISAVGPAQYPDDGFPEIGLAGRSNVGKSSLINKMIMRKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N S Y VD+PGYG+AK V R W + YF R++L VLL++D PP +
Sbjct: 62 LNYYRINDSMYFVDVPGYGYAKVSKVQRAAWGKMIEAYFRERDALRLVLLVVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D WL +P+ V TK D KV K R P K +Q +R H P ++
Sbjct: 122 DDCMMHQWLTHYEVPVAVVATKAD--KVPKSRWP----KHLKQ-VRTTLGLHADTPLVLF 174
Query: 196 SSVTGLGRDEL 206
S+ TG GR+EL
Sbjct: 175 SAETGQGREEL 185
>gi|110835513|ref|YP_694372.1| GTP-binding protein [Alcanivorax borkumensis SK2]
gi|119368787|sp|Q0VL48.1|ENGB_ALCBS RecName: Full=Probable GTP-binding protein EngB
gi|110648624|emb|CAL18100.1| GTP-binding protein [Alcanivorax borkumensis SK2]
Length = 208
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + F++S+ R CP D+ E A GRSN GKSS IN L ++ LA TSK PG+TQL
Sbjct: 9 RLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQL 68
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F +++ +VDLPGYG+AK R +W Y R++LVG++L++D P +
Sbjct: 69 LNFFQLDEERRLVDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRHPLKD 128
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL W + N+P+ + TK DK+K + + Q+ ++E +P + S+
Sbjct: 129 FDLMMLEWSAQANMPIHILMTKADKLKFGAAK---STLLQVQKQLKE-HPAPLSLQLFSA 184
Query: 198 VTGLGRDE 205
G G DE
Sbjct: 185 TNGTGCDE 192
>gi|87120351|ref|ZP_01076246.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Marinomonas sp. MED121]
gi|86164454|gb|EAQ65724.1| putative GTPase, involved in coordination of cell cycle (EngB)
[Marinomonas sp. MED121]
Length = 211
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 108/206 (52%), Gaps = 25/206 (12%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S + F+KS+ + CP D E A GRSN GKS+ +N L +K+LA TSK PG+TQ
Sbjct: 6 SIFRSAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTDQKKLARTSKTPGRTQ 65
Query: 77 LINHFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
LIN F +N + ++DLPGYGFAK P +M W + + Y +NR SL GV+L++D P
Sbjct: 66 LINCFGLNVEDRRLIDLPGYGFAKVPVAMKMKWQAHMQDYLMNRRSLAGVVLVMDIRHPL 125
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMK----------VAKGRRPDENIKSFQQLIREN 185
++ D +W N + + + TK DK+K VAK + E I S Q
Sbjct: 126 KEFDHMMLDWAKSNKMQVHVILTKSDKLKRGPAKSTKLQVAKALKDLEVIGSVQTF---- 181
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMS 211
S + G G DEL L +S
Sbjct: 182 ----------SGLNGDGIDELRLKLS 197
>gi|310829088|ref|YP_003961445.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum
KIST612]
gi|308740822|gb|ADO38482.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum
KIST612]
Length = 193
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + P+D+ PE +LGRSNVGKSS IN L+++K LA TS +PGKTQ
Sbjct: 2 KVTQAEIVISAVQQSQYPEDNLPEIVLLGRSNVGKSSFINTLIQRKGLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N ++Y VD+PGYG+AK R W + Y RE++V VLLL+D+ P +
Sbjct: 62 MNFYKINDAFYFVDMPGYGYAKVSKKEREKWGVMIEEYLQKRENMVLVLLLVDSRHEPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D +WL + + TK DK+ + ++ +NI F L I+ S+
Sbjct: 122 DDRLMYDWLTYYGLDPVIIATKADKISKVRQKKAVDNI--FNTL---RPRKRSDVILFSA 176
Query: 198 VTGLGRDE 205
T +G+DE
Sbjct: 177 ATKMGKDE 184
>gi|451980845|ref|ZP_21929230.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
gi|451761967|emb|CCQ90471.1| putative GTP-binding protein EngB [Nitrospina gracilis 3/211]
Length = 203
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + EF+ + K P PE A +GRSNVGKSSLIN+LV +K+L TS PGKTQ+
Sbjct: 2 KIVKAEFITGAVSRKQFPNQPLPEIAFIGRSNVGKSSLINSLVNRKKLVKTSATPGKTQM 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N W + DLPGYGFAK P + W + Y RE L V+L++D P +
Sbjct: 62 INFFNINDVWMLADLPGYGFAKVPPQVQKKWQVLIEDYLQERERLESVVLIVDIRRKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+DL +WL + V TK DK+ + ++ IK +M SS
Sbjct: 122 LDLVMRDWLEDAGLDYVVVATKSDKLSQTERKQQMAKIKK-----EFGGDGVRTVLMYSS 176
Query: 198 VTGLGRDELLLHMSQLR 214
GR EL H S R
Sbjct: 177 KNNHGRKELWNHFSNRR 193
>gi|408374776|ref|ZP_11172459.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
gi|407765435|gb|EKF73889.1| GTP-binding protein [Alcanivorax hongdengensis A-11-3]
Length = 214
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + F++S+ R CP D+ E A GRSN GKSS IN L ++ LA TSK PG+TQL+
Sbjct: 10 LHQARFLQSAQRLDQCPADEGLEVAFAGRSNAGKSSAINRLTSQRTLARTSKTPGRTQLL 69
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +++ +VDLPGYG+AK R +W Y R++LVG++L++D P +
Sbjct: 70 NFFELDEHRRLVDLPGYGYAKVAKTKRNEWQQHLDHYLAERQALVGLVLMMDIRHPLKDF 129
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL W + +P+ + TK DK+K + +KS QL + +P + S+
Sbjct: 130 DLLMLEWSAQAEMPIHILMTKADKLKFGAAKNTLMKVKS--QLSK--HPAPLSLQLFSAT 185
Query: 199 TGLGRDE 205
G G DE
Sbjct: 186 NGTGCDE 192
>gi|395242145|ref|ZP_10419144.1| GTPase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480506|emb|CCI85384.1| GTPase [Lactobacillus pasteurii CRBIP 24.76]
Length = 195
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 92/146 (63%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ E+ S+ + PKD+ PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ +
Sbjct: 3 IKKSEYAVSAVKESQYPKDNFPEIALAGRSNVGKSSLINTLINRKNLARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N +Y+VD+PGYG+AK R ++ + Y RE+L G+++L+D P +
Sbjct: 63 NFYRINGEFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRENLKGLMILVDGRHEPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ + ++P+ V TK DK+K
Sbjct: 123 DIAMYQYAQYLDLPILVVATKIDKIK 148
>gi|296110625|ref|YP_003621006.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|339490283|ref|YP_004704788.1| GTP-binding protein YsxC [Leuconostoc sp. C2]
gi|295832156|gb|ADG40037.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|338851955|gb|AEJ30165.1| GTP-binding protein YsxC [Leuconostoc sp. C2]
Length = 194
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 92/158 (58%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ V S+ A P D +PE A++GRSNVGKSSL N L+++K A TS +PGKTQ +
Sbjct: 3 VHNVDMVMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y +R+ L GV+ L+DA P
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHEPSDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D+ WL NIP+ V TK DK+ K + + NIK
Sbjct: 123 DVSMYEWLHFYNIPILVVATKSDKISKGKFNKYESNIK 160
>gi|410727506|ref|ZP_11365722.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium sp.
Maddingley MBC34-26]
gi|410598580|gb|EKQ53149.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium sp.
Maddingley MBC34-26]
Length = 198
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D+R E A +GRSNVGKSSLIN+L +K+LA S+ PGKT+L
Sbjct: 2 RIKKSEFITSAVKKNQYPIDNRVEIAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N +Y+VDLPGYG+AK + W + Y +RE L V+LL+D+ P
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSQAEKDSWGKTVEMYLNDREQLKRVVLLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ + + TK DK+ + + ++ I+ +L E+ + SS
Sbjct: 122 DDIMMHEWIKHFGYDVIVIATKSDKLTRNELNKNEKVIRDTLKLNLEDKLY-----FFSS 176
Query: 198 VTGLGRDELL 207
+ GRDEL+
Sbjct: 177 LNRNGRDELI 186
>gi|238018910|ref|ZP_04599336.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748]
gi|237864394|gb|EEP65684.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748]
Length = 232
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 107/201 (53%), Gaps = 19/201 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A +GRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFIGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNKS------------WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F V W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDVESKEDISETEERRYHWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + + I I+E
Sbjct: 146 CLLIDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKVDKL-TAKEKSANLAI------IKEM 198
Query: 186 YPHHPPWIMTSSVTGLGRDEL 206
YP P I+ SS+ GR+ L
Sbjct: 199 YPTATPPILYSSLKHTGRELL 219
>gi|386714982|ref|YP_006181305.1| GTPase EngB [Halobacillus halophilus DSM 2266]
gi|384074538|emb|CCG46031.1| GTPase EngB [Halobacillus halophilus DSM 2266]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + V S+ K PK PE A+ GRSNVGKSS IN ++++K LA TS KPGKTQ
Sbjct: 2 KVNYADIVISAASKKQYPKAPIPEIALAGRSNVGKSSFINKMIQRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N ++ VD+PGYG+AK R W + YF RE L L+ID+ P +
Sbjct: 62 LNFYIINDLFHFVDVPGYGYAKVSKKERAKWGEMMEEYFSEREQLRATALIIDSRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ N+L +P+ + TK DK+K ++ + +K+ QQ++ I SS
Sbjct: 122 DDVIMYNYLKHFGLPVMVIATKLDKLKKSQKHK---QLKTIQQVLE--MEEEDTLIPFSS 176
Query: 198 VTGLGRD 204
TG G++
Sbjct: 177 ETGEGKE 183
>gi|332637217|ref|ZP_08416080.1| GTP-binding protein YsxC [Weissella cibaria KACC 11862]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ RA P D PE A +GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVEMVMSAVRASQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R +++ Y RE L G++ L+DA P K
Sbjct: 62 LNFYKVEDQIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMPSK 121
Query: 138 IDLDCANWLGRNNI--PLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ NWL ++I P+ V TK DK+ K + + +IK Q P + +
Sbjct: 122 EDIEMYNWLTSDDIGLPVLVVATKADKISRGKWNKAEADIKRGLQF----NPDVSDFEIF 177
Query: 196 SSVTGLGRDEL 206
SS T G+D +
Sbjct: 178 SSETKYGKDNV 188
>gi|407698104|ref|YP_006822892.1| GTPase [Alcanivorax dieselolei B5]
gi|407255442|gb|AFT72549.1| GTPase, putative [Alcanivorax dieselolei B5]
Length = 222
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + F+KS+ + CP D+ E A GRSN GKSS IN L ++ LA TSK PG+TQL+
Sbjct: 21 LHQAAFLKSAQIVEQCPPDEGLEVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLL 80
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +++ +VDLPGYG+AK RM W Y RE L G++LL+D P ++
Sbjct: 81 NFFTLDEQRRLVDLPGYGYAKVDKAVRMQWQEHLDDYLARRECLTGLVLLMDIRHPLREF 140
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
D W R+ +PL + TK DK+K +
Sbjct: 141 DQLMLEWSARSGMPLLILLTKADKLKFGAAK 171
>gi|340029432|ref|ZP_08665495.1| GTP-binding protein YsxC [Paracoccus sp. TRP]
Length = 216
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 96/181 (53%), Gaps = 3/181 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V+F+K P DRPE GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 27 VDFLKGVVAMDGLPAADRPEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINYF 86
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+ Y+VDLPGYGFAKAP W + K Y R +L LID+ + +D
Sbjct: 87 KLGDRAYLVDLPGYGFAKAPVAVVAKWQALLKSYLSGRPTLRRAFALIDSRHGVKDVDHQ 146
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
L R +P V TK DK+ ++ I+ Q+ ++++ P ++TSS GL
Sbjct: 147 IMQLLDRAAVPFQVVLTKADKI---TAQQLAATIEQVQEALQKHPAAFPQLVVTSSDKGL 203
Query: 202 G 202
G
Sbjct: 204 G 204
>gi|390630932|ref|ZP_10258904.1| GTP-binding protein YsxC [Weissella confusa LBAE C39-2]
gi|390483820|emb|CCF31252.1| GTP-binding protein YsxC [Weissella confusa LBAE C39-2]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ RA P D PE A +GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVEMVMSAVRASQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R +++ Y RE L G++ L+DA P K
Sbjct: 62 LNFYKVEDQIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMPSK 121
Query: 138 IDLDCANWLGRNNI--PLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
D++ NWL ++I P+ V TK DK+ K + + +IK Q P + +
Sbjct: 122 EDIEMYNWLTSDDIGLPVLVVATKADKISRGKWNKAEADIKRGLQF----NPDVSDFEIF 177
Query: 196 SSVTGLGRDEL 206
SS T G+D +
Sbjct: 178 SSETKYGKDNV 188
>gi|335357156|ref|ZP_08549026.1| GTP-binding protein [Lactobacillus animalis KCTC 3501]
Length = 197
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE S+ R + P + PE A+ GRSNVGKSSLIN L+ +K A TS +PGKTQ +
Sbjct: 3 VHNVELTISAVRPEQYPAEGYPEIALSGRSNVGKSSLINTLINRKNYARTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + Y VD+PGYG+AK R W + YF R+ L GV+ L+DA P ++
Sbjct: 63 NFYNIEDELYFVDVPGYGYAKVSKKDREKWGKMIETYFETRQELRGVISLVDARHEPTEL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D +L N+P+ V TK DK+ K + + I+ +L +E+ I+ S+V
Sbjct: 123 DCQMIEFLHYYNLPILVVGTKIDKIARGKWNKSESIIRKKLRLRKED-----KVILFSAV 177
Query: 199 TGLGRDEL 206
T G++++
Sbjct: 178 TKTGKEQI 185
>gi|313893181|ref|ZP_07826758.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442534|gb|EFR60949.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral
taxon 158 str. F0412]
Length = 222
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 106/201 (52%), Gaps = 19/201 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 16 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 75
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 76 INYFDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 135
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ + N+ I+E
Sbjct: 136 CLLIDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKADKL---TAKEKSANLAK----IKEM 188
Query: 186 YPHHPPWIMTSSVTGLGRDEL 206
YP P I+ SS+ GR+ L
Sbjct: 189 YPTDTPPILYSSLKHTGRELL 209
>gi|309805713|ref|ZP_07699753.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|329921292|ref|ZP_08277730.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
gi|308164966|gb|EFO67209.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 09V1-c]
gi|328934584|gb|EGG31088.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 1401G]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 92/147 (62%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +FV S+ K P+DD PE A+ GRSNVGKSSLINA++ ++ LA TS++PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +LVN Y VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D++ N+ NIP+ V TK DK+K
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLK 148
>gi|301300955|ref|ZP_07207120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851422|gb|EFK79141.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 196
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V S+ R + P PE A+ GRSNVGKSSLIN L+ ++ A TS +PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W+ + YF R+ L G + L+DA P +
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D +L NIP+ V TK DK+ +K + + I+ QL + + I+ S+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQLTKND-----RLILFSA 176
Query: 198 VTGLGRDEL 206
+ +G+DE+
Sbjct: 177 IDKIGKDEV 185
>gi|309804144|ref|ZP_07698222.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|309807084|ref|ZP_07701063.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|309807950|ref|ZP_07701878.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|309809256|ref|ZP_07703125.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|312873935|ref|ZP_07733971.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325911981|ref|ZP_08174383.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|349611375|ref|ZP_08890611.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
gi|308163727|gb|EFO65996.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 11V1-d]
gi|308166514|gb|EFO68714.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 03V1-b]
gi|308168801|gb|EFO70891.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LactinV 01V1-a]
gi|308170369|gb|EFO72393.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
SPIN 2503V10-D]
gi|311090484|gb|EFQ48892.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2052A-d]
gi|325476166|gb|EGC79330.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 143-D]
gi|348608697|gb|EGY58667.1| GTP-binding protein engB [Lactobacillus sp. 7_1_47FAA]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 92/147 (62%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +FV S+ K P+DD PE A+ GRSNVGKSSLINA++ ++ LA TS++PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +LVN Y VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D++ N+ NIP+ V TK DK+K
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLK 148
>gi|392940445|ref|ZP_10306089.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Thermoanaerobacter siderophilus SR4]
gi|392292195|gb|EIW00639.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Thermoanaerobacter siderophilus SR4]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 90/146 (61%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VE V+++ + PKD+ P+ I+GRSNVGKS+LIN ++ +K LA TS KPGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + ++L LLLID P +
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
D NW +P T V TK DK+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKV 147
>gi|326391011|ref|ZP_08212560.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
ethanolicus JW 200]
gi|325992956|gb|EGD51399.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter
ethanolicus JW 200]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 90/146 (61%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VE V+++ + PKD+ P+ I+GRSNVGKS+LIN ++ +K LA TS KPGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + ++L LLLID P +
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
D NW +P T V TK DK+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKV 147
>gi|81428670|ref|YP_395670.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus sakei
subsp. sakei 23K]
gi|119369209|sp|Q38WS0.1|ENGB_LACSS RecName: Full=Probable GTP-binding protein EngB
gi|78610312|emb|CAI55361.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 199
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EVE V S+ A P D PE A+ GRSNVGKSSLIN L+ +K A TS KPGKTQ
Sbjct: 2 EVHEVEMVMSAVAASQYPTDQLPEIALSGRSNVGKSSLINKLINRKSYARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y NR++L G++ LID P
Sbjct: 62 LNFYRVENELYFVDVPGYGYAKVSKKQREKFGQIIEAYLTNRDNLRGLISLIDGRHEPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ + +IP+ V TK DK+ K R +++I+E +P ++
Sbjct: 122 DDIAMYVFAKYYDIPVLVVATKMDKISTGKWNRQ-------EKIIKEALDFNPVDKFVCF 174
Query: 196 SSVTGLGRDEL 206
S++TG G+D +
Sbjct: 175 SALTGAGKDTV 185
>gi|366089338|ref|ZP_09455811.1| GTP-binding protein [Lactobacillus acidipiscis KCTC 13900]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V+ S+ R P + PE A GRSNVGKSSLINAL+ +K A TS +PGKTQ
Sbjct: 2 QVHNVDLTISAVRPNQYPTEGYPEIAFAGRSNVGKSSLINALINRKSFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R W + + Y +R+ L GV+ L+DA P K
Sbjct: 62 LNFYDVESQLFFVDVPGYGYAKVSQKERDKWGAMIETYLSSRDQLQGVVSLVDARHAPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D N L ++P+ V TK DK+K +K + IK QL + I+ S+
Sbjct: 122 LDQQMVNLLHYYDLPILVVGTKIDKVKKSKRNQSYSLIKKTLQL-----GENDELILFSA 176
Query: 198 VTGLGRDEL 206
+ G+D++
Sbjct: 177 LDKTGKDQV 185
>gi|259500683|ref|ZP_05743585.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|302191373|ref|ZP_07267627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
AB-1]
gi|312871414|ref|ZP_07731509.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|312872272|ref|ZP_07732342.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|312875467|ref|ZP_07735470.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|325912884|ref|ZP_08175262.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
gi|259168067|gb|EEW52562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
DSM 13335]
gi|311088978|gb|EFQ47419.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2053A-b]
gi|311092095|gb|EFQ50469.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 2062A-h1]
gi|311093067|gb|EFQ51416.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
LEAF 3008A-a]
gi|325477877|gb|EGC81011.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners
UPII 60-B]
Length = 195
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 92/147 (62%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +FV S+ K P+DD PE A+ GRSNVGKSSLINA++ ++ LA TS++PGKTQ
Sbjct: 2 KVNNSKFVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +LVN Y VD+PGYG+AK R + + Y R L G++LL+DA P
Sbjct: 62 LNFYLVNTDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D++ N+ NIP+ V TK DK+K
Sbjct: 122 DDINMFNYALCLNIPILVVATKIDKLK 148
>gi|119383630|ref|YP_914686.1| ribosome biogenesis GTP-binding protein YsxC [Paracoccus
denitrificans PD1222]
gi|119373397|gb|ABL68990.1| small GTP-binding protein [Paracoccus denitrificans PD1222]
Length = 216
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V+F+K P DRPE GRSN GKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 27 VDFLKGVVAMDGLPPADRPEVCFAGRSNAGKSSLINALTGRKSLARASNTPGRTQEINYF 86
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+ + Y+VDLPGYGFAKAP W + K Y R +L LID+ + +D +
Sbjct: 87 TLGERAYLVDLPGYGFAKAPVAVVAKWQALLKNYLSGRPTLRRAFTLIDSRHGVKDVDHE 146
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
L R+ +P V TK DK+ + + + Q+ ++++ +P ++TSS G
Sbjct: 147 IMKLLDRSAVPFQVVLTKADKI---GAQAMEATVAQVQEALQKHPAAYPELVITSSEKGQ 203
Query: 202 G 202
G
Sbjct: 204 G 204
>gi|188590593|ref|YP_001921995.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
E3 str. Alaska E43]
gi|238691973|sp|B2UX10.1|ENGB_CLOBA RecName: Full=Probable GTP-binding protein EngB
gi|188500874|gb|ACD54010.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43]
Length = 198
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D+R E A +GRSNVGKSSLIN+L +K+LA S PGKT+L
Sbjct: 2 RIKQSEFIISAVKPHQYPIDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y+VDLPGYG+AK + W + Y +RE L ++ L+D+ P
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W + V TK DK+K A+ ++ ++ I+ +L +++ + SS
Sbjct: 122 DDIMMYEWAKHFGYDVVIVATKSDKLKNAEFKKSEKLIRDTLKLTKDD-----KFYFYSS 176
Query: 198 VTGLGRDELL 207
+ G +EL+
Sbjct: 177 LNKKGTEELI 186
>gi|402815462|ref|ZP_10865054.1| putative GTP-binding protein EngB [Paenibacillus alvei DSM 29]
gi|402506502|gb|EJW17025.1| putative GTP-binding protein EngB [Paenibacillus alvei DSM 29]
Length = 197
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 107/189 (56%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ A P D PE + GRSNVGKSSLIN L+ +K LA TS +PGKTQ
Sbjct: 2 KITNAEFIISAVGASQYPDDGFPEIGLAGRSNVGKSSLINRLIMRKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N + Y VD+PGYG+AK R W + YF RE+L VLL++D P
Sbjct: 62 LNYYRINDNMYFVDVPGYGYAKVSKTQRAAWGRMIEAYFQERETLKLVLLVVDLRHAPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D +WL IP+ V TK D K++K P ++K + + P++M SS
Sbjct: 122 DDCMMHDWLTHYGIPVCVVATKAD--KISKNHLP-RHVKQVRTTL--GLSPDAPFVMFSS 176
Query: 198 VTGLGRDEL 206
TG GR+EL
Sbjct: 177 ETGQGREEL 185
>gi|389819477|ref|ZP_10209345.1| GTP-binding protein [Planococcus antarcticus DSM 14505]
gi|388463275|gb|EIM05639.1| GTP-binding protein [Planococcus antarcticus DSM 14505]
Length = 194
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K +A S KPGKTQ
Sbjct: 2 KVNNVELVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y +RE L V+ ++D PP K
Sbjct: 62 LNFYKIEEKLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++ IP + TK DK+ K + + +++ + + + P I+ S+
Sbjct: 122 DDIAMYEFMKHFEIPCIIIATKADKIPKGKWDKHKKIVRTTLDMDKTD-----PLIVFSA 176
Query: 198 VTGLGRDE 205
TGLG+DE
Sbjct: 177 ETGLGKDE 184
>gi|374329448|ref|YP_005079632.1| GTP-binding protein EngB [Pseudovibrio sp. FO-BEG1]
gi|359342236|gb|AEV35610.1| GTP-binding protein EngB [Pseudovibrio sp. FO-BEG1]
Length = 216
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EF+ S P D E A GRSNVGKSSLIN L KK LA TS PG+TQ++N F
Sbjct: 24 EFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRTQMLNFFG 83
Query: 83 VNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
S IVD+PGYG+A+AP W+S Y R +L V LID+ +K DLD
Sbjct: 84 TEHSMLKIVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVFSLIDSRHGIKKNDLD 143
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
L + +P V TK DK+K + +R E +++ + HP I TSS GL
Sbjct: 144 AMAILDKAAVPYQVVLTKADKLKPGQLQRMKEET---LKVLAKRPAAHPEVIATSSEKGL 200
Query: 202 GRDELLLHMSQLRNY 216
G D+L ++QL +Y
Sbjct: 201 GMDDLRAEIAQLVSY 215
>gi|326796700|ref|YP_004314520.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1]
gi|326547464|gb|ADZ92684.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1]
Length = 212
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S + F+KS+ + CP D E A GRSN GKS+ +N L +++LA TSK PG+TQ
Sbjct: 6 SVFQSAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTNQRKLARTSKTPGRTQ 65
Query: 77 LINHFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
LIN F +N + ++DLPGYGFAK P +++W + Y +NR SLVGV+L++D P
Sbjct: 66 LINCFGMNVEDRRLIDLPGYGFAKVPVAMKINWQKHMQDYLMNRRSLVGVVLVMDVRHPL 125
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
++ D+ +W N + + + TK DK+K + +K + ++EN
Sbjct: 126 KEFDVMMLDWAKSNKVQVHVLLTKSDKLKRGPAKSAALQVKKY---MKEN 172
>gi|254473683|ref|ZP_05087078.1| GTP-binding protein [Pseudovibrio sp. JE062]
gi|211957069|gb|EEA92274.1| GTP-binding protein [Pseudovibrio sp. JE062]
Length = 216
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EF+ S P D E A GRSNVGKSSLIN L KK LA TS PG+TQ++N F
Sbjct: 24 EFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRTQMLNFFG 83
Query: 83 VNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
S IVD+PGYG+A+AP W+S Y R +L V LID+ +K DLD
Sbjct: 84 AEHSMLKIVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVFSLIDSRHGIKKNDLD 143
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
L + +P V TK DK+K + +R E +++ + HP I TSS GL
Sbjct: 144 AMAILDKAAVPYQVVLTKADKLKPGQLQRMKEET---LKVLAKRPAAHPEVIATSSEKGL 200
Query: 202 GRDELLLHMSQLRNY 216
G D+L ++QL +Y
Sbjct: 201 GMDDLRAEIAQLVSY 215
>gi|259046800|ref|ZP_05737201.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
gi|259036568|gb|EEW37823.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
adiacens ATCC 49175]
Length = 199
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF S+ P D PE A+ GRSNVGKSS IN L+++K LA TS KPGKTQ
Sbjct: 2 KVNKAEFTISAVSPAQYPAGDLPEIALSGRSNVGKSSFINKLIQRKSLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+ +Y VD+PGYG+AK R W + Y R+SL VL+L+D P +
Sbjct: 62 LNFYHINELFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRQSLRLVLILVDFRHEPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
D+ +L NIP V TKCDK+
Sbjct: 122 EDVQMREFLEYYNIPYRIVMTKCDKI 147
>gi|336114567|ref|YP_004569334.1| small GTP-binding protein [Bacillus coagulans 2-6]
gi|335367997|gb|AEH53948.1| small GTP-binding protein [Bacillus coagulans 2-6]
Length = 194
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E E V S+ R + P+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTEAELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYGFAK R W + Y +R+ L V+L++D PP
Sbjct: 62 LNFYKIENKMYFVDVPGYGFAKVSKKEREKWGQMIEAYMTSRKQLKTVVLIVDVRHPPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D N+L IP V TK D K+ KG+ ++K+ ++ + N I+ SS
Sbjct: 122 DDCLMYNFLKYYKIPCIVVATKAD--KIPKGKWAS-HLKTAKETL--NLEKEDEIILFSS 176
Query: 198 VTGLGRDEL 206
TG G+D++
Sbjct: 177 ETGEGKDKV 185
>gi|317057122|ref|YP_004105589.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7]
gi|315449391|gb|ADU22955.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7]
Length = 255
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
EF+ S G+ P+ DRPEFA GRSNVGKSSLIN + +K +A S PGKT IN F
Sbjct: 29 AEFITSYGKLSQIPESDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTVTINFF 88
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE-SLVGVLLLIDASVPPQKIDL 140
V + Y VDLPGYG+A + W GY + + L V LID P K D+
Sbjct: 89 SV-EDVYFVDLPGYGYANVSKGEKKGWGDLIGGYLADFDRDLELVFQLIDMRHAPSKDDI 147
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
N+L N IP V TK DK+K + E +++F+ I Y I S+VTG
Sbjct: 148 QMINYLIDNEIPFVIVLTKADKLKPTARK---ERMEAFKDEIP--YFEDIHCIPFSAVTG 202
Query: 201 LGRDELLLHMSQLRNYW 217
G DEL + ++R W
Sbjct: 203 EGVDELKAIIEEIREDW 219
>gi|149181759|ref|ZP_01860250.1| GTP-binding protein [Bacillus sp. SG-1]
gi|148850500|gb|EDL64659.1| GTP-binding protein [Bacillus sp. SG-1]
Length = 196
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ R + P + PEFA+ GRSNVGKSS IN ++ +K +A S +PGKTQ
Sbjct: 5 KVNNVELVISAVRPEQYPGEFLPEFALAGRSNVGKSSFINRMIGRKSMARISSRPGKTQT 64
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + +S Y VD+PGYGFAK R W + Y RE L V+ ++D PP +
Sbjct: 65 LNFYKIEESLYFVDVPGYGFAKVSKKEREAWGRMIETYITMREQLKAVIQIVDLRHPPTE 124
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L N IP + TK DK+ K ++ ++K ++ + + I+ SS
Sbjct: 125 DDIMMYDFLKHNGIPCVIIATKADKIPKGKWQK---HLKVTKEAL--DIEEGDEIILFSS 179
Query: 198 VTGLGRDELLLHMSQLR 214
TGLG+D++ ++ R
Sbjct: 180 ETGLGKDQVWAALNSRR 196
>gi|408421058|ref|YP_006762472.1| GTP-binding protein EngB [Desulfobacula toluolica Tol2]
gi|405108271|emb|CCK81768.1| EngB: GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 197
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V+FVKS+ + P+ D PE A GRSNVGKSSLIN L+++K++ TS KPG TQLI
Sbjct: 3 IKTVQFVKSAVKPSQYPEYDFPEIAFAGRSNVGKSSLINTLIQRKDMVKTSSKPGCTQLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F++N+ VDLPGYG+AK R W + Y +R++L+G++LLID PQK
Sbjct: 63 NFFMINEILSFVDLPGYGYAKVSKKIRAQWQPMVELYLSHRQNLLGLILLIDIRRDPQKE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
+ D +WL ++IP + TK DK+ +K + + +L RE I+ S+
Sbjct: 123 EFDMMDWLETHDIPYLVILTKSDKL--SKTNQQKRLLSICTRLGREK----NGVILFSTK 176
Query: 199 TGLGRDELLLHMSQLRNYWDQ 219
T GRD +L + L +++
Sbjct: 177 TKQGRDTVLEEIENLMGIYNE 197
>gi|417810492|ref|ZP_12457171.1| GTPase [Lactobacillus salivarius GJ-24]
gi|335349288|gb|EGM50788.1| GTPase [Lactobacillus salivarius GJ-24]
Length = 196
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V S+ R + P PE A+ GRSNVGKSSLIN L+ ++ A TS +PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDTKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W+ + YF R+ L G + L+DA P +
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D +L NIP+ V TK DK+ +K + + I+ QL + + I+ S+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQLTKND-----RLILFSA 176
Query: 198 VTGLGRDEL 206
V G+DE+
Sbjct: 177 VDKTGKDEV 185
>gi|315924141|ref|ZP_07920367.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622543|gb|EFV02498.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 212
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + E + S+ +K P+D PE +LGRSNVGKSS +N L+R++ LA TS +PGKTQ +
Sbjct: 3 VTKAEIIISAVSSKQYPQDHLPELVLLGRSNVGKSSFVNTLIRRRNLARTSSQPGKTQTM 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N + VD+PGYG+A+ +R W + + Y RE+L GV LL+D+ P +
Sbjct: 63 NFYQINDLFRFVDMPGYGYARVSKKSREKWGAMIETYLQKRENLAGVFLLVDSRHEPSED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKS 177
D NWL + V TK DK+ + R+ NI +
Sbjct: 123 DELMFNWLTYYGLVPMVVMTKFDKLNAMRKRKALNNIAA 161
>gi|146278899|ref|YP_001169058.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17025]
gi|145557140|gb|ABP71753.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17025]
Length = 217
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+FVK + P DR E GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ S Y+VDLPGYG+A+AP W KGY R++L +LID + +D +
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGIKSVDEEI 148
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
N L R+ + V TK DK+ A+ + + + ++++ +P +MTSS GLG
Sbjct: 149 LNLLDRSAVTFQVVMTKADKVSQAE---REAVLGQVRGALKKHPAAYPELVMTSSEKGLG 205
Query: 203 RDELLLHMSQL 213
+ L ++ L
Sbjct: 206 IETLRTIIATL 216
>gi|226311385|ref|YP_002771279.1| GTP-binding protein EngB [Brevibacillus brevis NBRC 100599]
gi|226094333|dbj|BAH42775.1| probable GTP-binding protein EngB [Brevibacillus brevis NBRC
100599]
Length = 215
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EF+ S+ K P D E A++GRSNVGKSSL+N ++ +K LA S +PGKTQ
Sbjct: 2 KVTSSEFIISAVGPKQYPTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+F VN+ Y VD PGYG+AK + W +GY NR L ++ L+D P K
Sbjct: 62 LNYFRVNQMLYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNRNELRFIIQLVDIRHAPSK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ +W + +P V TK D K+A+GR ++IR+ N I+
Sbjct: 122 DDIAMYDWCKQIGLPTVVVATKGD--KIARGRWLQHT-----KIIRQSLNLRGDDTIIVF 174
Query: 196 SSVTGLGRDEL 206
SS TG G+DEL
Sbjct: 175 SSETGQGKDEL 185
>gi|442770285|gb|AGC71005.1| GTP-binding protein EngB [uncultured bacterium A1Q1_fos_2107]
Length = 193
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 81/124 (65%)
Query: 41 EFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKA 100
E A +GRSNVGKSSLINAL +K+LA SK PG+TQL+N F + +VDLPGYGFA A
Sbjct: 16 ELAFIGRSNVGKSSLINALANQKQLAKVSKTPGRTQLLNLFELRDGRTLVDLPGYGFANA 75
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
P R +W T+ Y L RE L +L+L+D + P K+D++ WL ++P + TK
Sbjct: 76 PKAARANWGRMTERYLLEREGLERILVLVDGEIGPTKLDVNMLEWLRDCDLPFAVIATKH 135
Query: 161 DKMK 164
DK+K
Sbjct: 136 DKVK 139
>gi|227890606|ref|ZP_04008411.1| GTPase [Lactobacillus salivarius ATCC 11741]
gi|417788065|ref|ZP_12435748.1| GTP-binding protein EngB [Lactobacillus salivarius NIAS840]
gi|227867544|gb|EEJ74965.1| GTPase [Lactobacillus salivarius ATCC 11741]
gi|334308242|gb|EGL99228.1| GTP-binding protein EngB [Lactobacillus salivarius NIAS840]
Length = 196
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V S+ R + P PE A+ GRSNVGKSSLIN L+ ++ A TS +PGKTQ
Sbjct: 2 QVHNVNLTISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W+ + YF R+ L G + L+DA P +
Sbjct: 62 LNFYNIEDLLYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D +L NIP+ V TK DK+ +K + + I+ QL + + I+ S+
Sbjct: 122 LDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQLTKND-----RLILFSA 176
Query: 198 VTGLGRDEL 206
V G+DE+
Sbjct: 177 VDKTGKDEV 185
>gi|303229336|ref|ZP_07316126.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-134-V-Col7a]
gi|303231340|ref|ZP_07318074.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-049-V-Sch6]
gi|302513936|gb|EFL55944.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-049-V-Sch6]
gi|302515872|gb|EFL57824.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
ACS-134-V-Col7a]
Length = 232
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNKS------------WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ + +K+
Sbjct: 146 CLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAKEKSVNLAKVKAM------- 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P IM SS+ GR+ L ++Q+
Sbjct: 199 YPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|403070279|ref|ZP_10911611.1| GTP-binding protein YsxC [Oceanobacillus sp. Ndiop]
Length = 195
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ K P D PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKAEIVISAVSKKQYPGDMLPEIALAGRSNVGKSSFINKLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N +Y VD+PGYG+AK + W + YFL RE+L VLL+ D P K
Sbjct: 62 LNFYKINDIFYFVDVPGYGYAKVSKKEKEKWGPMMEEYFLTRENLKAVLLITDLRHEPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL ++L N + + + TK D K+ K +R ++IK +Q + + I SS
Sbjct: 122 DDLRMYDFLKYNGVQVIIIGTKLD--KIPKTKRA-QHIKRTKQTFQMD--SDDILIPFSS 176
Query: 198 VTGLGRDELLLHMSQLRN 215
TG G++E +++L N
Sbjct: 177 ETGEGKEESWSVITKLIN 194
>gi|429760072|ref|ZP_19292562.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
KON]
gi|429178477|gb|EKY19755.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica
KON]
Length = 232
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNKS------------WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ + +K+
Sbjct: 146 CLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAKEKSINLAKVKAM------- 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P IM SS+ GR+ L ++Q+
Sbjct: 199 YPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|401680482|ref|ZP_10812397.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. ACP1]
gi|400218390|gb|EJO49270.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. ACP1]
Length = 232
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNKS------------WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ + +K+
Sbjct: 146 CLLIDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAKEKSINLAKVKAM------- 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP P IM SS+ GR+ L ++Q+
Sbjct: 199 YPTDSPPIMYSSLKHTGRELLQQRINQV 226
>gi|302391294|ref|YP_003827114.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
gi|302203371|gb|ADL12049.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium
arabaticum DSM 5501]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+++ S+ D P+ + PE A+ GRSNVGKSSLIN +V + A TS KPGKTQ +
Sbjct: 3 LNNVKYLCSATSPADYPRHNLPEIALAGRSNVGKSSLINQMVNRNRFAHTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + ++ + VDLPGYGFA+ PD + WS + Y +R +L GV+L++DA P
Sbjct: 63 NFYNIDNIFSFVDLPGYGFARVPDEVKDKWSEMIEEYLFHRSNLAGVILIVDARHEPTDD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL WL +P V TK DK+ ++ + + I F +L E P+ S+
Sbjct: 123 DLMMYEWLLEMQLPHLVVGTKVDKLSNSQLKPNRKQI--FDKLRLE---PQTPFTYFSAE 177
Query: 199 TGLGRDEL 206
G G++E+
Sbjct: 178 EGTGKNEV 185
>gi|359411829|ref|ZP_09204294.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
gi|357170713|gb|EHI98887.1| GTP-binding protein engB [Clostridium sp. DL-VIII]
Length = 198
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D+R E A +GRSNVGKSSLIN+L +K+LA S+ PGKT+L
Sbjct: 2 RIKKSEFITSAVKKNQYPVDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N +Y+VDLPGYG+AK + W + Y RE L V+LL+D+ P
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSKQEKDSWGKTVEMYLSGREQLKRVVLLVDSRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMT 195
D+ W+ + V TK DK+ N+K +++I E ++
Sbjct: 122 DDIIMHEWIKHFGYDVIVVATKSDKL-------TRNNLKKSEKVIMETLKLGNNDKLYFF 174
Query: 196 SSVTGLGRDELL 207
SS+ G+D+L+
Sbjct: 175 SSLNKDGKDDLI 186
>gi|344924339|ref|ZP_08777800.1| GTP-binding protein YsxC [Candidatus Odyssella thessalonicensis
L13]
Length = 220
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ EF++ + D + PE A GRSNVGKSSLINAL +K LA TS PG+TQ +N
Sbjct: 28 QSCEFIRGVQKLTDLVDFEVPEIAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQLN 87
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F + Y+VD+PGYG+A+ P +W Y R +L V +L+DA V +K D
Sbjct: 88 FFDLGGRLYLVDMPGYGYAEVPKSVVAEWRKLIDFYLRGRPTLQRVYVLLDARVEIKKHD 147
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
L+ L + + V TKCDK+ + ++ I + L++ + HP + TSS
Sbjct: 148 LEIMEQLDKAAVSYQVVLTKCDKVGPLQLKKI---ISKLEDLLQNHPAAHPTVMPTSSAK 204
Query: 200 GLGRDELLLHMSQL 213
G G +EL M+Q
Sbjct: 205 GSGIEELRAEMAQF 218
>gi|402574572|ref|YP_006623915.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus meridiei DSM 13257]
gi|402255769|gb|AFQ46044.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus meridiei DSM 13257]
Length = 204
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ E+V S+ + + P D PE A+ GRSNVGKSSLIN+ + ++ LA T PGKTQ +
Sbjct: 4 IKKAEYVASAVKYEQYPVDGLPEIAMAGRSNVGKSSLINSFLGRRNLARTGNTPGKTQTL 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +W+ VDLPGYG+AK W + Y RE L V+ ++D P
Sbjct: 64 NFYRVNDAWFFVDLPGYGYAKVAKTVNAQWGPMMENYLKKREPLRAVIQIVDIRHAPSVE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WL +P V TK D K+++G+ P +++K + P + S+
Sbjct: 124 DVEMQQWLRTMEVPTMVVATKVD--KISRGQLP-KHLKVIANALE--IPDVSLILPFSAQ 178
Query: 199 TGLGRDEL 206
TG+G+ EL
Sbjct: 179 TGVGKKEL 186
>gi|415884183|ref|ZP_11546212.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus methanolicus
MGA3]
gi|387591978|gb|EIJ84295.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus methanolicus
MGA3]
Length = 193
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E V S+ + P + PEFA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KINSAEIVISAVKPDQYPSEALPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N++++ VD+PGYG+AK R W + YF +RE L V+L++D P +
Sbjct: 62 LNFYLINEAFHFVDVPGYGYAKVSKSERAAWGEMIETYFTSREQLKAVILIVDFRHEPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP + TK DK+ K ++ + K + N + ++ SS
Sbjct: 122 DDVMMYDFLKHYEIPCIVIATKADKIPKGKWQKHLKITKE-----KLNLDQNDQIVIFSS 176
Query: 198 VTGLGRDE 205
TG G+++
Sbjct: 177 ETGEGKEK 184
>gi|150016213|ref|YP_001308467.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium
beijerinckii NCIMB 8052]
gi|189037172|sp|A6LT31.1|ENGB_CLOB8 RecName: Full=Probable GTP-binding protein EngB
gi|149902678|gb|ABR33511.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB
8052]
Length = 198
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ +F+ S+ + P D+R E A +GRSNVGKSSLIN+L +K+LA S+ PGKT+L
Sbjct: 2 RIKKSDFITSAVKKNQYPIDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N +Y+VDLPGYG+AK + W + Y RE L V+LL+D+ P
Sbjct: 62 VNFFLINDDFYLVDLPGYGYAKVSKAEKDSWGKTVEMYLTGREQLKRVVLLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ + V TK DK+ + ++ ++ IK +L ++ + SS
Sbjct: 122 DDIIMHEWIKHFGYDVIVVATKSDKLTRNELKKNEKVIKETLKLNSDDKLY-----FFSS 176
Query: 198 VTGLGRDELL 207
+ G+DEL+
Sbjct: 177 LNKDGKDELI 186
>gi|345017122|ref|YP_004819475.1| GTP-binding protein engB [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032465|gb|AEM78191.1| GTP-binding protein engB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 194
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VE V+++ + PKD+ P+ I+GRSNVGKS+LIN ++ +K LA TS KPGKT+
Sbjct: 2 KIKTVELVRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN +L+N +Y+VDLPGYG+AK + W+ + + + L LLLID P +
Sbjct: 62 INFYLINNGFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKYLRHALLLIDIRRTPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
D NW +P T V TK DK+
Sbjct: 122 DDFLMVNWFRHKELPFTVVLTKADKV 147
>gi|239616939|ref|YP_002940261.1| ribosome biogenesis GTP-binding protein YsxC [Kosmotoga olearia TBF
19.5.1]
gi|259645901|sp|C5CEL1.1|ENGB_KOSOT RecName: Full=Probable GTP-binding protein EngB
gi|239505770|gb|ACR79257.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1]
Length = 190
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 109/189 (57%), Gaps = 6/189 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+VE VK++ + D P+ + E A GRSNVGKS+L+N L ++K LA TS KPGKT+ I
Sbjct: 3 IKKVELVKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRK-LAHTSSKPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +LVN +Y VDLPGYGFA A W + YF R++L V +L+D+ P QK
Sbjct: 62 NFYLVNSKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKN 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D W+ +IP V TK DK+ G + I+ +++ ++ PP I S+
Sbjct: 122 DYKMLEWIKDYSIPFIVVLTKTDKL---SGNELKKMIQIYEKELK--LWGSPPIIPFSAK 176
Query: 199 TGLGRDELL 207
T G +ELL
Sbjct: 177 TRRGLNELL 185
>gi|126728215|ref|ZP_01744031.1| GTP-binding protein [Sagittula stellata E-37]
gi|126711180|gb|EBA10230.1| GTP-binding protein [Sagittula stellata E-37]
Length = 216
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ EV+F+K P DDR E GRSNVGKSSLINAL +K LA S PG+TQ I
Sbjct: 24 VGEVDFLKGVVAMDGLPPDDRAEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEI 83
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N+F + Y+VDLPGYGFA AP W + K Y R SL +LID + +
Sbjct: 84 NYFTLGSERYLVDLPGYGFANAPVAVVAKWQALLKAYLAGRVSLRRAFVLIDHRHGVKAV 143
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D + L R+ + V TK DK+ KG D+ ++ + + ++ +P ++TSS
Sbjct: 144 DNEIMTLLDRSAVTFQVVMTKADKV---KGAEHDKILEQVRGQLAKHPAAYPEIVVTSSE 200
Query: 199 TGLG 202
G G
Sbjct: 201 KGDG 204
>gi|238855231|ref|ZP_04645550.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 269-3]
gi|260664592|ref|ZP_05865444.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii SJ-7A-US]
gi|313471946|ref|ZP_07812438.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 1153]
gi|238832123|gb|EEQ24441.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 269-3]
gi|239529126|gb|EEQ68127.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 1153]
gi|260561657|gb|EEX27629.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii SJ-7A-US]
Length = 195
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 112/200 (56%), Gaps = 12/200 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E+ S+ R P+D PE A+ GRSNVGKSSLIN+ + +K LA TS +PGKTQ
Sbjct: 2 KITSSEYSVSAVREDQYPRDVLPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN S+Y+VD+PGYG+AK R + + Y R +L G++++IDA P
Sbjct: 62 LNFYKVNDSFYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRANLEGLIIIIDARHEPTT 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ N+ ++P+ V TK DK+K ++ + N++ L +N ++T S
Sbjct: 122 DDIAMYNYALLLDLPILVVTTKMDKLKKSQYNKVQSNLRKHLDLNHDNVT-----VLTYS 176
Query: 198 VTGLGRDELLLHMSQLRNYW 217
E LH+++L N W
Sbjct: 177 ------SETKLHLAEL-NKW 189
>gi|332686390|ref|YP_004456164.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311]
gi|379727581|ref|YP_005319766.1| GTP-binding protein EngB [Melissococcus plutonius DAT561]
gi|332370399|dbj|BAK21355.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311]
gi|376318484|dbj|BAL62271.1| GTP-binding protein EngB [Melissococcus plutonius DAT561]
Length = 193
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ P+ + PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHNAEIVISAVSPLQYPERELPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ S Y VD+PGYG+AK R W + Y +R L V+ L+D PP
Sbjct: 62 LNFYLIEDSLYFVDVPGYGYAKVSKTERAKWGKMIETYITSRNQLEAVVSLVDFRHPPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L IP+ V TK DK+ +K + + IK N+ +I+ SS
Sbjct: 122 EDKQMYDFLKYYEIPVILVATKVDKIPSSKWNKHENIIKK-----TLNFDSQDKFILFSS 176
Query: 198 VTGLGRDE 205
VT G++E
Sbjct: 177 VTKKGKEE 184
>gi|399888208|ref|ZP_10774085.1| GTP-binding protein YsxC [Clostridium arbusti SL206]
Length = 198
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + + P PE A +GRSNVGKSS+INA+ +K+L S PGKT+L
Sbjct: 2 EIKQAEFIISAVKREQFPDTGLPEVAFVGRSNVGKSSIINAITNRKKLVKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N + Y VDLPGYG+AK + +W + Y +R L V+LL+D P +
Sbjct: 62 INFFLINNNSYFVDLPGYGYAKISKEQKKEWGKMMEIYLQDRNELKKVVLLLDCRRVPNE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ NW+ V TK DK+ ++ R ++ IK N SS
Sbjct: 122 DDILMYNWITHYGYNCMIVATKSDKLNKSELVRSEKTIKHTL-----NLNQDEKISFYSS 176
Query: 198 VTGLGRDELL 207
+ +GR+ELL
Sbjct: 177 LKKVGREELL 186
>gi|373488061|ref|ZP_09578727.1| ribosome biogenesis GTP-binding protein YsxC [Holophaga foetida DSM
6591]
gi|372007835|gb|EHP08464.1| ribosome biogenesis GTP-binding protein YsxC [Holophaga foetida DSM
6591]
Length = 196
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 11/186 (5%)
Query: 19 IKEVEFVKSSGRAKD---CPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
+++ F+ S+ AK+ C E A +GRSNVGKSSL+NAL + +LA SK PG+T
Sbjct: 5 LRDAHFLTSAADAKNLGVC----FAEVAFVGRSNVGKSSLLNALAQHTQLARVSKTPGRT 60
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
+LIN F+ +IVDLPGYGFA P + W +GY R++L V +L+DA V
Sbjct: 61 RLINVFVTGPDRWIVDLPGYGFATGPVAEKAKWQEMIEGYLTGRKTLRMVYVLVDAEVGA 120
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
K+D +WL IP V TKCDK+K ++ ++ + L P W+ +
Sbjct: 121 TKLDHQMIDWLRHTEIPCRIVATKCDKVKPSRQLAQRRDVAASLML----QPTDIAWVSS 176
Query: 196 SSVTGL 201
S TG+
Sbjct: 177 SKGTGM 182
>gi|282850554|ref|ZP_06259933.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ATCC 17745]
gi|282580047|gb|EFB85451.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula
ATCC 17745]
Length = 232
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 111/208 (53%), Gaps = 19/208 (9%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I ++ S +A P+ D E A LGRSNVGKSSLIN+L + LAL S +PGKT+
Sbjct: 26 RIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKT 85
Query: 78 INHFLVNK------------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
IN+F + +W++VDLPGYGFAK R WSSF Y L+ E L+ +
Sbjct: 86 INYFDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLL 145
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LLID P ID +WL +PL V TK DK+ AK + +I I+E
Sbjct: 146 CLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKL-TAKEKSASLSI------IKEL 198
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQL 213
YP I+ SS+ GR+ L ++++
Sbjct: 199 YPTATSPILYSSLKHTGRELLQQRINKI 226
>gi|329897111|ref|ZP_08271856.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
gi|328921435|gb|EGG28824.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088]
Length = 211
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ EF+ S+ + CP D E A GRSN GKSS IN+L + K+LA TSK PG+TQL+N
Sbjct: 16 EQAEFLASAAKFHQCPADLGWEVAFAGRSNAGKSSAINSLTKNKKLARTSKTPGRTQLLN 75
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F +++ +VDLPGYGFAK P + W+ + Y R SL G++LL+D P Q D
Sbjct: 76 FFSLSEQQRLVDLPGYGFAKVPVAMKKAWTEQLETYLQERASLKGLILLMDIRHPLQPFD 135
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
NW ++P + TK DK+K R P ++ K
Sbjct: 136 EQLINWALSADMPCHILLTKADKLK----RGPQQSTK 168
>gi|421858709|ref|ZP_16290972.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410831778|dbj|GAC41409.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 207
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EF+ S+ P D PE + GRSNVGKSSLIN ++ +K LA TS +PGKTQ
Sbjct: 2 KITNAEFIISAVGPAQYPDDGLPEIGLAGRSNVGKSSLINKMMMRKNLARTSSQPGKTQQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++ +N + Y VD+PGYG+AK V R W + YF R++L VLL++D PP +
Sbjct: 62 LNYYRINDNMYFVDVPGYGYAKVSKVQRAAWGKMIEAYFRERDALRLVLLVVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D WL +P+ V TK DK+ ++ + + +++ L +N P ++ S+
Sbjct: 122 DDCMMHQWLTHYEVPVAVVATKADKVPKSRWPKHLKQVRTTLDLHADN-----PLVLFSA 176
Query: 198 VTGLGRDEL 206
TG GR EL
Sbjct: 177 ETGQGRQEL 185
>gi|410943107|ref|ZP_11374848.1| GTP-binding protein YsxC [Gluconobacter frateurii NBRC 101659]
Length = 222
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E EF S + + P RPE A GRSNVGKSS+INAL +K LA S +PG+T+ +N
Sbjct: 23 ECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQLNF 82
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F ++ +VD+PGYGFAKA + DW + Y R +L V+LL+DA + + D
Sbjct: 83 FNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKASDK 142
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPD---ENIKSFQQLIRENYPHHPPWIMTSS 197
D L R + V TKCD++ RP+ I + L ++ +P + TSS
Sbjct: 143 DVMELLDRAAVVFQIVLTKCDQV------RPNALKAKIADVEALALKHAAAYPRIVCTSS 196
Query: 198 VTGLGRDELLLHMSQLRN 215
TG G ++L +++ +
Sbjct: 197 QTGEGIEDLRAEIARFAD 214
>gi|347753004|ref|YP_004860569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
gi|347585522|gb|AEP01789.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus coagulans
36D1]
Length = 194
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E E V S+ R + P+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTEAELVISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYGFAK R W + Y +R+ L V+L++D PP
Sbjct: 62 LNFYKIENKLYFVDVPGYGFAKVSKKEREKWGRMIETYMTSRKQLKTVVLIVDVRHPPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D N+L IP V TK D K+ KG+ ++K+ ++ + N I+ SS
Sbjct: 122 DDCLMYNFLKYYKIPCIVVATKAD--KIPKGKWAS-HLKTAKETL--NLEKEDEIILFSS 176
Query: 198 VTGLGRDEL 206
TG G+D++
Sbjct: 177 ETGEGKDKV 185
>gi|407801940|ref|ZP_11148783.1| GTP-binding protein [Alcanivorax sp. W11-5]
gi|407024257|gb|EKE36001.1| GTP-binding protein [Alcanivorax sp. W11-5]
Length = 204
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+++ +F+ S+ R CP D+ E A GRSN GKSS IN L +K LA TSK PG+TQL+
Sbjct: 8 LRQTQFLTSAQRLDQCPPDEGLEVAFAGRSNAGKSSAINRLTGQKSLARTSKTPGRTQLL 67
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F V + +VDLPGYG+AK TR W GY R L G++LL+D P +
Sbjct: 68 NFFEVTEGRRLVDLPGYGYAKVDRATRQQWQKELDGYLAERRCLRGLVLLMDIRHPLKDF 127
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D +W +PL + TK DK+ + + + S + +P + SS
Sbjct: 128 DRMLVDWSAEAGMPLHLLLTKADKLSFGQAKTTVMKVASSLK----GHPAPLTAQLFSST 183
Query: 199 TGLGRDE 205
+G G D+
Sbjct: 184 SGAGCDD 190
>gi|157273342|gb|ABV27241.1| GTP-binding protein [Candidatus Chloracidobacterium thermophilum]
Length = 201
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ F+KS+ A D P PE A LGRSNVGKSSLIN+L+ + LA TS PG+TQL
Sbjct: 2 KVVAATFLKSATVAADYPPPTLPEVAFLGRSNVGKSSLINSLLGVRGLARTSNTPGRTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N+ VDLPGYG+A+ P R W + Y +R +L +L++D + PQ
Sbjct: 62 INFFEINRELRFVDLPGYGYARVPQKIRERWRPMIESYLYHRSALALCVLIVDVRLAPQP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D WL + P V TK DK+ + S ++R Y P + SS
Sbjct: 122 LDRTMYEWLVATSRPFCLVATKADKLS-------RSQLLSQLSVLRAAY--GPDVLPYSS 172
Query: 198 VTGLGRDEL 206
+T G D++
Sbjct: 173 LTRAGADQV 181
>gi|152976884|ref|YP_001376401.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cytotoxicus
NVH 391-98]
gi|189037170|sp|A7GTE8.1|ENGB_BACCN RecName: Full=Probable GTP-binding protein EngB
gi|152025636|gb|ABS23406.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98]
Length = 198
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ R P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKAEIVISAVRPDQYPGGDLPEIALAGRSNVGKSSFINTILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F++N + VD+PGYG+AK R W + YF RE L +L+ID PP K
Sbjct: 62 LNFFIINDMMHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDATVLVIDLRHPPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP + TK DK+ K ++ ++K ++ + + ++ SS
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKIPKGKWQK---HLKVVKETL--DVEAGDEVVLFSS 176
Query: 198 VTGLGRDE 205
TGLG++E
Sbjct: 177 ETGLGKEE 184
>gi|430819913|ref|ZP_19438557.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0045]
gi|430822581|ref|ZP_19441159.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0120]
gi|430865141|ref|ZP_19480899.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1574]
gi|431743074|ref|ZP_19531955.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2071]
gi|431764162|ref|ZP_19552705.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4215]
gi|430440116|gb|ELA50393.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0045]
gi|430443158|gb|ELA53155.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0120]
gi|430553219|gb|ELA92920.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1574]
gi|430607438|gb|ELB44758.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2071]
gi|430631347|gb|ELB67669.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4215]
Length = 195
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 103/195 (52%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y R+ L V+ L+D P +
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK R + +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALDFDRND-----TFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|89068161|ref|ZP_01155578.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
gi|89046400|gb|EAR52457.1| GTP-binding protein [Oceanicola granulosus HTCC2516]
Length = 218
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV FVK P DRPE GRSNVGKS+LINAL +K LA S PG+TQ IN+
Sbjct: 28 EVTFVKGVVAMSGLPGADRPEVCFAGRSNVGKSTLINALTGRKALARASNTPGRTQEINY 87
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + S Y+VDLPGYGFA AP W + K Y R++L +LIDA + +D
Sbjct: 88 FALADSHYLVDLPGYGFANAPVAVVAKWQALLKQYLQGRQTLRRAFVLIDARHGAKAVDE 147
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L + V TK DK+K ++ R + +++ + + +P ++TSS G
Sbjct: 148 EIMALLDSAAVTFQCVLTKADKIKASERDRVLDQVRA---TLARHPAAYPEIVLTSSEKG 204
Query: 201 LGRDEL 206
G + L
Sbjct: 205 DGIETL 210
>gi|69246839|ref|ZP_00604148.1| GTP-binding protein [Enterococcus faecium DO]
gi|257878468|ref|ZP_05658121.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257882890|ref|ZP_05662543.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257889332|ref|ZP_05668985.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257894345|ref|ZP_05673998.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260560057|ref|ZP_05832235.1| GTP-binding protein [Enterococcus faecium C68]
gi|261207454|ref|ZP_05922140.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289565865|ref|ZP_06446306.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
D344SRF]
gi|293559816|ref|ZP_06676334.1| GTP-binding protein [Enterococcus faecium E1162]
gi|293568081|ref|ZP_06679418.1| GTP-binding protein [Enterococcus faecium E1071]
gi|294617406|ref|ZP_06697040.1| GTP-binding protein [Enterococcus faecium E1679]
gi|294623405|ref|ZP_06702261.1| GTP-binding protein [Enterococcus faecium U0317]
gi|314939703|ref|ZP_07846927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a04]
gi|314942231|ref|ZP_07849083.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133C]
gi|314948864|ref|ZP_07852234.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0082]
gi|314950806|ref|ZP_07853878.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133A]
gi|314993229|ref|ZP_07858608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133B]
gi|314995228|ref|ZP_07860341.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a01]
gi|383328982|ref|YP_005354866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
Aus0004]
gi|389868800|ref|YP_006376223.1| GTP-binding protein [Enterococcus faecium DO]
gi|415899099|ref|ZP_11551516.1| GTP-binding protein [Enterococcus faecium E4453]
gi|416136839|ref|ZP_11598777.1| GTP-binding protein [Enterococcus faecium E4452]
gi|424786777|ref|ZP_18213557.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
V689]
gi|424802703|ref|ZP_18228177.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
S447]
gi|424825911|ref|ZP_18250862.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R501]
gi|424852848|ref|ZP_18277233.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R499]
gi|424869042|ref|ZP_18292765.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R497]
gi|424938815|ref|ZP_18354579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R496]
gi|424953932|ref|ZP_18368860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R494]
gi|424958953|ref|ZP_18373568.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R446]
gi|424959230|ref|ZP_18373830.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1986]
gi|424965980|ref|ZP_18379852.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1190]
gi|424968749|ref|ZP_18382352.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1140]
gi|424971518|ref|ZP_18384948.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1139]
gi|424973243|ref|ZP_18386532.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1137]
gi|424978260|ref|ZP_18391203.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1123]
gi|424980438|ref|ZP_18393233.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV99]
gi|424985480|ref|ZP_18397954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV69]
gi|424986794|ref|ZP_18399198.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV38]
gi|424989817|ref|ZP_18402069.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV26]
gi|424995122|ref|ZP_18407020.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV168]
gi|424998648|ref|ZP_18410319.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV165]
gi|425000177|ref|ZP_18411755.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV161]
gi|425005955|ref|ZP_18417152.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV102]
gi|425006509|ref|ZP_18417681.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV1]
gi|425010569|ref|ZP_18421509.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E422]
gi|425015124|ref|ZP_18425765.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E417]
gi|425016878|ref|ZP_18427419.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C621]
gi|425020516|ref|ZP_18430819.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C497]
gi|425027858|ref|ZP_18435110.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C1904]
gi|425030758|ref|ZP_18435919.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
515]
gi|425037123|ref|ZP_18441809.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
514]
gi|425037974|ref|ZP_18442608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
513]
gi|425043366|ref|ZP_18447607.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
511]
gi|425046467|ref|ZP_18450481.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
510]
gi|425048862|ref|ZP_18452744.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
509]
gi|425051886|ref|ZP_18455526.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
506]
gi|425059761|ref|ZP_18463082.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
503]
gi|427396228|ref|ZP_18888987.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus durans
FB129-CNAB-4]
gi|430825540|ref|ZP_19443744.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0164]
gi|430827670|ref|ZP_19445802.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0269]
gi|430830754|ref|ZP_19448810.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0333]
gi|430833039|ref|ZP_19451052.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0679]
gi|430843990|ref|ZP_19461888.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1050]
gi|430845991|ref|ZP_19463856.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1133]
gi|430851716|ref|ZP_19469451.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1258]
gi|430854864|ref|ZP_19472576.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1392]
gi|430860252|ref|ZP_19477856.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1573]
gi|430871327|ref|ZP_19483719.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1575]
gi|430949097|ref|ZP_19486016.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1576]
gi|431005417|ref|ZP_19489063.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1578]
gi|431146192|ref|ZP_19499089.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1620]
gi|431229832|ref|ZP_19502035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1622]
gi|431252331|ref|ZP_19504389.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1623]
gi|431293391|ref|ZP_19506859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1626]
gi|431370184|ref|ZP_19509883.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1627]
gi|431412500|ref|ZP_19511935.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1630]
gi|431541950|ref|ZP_19518179.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1731]
gi|431658069|ref|ZP_19523869.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1904]
gi|431746229|ref|ZP_19535063.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2134]
gi|431750068|ref|ZP_19538795.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2297]
gi|431754866|ref|ZP_19543526.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2883]
gi|431759388|ref|ZP_19548002.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3346]
gi|431767242|ref|ZP_19555697.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1321]
gi|431770866|ref|ZP_19559262.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1644]
gi|431772321|ref|ZP_19560662.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2369]
gi|431775736|ref|ZP_19564006.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2560]
gi|431778832|ref|ZP_19567038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4389]
gi|431781852|ref|ZP_19569992.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6012]
gi|431785771|ref|ZP_19573794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6045]
gi|447912524|ref|YP_007393936.1| GTP-binding protein EngB [Enterococcus faecium NRRL B-2354]
gi|68195072|gb|EAN09534.1| GTP-binding protein [Enterococcus faecium DO]
gi|257812696|gb|EEV41454.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257818548|gb|EEV45876.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257825692|gb|EEV52318.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257830724|gb|EEV57331.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260073892|gb|EEW62216.1| GTP-binding protein [Enterococcus faecium C68]
gi|260078345|gb|EEW66050.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289162325|gb|EFD10184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
D344SRF]
gi|291589163|gb|EFF20974.1| GTP-binding protein [Enterococcus faecium E1071]
gi|291596312|gb|EFF27571.1| GTP-binding protein [Enterococcus faecium E1679]
gi|291597171|gb|EFF28366.1| GTP-binding protein [Enterococcus faecium U0317]
gi|291606235|gb|EFF35651.1| GTP-binding protein [Enterococcus faecium E1162]
gi|313590558|gb|EFR69403.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a01]
gi|313592284|gb|EFR71129.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133B]
gi|313597021|gb|EFR75866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133A]
gi|313599003|gb|EFR77848.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133C]
gi|313641038|gb|EFS05618.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0133a04]
gi|313644737|gb|EFS09317.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
TX0082]
gi|364089638|gb|EHM32307.1| GTP-binding protein [Enterococcus faecium E4453]
gi|364091664|gb|EHM34108.1| GTP-binding protein [Enterococcus faecium E4452]
gi|378938676|gb|AFC63748.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
Aus0004]
gi|388534049|gb|AFK59241.1| GTP-binding protein [Enterococcus faecium DO]
gi|402919318|gb|EJX39927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
S447]
gi|402923293|gb|EJX43597.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
V689]
gi|402924904|gb|EJX45087.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R501]
gi|402933043|gb|EJX52503.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R499]
gi|402936027|gb|EJX55226.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R496]
gi|402936097|gb|EJX55295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R497]
gi|402937926|gb|EJX56982.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R494]
gi|402938359|gb|EJX57374.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
R446]
gi|402942060|gb|EJX60694.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1190]
gi|402950850|gb|EJX68824.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1140]
gi|402951100|gb|EJX69052.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1986]
gi|402958727|gb|EJX76026.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1139]
gi|402959088|gb|EJX76366.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1137]
gi|402962756|gb|EJX79669.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
P1123]
gi|402965915|gb|EJX82596.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV69]
gi|402966555|gb|EJX83179.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV99]
gi|402975789|gb|EJX91722.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV38]
gi|402978172|gb|EJX93934.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV168]
gi|402981008|gb|EJX96564.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV26]
gi|402982347|gb|EJX97817.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV165]
gi|402984474|gb|EJX99782.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV102]
gi|402989788|gb|EJY04695.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV161]
gi|402996791|gb|EJY11155.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E417]
gi|402997041|gb|EJY11391.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
ERV1]
gi|402999285|gb|EJY13482.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E422]
gi|403005102|gb|EJY18850.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C1904]
gi|403005956|gb|EJY19633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C621]
gi|403009095|gb|EJY22563.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
C497]
gi|403012027|gb|EJY25295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
514]
gi|403016988|gb|EJY29769.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
515]
gi|403020092|gb|EJY32651.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
511]
gi|403020467|gb|EJY33005.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
513]
gi|403024197|gb|EJY36372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
510]
gi|403029680|gb|EJY41423.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
509]
gi|403036446|gb|EJY47795.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
506]
gi|403043316|gb|EJY54235.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
503]
gi|425722898|gb|EKU85789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus durans
FB129-CNAB-4]
gi|430446005|gb|ELA55704.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0164]
gi|430482343|gb|ELA59461.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0333]
gi|430484272|gb|ELA61293.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0269]
gi|430486494|gb|ELA63330.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E0679]
gi|430496580|gb|ELA72639.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1050]
gi|430539811|gb|ELA80050.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1133]
gi|430542298|gb|ELA82406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1258]
gi|430547743|gb|ELA87659.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1392]
gi|430552689|gb|ELA92417.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1573]
gi|430557942|gb|ELA97378.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1576]
gi|430558025|gb|ELA97459.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1575]
gi|430561450|gb|ELB00718.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1578]
gi|430573818|gb|ELB12596.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1622]
gi|430575732|gb|ELB14429.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1620]
gi|430578757|gb|ELB17309.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1623]
gi|430582028|gb|ELB20463.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1626]
gi|430583931|gb|ELB22289.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1627]
gi|430589455|gb|ELB27583.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1630]
gi|430592997|gb|ELB30984.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1731]
gi|430600429|gb|ELB38074.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1904]
gi|430608998|gb|ELB46204.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2134]
gi|430610541|gb|ELB47685.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2297]
gi|430618694|gb|ELB55535.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2883]
gi|430626188|gb|ELB62774.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E3346]
gi|430631250|gb|ELB67573.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1321]
gi|430634515|gb|ELB70634.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E1644]
gi|430638009|gb|ELB73990.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2369]
gi|430642384|gb|ELB78162.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E2560]
gi|430643493|gb|ELB79232.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E4389]
gi|430646930|gb|ELB82391.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6045]
gi|430648253|gb|ELB83660.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium
E6012]
gi|445188233|gb|AGE29875.1| GTP-binding protein EngB [Enterococcus faecium NRRL B-2354]
Length = 195
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 103/195 (52%), Gaps = 5/195 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + S+ K P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHQAEIIISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y R+ L V+ L+D P +
Sbjct: 62 LNFYLIENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK R + +I+ SS
Sbjct: 122 EDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALDFDRND-----TFILFSS 176
Query: 198 VTGLGRDELLLHMSQ 212
VT G++E + Q
Sbjct: 177 VTKQGKEEAWAAIEQ 191
>gi|384917732|ref|ZP_10017842.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
gi|384468373|gb|EIE52808.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. 357]
Length = 217
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V+F+K + P DDRPE GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 28 VDFLKGVVAMEGLPPDDRPEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYF 87
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
L+ S Y+VDLPGYGFA AP W K Y R SL +LIDA + +D +
Sbjct: 88 LLGDSGYLVDLPGYGFANAPLPVVEKWQRLLKHYLSGRASLRRAFVLIDARHGIKAVDEE 147
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW----IMTSS 197
L R+ + V TK DK++ D + +R+ HP ++TSS
Sbjct: 148 IMTLLDRSAVTFQAVLTKIDKIR-------DSERDTVLTQVRDRLSRHPAAYPEIVLTSS 200
Query: 198 VTGLG 202
G G
Sbjct: 201 EKGEG 205
>gi|187935182|ref|YP_001887073.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum
B str. Eklund 17B]
gi|238691648|sp|B2TPB6.1|ENGB_CLOBB RecName: Full=Probable GTP-binding protein EngB
gi|187723335|gb|ACD24556.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B]
Length = 198
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D R E A +GRSNVGKSSLIN+L +K+LA S PGKT+L
Sbjct: 2 RIKQSEFIISAVKPHQYPIDHRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y+VDLPGYG+AK + W + Y +RE L ++ L+D+ P
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ W + V TK DK+K A+ ++ ++LIRE N
Sbjct: 122 DDIMMYEWAKHFGYDVVVVATKSDKLKNAEFKKS-------EKLIRETLNLTKDDKLYFY 174
Query: 196 SSVTGLGRDELL 207
SS+ G +EL+
Sbjct: 175 SSLNKKGTEELI 186
>gi|328957598|ref|YP_004374984.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp.
17-4]
gi|328673922|gb|AEB29968.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp.
17-4]
Length = 195
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ P PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVNKADIVISAVSPAQYPNTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++++ ++Y VD+PGYG+AK R W + YF R++L L ++D PP +
Sbjct: 62 LNYYIIEDTFYFVDVPGYGYAKVSKTERAKWGQMLETYFTQRDTLKAALSVVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L ++IP+ + TK DK+ +K + + +K L E+ +++ SS
Sbjct: 122 DDVQMYEFLKYHSIPVIVIATKADKIPRSKWNKHIKVVKDKLNLREED-----EFVLFSS 176
Query: 198 VTGLGRDE 205
TG G+D+
Sbjct: 177 ETGEGKDK 184
>gi|307546852|ref|YP_003899331.1| GTPase EngB [Halomonas elongata DSM 2581]
gi|307218876|emb|CBV44146.1| GTPase EngB [Halomonas elongata DSM 2581]
Length = 206
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ CP D E A GRSN GKSS IN L R+K LA TSK PG+TQLIN
Sbjct: 7 QAARFLTSAPTLAQCPADTGAEVAFAGRSNAGKSSAINVLTRQKALARTSKTPGRTQLIN 66
Query: 80 HFLV--NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
F + + +VDLPGYG+AK PD +++W Y R SL G++LL+D P +
Sbjct: 67 FFTLGDDTELRLVDLPGYGYAKVPDSVKLEWQRHLADYLQRRTSLRGLVLLMDVRHPLTE 126
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKS 177
D W ++P+ + TK DK+K + + ++S
Sbjct: 127 FDQTMLGWADEQDMPVHILLTKADKLKSGAAKNALQQVRS 166
>gi|414341261|ref|YP_006982782.1| protein EngB [Gluconobacter oxydans H24]
gi|411026596|gb|AFV99850.1| EngB [Gluconobacter oxydans H24]
gi|453330535|dbj|GAC87281.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
thailandicus NBRC 3255]
Length = 222
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E EF S + + P RPE A GRSNVGKSS+INAL +K LA S +PG+T+ +N
Sbjct: 23 ECEFFFGSQKIEQLPPVGRPEVAFAGRSNVGKSSIINALTGRKALARASSEPGRTKQLNF 82
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F ++ +VD+PGYGFAKA + DW + Y R +L V+LL+DA + + D
Sbjct: 83 FNLSDRISLVDMPGYGFAKAAKSVKEDWQNMMFAYLRGRTTLARVILLLDARIELKASDK 142
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
D L R + V TKCD+++ + I + L ++ +P + TSS TG
Sbjct: 143 DVMELLDRAAVVFQIVLTKCDQVRPTALK---AKIAEVEALALKHAAAYPRIVCTSSQTG 199
Query: 201 LGRDELLLHMSQLRN 215
G ++L +++ +
Sbjct: 200 EGIEDLRAEIARFAD 214
>gi|427392473|ref|ZP_18886478.1| ribosome biogenesis GTP-binding protein YsxC [Alloiococcus otitis
ATCC 51267]
gi|425731434|gb|EKU94252.1| ribosome biogenesis GTP-binding protein YsxC [Alloiococcus otitis
ATCC 51267]
Length = 201
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
+ I++ + + S+ P PE A+ GRSNVGKSS IN++V +K+LA TS KPGKT+
Sbjct: 4 NHIQKADILISAVSQDQYPDQGLPEVALAGRSNVGKSSFINSMVNRKKLAHTSSKPGKTR 63
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
+N + V +VD+PGYGFAK + W++ + YF +RESLV V+ L+D P
Sbjct: 64 TLNFYQVENELLLVDVPGYGFAKVSKAEQNRWAAMMEEYFASRESLVLVIQLVDFRHKPS 123
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
++D+ +L N+P+ V TK DK+K +K D+ I+ Q + N +++ S
Sbjct: 124 QLDIQMYEYLSHFNLPVLVVATKADKVKPSKR---DKQIQDITQAL--NLYDGDQFMVYS 178
Query: 197 SVTGLGRDE 205
+ + GRD+
Sbjct: 179 AESKEGRDQ 187
>gi|408356356|ref|YP_006844887.1| GTPase [Amphibacillus xylanus NBRC 15112]
gi|407727127|dbj|BAM47125.1| GTPase [Amphibacillus xylanus NBRC 15112]
Length = 194
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + EF S+ P ++ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTQSEFTISAVSPNQYPTENLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++L+N+ +Y VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNYYLINEFFYFVDVPGYGYAKVSKTEREAWGKMMETYFSEREPLRATILVVDIRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ ++L +IP+ + TK DK+K
Sbjct: 122 DDVMMYDFLKHYDIPVIIIATKLDKIK 148
>gi|341820108|emb|CCC56340.1| GTPase [Weissella thailandensis fsh4-2]
Length = 208
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +VE V S+ R P DD PE A +GRSNVGKSS N L+ +K A TS +PGKTQ
Sbjct: 2 EVHQVEIVMSAVRESQYPTDDLPEVAFVGRSNVGKSSFTNVLINRKSFARTSAQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R D++ Y R+ L G++ L+DA P K
Sbjct: 62 LNFYKVENQVFFVDVPGYGYAKVSKKAREDFAVMIGEYLRKRQPLKGIVQLVDARHLPSK 121
Query: 138 IDLDCANWLGRNNI--PLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE 184
D++ NWL ++I P+ V TK DK+ K + + +IK Q E
Sbjct: 122 EDIEMYNWLISDDIGLPVLVVATKADKISRGKWNKVEADIKRSLQFNEE 170
>gi|159042882|ref|YP_001531676.1| ribosome biogenesis GTP-binding protein YsxC [Dinoroseobacter
shibae DFL 12]
gi|157910642|gb|ABV92075.1| GTP-binding protein [Dinoroseobacter shibae DFL 12]
Length = 217
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV F+K P DR E GRSNVGKSSLINAL +K LA TS PG+TQ IN+
Sbjct: 27 EVTFLKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARTSNTPGRTQEINY 86
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + + Y+VD+PGYGFA+AP W + K Y R +L +LIDA + +D
Sbjct: 87 FCLGEDRYLVDVPGYGFAEAPVAVVQKWQALLKAYLTGRPTLRRAFVLIDARHGIKAVDH 146
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH---HPPWIMTSS 197
+ + L + V TK DK+K A E K+ Q+ +E H P ++TSS
Sbjct: 147 EIMSLLDTAAVTFQVVLTKADKIKTA------EQDKTLAQVRKELARHPAAFPELLLTSS 200
Query: 198 VTGLGRDEL 206
G G + L
Sbjct: 201 AKGDGIETL 209
>gi|377557321|ref|ZP_09786971.1| Putative GTP-binding protein engB [Lactobacillus gastricus PS3]
gi|376165727|gb|EHS84668.1| Putative GTP-binding protein engB [Lactobacillus gastricus PS3]
Length = 197
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 84/147 (57%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ EVE S+ +A+ P + PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 QVHEVELTISAVKAEQYPATNYPEIALVGRSNVGKSSLTNVLINRKNYAHTSGQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y RE L GV+ LID P +
Sbjct: 62 LNFYEVEHQLYFVDVPGYGYAKVSKKQREQFGKMIEHYLTEREQLRGVVQLIDGRHAPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ WL IP V TK DK+K
Sbjct: 122 DDVMMYQWLAYYQIPTLVVATKIDKVK 148
>gi|304311551|ref|YP_003811149.1| GTP-binding protein [gamma proteobacterium HdN1]
gi|301797284|emb|CBL45504.1| GTP-binding protein [gamma proteobacterium HdN1]
Length = 236
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ +F+ S+ + CP D+ E A GRSN GKSS IN + ++ +LA TSK PG+TQL+
Sbjct: 38 FRHTQFLTSAAKLSQCPPDEGREVAFAGRSNAGKSSAINRITQQSKLARTSKTPGRTQLL 97
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F V+ +VDLPGYG+A+ P+ +++W Y NR SLVGV+L++D P +
Sbjct: 98 NFFSVDDHKRLVDLPGYGYAEVPEALKVEWQRHLTEYLENRVSLVGVILIMDVRHPLKPF 157
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D +W PL + TK DK+ G++ +K
Sbjct: 158 DQMMLDWARAYQFPLHILLTKADKLSRNAGQKSLAEVK 195
>gi|163791245|ref|ZP_02185661.1| GTP-binding protein [Carnobacterium sp. AT7]
gi|159873515|gb|EDP67603.1| GTP-binding protein [Carnobacterium sp. AT7]
Length = 195
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ P PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVNKADIVISAVSPAQYPSTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N++++ S+Y VD+PGYG+AK R W + YF RE+L L ++D PP +
Sbjct: 62 LNYYIIEDSFYFVDVPGYGYAKVSKTERAKWGQMLEVYFTQRETLKVALSVVDLRHPPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L ++IP+ V TK DK+ K + + +K + E++ +++ SS
Sbjct: 122 DDVQMYEFLKYHSIPVIVVATKADKIPRGKWNKHIKIVKDKLNIREEDH-----FVLFSS 176
Query: 198 VTGLGRDE 205
TG G+++
Sbjct: 177 ETGEGKEQ 184
>gi|23099530|ref|NP_692996.1| ribosome biogenesis GTP-binding protein YsxC [Oceanobacillus
iheyensis HTE831]
gi|81846051|sp|Q8EPM2.1|ENGB_OCEIH RecName: Full=Probable GTP-binding protein EngB
gi|22777760|dbj|BAC14031.1| GTP-binding protein (EngB family) [Oceanobacillus iheyensis HTE831]
Length = 195
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ K P+D PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVNHAEIVISAVSKKQYPEDQLPEIALAGRSNVGKSSFINRLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+S+Y VD+PGYG+AK R W + YF R++L V+L+ D P +
Sbjct: 62 LNFYRINESFYFVDVPGYGYAKVSKKEREKWGRMMEEYFQTRDTLRAVVLVTDLRHDPTQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +++ ++P+ + TK D K+ K +R ++ Q L + P+ S+
Sbjct: 122 DDIQMYDFIKYFDLPVIIIGTKLD--KITKNKRQKHINRAKQVLEMDETDLFIPF---SA 176
Query: 198 VTGLGRDE 205
G G+DE
Sbjct: 177 EIGEGKDE 184
>gi|189423527|ref|YP_001950704.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter lovleyi SZ]
gi|238692100|sp|B3E2D1.1|ENGB_GEOLS RecName: Full=Probable GTP-binding protein EngB
gi|189419786|gb|ACD94184.1| small GTP-binding protein [Geobacter lovleyi SZ]
Length = 200
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I + F+KS+ + D P D PE A GRSNVGKSSLIN +V +K L TS PG+TQL
Sbjct: 2 HIHQTTFIKSAVKPADYPPVDLPEIAFAGRSNVGKSSLINVIVERKALVRTSSTPGRTQL 61
Query: 78 INHFLVNK---SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
IN F V S +VDLPGYG+AK P + W + Y RESL GV+L++D
Sbjct: 62 INFFQVTGVPFSLNLVDLPGYGYAKVPLDVKRQWGPMMERYLSGRESLRGVVLILDIRRI 121
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
P + DL NWL V TKCDK+ + R I + ++ + H
Sbjct: 122 PSEEDLQMLNWLRSYKRRPIIVLTKCDKVTKNERARQTAAIAARLEMDKSQLIHF----- 176
Query: 195 TSSVTGLGRDEL 206
S+++ GRD +
Sbjct: 177 -SALSKDGRDTV 187
>gi|89895940|ref|YP_519427.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense Y51]
gi|219670373|ref|YP_002460808.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DCB-2]
gi|423076881|ref|ZP_17065589.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
gi|119369191|sp|Q24SK9.1|ENGB_DESHY RecName: Full=Probable GTP-binding protein EngB
gi|254783194|sp|B8FVH0.1|ENGB_DESHD RecName: Full=Probable GTP-binding protein EngB
gi|89335388|dbj|BAE84983.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540633|gb|ACL22372.1| small GTP-binding protein domain protein [Desulfitobacterium
hafniense DCB-2]
gi|361851833|gb|EHL04121.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium
hafniense DP7]
Length = 201
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ EFV S+ K P+ PE A+ GRSNVGKSSLIN + ++ LA T PGKTQ++
Sbjct: 4 IRKAEFVTSAVNIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N W VDLPGYG+AK + +W + YF RE+L V+ ++D P
Sbjct: 64 NFYRINDQWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW---IMT 195
D + +L IP+ V TK D K++KG+ K Q+ + H P W I
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKAD--KISKGQWG----KHLSQIAKA--LHIPDWHIIITY 175
Query: 196 SSVTGLGRDEL 206
S+ TGLG EL
Sbjct: 176 SAETGLGVPEL 186
>gi|229918355|ref|YP_002887001.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sp.
AT1b]
gi|259645896|sp|C4L4J3.1|ENGB_EXISA RecName: Full=Probable GTP-binding protein EngB
gi|229469784|gb|ACQ71556.1| small GTP-binding protein [Exiguobacterium sp. AT1b]
Length = 197
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + EFV S+ P + PE A+ GRSNVGKSS IN + ++K LA TS KPGKTQ
Sbjct: 2 KINKAEFVTSAVAPDHYPVHELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F +N VD+PGYG+AK R W + Y ++E+L GV+LL+D P
Sbjct: 62 LNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ N+L IP+ V TK DK+K ++ ++ + +K Q + ++ S+
Sbjct: 122 DDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQ-----FDPSDRFVAFSA 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETAEGKDE 184
>gi|182417604|ref|ZP_02948926.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237668408|ref|ZP_04528392.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182378559|gb|EDT76088.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237656756|gb|EEP54312.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 198
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 101/168 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + + P D+R E A +GRSNVGKSS+IN+L +K+LA S PGKT+L
Sbjct: 2 RIKQSEFIISAVKREQYPLDNRNEVAFVGRSNVGKSSIINSLTNRKKLAKVSGTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N +Y+VDLPGYG+AK + W + Y RE L ++LL+D+ P
Sbjct: 62 VNFFLINNDFYLVDLPGYGYAKVSKSEKDSWGKTIEMYLTEREQLKRIVLLVDSRHKPTG 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ W + V TK DK+K ++ ++ ++ IK +L E+
Sbjct: 122 DDILMYEWAKHFGYDVVVVATKSDKLKNSEFKKNEKIIKETLKLKEED 169
>gi|77464647|ref|YP_354151.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides 2.4.1]
gi|119369248|sp|Q3IYY4.1|ENGB_RHOS4 RecName: Full=Probable GTP-binding protein EngB
gi|77389065|gb|ABA80250.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 217
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 3/184 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+FVK + P DR E GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ S Y+VDLPGYG+A+AP W KGY R++L +LID + +D +
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVQRWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
L R+ + V TK DK+ A+ + + + ++++ +P +MTSS G+G
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAER---EAVLDQVRGALKKHPAAYPELVMTSSEKGMG 205
Query: 203 RDEL 206
+ L
Sbjct: 206 IETL 209
>gi|162447399|ref|YP_001620531.1| GTPase [Acholeplasma laidlawii PG-8A]
gi|229807530|sp|A9NFM5.1|ENGB_ACHLI RecName: Full=Probable GTP-binding protein EngB
gi|161985506|gb|ABX81155.1| GTPase, YihA subfamily [Acholeplasma laidlawii PG-8A]
Length = 191
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 7/189 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF+ S+ D PKDD F ILGRSNVGKSSLINA+ +K+LA S+ PGKT +
Sbjct: 3 IKQAEFITSAVSITDLPKDDFDHFLILGRSNVGKSSLINAITNRKKLARVSQTPGKTITL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+N+S Y+VD PGYG+AK + + Y L ++LL+D ++ P +
Sbjct: 63 NLYLLNQSLYLVDAPGYGYAKRSKTQTLTFMRMINEYIQLNGHLKKIILLVDFNIGPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DLD L ++ + V TK DK+K + + +++IR + TSS
Sbjct: 123 DLDMYIELQAFDVDIIVVTTKYDKVKSSHRLKQ-------EKVIRSKFFEGQKIYFTSSE 175
Query: 199 TGLGRDELL 207
T G D+L+
Sbjct: 176 TKFGIDKLI 184
>gi|58040259|ref|YP_192223.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter oxydans
621H]
gi|81556980|sp|Q5FPX9.1|ENGB_GLUOX RecName: Full=Probable GTP-binding protein EngB
gi|58002673|gb|AAW61567.1| Probable GTP-binding protein EngB [Gluconobacter oxydans 621H]
Length = 227
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E EF S + P RPE A GRSNVGKSS+INAL ++ LA S +PG+T+ +N
Sbjct: 24 ECEFFFGSQKIDQLPPVGRPEVAFAGRSNVGKSSIINALTGRRALARASSEPGRTKQLNF 83
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + +VD+PGYGFAKA + DW Y R +L V+LL+DA + + D
Sbjct: 84 FNLADRLSLVDMPGYGFAKAAKSVKEDWQDMMFAYLRGRTTLERVILLLDARIELKASDK 143
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
D L R + V TKCD++K + I + L ++ +P I TSS TG
Sbjct: 144 DVMELLDRAAVVFQIVLTKCDQVKP---KALAAKIAEVEALALKHAAAYPRIIATSSETG 200
Query: 201 LGRDELLLHMSQL 213
G ++L +++
Sbjct: 201 FGIEDLRAEIARF 213
>gi|78186100|ref|YP_374143.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium luteolum
DSM 273]
gi|119369228|sp|Q3B6D1.1|ENGB_PELLD RecName: Full=Probable GTP-binding protein EngB
gi|78166002|gb|ABB23100.1| GTP-binding protein [Chlorobium luteolum DSM 273]
Length = 207
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 13/198 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I F++S +D P + PE GRSNVGKSSL+N+L +K LA TS PGKT+L
Sbjct: 2 KIINAAFIRSVSALQDLPDERVPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+FL+N Y VD+PGYG+A + W GY R+++ V+LL+D+ P +
Sbjct: 62 LNYFLINDDLYFVDIPGYGYAAVSHTEKDAWGRLLAGYVGGRQAIALVVLLLDSRHPAME 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM---KVAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
D + +L ++ P V TK DK+ + AK +R + + I +
Sbjct: 122 SDREMMEFLAYHDRPYGIVLTKDDKLTQKERAKAKRVTASCALNAEFI----------VS 171
Query: 195 TSSVTGLGRDELLLHMSQ 212
SS++G G+ ELL H
Sbjct: 172 YSSISGKGKKELLAHFDH 189
>gi|218781246|ref|YP_002432564.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
gi|226741189|sp|B8FLF0.1|ENGB_DESAA RecName: Full=Probable GTP-binding protein EngB
gi|218762630|gb|ACL05096.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01]
Length = 205
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK +F+ S+ + + P + PE A GRSNVGKSSLIN+L+++K+L TS PG+TQL+
Sbjct: 3 IKSAKFMSSATKPGNYPPPELPEIAFAGRSNVGKSSLINSLLKRKKLVKTSSTPGRTQLL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F VN+S VDLPGYG+AK R W + + R++L GV+L++D P
Sbjct: 63 NFFEVNESLVFVDLPGYGYAKVSKEMRKKWGQMIETFITTRKTLHGVVLILDLRRIPGGQ 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL-IRENYPHHPPWIMTSS 197
+ + W NNIP+ V TK DK ++ R+ + + + L I + H + S+
Sbjct: 123 ERENLAWFDLNNIPVILVATKADKF--SRQRQLAQQKEMAKALGIPLDVIH-----VFSA 175
Query: 198 VTGLGRDEL 206
TG GRDEL
Sbjct: 176 KTGQGRDEL 184
>gi|372272295|ref|ZP_09508343.1| GTP-binding protein engB [Marinobacterium stanieri S30]
Length = 215
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F S+ R CP D+ E A GRSN GKSS INAL ++ LA TSK PG+TQLIN F +
Sbjct: 15 FETSAARLDQCPADEGAEVAFAGRSNAGKSSAINALTQQTGLARTSKTPGRTQLINFFSL 74
Query: 84 N-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
N + IVDLPGYG+AK P + W Y +RESL GV+L++D P ++ D
Sbjct: 75 NIEGLKIVDLPGYGYAKVPIAMKQHWQRHLDAYLQHRESLRGVVLVMDIRHPMKEFDEMM 134
Query: 143 ANWLGRNNIPLTFVFTKCDKMK 164
+W +PL + TK DK+K
Sbjct: 135 VHWCEATGVPLHVLLTKEDKLK 156
>gi|394990187|ref|ZP_10383019.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricella
denitrificans skB26]
gi|393790452|dbj|GAB72658.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricella
denitrificans skB26]
Length = 208
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+E +F S+ + D P E A GRSN GKSS IN L + LA SK PG+TQLI
Sbjct: 4 FQEAQFFISADKLTDLPPPSGIEIAFAGRSNSGKSSAINTLANRNRLAFVSKTPGRTQLI 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F + ++VDLPGYG+AK P+ R+ W S Y + RESL G++L++DA P +
Sbjct: 64 NFFSLGNDRFLVDLPGYGYAKVPEAMRVHWQSVLSRYLMERESLYGLVLIMDARHPLTPL 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D NW P+ + TK DK+ ++ +++ + + YP+ + SS+
Sbjct: 124 DHQMLNWFIPTCKPVHVLLTKADKL---SKQQATSTLRAVRTELERTYPNCTVQLF-SSL 179
Query: 199 TGLGRDE 205
+G DE
Sbjct: 180 KRVGLDE 186
>gi|377831393|ref|ZP_09814370.1| GTPase [Lactobacillus mucosae LM1]
gi|377554820|gb|EHT16522.1| GTPase [Lactobacillus mucosae LM1]
Length = 196
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ S+ + PK D PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHHVDLTISAVAEEQYPKTDYPEIALVGRSNVGKSSLTNVLINRKNFAHTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R + + Y R L GV+ L+DA P
Sbjct: 62 LNFYNVEDQLFFVDVPGYGYAKVSKKQREKFGKMIETYLTTRPQLKGVIELVDARHAPSD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL +PL V TK DK+K P KS Q+ + P + S+
Sbjct: 122 DDVAMYQWLKYYQVPLLVVGTKIDKVK------PSARTKSISQITKTLGMTDTPLQLFSA 175
Query: 198 VTGLGRDEL 206
T G+DE+
Sbjct: 176 ETKFGKDEV 184
>gi|429766110|ref|ZP_19298384.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium celatum
DSM 1785]
gi|429185090|gb|EKY26079.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium celatum
DSM 1785]
Length = 206
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 9/191 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ EF+ S+ + P D R E A +GRSNVGKSS+INAL +++LA S+ PGKT+LI
Sbjct: 3 IKKSEFIISAVKRNQYPIDGRNEIAFVGRSNVGKSSIINALTNRRKLAKVSQTPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N FL+N +Y+VDLPGYG+AK + W + Y +R+ L V+LL+D+ P
Sbjct: 63 NFFLINDDFYLVDLPGYGYAKVSKKEKESWGKTIETYLTDRDELKRVILLVDSRHKPTAD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN--YPHHPPWIMTS 196
D+ W+ + + TK DK+ + + ++LI+E + + S
Sbjct: 123 DIMMYEWIKHYDYDCIVIATKSDKL-------SNNELGKSRKLIKETLGLGNTDKFYFFS 175
Query: 197 SVTGLGRDELL 207
S+ G+DEL+
Sbjct: 176 SLNKKGKDELI 186
>gi|392395205|ref|YP_006431807.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390526283|gb|AFM02014.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 213
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ EFV S+ K P+ PE A+ GRSNVGKSSLIN + ++ LA T PGKTQ++
Sbjct: 4 IRKAEFVTSAVDIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQML 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N W VDLPGYG+AK + +W + YF RE+L V+ ++D P
Sbjct: 64 NFYRINDEWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDIRHVPSVE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW---IMT 195
D + +L IP+ V TK D K++KG+ K Q+ + H P W I
Sbjct: 124 DQEMHAFLRNRGIPVLVVATKAD--KISKGQWG----KHLSQIAKA--LHIPDWHMIITY 175
Query: 196 SSVTGLGRDEL 206
S+ TGLG EL
Sbjct: 176 SAETGLGVPEL 186
>gi|381210507|ref|ZP_09917578.1| GTP-binding protein YsxC [Lentibacillus sp. Grbi]
Length = 193
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 5/196 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ K P D PE A+ GRSNVGKSS IN L+++K LA TS KPGKTQ
Sbjct: 2 KVTDAEIVISAVSKKQYPNDRLPEIALAGRSNVGKSSFINRLIQRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + +N +Y D+PGYG+AK R W + + YF R++L +++ D P +
Sbjct: 62 INFYKINNKFYFTDVPGYGYAKVSKKEREKWGAMMEEYFAMRDTLKACVMITDVRHEPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L +P+ + TK D K+AKG+R ++ + L E P+ S+
Sbjct: 122 DDVLMYDFLKYYELPVIVIATKLD--KIAKGKRASHLKRTHETLEIEPEDIVIPF---SA 176
Query: 198 VTGLGRDELLLHMSQL 213
TG G+D+ + Q
Sbjct: 177 ETGEGKDDAWRAIRQF 192
>gi|312113265|ref|YP_004010861.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
gi|311218394|gb|ADP69762.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium
vannielii ATCC 17100]
Length = 214
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
EFV P+ +RPE A GRSNVGKSSL+NAL+ ++ LA S PG+T+ +N+F
Sbjct: 25 AEFVLGVTDVAALPEGNRPEVAFAGRSNVGKSSLLNALLSRRNLARVSNTPGRTREVNYF 84
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
V + Y+VD+PGYG+AKAP W+ Y R L V+LLID+ + D +
Sbjct: 85 SVGDALYVVDMPGYGYAKAPKALVKGWTQLIHDYLRGRPQLKRVMLLIDSRHGLKPSDKE 144
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
L + + V TK DK K + ++ + ++R + HP + TSSV G
Sbjct: 145 IMTLLDKAAVSYQGVLTKADKPKAGD---LGQVVRETEAVMRTHPAAHPVVLTTSSVDGA 201
Query: 202 GRDELLLHMSQL 213
G +EL +++L
Sbjct: 202 GIEELRTAIAEL 213
>gi|126463487|ref|YP_001044601.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides ATCC 17029]
gi|332559540|ref|ZP_08413862.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
gi|126105151|gb|ABN77829.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC
17029]
gi|332277252|gb|EGJ22567.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N]
Length = 217
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+FVK + P DR E GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFA 88
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ S Y+VDLPGYG+A+AP W KGY R++L +LID + +D +
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
L R+ + V TK D KV++ R + + + ++++ +P +MTSS G+G
Sbjct: 149 LTLLDRSAVTFQVVMTKAD--KVSQAER-EAVLDQVRGALKKHPAAYPELVMTSSEKGMG 205
Query: 203 RDEL 206
+ L
Sbjct: 206 IETL 209
>gi|73667065|ref|YP_303081.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia canis str.
Jake]
gi|119369194|sp|Q3YS22.1|ENGB_EHRCJ RecName: Full=Probable GTP-binding protein EngB
gi|72394206|gb|AAZ68483.1| GTP-binding domain [Ehrlichia canis str. Jake]
Length = 200
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + EF+ + K P PE AI GRSNVGKSSLINA+ K+ A TS +PG T+ I
Sbjct: 7 MSKCEFIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTKQI 66
Query: 79 NHFLVNKSWYI-VDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N +L+NKS+ + VDLPGYG++KA T ++ + Y LN ++L+ V+LLID V ++
Sbjct: 67 NFYLINKSFMVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLIDVKVGFKE 126
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDLD NWL N+I V TK D++ D NI + L + P I SS
Sbjct: 127 IDLDFINWLELNHIYYQLVLTKIDRV---SKEILDVNINYIKNLNLGFVIY--PVISASS 181
Query: 198 VTGLGRDELLLHMSQ 212
G EL+ ++Q
Sbjct: 182 KYKQGIGELIYEIAQ 196
>gi|29376444|ref|NP_815598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
V583]
gi|227519262|ref|ZP_03949311.1| GTPase [Enterococcus faecalis TX0104]
gi|227555531|ref|ZP_03985578.1| GTPase [Enterococcus faecalis HH22]
gi|229545497|ref|ZP_04434222.1| GTPase [Enterococcus faecalis TX1322]
gi|229549743|ref|ZP_04438468.1| GTPase [Enterococcus faecalis ATCC 29200]
gi|255972439|ref|ZP_05423025.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255975539|ref|ZP_05426125.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256762853|ref|ZP_05503433.1| GTP-binding protein [Enterococcus faecalis T3]
gi|256853437|ref|ZP_05558807.1| GTPase EngB [Enterococcus faecalis T8]
gi|256959235|ref|ZP_05563406.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256961588|ref|ZP_05565759.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|256964804|ref|ZP_05568975.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|257079303|ref|ZP_05573664.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|257082258|ref|ZP_05576619.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|257084875|ref|ZP_05579236.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|257087128|ref|ZP_05581489.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257416358|ref|ZP_05593352.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257419606|ref|ZP_05596600.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257422288|ref|ZP_05599278.1| GTPase engB [Enterococcus faecalis X98]
gi|293382410|ref|ZP_06628347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R712]
gi|293388259|ref|ZP_06632775.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
S613]
gi|294779795|ref|ZP_06745182.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
PC1.1]
gi|300861039|ref|ZP_07107126.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TUSoD Ef11]
gi|307268263|ref|ZP_07549647.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4248]
gi|307272886|ref|ZP_07554133.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0855]
gi|307275639|ref|ZP_07556780.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2134]
gi|307280531|ref|ZP_07561580.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0860]
gi|307287932|ref|ZP_07567965.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0109]
gi|307295962|ref|ZP_07575794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0411]
gi|312900931|ref|ZP_07760225.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0470]
gi|312902701|ref|ZP_07761905.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0635]
gi|312908363|ref|ZP_07767327.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 512]
gi|312910564|ref|ZP_07769406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 516]
gi|312950950|ref|ZP_07769860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0102]
gi|384513544|ref|YP_005708637.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1RF]
gi|384518925|ref|YP_005706230.1| GTPase, EngB subfamily [Enterococcus faecalis 62]
gi|397700152|ref|YP_006537940.1| GTPase, EngB subfamily [Enterococcus faecalis D32]
gi|421514291|ref|ZP_15960982.1| GTP-binding protein EngB [Enterococcus faecalis ATCC 29212]
gi|422686335|ref|ZP_16744533.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4000]
gi|422690261|ref|ZP_16748318.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0630]
gi|422692748|ref|ZP_16750763.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0031]
gi|422695299|ref|ZP_16753287.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4244]
gi|422697135|ref|ZP_16755081.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1346]
gi|422702081|ref|ZP_16759921.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1342]
gi|422704827|ref|ZP_16762637.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1302]
gi|422705484|ref|ZP_16763286.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0043]
gi|422708739|ref|ZP_16766267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0027]
gi|422713230|ref|ZP_16769983.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309A]
gi|422717233|ref|ZP_16773923.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309B]
gi|422719413|ref|ZP_16776054.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0017]
gi|422723964|ref|ZP_16780454.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2137]
gi|422725148|ref|ZP_16781616.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0312]
gi|422730191|ref|ZP_16786584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0012]
gi|422732502|ref|ZP_16788833.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0645]
gi|422735820|ref|ZP_16792086.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1341]
gi|422741794|ref|ZP_16795816.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2141]
gi|422868916|ref|ZP_16915441.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1467]
gi|424672898|ref|ZP_18109841.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
599]
gi|424678390|ref|ZP_18115230.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV103]
gi|424681763|ref|ZP_18118549.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV116]
gi|424684575|ref|ZP_18121286.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV129]
gi|424687718|ref|ZP_18124347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV25]
gi|424691000|ref|ZP_18127527.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV31]
gi|424694689|ref|ZP_18131085.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV37]
gi|424697262|ref|ZP_18133592.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV41]
gi|424702120|ref|ZP_18138283.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV62]
gi|424704340|ref|ZP_18140442.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV63]
gi|424712807|ref|ZP_18144976.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV65]
gi|424715919|ref|ZP_18145241.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV68]
gi|424722311|ref|ZP_18151375.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV72]
gi|424724517|ref|ZP_18153460.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV73]
gi|424726710|ref|ZP_18155364.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV81]
gi|424740465|ref|ZP_18168847.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV85]
gi|424749822|ref|ZP_18177899.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV93]
gi|424759979|ref|ZP_18187634.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R508]
gi|428767324|ref|YP_007153435.1| probable GTP-binding protein engB [Enterococcus faecalis str.
Symbioflor 1]
gi|430361686|ref|ZP_19426763.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1X]
gi|430368573|ref|ZP_19428314.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
M7]
gi|81838891|sp|Q833M8.1|ENGB_ENTFA RecName: Full=Probable GTP-binding protein EngB
gi|29343908|gb|AAO81668.1| GTP-binding protein [Enterococcus faecalis V583]
gi|227073274|gb|EEI11237.1| GTPase [Enterococcus faecalis TX0104]
gi|227175336|gb|EEI56308.1| GTPase [Enterococcus faecalis HH22]
gi|229305012|gb|EEN71008.1| GTPase [Enterococcus faecalis ATCC 29200]
gi|229309413|gb|EEN75400.1| GTPase [Enterococcus faecalis TX1322]
gi|255963457|gb|EET95933.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255968411|gb|EET99033.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256684104|gb|EEU23799.1| GTP-binding protein [Enterococcus faecalis T3]
gi|256711896|gb|EEU26934.1| GTPase EngB [Enterococcus faecalis T8]
gi|256949731|gb|EEU66363.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256952084|gb|EEU68716.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|256955300|gb|EEU71932.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|256987333|gb|EEU74635.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|256990288|gb|EEU77590.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|256992905|gb|EEU80207.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|256995158|gb|EEU82460.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257158186|gb|EEU88146.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257161434|gb|EEU91394.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257164112|gb|EEU94072.1| GTPase engB [Enterococcus faecalis X98]
gi|291080186|gb|EFE17550.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R712]
gi|291082341|gb|EFE19304.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
S613]
gi|294453169|gb|EFG21584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
PC1.1]
gi|300850078|gb|EFK77828.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TUSoD Ef11]
gi|306496293|gb|EFM65872.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0411]
gi|306501077|gb|EFM70384.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0109]
gi|306504079|gb|EFM73295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0860]
gi|306507744|gb|EFM76873.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2134]
gi|306510500|gb|EFM79523.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0855]
gi|306515423|gb|EFM83954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4248]
gi|310625777|gb|EFQ09060.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 512]
gi|310631099|gb|EFQ14382.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0102]
gi|310633755|gb|EFQ17038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0635]
gi|311289112|gb|EFQ67668.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
DAPTO 516]
gi|311292030|gb|EFQ70586.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0470]
gi|315025927|gb|EFT37859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2137]
gi|315028965|gb|EFT40897.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4000]
gi|315033239|gb|EFT45171.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0017]
gi|315036724|gb|EFT48656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0027]
gi|315143499|gb|EFT87515.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX2141]
gi|315147582|gb|EFT91598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX4244]
gi|315149320|gb|EFT93336.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0012]
gi|315152207|gb|EFT96223.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0031]
gi|315157012|gb|EFU01029.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0043]
gi|315159834|gb|EFU03851.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0312]
gi|315161526|gb|EFU05543.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0645]
gi|315163616|gb|EFU07633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1302]
gi|315167355|gb|EFU11372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1341]
gi|315169562|gb|EFU13579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1342]
gi|315174261|gb|EFU18278.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1346]
gi|315574491|gb|EFU86682.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309B]
gi|315576776|gb|EFU88967.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0630]
gi|315581847|gb|EFU94038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX0309A]
gi|323481058|gb|ADX80497.1| GTPase, EngB subfamily [Enterococcus faecalis 62]
gi|327535433|gb|AEA94267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1RF]
gi|329572879|gb|EGG54504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
TX1467]
gi|397336791|gb|AFO44463.1| GTPase, EngB subfamily [Enterococcus faecalis D32]
gi|401672682|gb|EJS79149.1| GTP-binding protein EngB [Enterococcus faecalis ATCC 29212]
gi|402350447|gb|EJU85350.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV116]
gi|402351718|gb|EJU86598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV103]
gi|402353404|gb|EJU88236.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
599]
gi|402360911|gb|EJU95504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV129]
gi|402363066|gb|EJU97575.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV31]
gi|402363510|gb|EJU97988.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV25]
gi|402370126|gb|EJV04366.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV62]
gi|402370235|gb|EJV04458.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV37]
gi|402376200|gb|EJV10159.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV41]
gi|402379684|gb|EJV13476.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV65]
gi|402382429|gb|EJV16096.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV63]
gi|402389193|gb|EJV22594.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV68]
gi|402389318|gb|EJV22717.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV72]
gi|402394788|gb|EJV27938.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV73]
gi|402398711|gb|EJV31635.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV81]
gi|402402078|gb|EJV34814.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV85]
gi|402404050|gb|EJV36684.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
R508]
gi|402407515|gb|EJV40041.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
ERV93]
gi|427185497|emb|CCO72721.1| probable GTP-binding protein engB [Enterococcus faecalis str.
Symbioflor 1]
gi|429512239|gb|ELA01847.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
OG1X]
gi|429516329|gb|ELA05823.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis
M7]
Length = 193
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ E V S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+ + + VD+PGYG+AK R W + Y RE L V+ LID PP +
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L ++P+ V TK DK+ K + + IK N+ +I+ SS
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKAL-----NFDKQDDFIIFSSE 177
Query: 199 TGLGRD 204
T G++
Sbjct: 178 TKEGKE 183
>gi|375090810|ref|ZP_09737122.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia languida
CCUG 37842]
gi|374564972|gb|EHR36251.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia languida
CCUG 37842]
Length = 195
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IKE E V+++ + P+DD PE A+ GRSNVGKSS IN LV +K LA TS +PGKT+ +
Sbjct: 3 IKEAELVRTAVNDRQYPQDDLPEIALAGRSNVGKSSFINRLVNRKGLARTSSQPGKTRTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N+++ IVD+PGYG+A+ R W + + + R+ LV ++LL+D P ++
Sbjct: 63 NFYEINQAFRIVDVPGYGYARVSKSDRQKWQAMNERFLSQRDQLVLLILLMDMRHAPTEL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D ++ ++P TK DK+K K +R + +K ++Q++ + P S+
Sbjct: 123 DQAMYHFAEGLDLPFAICLTKLDKVK--KSQRA-KQLKLYKQVL--DLPTTDALFPFSAE 177
Query: 199 TGLGRDEL 206
TG G+ ++
Sbjct: 178 TGEGQADI 185
>gi|114322004|ref|YP_743687.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii
MLHE-1]
gi|119368788|sp|Q0A4P0.1|ENGB_ALHEH RecName: Full=Probable GTP-binding protein EngB
gi|114228398|gb|ABI58197.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii
MLHE-1]
Length = 206
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ F+ S+ + P D E A GRSNVGKSS IN L +K LA TSK PG+TQLIN
Sbjct: 7 QARFLTSAPDLRRMPPDQGREVAFAGRSNVGKSSAINTLTNQKSLARTSKTPGRTQLINV 66
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + +VDLPGYG+AK P R W Y R +L GV+L++D P D
Sbjct: 67 FPITDEAALVDLPGYGYAKVPAAVRRRWDQVLPEYLAGRRALRGVVLVMDLRHPLTDFDR 126
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+W G +PL + TK DK K R +N+ + +R +P W + S+
Sbjct: 127 QMLDWCGHIGVPLHVLLTKADKFKAGAARNRGQNVG---RQLRAEWP-GVTWQIFSASKR 182
Query: 201 LGRDE 205
+G DE
Sbjct: 183 MGVDE 187
>gi|429244626|ref|ZP_19208065.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001628]
gi|428758344|gb|EKX80777.1| GTP-binding protein YsxC [Clostridium botulinum CFSAN001628]
Length = 180
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
Query: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPG 94
P+D RPE A +GRSNVGKS+LIN L +++L S PGKT+LIN F++N + Y VDLPG
Sbjct: 7 PEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFVINDNMYFVDLPG 66
Query: 95 YGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLT 154
YG+AK + +W + Y + R+ L ++LL+D+ P D++ NW+ N +
Sbjct: 67 YGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINMYNWIKHYNYEVL 126
Query: 155 FVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP--HHPPWIMTSSVTGLGRDELL 207
V TK DK+K R D I +++IR+ ++ SS++ G++E+L
Sbjct: 127 VVGTKLDKLK-----RND--INKNKKIIRDTLKMDKDDKILLISSLSKEGKEEVL 174
>gi|410456501|ref|ZP_11310361.1| GTP-binding protein YsxC [Bacillus bataviensis LMG 21833]
gi|409927885|gb|EKN65010.1| GTP-binding protein YsxC [Bacillus bataviensis LMG 21833]
Length = 193
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+ V S+ + P+ + PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ +N +L
Sbjct: 7 DIVISAVKPDQYPETELPEFALAGRSNVGKSSFINKMLNRKGLARISSKPGKTQTLNFYL 66
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+N+ + VD+PGYG+AK R W + YF +RE L +L++D PP D+
Sbjct: 67 INEILHFVDVPGYGYAKVSKTERAAWGKMIETYFTSREQLRAAVLIVDLRHPPTTDDVMM 126
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
++L IP + TK DK+ K ++ ++K ++ + + H +M SS TG G
Sbjct: 127 YDFLKHYEIPCVIIATKADKIPKGKWQK---HLKVTRETLDLDKNDH--LVMFSSETGEG 181
Query: 203 RDE 205
+D+
Sbjct: 182 KDQ 184
>gi|221640559|ref|YP_002526821.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter
sphaeroides KD131]
gi|429207206|ref|ZP_19198465.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
gi|221161340|gb|ACM02320.1| GTP-binding protein engB [Rhodobacter sphaeroides KD131]
gi|428189581|gb|EKX58134.1| GTP-binding protein EngB [Rhodobacter sp. AKP1]
Length = 217
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 3/184 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+FVK + P DR E GRSNVGKSSLINAL +K LA S PG+TQ IN+F
Sbjct: 29 DFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFA 88
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ S Y+VDLPGYG+A+AP W KGY R++L +LID + +D +
Sbjct: 89 LGPSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHGVKSVDEEI 148
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
L R+ + V TK DK+ A+ + + + ++++ +P +MTSS G+G
Sbjct: 149 LTLLDRSAVTFQVVMTKADKVSQAER---EAVLDQVRGALKKHPAAYPELVMTSSEKGMG 205
Query: 203 RDEL 206
+ L
Sbjct: 206 IETL 209
>gi|116621147|ref|YP_823303.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|122254883|sp|Q026Q1.1|ENGB_SOLUE RecName: Full=Probable GTP-binding protein EngB
gi|116224309|gb|ABJ83018.1| small GTP-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 191
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 87/150 (58%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EFV SSG+ P D PE A LGRSNVGKSSLINAL K+LA TS PG+TQ IN
Sbjct: 5 KAEFVVSSGKPDTFPSDRLPEIAFLGRSNVGKSSLINALTGHKKLAFTSNTPGRTQTINF 64
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
+ V++ +Y+VDLPGYG+A+ P W + Y RE+L L++D + DL
Sbjct: 65 YRVDEKFYLVDLPGYGYARVPAGFAEQWKVLIEHYLEFRETLKFSCLILDTRRGWMEKDL 124
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
D WL + P V TK DK+ ++ R
Sbjct: 125 DLKRWLDHHGRPYLVVATKTDKLNQSEQER 154
>gi|372267077|ref|ZP_09503125.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas sp. S89]
Length = 218
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ EF+ S+ +CP D E A GRSN GKSS INAL +LA TSK PG+TQLI
Sbjct: 11 FRHAEFLISAPTLAECPVDSGAEVAFAGRSNAGKSSAINALTDNNKLARTSKTPGRTQLI 70
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +++S +VDLPGYG+AK + +W Y NR+ L G++LL+D P ++
Sbjct: 71 NFFHLSESQRLVDLPGYGYAKVARAMKDEWQRNLAFYLENRQCLKGLVLLMDIRQPLKEF 130
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMK 164
DL NW ++ +P + TK DK+K
Sbjct: 131 DLQMLNWAVKSGLPAHILLTKADKLK 156
>gi|342216045|ref|ZP_08708692.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
gi|341586935|gb|EGS30335.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp.
oral taxon 375 str. F0436]
Length = 199
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 82/132 (62%)
Query: 32 KDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVD 91
K PK D E A GRSNVGKSS INAL ++K+LA TS KPGKT+ IN + ++ + +VD
Sbjct: 16 KQYPKTDLKEIAFAGRSNVGKSSFINALTQRKKLAYTSSKPGKTRTINFYRIDNCFRLVD 75
Query: 92 LPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNI 151
LPGYG+AK R DW+ +GY NR +++ ++LL+D+ + P D + W+ N
Sbjct: 76 LPGYGYAKVSKAMRDDWAQMIEGYLANRSNIIEIILLVDSRIEPTSQDREMYQWIVDNGF 135
Query: 152 PLTFVFTKCDKM 163
+ TK DK+
Sbjct: 136 SGIVIATKADKL 147
>gi|114770123|ref|ZP_01447661.1| GTP-binding protein [Rhodobacterales bacterium HTCC2255]
gi|114548960|gb|EAU51843.1| GTP-binding protein [alpha proteobacterium HTCC2255]
Length = 216
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+F+K P DR E GRSNVGKSSLINAL +K LA TS PG+TQ IN F
Sbjct: 27 TDFLKGVVGMDGMPPADRMEVCFAGRSNVGKSSLINALTGRKSLARTSNTPGRTQEINFF 86
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+++S Y+VD+PGYGFA AP W + K Y R SL V LLID+ + +D +
Sbjct: 87 TLSESHYLVDVPGYGFANAPLPVVKKWQTLLKAYLSGRASLRRVFLLIDSRHGVKSVDEE 146
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP-HHPPWIMTSSVTG 200
LGR+ + V TK DK K + E + S I YP +P +++TSS G
Sbjct: 147 IMELLGRSAVTFQVVLTKSDKPK----KNDLEKVISETGRIVAKYPAAYPEFVLTSSEKG 202
Query: 201 LG 202
G
Sbjct: 203 DG 204
>gi|152994783|ref|YP_001339618.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1]
gi|150835707|gb|ABR69683.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1]
Length = 214
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 5/197 (2%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S + F+KS+ + CP D E A GRSN GKS+ +N L +K+LA TSK PG+TQ
Sbjct: 6 STFQSAHFIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKTPGRTQ 65
Query: 77 LINHFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
LIN F +N ++DLPGYGFAK P + W + + Y +NR SL GV+L++D P
Sbjct: 66 LINCFGLNVDDRRLIDLPGYGFAKVPIAMKKVWQAHMQDYLMNRRSLAGVVLVMDIRHPL 125
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
++ D +W N + + + TK DK+K R P ++ + Q + +N
Sbjct: 126 KEFDEMMLDWAKSNRMKVHVLLTKSDKLK----RGPAKSTQLGVQKVLKNLGVDGSVQTF 181
Query: 196 SSVTGLGRDELLLHMSQ 212
SS++G G D L + +++
Sbjct: 182 SSLSGDGVDVLRIKLAE 198
>gi|357238648|ref|ZP_09125984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
ictaluri 707-05]
gi|356752370|gb|EHI69495.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
ictaluri 707-05]
Length = 199
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ +L
Sbjct: 77 LRFVDVPGYGYAKVSKTERARWGKMIEEYMTSRDNLRAVVSLVDLRHEPSKEDIQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV +G DE
Sbjct: 137 KYYEIPVIVVATKADKIPRGKWDKHESMIKK-----KLNFDKTDSFILFSSVDRIGIDE 190
>gi|366053346|ref|ZP_09451068.1| GTP-binding protein YsxC [Lactobacillus suebicus KCTC 3549]
Length = 197
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++EVE V S+ A P PE ++GRSNVGKSSL N L+ +K A TS +PGKT+
Sbjct: 2 EVQEVELVMSAVAASQYPTTGYPEIGLVGRSNVGKSSLTNVLINRKSYARTSSQPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V K Y VD+PGYG+AK R + + Y R+ L GV+ L+D P
Sbjct: 62 LNFYEVEKQLYFVDVPGYGYAKVSKKEREKFGVMIEEYLTQRDQLRGVIQLVDGRHAPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ WL +IP V TK DK+K A R LIR+ N ++
Sbjct: 122 DDVSMYQWLRYYHIPTLIVATKIDKIKPAVRNRE-------TSLIRKTLNMNADDELLLF 174
Query: 196 SSVTGLGRDEL 206
S+ T LG+DE+
Sbjct: 175 SAQTKLGKDEV 185
>gi|319651744|ref|ZP_08005870.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396563|gb|EFV77275.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 193
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E V S+ + P+ + PEFA+ GRSNVGKSS IN ++ ++ LA S KPGKTQ
Sbjct: 2 KVTSSEIVISAVKPDQYPESELPEFALAGRSNVGKSSFINKMLNRRGLARISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N+ + VD+PGYG+AK R W + Y +RE L V+L++D PP
Sbjct: 62 LNFYLINEILHFVDVPGYGYAKVSKKEREAWGKMIETYLTSREQLKAVVLIVDLRHPPSS 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ ++L +IP + TK DK+ P + ++ +E P IM
Sbjct: 122 DDVMMYDFLKHYDIPCVVIATKADKI-------PKSKWQKHMKITKETLDIDPNDQIIMF 174
Query: 196 SSVTGLGRDE 205
SS TG G+D+
Sbjct: 175 SSETGYGKDK 184
>gi|110598119|ref|ZP_01386397.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
gi|110340251|gb|EAT58748.1| GTP-binding [Chlorobium ferrooxidans DSM 13031]
Length = 202
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I F S P++ PE GRSNVGKS+L+N+L K LA TS PGKT+L
Sbjct: 12 KITSAAFHISVSALSGLPEESTPEIVFAGRSNVGKSTLLNSLTGLKALAKTSSTPGKTRL 71
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+FL+N+ +Y VDLPGYG+A + W Y R+S+ V+LL D+ P +
Sbjct: 72 INYFLINQEFYFVDLPGYGYAAVGQEQKAAWGHLLSSYIEERQSISLVVLLFDSRHPAME 131
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM---KVAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
D N+L + P V TK DK+ ++AK RR E+ + + I NY
Sbjct: 132 SDRAMINFLEFHERPYGIVLTKFDKLTQKEMAKTRRIMESCAAKAKFIV-NY-------- 182
Query: 195 TSSVTGLGRDELLLHM 210
SS +G G+ ELL H+
Sbjct: 183 -SSFSGKGKSELLAHL 197
>gi|407788370|ref|ZP_11135502.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
gi|407197651|gb|EKE67705.1| GTP-binding protein YsxC [Celeribacter baekdonensis B30]
Length = 215
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EFVK P DDR E GRSNVGKSSLINAL K LA S PG+TQ IN
Sbjct: 25 QTEFVKGVVAMDGMPPDDRLEVCFAGRSNVGKSSLINALTGHKALARASNTPGRTQEINF 84
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + S Y+VDLPGYG+AKAP T W K Y R +L +LID+ + +D
Sbjct: 85 FTASDSHYLVDLPGYGYAKAPIQTVEKWQRLLKAYLSGRATLRRAFVLIDSRHGVKSVDE 144
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ + L ++ + V TK DK+K + E +++ + ++ +P I+TSS G
Sbjct: 145 EIMDRLDKSAVTFQVVLTKADKVKEVERAAILEQVRT---AVAKHPAAYPELIVTSSEKG 201
Query: 201 LGRDELLLHMSQL 213
G D L ++ L
Sbjct: 202 WGIDVLRAVIATL 214
>gi|325295391|ref|YP_004281905.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065839|gb|ADY73846.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 194
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+V+ K+ ++ P+ E A +GRSNVGKSSL+N LV ++A S +PGKT+
Sbjct: 2 KIKKVKLYKTVYAPEELPQTPYKEVAFVGRSNVGKSSLLNTLVNNYKIAKVSSEPGKTRS 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+N +++VDLPGYGFAK P + W + Y R++L GV LL+D+ V P +
Sbjct: 62 VNFYLINDKFFMVDLPGYGFAKVPFKEQKRWRDLIEKYLKERDTLKGVFLLVDSKVGPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D +WL IP V TK DK+K ++ ++ + ++ +++ P+ SS
Sbjct: 122 KDKQMKDWLDFFGIPYVVVATKVDKLKSSEKQKLKRKV---EEGLKDKNLEIIPF---SS 175
Query: 198 VTGLGRDELLLHMSQL 213
T GR E+L + +L
Sbjct: 176 KTREGRVEVLKRIERL 191
>gi|325981834|ref|YP_004294236.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
gi|325531353|gb|ADZ26074.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp.
AL212]
Length = 198
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F S+ +D PK E A GRSN GKSS INAL + LA SK PG+TQLIN F +
Sbjct: 9 FYTSAHERRDLPKHSGIEIAFSGRSNAGKSSAINALTNRNRLAFVSKTPGRTQLINFFQL 68
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ ++VDLPGYG+AK P+ R+ W + Y R SL G++L++D P + D+
Sbjct: 69 ASNQFLVDLPGYGYAKVPEHVRLHWKNLLSNYLQTRNSLRGLILVMDIRHPLKPQDIQML 128
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
+W + + TK DK+ + + + F I+E YP + SS+T +G
Sbjct: 129 DWFSSTGKVIHILLTKADKLSKQQANITLQKVALF---IKEFYPQCSVQLF-SSITNIGV 184
Query: 204 DELL 207
D+ +
Sbjct: 185 DDAM 188
>gi|256847018|ref|ZP_05552464.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
coleohominis 101-4-CHN]
gi|256715682|gb|EEU30657.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
coleohominis 101-4-CHN]
Length = 196
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ V+ S+ P D PE A++GRSNVGKSSL NAL+ +K A TS +PGKTQ +
Sbjct: 3 VNHVDLTISAVHPDQYPSTDYPEIALVGRSNVGKSSLTNALINRKNFAHTSSQPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V Y VD+PGYG+AK R ++ + Y R L GV++L+D P
Sbjct: 63 NFYNVEDKLYFVDVPGYGYAKVSKKQREEFGQMIENYLTQRSQLRGVIMLVDGRHAPTAD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ WL +P+ V TK DK+K ++ R Q+L+++ + P ++ S
Sbjct: 123 DVQMYQWLAYYELPILVVATKIDKVKPSQFTR-------VQKLVKDKLEFQEKQPLVLFS 175
Query: 197 SVTGLGRDEL 206
+++ G++++
Sbjct: 176 AMSKRGKEDV 185
>gi|376295225|ref|YP_005166455.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
desulfuricans ND132]
gi|323457786|gb|EGB13651.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
desulfuricans ND132]
Length = 193
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ +E VK+ K D P+ A+ GRSNVGKSSL+N L +K LA S KPGKT+ +N
Sbjct: 3 RTIELVKTIYEIKQLEDVDAPQIALAGRSNVGKSSLVNRLAGRKALAKISSKPGKTRSLN 62
Query: 80 HFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
++ V+ +Y+VDLPGYG+AK R+ W+ + Y L V +L+DA + PQK+
Sbjct: 63 YYRVDPDGYYLVDLPGYGYAKCSKQERIKWAKLIEAYITGNTHLKAVAVLLDARLSPQKL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ ++ +IP+ V TK DK K R + K +Q +++++ PP ++ SS
Sbjct: 123 DLELTGYVRGLSIPVIPVLTKADK---PKQRELAQLQKQWQDILQQD---RPP-LLFSSK 175
Query: 199 TGLGRDELLLHMSQ 212
TG G ++L + +
Sbjct: 176 TGKGEEKLWARLGE 189
>gi|340777549|ref|ZP_08697492.1| GTP-binding protein YsxC [Acetobacter aceti NBRC 14818]
Length = 223
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EF + + P PE A GRSNVGKSSLINAL +K LA S +PG+T+ +N F
Sbjct: 30 EFFYGAQQIGQLPDPAAPEVAFAGRSNVGKSSLINALTGRKSLARASSEPGRTKQLNFFD 89
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ +VD+PGYGFAKA + DW Y R +L V+LL+DA + + D D
Sbjct: 90 LDGQLVLVDMPGYGFAKAAKAVKEDWQGMMFDYLRGRPNLRRVILLLDARIETKASDRDV 149
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH---HPPWIMTSSVT 199
+ + I V TKCD +K P +++++ E H HP + TSS T
Sbjct: 150 MDMFDKAAINFQVVLTKCDDVK------PKAEEARYREVVEEVSRHPAAHPLVLRTSSQT 203
Query: 200 GLGRDELLLHMS 211
GLG EL ++
Sbjct: 204 GLGIPELRAEIA 215
>gi|365925260|ref|ZP_09448023.1| GTP-binding protein [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 195
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V S+ R + P + PE A++GRSNVGKSSLIN L+ +K A TS +PGKTQ
Sbjct: 2 KVHNVNLKISAVRPEQYPDEGYPEVALVGRSNVGKSSLINRLINRKSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y+VD+PGYG+AK R W + Y + RE L GV+ LID P +
Sbjct: 62 LNFYDVESMLYLVDVPGYGYAKVSKAEREKWGRMIETYLVQREPLRGVVSLIDGRHEPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
+D+ +L N+P+ V TK DK+ +K + +++IK
Sbjct: 122 LDVQMVEFLQYYNLPVLLVATKIDKIPRSKWNKVEKDIK 160
>gi|452995866|emb|CCQ92254.1| GTPase involved in ribosome 50S subunit assembly [Clostridium
ultunense Esp]
Length = 215
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EF+ S+ P+D PE A+ GRSNVGKSS IN+++ +K LA S KPGKTQ +N
Sbjct: 5 QAEFIGSAVHPSQYPQDGLPEIALAGRSNVGKSSFINSMLNRKNLARISSKPGKTQTLNF 64
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
+ V +Y VDLPGYG+A+ R W + + Y R++L+ ++ L+D PP D
Sbjct: 65 YRVGGRFYFVDLPGYGYAEVSKKEREAWGAMIERYIKGRKTLLFLIQLVDIRHPPSGQDR 124
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
W+ + IP V TK DK+ + + IK L E+ P SS T
Sbjct: 125 QMREWIVHSGIPSLVVATKADKISRGRWQAHLNEIKKILSLTPED-----PLFPYSSETK 179
Query: 201 LGRDEL 206
+GR+E+
Sbjct: 180 VGREEV 185
>gi|260427039|ref|ZP_05781018.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
gi|260421531|gb|EEX14782.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45]
Length = 217
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV+F+K P DDR E GRSNVGKSSLINAL +K LA S PG+TQ IN
Sbjct: 27 EVDFLKGVVAMDGLPPDDRTEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINF 86
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + + Y+VDLPGYGFA AP W K Y R SL +LID+ + +D
Sbjct: 87 FTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRASLRRAFVLIDSRHGVKAVDE 146
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP----WIMTS 196
+ L R+ + V TK DK+ R E K Q +RE HP ++TS
Sbjct: 147 EIMTLLDRSAVTFQAVLTKSDKI------REKEREKVLDQ-VREKLSKHPAAYPELVLTS 199
Query: 197 SVTGLG 202
S G G
Sbjct: 200 SEKGDG 205
>gi|374583393|ref|ZP_09656487.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus youngiae DSM 17734]
gi|374419475|gb|EHQ91910.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus youngiae DSM 17734]
Length = 208
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ E+ S+ + + P D PE A+ GRSNVGKSSLIN + ++ LA T PGKTQ +
Sbjct: 4 IKKAEYAASAVKYEQYPTDGLPEIAMAGRSNVGKSSLINRFLGRRNLARTGNTPGKTQTL 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +W+ VDLPGYG+AK W + Y RE L V+ ++D P
Sbjct: 64 NFYRVNDAWFFVDLPGYGYAKVAKTVNAQWGPMMENYLKKREPLRAVIQIVDIRHAPSAE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D++ WL +P V TK DK+ + ++ I +L P + S+
Sbjct: 124 DIEMQQWLRSMQVPTMVVATKVDKISRGQWQKHLNVIARDLEL-----PDVSLILPFSAQ 178
Query: 199 TGLGRDEL 206
TG+G +EL
Sbjct: 179 TGVGNEEL 186
>gi|331005490|ref|ZP_08328868.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989]
gi|330420682|gb|EGG94970.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989]
Length = 208
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 84/141 (59%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F++S+ + CP E A GRSN GKSS IN L K+LA TSK PG+TQLIN+F +
Sbjct: 12 FLQSASKLSQCPTAITAEVAFAGRSNAGKSSAINTLTDNKKLARTSKTPGRTQLINYFSI 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
N +VDLPGYG+AK P + +W Y +R+ L G++LL+D P Q+ D
Sbjct: 72 NAEKSLVDLPGYGYAKVPISMKREWDKNLTEYLQSRDVLKGLVLLMDIRHPMQEFDTMML 131
Query: 144 NWLGRNNIPLTFVFTKCDKMK 164
N N +P+ + TKCDK+K
Sbjct: 132 NQAIDNEMPVRILLTKCDKLK 152
>gi|222152936|ref|YP_002562113.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus uberis
0140J]
gi|254783213|sp|B9DU74.1|ENGB_STRU0 RecName: Full=Probable GTP-binding protein EngB
gi|222113749|emb|CAR41756.1| putative GTP-binding protein [Streptococcus uberis 0140J]
Length = 199
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPEDDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK V R W + Y +R++L V+ L+D P D+ +L
Sbjct: 77 IRFVDVPGYGYAKVSKVERARWGKMIEEYLTSRDNLRAVVSLVDLRHEPSTEDVQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV +G D+
Sbjct: 137 KYYEIPVIVVATKADKIPRGKWNKHESMIKK-----KLNFEQEDAFILFSSVDRIGIDQ 190
>gi|407775416|ref|ZP_11122710.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
gi|407281423|gb|EKF06985.1| GTP-binding protein YsxC [Thalassospira profundimaris WP0211]
Length = 220
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V FV + + P +D+ E GRSNVGKSSLINA+ +K++A TS PG+TQ +N+F
Sbjct: 31 VNFVLGVAQLEQLPPEDKTEICFAGRSNVGKSSLINAITGRKDIARTSNTPGRTQQLNYF 90
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ + YIVDLPGYGFA+AP W + K Y R +L V +LID+ +K DLD
Sbjct: 91 DLDGACYIVDLPGYGFAQAPKDIVDTWHALIKQYLRGRVTLRRVFVLIDSRHGFKKADLD 150
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIM-TSSVTG 200
L +P V TK DK+K KG+ + LI+ +P P I TSS
Sbjct: 151 MMKLLDEAAVPYQVVLTKADKLK--KGQLEKRIKEVVDGLIK--HPAALPQIFATSSEKN 206
Query: 201 LGRDELLLHMSQL 213
G EL +S L
Sbjct: 207 TGLAELRAEISTL 219
>gi|386289430|ref|ZP_10066560.1| GTP-binding protein YsxC [gamma proteobacterium BDW918]
gi|385277493|gb|EIF41475.1| GTP-binding protein YsxC [gamma proteobacterium BDW918]
Length = 230
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 2/147 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ ++KSS CP D E A GRSN GKSS IN L K+LA TSK PG+TQL+N
Sbjct: 10 RRASYLKSSPNLTHCPDDSGAEVAFAGRSNAGKSSAINRLTENKKLAKTSKTPGRTQLLN 69
Query: 80 HFLVNKS--WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
F+++ S +VDLPGYGFAK P + +W + Y R+SL G++L++D P +
Sbjct: 70 FFVLDDSGRQRLVDLPGYGFAKVPLAVKNEWQRNLEAYLQKRQSLRGMVLMMDIRHPLTE 129
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D W ++N+P+ + TK DK+K
Sbjct: 130 FDQQMVRWATKSNMPMHLLLTKSDKLK 156
>gi|254556940|ref|YP_003063357.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum JDM1]
gi|300768255|ref|ZP_07078160.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180929|ref|YP_003925057.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|380032874|ref|YP_004889865.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|418275670|ref|ZP_12890993.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821641|ref|YP_007414803.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
gi|38257507|sp|Q88VE3.1|ENGB_LACPL RecName: Full=Probable GTP-binding protein EngB
gi|254045867|gb|ACT62660.1| GTPase EngB [Lactobacillus plantarum JDM1]
gi|300494319|gb|EFK29482.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046420|gb|ADN98963.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III]
gi|342242117|emb|CCC79351.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum WCFS1]
gi|376009221|gb|EHS82550.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275138|gb|AGE39657.1| putative GTP-binding protein EngB [Lactobacillus plantarum ZJ316]
Length = 197
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 98/189 (51%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ P PE + GRSNVGKSSLIN L+ + A TS +PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R W + Y +RE+L GV++L+DA P K
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTSRETLRGVVILVDARHAPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ +PL V TK DK+ K + + IK N+ +I S+
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSDKIPRGKWNKQESLIKKTL-----NFQAEDDFIAFSA 176
Query: 198 VTGLGRDEL 206
T G+D +
Sbjct: 177 KTKEGKDAV 185
>gi|295113199|emb|CBL31836.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Enterococcus sp.
7L76]
Length = 193
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ E + S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ +
Sbjct: 3 VHNAEIMISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+ + + VD+PGYG+AK R W + Y RE L V+ LID PP +
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L ++P+ V TK DK+ K + + IK N+ +I+ SS
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKAL-----NFDKQDDFIIFSSE 177
Query: 199 TGLGRD 204
T G++
Sbjct: 178 TKEGKE 183
>gi|257090205|ref|ZP_05584566.1| GTP-binding protein [Enterococcus faecalis CH188]
gi|256999017|gb|EEU85537.1| GTP-binding protein [Enterococcus faecalis CH188]
Length = 193
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ E V S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+ + + VD+PGYG+AK R W + Y RE L V+ LID PP +
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRVVVSLIDLRHPPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L ++P+ V TK DK+ K + + IK N+ +I+ SS
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKAL-----NFDKQDDFIIFSSE 177
Query: 199 TGLGRD 204
T G++
Sbjct: 178 TKEGKE 183
>gi|374997637|ref|YP_004973136.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
gi|357216003|gb|AET70621.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfosporosinus orientis DSM 765]
Length = 199
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 7/189 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K+ E+ S+ + + P D PE A+ GRSNVGKSSLIN+ + ++ LA T PGKTQ +
Sbjct: 4 VKKAEYTASAVKYEQYPTDGLPEIAMAGRSNVGKSSLINSFLGRRNLARTGNTPGKTQTL 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +W++VDLPGYG+AK W + Y RE L V+ ++D P
Sbjct: 64 NFYRVNDAWFLVDLPGYGYAKVAKTVNAQWGPMMENYLKKREQLRAVIQIVDIRHAPSVE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHHPPWIMTSS 197
D + WL +P V TK D K+A+G+ +K + + ++ P + SS
Sbjct: 124 DREMHEWLRVKQVPTMVVATKAD--KIARGQW----LKHLKVIAKDLEIPDVSLILPFSS 177
Query: 198 VTGLGRDEL 206
+G+G+ EL
Sbjct: 178 QSGVGKKEL 186
>gi|303248057|ref|ZP_07334323.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
fructosovorans JJ]
gi|302490614|gb|EFL50519.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
fructosovorans JJ]
Length = 210
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY-IVDLP 93
P D P+ A+ GRSNVGKS+L+N L +K LA S PGKT+ +N ++ + Y +VDLP
Sbjct: 27 PTVDAPQVALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYMAQAAGYCLVDLP 86
Query: 94 GYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPL 153
GYG+A+ R W+ Y L V L+D +PPQ++D++ +WL +P+
Sbjct: 87 GYGYARCSMAEREKWAKLIDSYLKKTSRLRAVTALVDCRLPPQRLDVELVDWLRARRMPV 146
Query: 154 TFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
V TK DK K R + K +++L R P PP I+ S TGLGR+ L +++
Sbjct: 147 LVVLTKADK---CKQRDREARKKEWRELAR---PAFPP-ILFSGKTGLGREALCRVLAE 198
>gi|157151518|ref|YP_001450428.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
gordonii str. Challis substr. CH1]
gi|189037195|sp|A8AXB8.1|ENGB_STRGC RecName: Full=Probable GTP-binding protein EngB
gi|157076312|gb|ABV10995.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 197
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHEPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV
Sbjct: 128 MYEFLKYYEIPVILVATKADKIPRGKWNKHESAIKK-----KLNFDQADTFILFSSVDKT 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|225028674|ref|ZP_03717866.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353]
gi|224953984|gb|EEG35193.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium hallii
DSM 3353]
Length = 197
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G PK+ PE A G+SNVGKSSLINALV +K LA TS +PGKTQ I
Sbjct: 3 IKNVNLETVCGITSKLPKNTLPEVAFAGKSNVGKSSLINALVNRKSLARTSGQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN+ YIVDLPGYG+AK W + Y E L V LLID P
Sbjct: 63 NFYNVNEEMYIVDLPGYGYAKVSKEVAAKWGPMIENYLHTSEQLRMVFLLIDLRHKPTNN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ W+ N V TK DK+K ++ ++ + +K ++I E P P S+V
Sbjct: 123 DVQMYRWILSNGFSPVIVATKADKIKRSQLQKQLKLLKDTLKVI-EGVPIVP----FSAV 177
Query: 199 TGLGRDEL 206
T GRDE+
Sbjct: 178 TKAGRDEI 185
>gi|295397567|ref|ZP_06807646.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
gi|294974191|gb|EFG49939.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans
ATCC 11563]
Length = 201
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VEF+ S+ R + P PE A+ GRSNVGKSS IN ++ +K+LA TS KPGKTQ +
Sbjct: 3 VHNVEFLISAVRPEQYPAPIIPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTQQL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ + +Y VD+PGYG+A+ + W + YF RE+L LL++D P K
Sbjct: 63 NYYQIEDLFYFVDVPGYGYARVSKTEKAKWGEMLETYFATRENLALALLIVDFRHKPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ ++ + +P + TK DK+K ++ + +I ++ L E+ P+ S+
Sbjct: 123 DIQMKEFMDYHGVPYFVIATKTDKIKKSQWNKHLSDI--YKTLELESIDQILPF---SAE 177
Query: 199 TGLGRDE 205
T GRDE
Sbjct: 178 TKDGRDE 184
>gi|15615611|ref|NP_243915.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus halodurans
C-125]
gi|13124217|sp|Q9K8F7.1|ENGB_BACHD RecName: Full=Probable GTP-binding protein EngB
gi|10175671|dbj|BAB06768.1| GTP-binding protein [Bacillus halodurans C-125]
Length = 194
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 5/171 (2%)
Query: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPG 94
P PE A+ GRSNVGKSS IN ++ +K+LA TS++PGKTQ +N + +N + VD+PG
Sbjct: 19 PNSPLPEVALAGRSNVGKSSFINKMINRKKLARTSQRPGKTQTLNFYNINDILHFVDVPG 78
Query: 95 YGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLT 154
YGFAK R W + Y R L VL +ID P K D +WL IP+
Sbjct: 79 YGFAKVSKKDREAWGRMIETYLQQRGQLKAVLQIIDIRHDPTKDDQLMYDWLKHFEIPVI 138
Query: 155 FVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+ TKCD K+ KG+ P +++K+ ++ ++ P ++ SS TG+G+DE
Sbjct: 139 IIATKCD--KIPKGKWP-KHVKNIASVLEKD--GGDPIVIFSSETGVGKDE 184
>gi|410462243|ref|ZP_11315835.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984641|gb|EKO40938.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 208
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 31 AKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY-I 89
A P D P+ A+ GRSNVGKS+LIN L +K LA TS PGKT+ +N ++ Y +
Sbjct: 22 ANQLPTLDAPQIALAGRSNVGKSTLINCLAGRKALAKTSATPGKTRSLNFYMAETQGYCL 81
Query: 90 VDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRN 149
VDLPGYG+A+ R W+ + Y ++L V LID +PPQ++D++ +WL
Sbjct: 82 VDLPGYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMELVSWLRSR 141
Query: 150 NIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHHPPWIMTSSVTGLGRDEL 206
IP+ TK +K+ P + ++ ++ RE P PP ++ S TGLGR+ L
Sbjct: 142 RIPVLVALTKAEKV-------PQRDREARKKEWRELAQPAFPP-VVFSGKTGLGREAL 191
>gi|422821312|ref|ZP_16869505.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK353]
gi|422870989|ref|ZP_16917482.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1087]
gi|324991226|gb|EGC23160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK353]
gi|328946143|gb|EGG40288.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1087]
Length = 195
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L NIP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYNIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|422862678|ref|ZP_16909310.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK408]
gi|327474151|gb|EGF19561.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK408]
Length = 195
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L NIP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYNIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|116333988|ref|YP_795515.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus brevis
ATCC 367]
gi|122269328|sp|Q03QN8.1|ENGB_LACBA RecName: Full=Probable GTP-binding protein EngB
gi|116099335|gb|ABJ64484.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 197
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ P PE A++GRSNVGKSSL N L+ + A TS +PGKTQ
Sbjct: 2 EVNHVELVMSAVDPAQYPTTGYPEIALVGRSNVGKSSLTNVLINRNSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R W + Y R+ L GV+ L+DA P +
Sbjct: 62 LNFYNVEDQLYFVDVPGYGYAKVSKTEREKWGQMIETYLTQRDQLRGVISLVDARHAPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL +P V TK DK+ K + IK +L P+ +M S+
Sbjct: 122 DDIQMYRWLAYYELPTLIVATKSDKIARGKWNQAVSQIKKSLEL-----PNTDNIVMFSA 176
Query: 198 VTGLGRDEL 206
+G+D +
Sbjct: 177 PKKMGKDAV 185
>gi|71903337|ref|YP_280140.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS6180]
gi|119369273|sp|Q48U21.1|ENGB_STRPM RecName: Full=Probable GTP-binding protein EngB
gi|71802432|gb|AAX71785.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
Length = 199
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ PKDD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPKDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ + +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPRGKWNKHESVVKKAL-----NFDNSDTFIVFSSVERIGIDD 190
>gi|259503089|ref|ZP_05745991.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri
DSM 16041]
gi|259168955|gb|EEW53450.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri
DSM 16041]
Length = 196
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++ V+ S+ R PK + PE A++GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 2 EVQNVDLTISAVRLDQYPKTNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N ++V Y VD+PGYG+AK R + + Y R+ L G +LL+D P
Sbjct: 62 LNFYVVEDQLYFVDVPGYGYAKVSKKERERFGQMIEQYLTQRDQLRGTILLVDGRHAPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ WL +IP V TK DK+K R + IK L P I+ S+
Sbjct: 122 DDVSMYQWLQYYHIPTLVVATKIDKVKGNAWNRQESLIKKTLGL-----PSANQLILFSA 176
Query: 198 VTGLGRDEL 206
V G+D +
Sbjct: 177 VKKTGKDAV 185
>gi|383754370|ref|YP_005433273.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366422|dbj|BAL83250.1| putative GTP-binding protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 207
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 15/198 (7%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I + ++V S+ + P+ D PE +GRSNVGKSSLIN+L R LA S +PGKTQ I
Sbjct: 7 ITQGQYVASAVKKDQYPEGDLPEIVFIGRSNVGKSSLINSLTRVNNLARVSSQPGKTQTI 66
Query: 79 NHFLVN---------KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLI 129
N F V K++Y+VDLPGYG+AK R WS F + Y LN L V LI
Sbjct: 67 NFFEVGVKIEEAEERKAFYLVDLPGYGYAKTGKEKRKIWSKFIEEYLLNSPRLSFVCQLI 126
Query: 130 DASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH 189
D+ P D++ NWL N +P+ + TK D K+ K R +NI + ++ +
Sbjct: 127 DSRHEPMASDVEMFNWLVDNGLPVLIIATKVD--KIGKNERA-KNIAAIKRKLGIKEISV 183
Query: 190 PPWIMTSSVTGLGRDELL 207
P+ SS+ GR +LL
Sbjct: 184 LPY---SSLKNEGRSDLL 198
>gi|323351644|ref|ZP_08087298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis VMC66]
gi|322122130|gb|EFX93856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis VMC66]
Length = 195
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L NIP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLRYYNIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|288553615|ref|YP_003425550.1| GTP-binding protein YsxC [Bacillus pseudofirmus OF4]
gi|288544775|gb|ADC48658.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pseudofirmus
OF4]
Length = 195
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E + + + P PE A+ GRSNVGKSS IN ++ +K LA TS++PGKTQ
Sbjct: 2 KVTKAELFTVAVKPEQYPNTPLPEIALAGRSNVGKSSFINKMINRKSLARTSQRPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+ + VD+PGYGFAK R W + Y RE L V+ LID P +
Sbjct: 62 LNFYAINEQLHFVDVPGYGFAKVSKKEREAWGKMIETYIQQREQLRAVVQLIDVRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D WL +IP+ + TKCDK+ P + ++I E H P ++
Sbjct: 122 DDKLMYEWLKHFDIPVIVIATKCDKI-------PKGKWQKHLRVISEELSKHEEDPLLLF 174
Query: 196 SSVTGLGRDE 205
SS +G G+++
Sbjct: 175 SSESGHGKEQ 184
>gi|83319725|ref|YP_424232.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|119369215|sp|Q2SSN1.1|ENGB_MYCCT RecName: Full=Probable GTP-binding protein EngB
gi|83283611|gb|ABC01543.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 196
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR++L GV LL+D P
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDSIKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ +L NIP+ + TK DK+K +E IK+ +++I+E N+ +I
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLK------KNEYIKN-EKMIKEAINFYQEDDFIKI 174
Query: 196 SSVT 199
S++
Sbjct: 175 SNLN 178
>gi|373455368|ref|ZP_09547204.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
succinatiphilus YIT 11850]
gi|371935008|gb|EHO62781.1| ribosome biogenesis GTP-binding protein YsxC [Dialister
succinatiphilus YIT 11850]
Length = 213
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 18/195 (9%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL- 82
+V+++ D + E A +GRSNVGKSSLIN+L +K+LA S++PGKT+ IN++
Sbjct: 17 YVRAAVNRSQYVNDGKKEIAFIGRSNVGKSSLINSLCGRKKLAFVSREPGKTRTINYYAI 76
Query: 83 ----------VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
V + WY+VDLPGYGFAK + WS+F Y + SL + LLID
Sbjct: 77 QSRRMENEEEVRQDWYLVDLPGYGFAKTSQQNKDSWSAFIADYLEHSPSLQMIGLLIDLR 136
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
P ID+ WL L + TK DK+K +E +K+ ++L+ + +P P
Sbjct: 137 HPGLPIDMKAYEWLRSIAPSLQIIGTKGDKLK------RNELVKN-KKLLEKYFPGDFPP 189
Query: 193 IMTSSVTGLGRDELL 207
I S++TG GR+ELL
Sbjct: 190 IAYSALTGEGREELL 204
>gi|225019948|ref|ZP_03709140.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum
DSM 5476]
gi|224947312|gb|EEG28521.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum
DSM 5476]
Length = 200
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EFV S G P +R E A GRSNVGKSS+IN L +K LA S PGKT IN +
Sbjct: 8 EFVTSYGLLSQIPPSERLEIAFAGRSNVGKSSMINKLFNRKGLARVSSVPGKTATINFYQ 67
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
Y VDLPGYG+AK + WS +GYF + + V+ LID PP K+DL
Sbjct: 68 TGDEVYFVDLPGYGYAKVAKSEKQRWSELIEGYFHDDRDIALVVQLIDMRHPPTKLDLQM 127
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQ-QLIRENYPHHPPWIMT--SSVT 199
++L + IP V TK DK+ +N ++ + + ++ P+ M SS T
Sbjct: 128 IDFLIESEIPFLIVLTKADKLS--------KNQQAVRLEALQTELPYADQITMLPFSSET 179
Query: 200 GLGRDEL 206
G+G +EL
Sbjct: 180 GMGVEEL 186
>gi|256619397|ref|ZP_05476243.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
gi|256598924|gb|EEU18100.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
Length = 193
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 88/158 (55%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ E V S+ K P+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ +
Sbjct: 3 VHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +L+ + + VD+PGYG+AK R W + Y RE L V+ LID PP +
Sbjct: 63 NFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
D+ +L ++P+ V TK DK+ K + + IK
Sbjct: 123 DIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIK 160
>gi|427429275|ref|ZP_18919310.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
gi|425880468|gb|EKV29164.1| GTP-binding protein EngB [Caenispirillum salinarum AK4]
Length = 226
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
KE FV + P++ PE GRSNVGKSSLINAL + +LA TS PG+TQ +N
Sbjct: 32 KEATFVLGAAALVQIPEEPLPEVCFAGRSNVGKSSLINALTNRNKLARTSDTPGRTQELN 91
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F + I DLPGYGFAKAP W++ T Y R L V++L+D+ + D
Sbjct: 92 FFNLGDRLMIADLPGYGFAKAPKEKVKQWTAVTMAYLQGRAQLRRVMVLVDSRHGLKDSD 151
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
D L + + V TK DK+ KG + ++ + Q + ++ HP I TSS
Sbjct: 152 HDVMKMLDQAAVNYQVVLTKIDKL---KGNQAEKRVAETQDALAKHVAAHPVVIPTSSAK 208
Query: 200 GLGRDELLLHMSQL 213
G G EL + L
Sbjct: 209 GDGIPELRAEIGAL 222
>gi|226953864|ref|ZP_03824328.1| GTPase, involved in coordination of cell cycle (EngB)
[Acinetobacter sp. ATCC 27244]
gi|226835347|gb|EEH67730.1| GTPase, involved in coordination of cell cycle (EngB)
[Acinetobacter sp. ATCC 27244]
Length = 258
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 7/211 (3%)
Query: 9 VVGPYAGHSQ--IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELA 66
+ YA HS +++ EF+ S+ + C +D E A GRSN GKSS INAL KK+LA
Sbjct: 29 ALTEYAVHSLNWLRQAEFLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLA 88
Query: 67 LTSKKPGKTQLINHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGV 125
SKKPG+TQ+IN F L N +VDLPGYG+A P+ ++ W + Y ++R+SL G+
Sbjct: 89 RASKKPGRTQMINFFSLGNPDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGL 148
Query: 126 LLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
+LL+D P Q DL W ++ + + TK DK+ + ++K + ++ +
Sbjct: 149 VLLMDIRHPLQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLD 208
Query: 186 YPHHPPWIMTSSVTGLGRDELLLHMSQLRNY 216
+ + SS+ +G +EL M+ NY
Sbjct: 209 FSIQ----LFSSLNRIGLEELASVMAGRLNY 235
>gi|268318043|ref|YP_003291762.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
gi|262335577|gb|ACY49374.1| small GTP-binding protein [Rhodothermus marinus DSM 4252]
Length = 198
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
F +S R +D P D PE A GRSNVGKSSL+NAL+R LA TS PGKT+ +N +
Sbjct: 6 ARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFY 65
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
VN+ Y VDLPGYG+A+ R W Y R +L V+ LID+ PP +D
Sbjct: 66 RVNEQLYFVDLPGYGYARTSQEERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEA 125
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+ + ++P TK DK+ G R + ++ ++ + + P I TS+ TGL
Sbjct: 126 MMDLMRGQHVPYLIALTKADKV---SGNRRAQAVREVERAL-QARAMEVPIIPTSAHTGL 181
Query: 202 GRDEL 206
G +L
Sbjct: 182 GLRDL 186
>gi|357639562|ref|ZP_09137435.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis 2285-97]
gi|418416327|ref|ZP_12989526.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis FB127-CNA-2]
gi|357588016|gb|EHJ57424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis 2285-97]
gi|410874145|gb|EKS22076.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
urinalis FB127-CNA-2]
Length = 199
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDIPEIALAGRSNVGKSSFINSLLGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y + R++L V+ L+D P K D+ +L
Sbjct: 77 LRFVDVPGYGYAKVSKKERERWGKMIEEYLVTRDNLRAVVSLVDLRHEPSKDDVQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + IK Q + ++ +I+ SSV +G +E
Sbjct: 137 KYYDIPVIIVATKADKIPRGKWNKHESLIKKKLQFDKTDH-----FILFSSVDKIGIEE 190
>gi|239907036|ref|YP_002953777.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
magneticus RS-1]
gi|239796902|dbj|BAH75891.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1]
Length = 208
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 99/174 (56%), Gaps = 10/174 (5%)
Query: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY-IVDLP 93
P D P+ A+ GRSNVGKS+LIN L +K LA TS PGKT+ +N ++ Y +VDLP
Sbjct: 26 PTLDAPQIALAGRSNVGKSTLINCLAGRKSLAKTSATPGKTRSLNFYMAETQGYCLVDLP 85
Query: 94 GYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPL 153
GYG+A+ R W+ + Y ++L V LID +PPQ++D++ +WL IP+
Sbjct: 86 GYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMELVSWLRSRRIPV 145
Query: 154 TFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHHPPWIMTSSVTGLGRDEL 206
TK +K+ P + ++ ++ RE P PP ++ S TGLGR+ L
Sbjct: 146 LVALTKAEKV-------PQRDREARKKEWRELAQPAFPP-VVFSGKTGLGREAL 191
>gi|328943788|ref|ZP_08241253.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM
15829]
gi|327491757|gb|EGF23531.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM
15829]
Length = 203
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q ++ F + G A+ P PE GRSNVGKSSLIN L+++K LA TS +PGKT
Sbjct: 12 QYEQAHFEAAYGTAQQLPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTAN 71
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F V+ + VDLPGYGFAK R WSS GYF + S V+ LID + Q+
Sbjct: 72 INFFNVDGIRF-VDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRIDAQQ 130
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D D ++ +P FTK DK+ +K + + +L + I+TS+
Sbjct: 131 LDKDMLTYVIHEELPYVVAFTKADKLTHSKA------LAARTKLCKALEVPQDKTIITSA 184
Query: 198 VTGLGRDEL 206
TG G +L
Sbjct: 185 ETGEGMADL 193
>gi|345304334|ref|YP_004826236.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
gi|345113567|gb|AEN74399.1| GTP-binding protein engB [Rhodothermus marinus SG0.5JP17-172]
Length = 198
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
F +S R +D P D PE A GRSNVGKSSL+NAL+R LA TS PGKT+ +N +
Sbjct: 6 ARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQLNFY 65
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
VN+ Y VDLPGYG+A+ R W Y R +L V+ LID+ PP +D
Sbjct: 66 RVNEQLYFVDLPGYGYARTSQQERRLWGRLITRYLQERPTLALVVHLIDSRHPPTPLDEA 125
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+ + ++P TK DK+ G R + ++ ++ ++ P I TS+ TGL
Sbjct: 126 MMDLMRGQHVPYLIALTKTDKV---SGNRRAQAVREVERALQAR-AMEVPIIPTSAHTGL 181
Query: 202 GRDELLLHMSQL 213
G +L + Q+
Sbjct: 182 GLRDLWRWIEQV 193
>gi|423389220|ref|ZP_17366446.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG1X1-3]
gi|423395238|ref|ZP_17372439.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-1]
gi|423406113|ref|ZP_17383262.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-3]
gi|423417613|ref|ZP_17394702.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-1]
gi|423484045|ref|ZP_17460735.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6X1-2]
gi|423612672|ref|ZP_17588533.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD107]
gi|401107191|gb|EJQ15144.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-1]
gi|401139620|gb|EJQ47180.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6X1-2]
gi|401244660|gb|EJR51019.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD107]
gi|401642113|gb|EJS59826.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG1X1-3]
gi|401655053|gb|EJS72589.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-1]
gi|401660464|gb|EJS77945.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-3]
Length = 198
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P K
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH--PPWIMT 195
D+ ++L IP + TK DK+ P + ++++E ++
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKI-------PKGKWQKHLKVVKETLAVEIGDEIVLF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|262198758|ref|YP_003269967.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
gi|262082105|gb|ACY18074.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum
DSM 14365]
Length = 198
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 105/191 (54%), Gaps = 11/191 (5%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
K EFV S+ + P PE A GRSNVGKSSLIN LV LA TS+ PG+T+L+N
Sbjct: 4 KSAEFVTSAAKPSQFPAPTLPEIAFAGRSNVGKSSLINTLVDIAGLARTSRTPGRTRLVN 63
Query: 80 HFLV----NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
F + K VDLPGYG+AK P R W + Y +R +L +++LIDA
Sbjct: 64 WFQIVPAKGKPMLFVDLPGYGYAKVPTAMRASWRPLIEDYLSDRATLRALVVLIDARRGA 123
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
Q+ ++D +WL +P V TK DK+ K R+P + ++ R+ PP I+
Sbjct: 124 QEEEIDLLDWLRSAEVPAITVVTKADKLSKNK-RKP-----AAAEIQRDLGLRRPP-ILF 176
Query: 196 SSVTGLGRDEL 206
SS++G G ++L
Sbjct: 177 SSLSGDGLNDL 187
>gi|167748794|ref|ZP_02420921.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662]
gi|167651764|gb|EDR95893.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes caccae
DSM 14662]
Length = 204
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P ++ PE A G+SNVGKSSLINAL+ +K A S +PGKTQ I
Sbjct: 3 IKSVNLETVCGITSKLPDNELPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N+ Y VDLPGYG+AK + + W + + Y + L V LLID P K
Sbjct: 63 NYYNINEELYYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ N + TK DK+K + + P +++K +Q +R N P SS+
Sbjct: 123 DVMMYDWIVHNGYHPVIIATKSDKLK--RSQLP-KHVKEIRQELRLN--KETPVFPFSSL 177
Query: 199 TGLGRDEL 206
+ GRDE+
Sbjct: 178 SKQGRDEI 185
>gi|158521131|ref|YP_001529001.1| HSR1-like GTP-binding protein [Desulfococcus oleovorans Hxd3]
gi|238686898|sp|A8ZXG6.1|ENGB_DESOH RecName: Full=Probable GTP-binding protein EngB
gi|158509957|gb|ABW66924.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3]
Length = 197
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 8/196 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ EFV S+ + P D PE A GRSNVGKSS+IN LV +K L TS PGKT+LI
Sbjct: 3 IRSAEFVISAVQPSQYPDTDLPEIAFAGRSNVGKSSMINLLVNRKNLVKTSSTPGKTRLI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +N VDLPGYG+AK + W + Y +R++L G++LL+D P++
Sbjct: 63 NFFDINGQLMFVDLPGYGYAKVSRKEQKTWGPMVERYLSSRKTLRGLMLLMDLRREPRED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM-KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+ W +IP V TK DK K A RR E + R I+ S+
Sbjct: 123 EFLMMQWCAHYDIPWKMVLTKADKFKKTAADRRRHE-------IARAVGIGADEMILFST 175
Query: 198 VTGLGRDELLLHMSQL 213
+ +GRD L ++++
Sbjct: 176 LQKMGRDPALETIARM 191
>gi|420264700|ref|ZP_14767322.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus sp. C1]
gi|394767380|gb|EJF48039.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus sp. C1]
Length = 194
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E E V S+ P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHEAEIVISAVSPAQYPDTPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ V TK DK+ K + + IK ++ +I+ SS
Sbjct: 122 EDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESMIKKAL-----SFDPADTFILFSS 176
Query: 198 VTGLGRDE 205
+T G++E
Sbjct: 177 ITKQGKEE 184
>gi|357403764|ref|YP_004915688.1| GTP-binding protein [Methylomicrobium alcaliphilum 20Z]
gi|351716429|emb|CCE22089.1| Putative GTP-binding protein [Methylomicrobium alcaliphilum 20Z]
Length = 202
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 86/149 (57%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ +F+ S+ KD P+D E A GRSN GKSS IN L +K LA SK PG+TQL+N
Sbjct: 7 QAKFINSAPHVKDAPEDIGLEVAFAGRSNAGKSSAINTLTGQKSLARISKTPGRTQLLNF 66
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + ++ VDLPGYG+AK P + W + Y NR++L G++L++D P + D
Sbjct: 67 FSITETTRFVDLPGYGYAKVPLEIKKQWHRMIETYLNNRKTLCGIVLVMDIRHPLTEFDR 126
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGR 169
+W + +PL + TK DK+K +
Sbjct: 127 QMVDWCKQTRLPLHILLTKADKLKFGAAK 155
>gi|114765425|ref|ZP_01444540.1| GTP-binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542268|gb|EAU45298.1| GTP-binding protein [Roseovarius sp. HTCC2601]
Length = 217
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV+F+K P DDR E GRSNVGKSSLINAL +K +A S PG+TQ IN
Sbjct: 27 EVDFLKGVVGMDGLPPDDRVEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINF 86
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + + Y+VDLPGYGFA AP W K Y R SL +LIDA + +D
Sbjct: 87 FTLGEERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRVSLRRAFVLIDARHGVKPVDE 146
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP----WIMTS 196
+ L R+ + V TK DK+K KGR K Q +RE HP ++TS
Sbjct: 147 EIMTLLDRSAVTFQAVLTKADKVK-EKGRE-----KVLAQ-VREKLAKHPAAFPELVLTS 199
Query: 197 SVTGLG 202
S G G
Sbjct: 200 SEKGDG 205
>gi|308233841|ref|ZP_07664578.1| small GTP-binding protein domain [Atopobium vaginae DSM 15829]
Length = 195
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q ++ F + G A+ P PE GRSNVGKSSLIN L+++K LA TS +PGKT
Sbjct: 4 QYEQAHFEAAYGTAQQLPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTAN 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F V+ + VDLPGYGFAK R WSS GYF + S V+ LID + Q+
Sbjct: 64 INFFNVDGIRF-VDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRIDAQQ 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D D ++ +P FTK DK+ +K + + +L + I+TS+
Sbjct: 123 LDKDMLTYVIHEELPYVVAFTKADKLTHSKA------LAARTKLCKALEVPQDKTIITSA 176
Query: 198 VTGLGRDEL 206
TG G +L
Sbjct: 177 ETGEGMADL 185
>gi|354808317|ref|ZP_09041743.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
curvatus CRL 705]
gi|354513193|gb|EHE85214.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
curvatus CRL 705]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 104/191 (54%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +VE V S+ A P D PE A+ GRSNVGKSSLIN L+ +K A TS KPGKTQ
Sbjct: 2 EVHDVEMVMSAVAASQYPTDQLPEIALSGRSNVGKSSLINKLINRKSYARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y +R +L G++ LID P
Sbjct: 62 LNFYRVENELYFVDVPGYGYAKVSKKQREKFGQIIEAYLTSRSNLKGLISLIDGRHEPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ + +IP+ V TK DK+ K R +++I+E +P ++
Sbjct: 122 DDIAMYVFAKYYDIPVLVVATKMDKISTGKWNRQ-------EKIIKEALDFNPVDQFVCF 174
Query: 196 SSVTGLGRDEL 206
S++TG G++ +
Sbjct: 175 SALTGAGKETV 185
>gi|19745954|ref|NP_607090.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS8232]
gi|24418369|sp|Q8P1C8.1|ENGB_STRP8 RecName: Full=Probable GTP-binding protein EngB
gi|19748113|gb|AAL97589.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
MGAS8232]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R +W + Y +R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAEWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPRGKWNKHESVVKKAL-----NFDKSDTFIVFSSVERIGIDD 190
>gi|313890490|ref|ZP_07824118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudoporcinus SPIN 20026]
gi|416851047|ref|ZP_11908388.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudoporcinus LQ 940-04]
gi|313121007|gb|EFR44118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudoporcinus SPIN 20026]
gi|356740726|gb|EHI65949.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudoporcinus LQ 940-04]
Length = 199
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDIPEVALAGRSNVGKSSFINTILGRKNLARTSAKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +NRE+L V+ L+D P D+ +L
Sbjct: 77 IRFVDVPGYGYAKVSKTERARWGKMIEEYLVNRENLRVVVSLVDLRHEPSGEDVQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +K + N+ +I+ SSV LG D+
Sbjct: 137 KYYEIPVIVVATKADKIPRGKWNKHEAMVKK-----KLNFDSSDQFIIFSSVNRLGIDQ 190
>gi|317153283|ref|YP_004121331.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
aespoeensis Aspo-2]
gi|316943534|gb|ADU62585.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio
aespoeensis Aspo-2]
Length = 212
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 8/188 (4%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ +E VK+ K D P+ A+ GRSNVGKSSL+N L +K LA S KPGKT+ +N
Sbjct: 3 RTIELVKTIYEIKQLESLDEPQIALAGRSNVGKSSLVNRLAGRKSLAKISSKPGKTRSLN 62
Query: 80 HFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
++ VN +Y+VDLPGYG+A+ R W + Y L V++L+DA + PQK+
Sbjct: 63 YYRVNPDGFYLVDLPGYGYARCSQSEREKWGKLIEAYMTANPGLKAVVVLLDARLTPQKL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
DL+ ++L IP+ V TK DK K + R +N ++ ++++ P P ++ SS
Sbjct: 123 DLELTSYLRGLGIPVIPVLTKSDKPK-QRERAALQN--QWKDILQQ--PRLP--LLFSSK 175
Query: 199 TGLGRDEL 206
TG+G D+L
Sbjct: 176 TGMGEDKL 183
>gi|392949119|ref|ZP_10314714.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
gi|392435708|gb|EIW13637.1| ribosome biogenesis GTPase, YsxC/EngB family [Lactobacillus
pentosus KCA1]
Length = 197
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ P PE + GRSNVGKSSLIN L+ + A TS +PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R W + Y RE+L GV++L+DA P K
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRETLRGVVILVDARHAPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ +PL V TK DK+ K + + IK N+ +I S+
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSDKIPRGKWNKQESLIKKTL-----NFQPEDDFIAFSA 176
Query: 198 VTGLGRDEL 206
T G+D +
Sbjct: 177 KTKEGKDAV 185
>gi|317470367|ref|ZP_07929758.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp.
3_2_56FAA]
gi|316902171|gb|EFV24094.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp.
3_2_56FAA]
Length = 204
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P ++ PE A G+SNVGKSSLINAL+ +K A S +PGKTQ I
Sbjct: 3 IKSVNLETVCGITSKLPDNEFPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N+ Y VDLPGYG+AK + + W + + Y + L V LLID P K
Sbjct: 63 NYYNINEELYYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ N + TK DK+K + + P +++K +Q +R N P SS+
Sbjct: 123 DVMMYDWIVHNGYHPVIIATKSDKLK--RSQLP-KHVKEIRQELRLN--KETPVFPFSSL 177
Query: 199 TGLGRDEL 206
+ GRDE+
Sbjct: 178 SKQGRDEI 185
>gi|416217117|ref|ZP_11624066.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169]
gi|416239163|ref|ZP_11631713.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1]
gi|326560968|gb|EGE11333.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169]
gi|326567351|gb|EGE17466.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1]
Length = 224
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + +F+ S+ K CP+D E A GRSN GKSS IN + +K+LA +SK PG+TQ+
Sbjct: 9 QIHQTKFLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQM 68
Query: 78 INHFLV-NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
IN F+V ++ IVDLPGYG+A P+ ++ W + Y ++R+SL G++L+ D P +
Sbjct: 69 INFFMVGDEQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHPLK 128
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D +W +P+ + TK DK+K +G + + + +QL + P + S
Sbjct: 129 YFDEQMLHWAKDGKLPVHVLLTKSDKLK--RGAQKSALLATKKQLEALDLPFSIQ--LFS 184
Query: 197 SVTGLGRDELLL 208
++ G DEL L
Sbjct: 185 ALKKEGMDELAL 196
>gi|325570036|ref|ZP_08145961.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus
casseliflavus ATCC 12755]
gi|325156864|gb|EGC69035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus
casseliflavus ATCC 12755]
Length = 200
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ E E V S+ P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 8 KVHEAEIVISAVSPAQYPDTPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 67
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 68 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 127
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP--WIMT 195
D+ +L IP+ V TK DK+ P + +I++ P +I+
Sbjct: 128 EDVQMYEFLKYYEIPVIVVATKADKI-------PRGKWNKHESMIKKALSFDPADTFILF 180
Query: 196 SSVTGLGRDE 205
SS+T G++E
Sbjct: 181 SSITKQGKEE 190
>gi|335045177|ref|ZP_08538200.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333758963|gb|EGL36520.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 211
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ VE G PK +RPEF + GRSNVGKSS INALV +K A TS PGKT+ I
Sbjct: 3 IRSVELPFVCGVKSTLPKTERPEFVLAGRSNVGKSSFINALVERKSFARTSSTPGKTRTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN S+Y+VDLPGYG+AK V + W + Y + E + V+LL+DA P +
Sbjct: 63 NFYNVNDSFYLVDLPGYGYAKTGPVEQEKWDRMIRRYLESGEDIEEVVLLLDARRIPNEK 122
Query: 139 DLDCANW-LGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-- 195
DL +W L V TK DK+K + E K+ ++ IRE +M
Sbjct: 123 DLQMFSWILSTTGYEPIVVITKMDKLKRS------ERAKALKE-IREKLGASKECMMIPF 175
Query: 196 SSVTGLGRDELL 207
SS T G+ E L
Sbjct: 176 SSETKEGKIEFL 187
>gi|387130564|ref|YP_006293454.1| GTP-binding protein EngB [Methylophaga sp. JAM7]
gi|386271853|gb|AFJ02767.1| GTP-binding protein EngB [Methylophaga sp. JAM7]
Length = 206
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 4/200 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ ++ S+ + P D E A GRSN GKSS IN + + LA SK PG+TQ+IN
Sbjct: 6 RRAQYTGSAAQLDQLPADTGIEVAFAGRSNAGKSSAINTITQINGLARISKTPGRTQMIN 65
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++++ +VDLPGYGFAK P+ ++ W + Y +R+SL G++L++D P ++ D
Sbjct: 66 FFTLDETRALVDLPGYGFAKVPEKMKLQWQATLGKYLESRQSLKGLVLMMDCRHPMKEFD 125
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
L W +PL + TK DK+ G + ++ QQL R + P + SS+
Sbjct: 126 LQILLWAKAAALPLHILLTKSDKLSRGAGNGVLQKVR--QQLQRTDIPATVQ--LFSSLN 181
Query: 200 GLGRDELLLHMSQLRNYWDQ 219
GRD+ + + + N +Q
Sbjct: 182 KSGRDQAISQLDEWFNLPEQ 201
>gi|333369682|ref|ZP_08461788.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp.
1501(2011)]
gi|332970221|gb|EGK09214.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp.
1501(2011)]
Length = 234
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
+ P S + + ++++ EF+ S+ K CP D E A GRSN GKSS IN L
Sbjct: 16 VAPESAADLSHLSPRKRLEQTEFLMSAPTFKLCPADTGYEVAFAGRSNAGKSSAINVLTN 75
Query: 62 KKELALTSKKPGKTQLINHFLV-NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
+++LA +SK PG+TQ+IN F + N+ +VDLPGYG+A P+ ++ W + + Y ++RE
Sbjct: 76 QRQLARSSKTPGRTQMINFFSIGNEEARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRE 135
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI 175
SL G++LL+D+ P + D +W +P+ + TK DK K P +NI
Sbjct: 136 SLAGLVLLMDSRHPLKFFDEQMLHWAKDGELPVHVLLTKADKFKYG----PAKNI 186
>gi|386392642|ref|ZP_10077423.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
sp. U5L]
gi|385733520|gb|EIG53718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfovibrio
sp. U5L]
Length = 209
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 8/193 (4%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+++ V ++ + P P+ A+ GRSNVGKS+L+N L +K LA S PGKT+ +N
Sbjct: 12 DLDLVVTAYLSDQIPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNF 71
Query: 81 FLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
+ + Y +VDLPGYG+A+ R W+ + Y + L V+ L+D +PPQ++D
Sbjct: 72 YQARATGYCLVDLPGYGYARCSMAERDKWAKLIEAYLRKTDQLRAVVALVDCRLPPQRLD 131
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
++ +WL IP+ V TK DK K R + K +++L + P PP I+ S T
Sbjct: 132 IELVDWLRARRIPMIMVLTKADK---CKQRDREARKKEWRELAQ---PAFPP-ILFSGKT 184
Query: 200 GLGRDELLLHMSQ 212
GLGR+ L +++
Sbjct: 185 GLGREALCRVLAE 197
>gi|172058153|ref|YP_001814613.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium
sibiricum 255-15]
gi|407477828|ref|YP_006791705.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
gi|229807534|sp|B1YJV8.1|ENGB_EXIS2 RecName: Full=Probable GTP-binding protein EngB
gi|171990674|gb|ACB61596.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15]
gi|407061907|gb|AFS71097.1| GTP-binding protein EngB [Exiguobacterium antarcticum B7]
Length = 193
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I + +F+ S + P+ PE A+ GRSNVGKSS IN LV++K LA TS KPGKTQ
Sbjct: 2 KIYKADFITSGVNPEHYPEPLLPEVALAGRSNVGKSSFINKLVQRKALARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F +N VD+PGYG+AK R W + YF RE L GV+LL+D P
Sbjct: 62 LNFFNINDEVMFVDVPGYGYAKVSKTEREAWGKMMEKYFTTREILKGVVLLVDIRHEPSA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L ++ + V TK DK+K +G+R D+ I + ++ ++ + +I SS
Sbjct: 122 DDVIMYDFLKYYDLSVIVVATKLDKIK--RGQR-DKQIAAIKRKLQ--FDGQDTFIPFSS 176
Query: 198 VTGLGRD 204
TG G D
Sbjct: 177 ETGEGVD 183
>gi|414564101|ref|YP_006043062.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847166|gb|AEJ25378.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 200
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F V+
Sbjct: 18 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 77
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
+VD+PGYG+AK R W + Y R++L V+ L+D P + D+ +L
Sbjct: 78 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 137
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ + + + +K N+ +I+ SSV +G DE
Sbjct: 138 KYYEIPVIIVATKADKVPRGRWNKHESMVKK-----SLNFDQTDAFIIFSSVERIGIDE 191
>gi|289168391|ref|YP_003446660.1| hypothetical protein smi_1558 [Streptococcus mitis B6]
gi|288907958|emb|CBJ22798.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 197
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 10 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 69
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 70 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQ 129
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 130 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 184
Query: 202 GRDE 205
G DE
Sbjct: 185 GMDE 188
>gi|291548431|emb|CBL21539.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp.
SR1/5]
Length = 203
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P RPE A G+SNVGKSSLIN L+ +K LA TS +PGKTQ I
Sbjct: 3 IKNVSLDIVCGITSKIPDTGRPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N++ Y+VDLPGYG+AK + W +GY N + L V LL+D P
Sbjct: 63 NFYNINEAMYLVDLPGYGYAKVSAAEKEKWGKMIEGYLHNSKELRAVFLLVDIRHKPSAN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D +W+ N + TK DK+K ++ + + I+ I P + S+
Sbjct: 123 DKQMYDWICHNGYEPVIIATKLDKLKRSQVAKSLKEIR-----IGLGLPKEGKILPFSAE 177
Query: 199 TGLGRDELLLHMSQL 213
T GRDE+ + +L
Sbjct: 178 TKQGRDEIWALIDEL 192
>gi|42560838|ref|NP_975289.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. mycoides SC str. PG1]
gi|81829403|sp|Q6MTV5.1|ENGB_MYCMS RecName: Full=Probable GTP-binding protein EngB
gi|42492334|emb|CAE76931.1| GTP-binding protein [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|301320730|gb|ADK69373.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. mycoides SC str. Gladysdale]
Length = 196
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 4/166 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ SS + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSSANKSNWIDDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR +L GV LL+D P
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRRNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK---SFQQ 180
D+ +L NIP+ + TK DK+K ++ + ++ IK SF Q
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYVKNEKMIKETISFYQ 167
>gi|339442439|ref|YP_004708444.1| putative GTPase [Clostridium sp. SY8519]
gi|338901840|dbj|BAK47342.1| predicted GTPase [Clostridium sp. SY8519]
Length = 250
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ E G P DRPE A G+SNVGKSSLIN L+ +K LA TS PGKTQ I
Sbjct: 3 IRKAELETVCGYTSRIPDHDRPEIAFAGKSNVGKSSLINCLLERKSLARTSSSPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN Y+ DLPGYG+AK + W + Y + L V LL+D PQ+
Sbjct: 63 NFYNVNDQMYLTDLPGYGYAKITLAEKEKWGEMIEHYLHTSQQLCAVFLLLDIRHAPQEN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D+ W+ + TK DK+K + R LIRE + P I S
Sbjct: 123 DVRMYEWMEYQGYAPIIIATKKDKIKKTEVDRQ-------LNLIRETLHMPEDAAVIPFS 175
Query: 197 SVTGLGRDELLLHMSQL 213
+ T GR+E+ M QL
Sbjct: 176 AETREGREEIWALMEQL 192
>gi|409352083|ref|ZP_11234530.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
equicursoris CIP 110162]
gi|407876319|emb|CCK86588.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
equicursoris CIP 110162]
Length = 197
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 90/146 (61%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ +F S+ +A P+D E A+ GRSNVGKSSLIN ++++K LA TS PGKTQ +
Sbjct: 3 IKQSDFAVSAVKASQYPQDGLDEIALAGRSNVGKSSLINTILQRKNLARTSSSPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN ++Y+VD+PGYG+AK R ++ + Y R L G++LLID P
Sbjct: 63 NFYRVNDNFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEPTAD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ ++ N+P+ V TK DK+K
Sbjct: 123 DIAMYDYAQYLNLPILVVATKMDKIK 148
>gi|47566659|ref|ZP_00237481.1| GTP-binding protein [Bacillus cereus G9241]
gi|47556689|gb|EAL15021.1| GTP-binding protein [Bacillus cereus G9241]
Length = 198
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P+ D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPEGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L +IP + TK DK+ K ++ ++K ++ + + ++ SS
Sbjct: 122 DDVMMYDFLKHYDIPTIIIATKADKIPKGKWQK---HLKVVKETL--DIESGDEVVLFSS 176
Query: 198 VTGLGRDE 205
TGLG++E
Sbjct: 177 ETGLGKEE 184
>gi|225868472|ref|YP_002744420.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|259645907|sp|C0MEW6.1|ENGB_STRS7 RecName: Full=Probable GTP-binding protein EngB
gi|225701748|emb|CAW99123.1| putative GTP-binding protein [Streptococcus equi subsp.
zooepidemicus]
Length = 199
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F V+
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
+VD+PGYG+AK R W + Y R++L V+ L+D P + D+ +L
Sbjct: 77 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ + + + +K N+ +I+ SSV +G DE
Sbjct: 137 KYYEIPVIIVATKADKVPRGRWNKHESMVKK-----SLNFDQTDAFIIFSSVERIGIDE 190
>gi|403384274|ref|ZP_10926331.1| GTP-binding protein [Kurthia sp. JC30]
Length = 206
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ + S+ R + P+D PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ
Sbjct: 2 KVHNVDMIMSAVRPEQYPEDGYPEFALAGRSNVGKSSFINRMIGRKALARISAKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y R L V+ +ID P
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKSEREAWGKMIETYLTGRRPLKAVVQIIDLRHEPSD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L IP + TK DK+K K N+K + ++ ++ P I+ SS
Sbjct: 122 DDCMMYDFLKHYGIPTILIATKADKVKKGKWAH---NLKVIKNVLDKD--PSDPIILFSS 176
Query: 198 VTGLGRDE 205
TG+G DE
Sbjct: 177 ETGMGYDE 184
>gi|270291412|ref|ZP_06197634.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici 7_4]
gi|304385125|ref|ZP_07367471.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici DSM 20284]
gi|418069408|ref|ZP_12706686.1| GTP-binding protein YsxC [Pediococcus acidilactici MA18/5M]
gi|270280258|gb|EFA26094.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici 7_4]
gi|304329319|gb|EFL96539.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
acidilactici DSM 20284]
gi|357536877|gb|EHJ20905.1| GTP-binding protein YsxC [Pediococcus acidilactici MA18/5M]
Length = 195
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE S+ + + P+ PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVELQISAVKPEQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R W + Y +R+ L GV+ L+DA P
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGRMIEKYLTSRKELKGVISLVDARHDPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK N+ + M S+
Sbjct: 122 DDISMYQYLRYYDIPVLVVATKSDKIARGKWNQHESRIKKVL-----NFDQQDAFQMFSA 176
Query: 198 VTGLGRDEL 206
T G+D +
Sbjct: 177 QTKFGKDAI 185
>gi|398311679|ref|ZP_10515153.1| GTP-binding protein YsxC [Bacillus mojavensis RO-H-1]
Length = 195
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD--KIPKGKW-DKHAKVVRQTL--NIDPEDELILYSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|334132076|ref|ZP_08505837.1| Putative GTP-binding protein [Methyloversatilis universalis FAM5]
gi|333442722|gb|EGK70688.1| Putative GTP-binding protein [Methyloversatilis universalis FAM5]
Length = 207
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 84/147 (57%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S + F S + P PE A GRSN GKSS IN LV LA SK PG+TQ
Sbjct: 3 SLFRGAAFHISVAKPTGLPAAAGPEIAFAGRSNAGKSSAINTLVGHTRLAFVSKTPGRTQ 62
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN+F + K ++VDLPGYGFA+ P R W+ + Y RESLVG++L++D+ P
Sbjct: 63 LINYFKLVKGGFLVDLPGYGFAQVPPEVRRAWAGLIERYLKERESLVGLVLIMDSRHPLT 122
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKM 163
++D + W ++ P+ + TK DK+
Sbjct: 123 ELDWNMIQWFSQSGKPMHVLLTKADKL 149
>gi|311069312|ref|YP_003974235.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus
1942]
gi|419820031|ref|ZP_14343648.1| GTP-binding protein YsxC [Bacillus atrophaeus C89]
gi|310869829|gb|ADP33304.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus
1942]
gi|388475884|gb|EIM12590.1| GTP-binding protein YsxC [Bacillus atrophaeus C89]
Length = 195
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSDIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDDLHFVDVPGYGFAKVSKTEREAWGRMIETYITTREELKAVVQIVDLRHAPSA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVSMYDFLKHYGIPVIIIATKAD--KIPKGKW-DKHAKVVRQTL--NIEPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|357633022|ref|ZP_09130900.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp.
FW1012B]
gi|357581576|gb|EHJ46909.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp.
FW1012B]
Length = 209
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 8/193 (4%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+++ V ++ + P P+ A+ GRSNVGKS+L+N L +K LA S PGKT+ +N
Sbjct: 12 DLDLVVTAYLSDQIPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNF 71
Query: 81 FLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
+ + Y +VDLPGYG+A+ R W+ + Y + L V+ L+D +PPQ++D
Sbjct: 72 YQARATGYCLVDLPGYGYARCSMAERDKWAKLIEAYLSKTDQLRAVVALVDCRLPPQRLD 131
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
++ +WL IP+ V TK DK K R + K +++L + P PP I+ S T
Sbjct: 132 IELVDWLRARRIPMIMVLTKADK---CKQRDREARKKEWRELAQ---PAFPP-ILFSGKT 184
Query: 200 GLGRDELLLHMSQ 212
GLGR+ L +++
Sbjct: 185 GLGREALCRVLAE 197
>gi|169829417|ref|YP_001699575.1| GTP-binding protein [Lysinibacillus sphaericus C3-41]
gi|168993905|gb|ACA41445.1| Probable GTP-binding protein [Lysinibacillus sphaericus C3-41]
Length = 186
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 5/182 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
V S+ R P+D PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ +N + +
Sbjct: 1 MVISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKI 60
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ + VD+PGYG+AK R W + YF R+ L V+ ++D PP D
Sbjct: 61 EEQLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIVDLRHPPTADDRMMY 120
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
++L NIP + TK DK+ K + + +K ++ + + P I+ SS +GLG
Sbjct: 121 DFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEMEKND-----PLIVFSSESGLGF 175
Query: 204 DE 205
+E
Sbjct: 176 EE 177
>gi|195978195|ref|YP_002123439.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195974900|gb|ACG62426.1| probable GTP-binding protein EngB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 200
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F V+
Sbjct: 18 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 77
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
+VD+PGYG+AK R W + Y R++L V+ L+D P + D+ +L
Sbjct: 78 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEFL 137
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ + + + +K N+ +I+ SSV +G DE
Sbjct: 138 KYYEIPVIIVATKADKVLRGRWNKHESMVKK-----SLNFDRTDAFIIFSSVERIGIDE 191
>gi|392546880|ref|ZP_10294017.1| GTP-binding protein YsxC [Pseudoalteromonas rubra ATCC 29570]
Length = 209
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+FV S+ P D E A GRSN GKSS +NAL +K LA TSK PG+TQLIN F
Sbjct: 6 AQFVTSAPDISRLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTF 64
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+++ ++DLPGYGFAK P + W Y R+SL G+++L+D P + +D+D
Sbjct: 65 SLDEDKRLIDLPGYGFAKVPLEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHPLKDLDMD 124
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI---KSFQQLIRENYPHHPPWIMTSSV 198
NW ++IP+ + TK DK+K +G+R E + K+ +L + H SS+
Sbjct: 125 LINWAAGSDIPVLALLTKADKLK--QGKRKAEVLQVRKALAELNADITVH-----AFSSL 177
Query: 199 TGLGRDEL 206
GLG EL
Sbjct: 178 KGLGLKEL 185
>gi|296331634|ref|ZP_06874103.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675407|ref|YP_003867079.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151229|gb|EFG92109.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413651|gb|ADM38770.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 195
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDALHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVQMYEFLKYYGIPVIVIATKAD--KIPKGKW-DKHAKVVRQTL--NIDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|408411358|ref|ZP_11182521.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus sp.
66c]
gi|407874482|emb|CCK84327.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus sp.
66c]
Length = 197
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 89/146 (60%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ +F S+ +A P+D E A+ GRSNVGKSSLIN ++++K LA TS PGKTQ +
Sbjct: 3 IKQSDFAVSAVKASQYPQDGLDEIALAGRSNVGKSSLINTILQRKNLARTSSSPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN +Y+VD+PGYG+AK R ++ + Y R L G++LLID P
Sbjct: 63 NFYRVNDDFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEPTAD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ ++ N+P+ V TK DK+K
Sbjct: 123 DIAMYDYAQYLNLPILVVATKMDKIK 148
>gi|148653688|ref|YP_001280781.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1]
gi|148572772|gb|ABQ94831.1| cell division checkpoint GTPase YihA [Psychrobacter sp. PRwf-1]
Length = 232
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
Query: 2 ILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVR 61
I P S + + ++++ EF+ S+ K CP D E A GRSN GKSS IN L
Sbjct: 16 IAPESASDLSHLSPRKRLEQTEFLMSAPTFKLCPPDTGYEVAFAGRSNAGKSSAINVLTN 75
Query: 62 KKELALTSKKPGKTQLINHFLV-NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRE 120
+++LA +SK PG+TQ+IN F + N+ +VDLPGYG+A P+ ++ W + + Y ++RE
Sbjct: 76 QRQLARSSKTPGRTQMINFFTIGNEEARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRE 135
Query: 121 SLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI 175
SL G++LL+D+ P + D W +P+ + TK DK K P +NI
Sbjct: 136 SLAGLVLLMDSRHPLKFFDEQMLRWAKDGELPVHVLLTKADKFKYG----PAKNI 186
>gi|307705962|ref|ZP_07642787.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307620472|gb|EFN99583.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 195
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+
Sbjct: 5 IHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLL 64
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F ++ VD+PGYG+A+ R W + Y RE+L V+ L+D P
Sbjct: 65 NFFNIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSAD 124
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP+ V TK DK+ K + + IK + N+ +I+ SSV
Sbjct: 125 DVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSV 179
Query: 199 TGLGRDE 205
+ G DE
Sbjct: 180 SKAGMDE 186
>gi|92115232|ref|YP_575160.1| ribosome biogenesis GTP-binding protein YsxC [Chromohalobacter
salexigens DSM 3043]
gi|119369183|sp|Q1QSU7.1|ENGB_CHRSD RecName: Full=Probable GTP-binding protein EngB
gi|91798322|gb|ABE60461.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens
DSM 3043]
Length = 207
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ CP D E A GRSN GKSS IN L ++K LA TSK PG+TQLIN
Sbjct: 10 QTARFLTSAPGLAQCPPDQGAEVAFAGRSNAGKSSAINTLTQQKALARTSKTPGRTQLIN 69
Query: 80 HFLV--NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
F + ++++ +VDLPGYGFAK PD +++W Y R +L G++L++D P +
Sbjct: 70 FFTLANDETYRLVDLPGYGFAKVPDQVKLEWQRHLSEYLYERATLRGLMLVMDVRHPLSE 129
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D W +P+ + TK DK+K
Sbjct: 130 FDQMMLGWADEKAMPVHILLTKADKLK 156
>gi|296112713|ref|YP_003626651.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
gi|416155879|ref|ZP_11604172.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
101P30B1]
gi|416220221|ref|ZP_11625313.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
103P14B1]
gi|416228461|ref|ZP_11627615.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
46P47B1]
gi|416235793|ref|ZP_11630336.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
12P80B1]
gi|416241966|ref|ZP_11633100.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7]
gi|416247274|ref|ZP_11635580.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8]
gi|416250069|ref|ZP_11637078.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72]
gi|416254154|ref|ZP_11638588.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E]
gi|421779529|ref|ZP_16216021.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
gi|295920407|gb|ADG60758.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BBH18]
gi|326563796|gb|EGE14047.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
46P47B1]
gi|326563958|gb|EGE14208.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
12P80B1]
gi|326566809|gb|EGE16948.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
103P14B1]
gi|326569867|gb|EGE19917.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8]
gi|326571527|gb|EGE21542.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7]
gi|326575192|gb|EGE25120.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72]
gi|326576722|gb|EGE26629.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis
101P30B1]
gi|326577603|gb|EGE27480.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E]
gi|407813239|gb|EKF84021.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4]
Length = 224
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QI + +F+ S+ K CP+D E A GRSN GKSS IN + +K+LA +SK PG+TQ+
Sbjct: 9 QIHQTKFLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQM 68
Query: 78 INHFLV-NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
IN F+V ++ IVDLPGYG+A P+ ++ W + Y ++R+SL G++L+ D P +
Sbjct: 69 INFFMVGDEQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHPLK 128
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D +W +P+ + TK DK+K +G + + + +QL + P + S
Sbjct: 129 YFDEQMLHWAKDGKLPVHVLLTKSDKLK--RGAQKSALLATKKQLEVLDLPFSIQ--LFS 184
Query: 197 SVTGLGRDELLL 208
++ G DEL L
Sbjct: 185 ALKKEGMDELAL 196
>gi|256850971|ref|ZP_05556360.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 27-2-CHN]
gi|260661185|ref|ZP_05862099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 115-3-CHN]
gi|256616033|gb|EEU21221.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 27-2-CHN]
gi|260548122|gb|EEX24098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii 115-3-CHN]
Length = 196
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 99/168 (58%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E+ S+ R P+D PE A+ GRSNVGKSSLIN+ + +K LA TS +PGKTQ
Sbjct: 2 KIISSEYSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN S+Y+VD+PGYG+A+ R + + Y R +L G++++IDA P
Sbjct: 62 LNFYKVNNSFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ N+ ++P+ V TK DK+K ++ + N++ L +N
Sbjct: 122 DDIAMYNYALLLDLPILVVATKMDKIKKSQYNKVFSNLRKHLDLDHDN 169
>gi|297205853|ref|ZP_06923248.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii JV-V16]
gi|297148979|gb|EFH29277.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus
jensenii JV-V16]
Length = 196
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 99/168 (58%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I E+ S+ R P+D PE A+ GRSNVGKSSLIN+ + +K LA TS +PGKTQ
Sbjct: 2 KIISSEYSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + VN S+Y+VD+PGYG+A+ R + + Y R +L G++++IDA P
Sbjct: 62 LNFYKVNNSFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTV 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ N+ ++P+ V TK DK+K ++ + N++ L +N
Sbjct: 122 DDIAMYNYALLLDLPILVVATKMDKIKKSQYNKVFSNLRKHLDLDHDN 169
>gi|325290591|ref|YP_004266772.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271]
gi|324965992|gb|ADY56771.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271]
Length = 217
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++VE++ S+ + + P E A+ GRSNVGKSSLIN + +K +A + PGKTQ I
Sbjct: 3 IRKVEYIISAVKPEQYPPGVSMELAVAGRSNVGKSSLINKFLNRKNMARVGQTPGKTQAI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F +N WY+VDLPGYG+AK + W + YF R +L+GV+ L+D P +
Sbjct: 63 NFFHINDEWYLVDLPGYGYAKVSLEVKARWGRMMQTYFQKRGNLLGVIQLVDIRHKPTED 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D L IP+ V TK DK+ ++ R+ + + L E++ P+ S+V
Sbjct: 123 DKTMVKMLRDRGIPMLLVATKADKL--SRSRQIVQLKIIAETLGVEDWKQIIPF---SAV 177
Query: 199 TGLGRDELLLHMSQL 213
G G EL + QL
Sbjct: 178 DGTGNRELHEEVDQL 192
>gi|398306533|ref|ZP_10510119.1| GTP-binding protein YsxC [Bacillus vallismortis DV1-F-3]
Length = 195
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y +RE L V+ ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKTEREAWGRMIETYITSREELKAVVQIVDLRHAPSA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD--KIPKGKW-DKHAKVVRQTL--NIDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|422848751|ref|ZP_16895427.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK115]
gi|422851692|ref|ZP_16898362.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK150]
gi|422854192|ref|ZP_16900856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK160]
gi|325689772|gb|EGD31776.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK115]
gi|325694580|gb|EGD36489.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK150]
gi|325696428|gb|EGD38318.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK160]
Length = 195
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDRNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|349686494|ref|ZP_08897636.1| GTP-binding protein YsxC [Gluconacetobacter oboediens 174Bp2]
Length = 222
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 3/195 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E FV + + P PE A GRSNVGKSSLINAL ++ LA S +PG+T+ +N
Sbjct: 29 EFNFVFGAQKLGQLPDPVLPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNF 88
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + +VD+PGYGFAKA + DW Y R +L V+LL+D+ V + D
Sbjct: 89 FELADRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKATDQ 148
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L R + V TKCD V K + ++ ++ + +P + TSS TG
Sbjct: 149 EIMKMLDRAAVTFQVVLTKCD---VPKPAVLEAKLREVTGIVATHAAAYPHVLATSSETG 205
Query: 201 LGRDELLLHMSQLRN 215
+G ++L +++L N
Sbjct: 206 MGIEDLRAELARLAN 220
>gi|350266992|ref|YP_004878299.1| GTP-binding protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|386759377|ref|YP_006232593.1| GTP-binding protein [Bacillus sp. JS]
gi|349599879|gb|AEP87667.1| GTP-binding protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|384932659|gb|AFI29337.1| GTP-binding protein [Bacillus sp. JS]
Length = 195
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVQMYEFLKYYGIPVIIIATKAD--KIPKGKW-DKHAKVVRQTL--NIDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|422876520|ref|ZP_16922990.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1056]
gi|332361328|gb|EGJ39132.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1056]
Length = 195
Score = 122 bits (307), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDRNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|291520784|emb|CBK79077.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus
catus GD/7]
Length = 204
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P++ PE A G+SNVGKSSLIN L+ +K A S++PGKTQ I
Sbjct: 3 IKNVNLETVCGITSTLPENQHPEVAFSGKSNVGKSSLINGLMNRKAYARVSQQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ VN YIVDLPGYGFA + W + Y L V LL+D P
Sbjct: 63 NYYNVNDEIYIVDLPGYGFANVSQAVKAKWGKMIENYLRKSRQLRMVFLLVDIRHEPSAN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMTS 196
D +W+ N + TK DK+K ++ ++ +LIRE N P + S
Sbjct: 123 DKHMYSWIIENGFYPAIIATKLDKIKRSQ-------VQKQLKLIREGLNVAEGTPIVPYS 175
Query: 197 SVTGLGRDEL 206
+VT GRDE+
Sbjct: 176 AVTKQGRDEI 185
>gi|225857194|ref|YP_002738705.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae P1031]
gi|444409709|ref|ZP_21206294.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0076]
gi|444412710|ref|ZP_21209029.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0153]
gi|444415162|ref|ZP_21211406.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0199]
gi|444422319|ref|ZP_21217978.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0446]
gi|254783215|sp|C1CLR7.1|ENGB_STRZP RecName: Full=Probable GTP-binding protein EngB
gi|225725684|gb|ACO21536.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444273949|gb|ELU79604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0153]
gi|444278954|gb|ELU84373.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0076]
gi|444280591|gb|ELU85953.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0199]
gi|444288369|gb|ELU93265.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0446]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+
Sbjct: 5 IHNAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLL 64
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F ++ VD+PGYG+A+ R W + Y RE+L V+ L+D P
Sbjct: 65 NFFNIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSAD 124
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L IP+ V TK DK+ K + + IK + N+ +I+ SSV
Sbjct: 125 DVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSV 179
Query: 199 TGLGRDE 205
+ G DE
Sbjct: 180 SKAGMDE 186
>gi|422823655|ref|ZP_16871843.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK405]
gi|422826273|ref|ZP_16874452.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK678]
gi|422855589|ref|ZP_16902247.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1]
gi|422865564|ref|ZP_16912189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1058]
gi|324992982|gb|EGC24902.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK405]
gi|324995709|gb|EGC27621.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK678]
gi|327462278|gb|EGF08605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1]
gi|327489631|gb|EGF21423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1058]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDRNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|389843642|ref|YP_006345722.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesotoga prima
MesG1.Ag.4.2]
gi|387858388|gb|AFK06479.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Mesotoga prima
MesG1.Ag.4.2]
Length = 190
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K E V++ + P R E A GRSNVGKSSL+N+L +K LA TS PGKT+ I
Sbjct: 3 VKSTELVRTVFSKGEYPPPLRREIAFAGRSNVGKSSLLNSLFGRK-LAKTSSTPGKTRSI 61
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN+ Y VDLPGYG+AKA R W YF +RE L V++L+D P Q
Sbjct: 62 NFYGVNREIYFVDLPGYGYAKASMSEREKWKKLIIDYFESREELSLVVVLVDIRHPLQPA 121
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ W+ IP V TK DK+ + +++IK +L + +PP + S+V
Sbjct: 122 DIQMLEWVTYYTIPFILVLTKADKLSRNQQIIAEKSIK--DEL--ASLGVYPPVFVVSAV 177
Query: 199 TGLGRDELLLHM 210
G +ELL+ +
Sbjct: 178 KKQGIEELLIAL 189
>gi|422846588|ref|ZP_16893271.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK72]
gi|325687396|gb|EGD29417.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK72]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVVLVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|313665181|ref|YP_004047052.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii
PG50]
gi|392389005|ref|YP_005907414.1| GTP-binding protein engB [Mycoplasma leachii 99/014/6]
gi|312949369|gb|ADR23965.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii
PG50]
gi|339276650|emb|CBV67229.1| Probable GTP-binding protein engB [Mycoplasma leachii 99/014/6]
Length = 196
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSAANKNNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR++L GV LL+D P
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE--NYPHHPPWIMT 195
D+ +L NIP+ + TK DK+K +E IK+ +++I+E N+ +I
Sbjct: 122 DDVMMYQFLKHYNIPVVIIGTKLDKLK------RNEYIKN-EKMIKETINFYQEDDFIKI 174
Query: 196 SSVT 199
S++
Sbjct: 175 SNLN 178
>gi|339640244|ref|ZP_08661688.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 056 str. F0418]
gi|339453513|gb|EGP66128.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 056 str. F0418]
Length = 198
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSV
Sbjct: 128 MYEFLKYYEIPVILVATKADKIPRGKWNKHESAIKK-----KLNFDPNDDFILFSSVDKT 182
Query: 202 G 202
G
Sbjct: 183 G 183
>gi|241896577|ref|ZP_04783873.1| GTPase [Weissella paramesenteroides ATCC 33313]
gi|241870169|gb|EER73920.1| GTPase [Weissella paramesenteroides ATCC 33313]
Length = 208
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +VE V S+ R P D PE A +GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHQVEMVMSAVRESQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R D++ Y R L G++ L+DA P +
Sbjct: 62 LNFYKVENQVFFVDVPGYGYAKVSKKAREDFAIMIGEYLRKRVPLKGIVQLVDARHLPSR 121
Query: 138 IDLDCANWLGRNNI--PLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE 184
D++ NWL ++I P+ V TK DK+ K + + +IK Q E
Sbjct: 122 EDIEMYNWLISDDIGLPVLVVATKADKISRGKWNKVEADIKRSLQFNEE 170
>gi|422882215|ref|ZP_16928671.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK355]
gi|332360756|gb|EGJ38564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK355]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|392531121|ref|ZP_10278258.1| GTP-binding protein YsxC [Carnobacterium maltaromaticum ATCC 35586]
gi|414084148|ref|YP_006992856.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium
maltaromaticum LMA28]
gi|412997732|emb|CCO11541.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium
maltaromaticum LMA28]
Length = 195
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ + + V S+ P PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ +
Sbjct: 3 VHKADIVISAVAPAQYPSTGLPEIALAGRSNVGKSSFINRMINRKGLARTSSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N +++ +Y VD+PGYG+AK R W + Y R++L VL ++D P K
Sbjct: 63 NFYIIQDQFYFVDVPGYGYAKVSKTERAKWGQMLETYLTKRDTLKAVLSVVDLRHAPSKE 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L ++P+ V TK DK+ +K +++IK + + + + ++M SS
Sbjct: 123 DVQMYQFLKYYDLPVIVVATKADKIPRSKW---NKHIKIVKDTL--EFDKNDEFVMFSSE 177
Query: 199 TGLGRDE 205
TG G+DE
Sbjct: 178 TGEGKDE 184
>gi|227529062|ref|ZP_03959111.1| GTPase [Lactobacillus vaginalis ATCC 49540]
gi|227351074|gb|EEJ41365.1| GTPase [Lactobacillus vaginalis ATCC 49540]
Length = 202
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V+ S+ +K P + PE A++GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 6 QVNNVDLTISAVESKQYPATNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y R+ L GV+ L+D P
Sbjct: 66 LNFYNVEDELYFVDVPGYGYAKVSKKERERFGKMIEEYLTTRQQLRGVIQLVDGRHKPTA 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK-VAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D+ WL +IP V TK DK+K A+ R ++ IK+ + P ++ S
Sbjct: 126 DDVSMYQWLAYYDIPTLIVGTKIDKVKPNARNRVKNDIIKTL------DLTPKTPLVLFS 179
Query: 197 SVTGLGRDEL 206
+V G+D++
Sbjct: 180 AVKKQGKDQV 189
>gi|257784166|ref|YP_003179383.1| small GTP-binding protein [Atopobium parvulum DSM 20469]
gi|257472673|gb|ACV50792.1| small GTP-binding protein [Atopobium parvulum DSM 20469]
Length = 194
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
++ S G P + PE A +GRSNVGKSSL+N L+ +K+LA S PGKT IN F
Sbjct: 8 AQYEASYGTISQLPSPETPEVAFVGRSNVGKSSLLNKLIGRKQLARVSSVPGKTANINFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
V+ + VDLPGYGFA+ + W+ GYF S V+ L+D QK+DL
Sbjct: 68 DVDGVKF-VDLPGYGFARVSRQEKQRWADLIGGYFEQERSFNLVISLVDIRHEAQKLDLQ 126
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW-IMTSSVTG 200
N+L +P FTK D K+A+G++ +R+ + P I+TSS TG
Sbjct: 127 MINFLQEAELPFVVAFTKAD--KIARGKQNQAAAA-----LRKAFHITPEQTIITSSETG 179
Query: 201 LGRDEL 206
LG DEL
Sbjct: 180 LGIDEL 185
>gi|94501575|ref|ZP_01308092.1| GTP-binding protein [Bermanella marisrubri]
gi|94426258|gb|EAT11249.1| GTP-binding protein [Oceanobacter sp. RED65]
Length = 200
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ +F+ S+ + CP+D+ E A GRSN GKSS +N L ++ +LA TSK PG+TQLIN
Sbjct: 6 QKAQFLISAPSIRQCPEDNGAEVAFAGRSNAGKSSALNTLAQQNKLARTSKTPGRTQLIN 65
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F + + +VDLPGYGFAK P+ + +W Y R+SL ++L++D P + D
Sbjct: 66 FFEIEEGLRLVDLPGYGFAKVPERMKREWQKNMSEYLEQRKSLKAMVLVMDIRHPLSEFD 125
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMK 164
L W N+P + TK DK+K
Sbjct: 126 LMMCQWALDCNMPTHILLTKADKLK 150
>gi|16079871|ref|NP_390697.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
subsp. subtilis str. 168]
gi|221310759|ref|ZP_03592606.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. 168]
gi|221315084|ref|ZP_03596889.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320003|ref|ZP_03601297.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324285|ref|ZP_03605579.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SMY]
gi|321312351|ref|YP_004204638.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|384176403|ref|YP_005557788.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|402776976|ref|YP_006630920.1| ribosome 50S subunit assembly GTPase [Bacillus subtilis QB928]
gi|418031998|ref|ZP_12670481.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280277|ref|YP_005562012.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|430755953|ref|YP_007208676.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443632146|ref|ZP_21116326.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449095262|ref|YP_007427753.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452915110|ref|ZP_21963736.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
gi|586754|sp|P38424.1|ENGB_BACSU RecName: Full=Probable GTP-binding protein EngB
gi|49259156|pdb|1SUL|A Chain A, Crystal Structure Of The Apo-Ysxc
gi|49259157|pdb|1SUL|B Chain B, Crystal Structure Of The Apo-Ysxc
gi|49259162|pdb|1SVI|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ysxc
Complexed With Gdp
gi|49259165|pdb|1SVW|A Chain A, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|49259166|pdb|1SVW|B Chain B, Crystal Structure Of Ysxc Complexed With Gmppnp
gi|496558|emb|CAA53985.1| unnamed protein product [Bacillus subtilis subsp. subtilis str.
168]
gi|1770079|emb|CAA99541.1| hypothetical protein [Bacillus subtilis]
gi|2635284|emb|CAB14779.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485234|dbj|BAI86309.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195]
gi|320018625|gb|ADV93611.1| GTP-binding protein YsxC [Bacillus subtilis BSn5]
gi|349595627|gb|AEP91814.1| GTP-binding protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470861|gb|EHA30982.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SC-8]
gi|402482156|gb|AFQ58665.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis
QB928]
gi|407960015|dbj|BAM53255.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7613]
gi|407965658|dbj|BAM58897.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
BEST7003]
gi|430020473|gb|AGA21079.1| GTP-binding protein EngB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|443348261|gb|ELS62318.1| GTPase EngB [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|449029177|gb|AGE64416.1| ribosome biogenesis GTP-binding protein [Bacillus subtilis XF-1]
gi|452115458|gb|EME05854.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis
MB73/2]
Length = 195
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ + TK D K+ KG+ D++ K +Q + N I+ SS
Sbjct: 122 DDVQMYEFLKYYGIPVIVIATKAD--KIPKGKW-DKHAKVVRQTL--NIDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|194335477|ref|YP_002017271.1| ribosome biogenesis GTP-binding protein YsxC [Pelodictyon
phaeoclathratiforme BU-1]
gi|238693375|sp|B4SC74.1|ENGB_PELPB RecName: Full=Probable GTP-binding protein EngB
gi|194307954|gb|ACF42654.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme
BU-1]
Length = 193
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 99/183 (54%), Gaps = 17/183 (9%)
Query: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPG 94
P+D PE GRSNVGKS+L+N+L K LA TS PGKT+LIN+FL+N+ Y VDLPG
Sbjct: 19 PEDSFPEIVFAGRSNVGKSTLLNSLTGVKGLAKTSATPGKTRLINYFLINRDVYFVDLPG 78
Query: 95 YGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLT 154
YG+A + W + Y + R S+ V+LL+D+ P + D ++L ++ P
Sbjct: 79 YGYAAVGHAEKALWGNLLSSYIIQRRSISLVVLLLDSRHPAMQSDRAMISFLESHDRPYG 138
Query: 155 FVFTKCDKM----KVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-SSVTGLGRDELLLH 209
V TK DK+ KV GR I E+ +I+ SS +G G+ ELL H
Sbjct: 139 IVLTKYDKLTQKEKVQTGR------------IMESCAAKAKFIVNYSSFSGKGKSELLAH 186
Query: 210 MSQ 212
Q
Sbjct: 187 FDQ 189
>gi|257865955|ref|ZP_05645608.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257872288|ref|ZP_05651941.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257875582|ref|ZP_05655235.1| GTP-binding protein [Enterococcus casseliflavus EC20]
gi|257799889|gb|EEV28941.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257806452|gb|EEV35274.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257809748|gb|EEV38568.1| GTP-binding protein [Enterococcus casseliflavus EC20]
Length = 194
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHDAEIVISAVSPAQYPATPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y RE L V+ L+D P +
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ V TK DK+ K + + IK ++ +I+ SS
Sbjct: 122 EDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESMIKKAL-----SFDPADTFILFSS 176
Query: 198 VTGLGRDE 205
+T G++E
Sbjct: 177 ITKQGKEE 184
>gi|422878929|ref|ZP_16925395.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1059]
gi|422928775|ref|ZP_16961717.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 29667]
gi|422931749|ref|ZP_16964680.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK340]
gi|332366631|gb|EGJ44374.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1059]
gi|339616043|gb|EGQ20701.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 29667]
gi|339619481|gb|EGQ24060.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK340]
Length = 195
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|256384099|gb|ACU78669.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. capri str. GM12]
gi|256384931|gb|ACU79500.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides
subsp. capri str. GM12]
gi|296455974|gb|ADH22209.1| ribosome biogenesis GTP-binding protein YsxC [synthetic Mycoplasma
mycoides JCVI-syn1.0]
Length = 196
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR++L GV LL+D P
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ +L NIP+ + TK DK+K ++ + ++ IK +E+
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQED 169
>gi|401683083|ref|ZP_10814972.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
AS14]
gi|400183765|gb|EJO18016.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
AS14]
Length = 195
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|125717924|ref|YP_001035057.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK36]
gi|422858546|ref|ZP_16905196.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1057]
gi|422860217|ref|ZP_16906861.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK330]
gi|166226980|sp|A3CMV2.1|ENGB_STRSV RecName: Full=Probable GTP-binding protein EngB
gi|125497841|gb|ABN44507.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
gi|327460432|gb|EGF06769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK1057]
gi|327470115|gb|EGF15579.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK330]
Length = 195
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +IP+ V TK DK+ K + + IK + ++ + +I+ SSVT
Sbjct: 128 MYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|50914055|ref|YP_060027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS10394]
gi|94994180|ref|YP_602278.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS10750]
gi|139473949|ref|YP_001128665.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes str. Manfredo]
gi|383479870|ref|YP_005388764.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS15252]
gi|383493785|ref|YP_005411461.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS1882]
gi|73919335|sp|Q5XCL9.1|ENGB_STRP6 RecName: Full=Probable GTP-binding protein EngB
gi|119369272|sp|Q1J740.1|ENGB_STRPF RecName: Full=Probable GTP-binding protein EngB
gi|166225987|sp|A2RF16.1|ENGB_STRPG RecName: Full=Probable GTP-binding protein EngB
gi|50903129|gb|AAT86844.1| YihA [Streptococcus pyogenes MGAS10394]
gi|94547688|gb|ABF37734.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10750]
gi|134272196|emb|CAM30442.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|378927860|gb|AFC66066.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS15252]
gi|378929513|gb|AFC67930.1| GTP-binding protein EngB [Streptococcus pyogenes MGAS1882]
Length = 199
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDNK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPRGKWNKHESVVKKAL-----NFDKSDTFIVFSSVERIGIDD 190
>gi|257869244|ref|ZP_05648897.1| GTP-binding protein [Enterococcus gallinarum EG2]
gi|357050130|ref|ZP_09111341.1| GTP-binding protein engB [Enterococcus saccharolyticus 30_1]
gi|257803408|gb|EEV32230.1| GTP-binding protein [Enterococcus gallinarum EG2]
gi|355382179|gb|EHG29284.1| GTP-binding protein engB [Enterococcus saccharolyticus 30_1]
Length = 195
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ P PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQ
Sbjct: 2 KVHDAEIVISAVSPAQYPDTHLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +L+ + + VD+PGYG+AK R W + Y R+ L V+ L+D P +
Sbjct: 62 LNFYLIENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLAERQQLRAVVSLVDLRHAPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ V TK DK+ K + + IK + + +I+ SS
Sbjct: 122 EDIQMYQFLKYYEIPVIVVATKADKIPRGKWNKHESVIKKALE-----FDPADTFILFSS 176
Query: 198 VTGLGRDE 205
+T G++E
Sbjct: 177 ITKQGKEE 184
>gi|406837388|ref|ZP_11096982.1| GTP-binding protein [Lactobacillus vini DSM 20605]
Length = 194
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 41 EFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKA 100
E A +GRSNVGKSSL+N+L+ +K+LA S +PGKTQ +N +L+++ + VD+PGYG+AK
Sbjct: 25 EIAFVGRSNVGKSSLVNSLLGRKKLARISSQPGKTQTLNFYLIDQKFRFVDVPGYGYAKV 84
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
R DW + Y R++L GV+ LID P ++D ++L +PL V TK
Sbjct: 85 SQQKRQDWGKMIETYLTQRDNLRGVISLIDGRHAPTQLDQQMVDYLKYYQLPLLIVATKT 144
Query: 161 DKMKVAKGRR 170
D K+AKGRR
Sbjct: 145 D--KIAKGRR 152
>gi|270292404|ref|ZP_06198615.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M143]
gi|270278383|gb|EFA24229.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M143]
Length = 197
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 10 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 69
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 70 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 129
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 130 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 184
Query: 202 GRDE 205
G D+
Sbjct: 185 GMDQ 188
>gi|15674911|ref|NP_269085.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes SF370]
gi|71910505|ref|YP_282055.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS5005]
gi|306827517|ref|ZP_07460800.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes ATCC 10782]
gi|386362545|ref|YP_006071876.1| putative GTP-binding protein engB [Streptococcus pyogenes Alab49]
gi|410680369|ref|YP_006932771.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes A20]
gi|421892638|ref|ZP_16323264.1| GTP-binding protein EngB [Streptococcus pyogenes NS88.2]
gi|24418393|sp|Q9A088.1|ENGB_STRP1 RecName: Full=Probable GTP-binding protein EngB
gi|13622052|gb|AAK33806.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
M1 GAS]
gi|71853287|gb|AAZ51310.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|304430315|gb|EFM33341.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes ATCC 10782]
gi|350276954|gb|AEQ24322.1| putative GTP-binding protein engB [Streptococcus pyogenes Alab49]
gi|379981613|emb|CCG26986.1| GTP-binding protein EngB [Streptococcus pyogenes NS88.2]
gi|409692958|gb|AFV37818.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes A20]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPRGKWNKHESVVKKAL-----NFDKSDTFIVFSSVERIGIDD 190
>gi|332523732|ref|ZP_08399984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
porcinus str. Jelinkova 176]
gi|332314996|gb|EGJ27981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
porcinus str. Jelinkova 176]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDNIPEIALAGRSNVGKSSFINTILGRKNLARTSAKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +NRE+L V+ L+D P D+ +L
Sbjct: 77 IRFVDVPGYGYAKVSKTERARWGKMIEEYLVNRENLRVVVSLVDLRHEPSGEDVQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +K + N+ + +I+ SSV LG D+
Sbjct: 137 KYYEIPVIVVATKADKIPRGKWNKHEAMVKK-----KLNFDSNDQFIIFSSVDRLGIDQ 190
>gi|339484155|ref|YP_004695941.1| GTP-binding protein engB [Nitrosomonas sp. Is79A3]
gi|338806300|gb|AEJ02542.1| GTP-binding protein engB [Nitrosomonas sp. Is79A3]
Length = 198
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S+ V F S +D P E A GRSN GKSS IN L + LA SK PG+TQ
Sbjct: 2 SRFNNVTFYTSVNDIRDLPVHAGIEIAFAGRSNAGKSSAINTLTNRSRLAFVSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN+F +N ++VDLPGYG+AK PD R W + Y RE L G++L++D P +
Sbjct: 62 LINYFKLNTDQFLVDLPGYGYAKVPDSIRQHWQNLLSNYLQTREPLKGLVLIMDIRHPLK 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH 188
+D+ +W + + TK DK+ ++ + +K ++ YP
Sbjct: 122 PLDIKMLDWFAPTGKAIHILLTKADKL---SAQQANITLKDVALYLKSAYPQ 170
>gi|357383145|ref|YP_004897869.1| GTP-binding protein EngB [Pelagibacterium halotolerans B2]
gi|351591782|gb|AEQ50119.1| GTP-binding protein EngB [Pelagibacterium halotolerans B2]
Length = 209
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+K R D P DD E A GRSNVGKSSLINALV + LA TS PG+TQ +N F
Sbjct: 18 FLKGCVRVSDLPADDVVEIAFAGRSNVGKSSLINALVGQSALARTSNTPGRTQELNLFAP 77
Query: 84 NKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+VD+PGYGFAKAP W+ + R +L V +L+DA P+ D
Sbjct: 78 EAGGIRLVDMPGYGFAKAPKPAVEKWNKLIHQFLRGRPNLRRVYVLVDARHGPKPNDATV 137
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
N L R + V TK DK+ + D + + + I + HP I+TSS GLG
Sbjct: 138 MNELDRAAVSYQVVLTKADKL---SEKDLDGVVAATAKFIAKRPAAHPEIIVTSSEKGLG 194
Query: 203 RDELLLHMSQLRN 215
D L ++ LR
Sbjct: 195 IDTLRREVAGLRE 207
>gi|406670721|ref|ZP_11077966.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia hominis
CCUG 36813]
gi|405582237|gb|EKB56243.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia hominis
CCUG 36813]
Length = 197
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 89/147 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
QIKE FV S+ + P+DD E A+ GRSNVGKSS IN +V++K LA TS +PGKTQ
Sbjct: 2 QIKEANFVISAVKPDQYPQDDLLEVALAGRSNVGKSSFINRMVQRKALARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +NKS+ VD+PGYG+A+ +R +S Y R ++ + LL+D P +
Sbjct: 62 LNFYEINKSFRFVDVPGYGYARVSKQSRHAFSKLNASYLSQRPNIALLFLLMDIRHEPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
+D + + +IP + TK DK+K
Sbjct: 122 LDKEMFAFAESLDIPFAVILTKLDKIK 148
>gi|335996459|ref|ZP_08562376.1| GTPase [Lactobacillus ruminis SPM0211]
gi|335351529|gb|EGM53020.1| GTPase [Lactobacillus ruminis SPM0211]
Length = 202
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++ VE S+ P + PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ
Sbjct: 6 KVQNVELTISAVSPAQYPNEGFPEIALSGRSNVGKSSLINTLINRKGLARTSSQPGKTQT 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W + YF NR L GV+ L+D P +
Sbjct: 66 LNFYNIESELYFVDVPGYGYAKVSKKDREKWGQMIERYFSNRPVLRGVISLVDGRHEPTE 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D ++L ++P+ TK DK+ K R + I+ L ++ ++ SS
Sbjct: 126 LDCQMIDFLHYYDLPILVCATKMDKIPRGKWNRTESQIRKKLALNPQD-----EIVLFSS 180
Query: 198 VTGLGRDEL 206
VT G++E+
Sbjct: 181 VTKAGKEEV 189
>gi|419707484|ref|ZP_14234968.1| Putative GTP-binding protein engB [Streptococcus salivarius PS4]
gi|383282830|gb|EIC80810.1| Putative GTP-binding protein engB [Streptococcus salivarius PS4]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N +
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ VD+PGYG+A+ R W + Y + R++L V+ L+D P + D+
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSVT G
Sbjct: 133 YEFLKYYEIPVIIVATKADKIPRGKWNKHESVIKK-----KLNFDKNDHFIVFSSVTRDG 187
Query: 203 RDE 205
DE
Sbjct: 188 YDE 190
>gi|262282293|ref|ZP_06060061.1| GTPase EngB [Streptococcus sp. 2_1_36FAA]
gi|262261584|gb|EEY80282.1| GTPase EngB [Streptococcus sp. 2_1_36FAA]
Length = 197
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDNKLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV
Sbjct: 128 MYEFLKYYEIPVILVATKADKIPRGKWNKHESAIKK-----KLNFDPADTFILFSSVDKT 182
Query: 202 GRD 204
G D
Sbjct: 183 GID 185
>gi|392553089|ref|ZP_10300226.1| GTP-binding protein YsxC [Pseudoalteromonas spongiae UST010723-006]
Length = 215
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q + F+ S+ P D E A GRSN GKSS +N L +K LA TSK PG+TQL
Sbjct: 7 QYSKASFITSAPDITKLPADSGVEVAFAGRSNAGKSSALNTLTDQK-LARTSKTPGRTQL 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F + + I+DLPGYGFAK P + W Y RESL G+++L+D P ++
Sbjct: 66 INTFSLGEDMRIIDLPGYGFAKVPLEMKKKWQKSLGEYLQKRESLKGIVVLMDIRHPLKE 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL--IRENYPHHPPWIMT 195
+D+D NW +++ + + TK DK+K +G+R E +K ++L + + H
Sbjct: 126 LDMDLINWAVESDLEILALLTKADKLK--QGKRKSEVLKVRRELKELSDKITVHA----F 179
Query: 196 SSVTGLGRDEL 206
SS+ G+G EL
Sbjct: 180 SSLKGIGLPEL 190
>gi|21910141|ref|NP_664409.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS315]
gi|28896160|ref|NP_802510.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes SSI-1]
gi|342162549|sp|P0DA92.1|ENGB_STRP3 RecName: Full=Probable GTP-binding protein EngB
gi|342162550|sp|P0DA93.1|ENGB_STRPQ RecName: Full=Probable GTP-binding protein EngB
gi|21904334|gb|AAM79212.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811410|dbj|BAC64343.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes
SSI-1]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPHGKWNKHESVVKKAL-----NFDKSDTFIVFSSVERIGIDD 190
>gi|365922026|ref|ZP_09446267.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
valvarum F0432]
gi|364575033|gb|EHM52455.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium
valvarum F0432]
Length = 203
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
+S+ ++ F S+ R P D R E A GRSN GKSS +N L +K LA S+ PG+T
Sbjct: 2 NSRYQQAVFAFSANREAQFPPDSRVEIAFAGRSNAGKSSALNTLTNQKTLARVSRTPGRT 61
Query: 76 QLINHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
QLIN+F L + ++VDLPGYG+A+ P+ R W + Y L RE L GV+LL+D P
Sbjct: 62 QLINYFALPDAGCFLVDLPGYGYAEVPEQVRAHWQALLGRYLLQREVLRGVVLLMDIRHP 121
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
+++D+ +P + TK DK+ + K + L E H P+ +
Sbjct: 122 MKELDIRMLECCAERQLPAHVLLTKADKLSRSAAE------KQLRALRSELVNWHAPFSV 175
Query: 195 T--SSVTGLGRDELLLHM 210
SS+ LG EL+ +
Sbjct: 176 QLFSSLKRLGLPELVAQL 193
>gi|377809582|ref|YP_005004803.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
claussenii ATCC BAA-344]
gi|361056323|gb|AEV95127.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
claussenii ATCC BAA-344]
Length = 196
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE S+ + P PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVELQISAVAPEQYPTQGYPEIAMVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + + VD+PGYG+AK R W + + Y +R L GV+ LIDA P +
Sbjct: 62 LNFYRVEEKVFFVDVPGYGYAKVSQKEREKWGTMIETYLTSRNQLKGVISLIDARHQPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L NIP+ V TK DK+ K + + IK ++N M S+
Sbjct: 122 DDVSMYQYLNYYNIPILVVATKSDKIPRGKWNKQESLIKKTIGFDKKNSAFQ----MFSA 177
Query: 198 VTGLGRDEL 206
T G+D++
Sbjct: 178 QTKEGKDQV 186
>gi|3820578|gb|AAC69623.1| GTP-binding protein [Caulobacter vibrioides]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V F+ + R P D PE A GRSNVGKSSLIN LV +K LA S +PG+T+ IN F
Sbjct: 7 VSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTRQINFF 66
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
L+ + +VDLPGYGFA+ + + Y R +L V +LIDA +K+DL+
Sbjct: 67 LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHGLKKVDLE 126
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+ L + V TK DK+K A+ D+ + Q+ I + P + TSS GL
Sbjct: 127 ALDALDVAAVSYQIVLTKADKIKPAE---VDKVVAETQKAIAKRAAAFPRVLATSSEKGL 183
Query: 202 GRDELLLHMSQL 213
G EL + +L
Sbjct: 184 GMPELRAEIVRL 195
>gi|56808898|ref|ZP_00366607.1| COG0218: Predicted GTPase [Streptococcus pyogenes M49 591]
gi|94988379|ref|YP_596480.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS9429]
gi|94992261|ref|YP_600360.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes MGAS2096]
gi|209559239|ref|YP_002285711.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pyogenes NZ131]
gi|417857101|ref|ZP_12502160.1| GTP-binding protein YsxC [Streptococcus pyogenes HKU QMH11M0907901]
gi|119369269|sp|Q1JC92.1|ENGB_STRPB RecName: Full=Probable GTP-binding protein EngB
gi|119369270|sp|Q1JM76.1|ENGB_STRPC RecName: Full=Probable GTP-binding protein EngB
gi|119369271|sp|Q1JHC1.1|ENGB_STRPD RecName: Full=Probable GTP-binding protein EngB
gi|238058988|sp|B5XL04.1|ENGB_STRPZ RecName: Full=Probable GTP-binding protein EngB
gi|94541887|gb|ABF31936.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS9429]
gi|94543767|gb|ABF33815.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10270]
gi|94545769|gb|ABF35816.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS2096]
gi|209540440|gb|ACI61016.1| GTP-binding protein EngB [Streptococcus pyogenes NZ131]
gi|387934056|gb|EIK42169.1| GTP-binding protein YsxC [Streptococcus pyogenes HKU QMH11M0907901]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y R++L V+ L+D P K D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHAPSKEDIQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
+IP+ V TK DK+ K + + +K N+ +I+ SSV +G D+
Sbjct: 137 KYYDIPVIVVATKADKIPRGKWNKHESVVKKAL-----NFDKSDTFIVFSSVERIGIDD 190
>gi|227824394|ref|ZP_03989226.1| GTP-binding protein [Acidaminococcus sp. D21]
gi|352683495|ref|YP_004895478.1| GTP-binding protein [Acidaminococcus intestini RyC-MR95]
gi|226904893|gb|EEH90811.1| GTP-binding protein [Acidaminococcus sp. D21]
gi|350278148|gb|AEQ21338.1| GTP-binding protein [Acidaminococcus intestini RyC-MR95]
Length = 210
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 85/152 (55%), Gaps = 11/152 (7%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EFV S+ +A P+D E A +GRSNVGKSSL+N+L R+K LA S PGKTQ IN +
Sbjct: 12 EFVASAVKATQYPQDTVDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYS 71
Query: 83 -----------VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDA 131
+ ++Y VDLPGYGFA+ + WS+F Y N L V +L+D
Sbjct: 72 FRAKKTTEKEPLRHTFYAVDLPGYGFARTSQSQKNQWSAFICKYMENSRDLKLVCILMDI 131
Query: 132 SVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
P + D+DC WL IPL + TK DK+
Sbjct: 132 RHAPMESDIDCYQWLLSLGIPLMIILTKSDKL 163
>gi|160902807|ref|YP_001568388.1| ribosome biogenesis GTP-binding protein YsxC [Petrotoga mobilis
SJ95]
gi|189037183|sp|A9BHV0.1|ENGB_PETMO RecName: Full=Probable GTP-binding protein EngB
gi|160360451|gb|ABX32065.1| small GTP-binding protein [Petrotoga mobilis SJ95]
Length = 196
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + +K+ + +D P D+ E A GRSNVGKSS +NA++ K +A S PGKT+
Sbjct: 2 KVYKAQLIKTVYKIEDLPPPDKKEIAFAGRSNVGKSSFLNAILGIK-IAKVSSTPGKTRS 60
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN++LVN +Y VDLPGYGFA + W+ YF R SL V LLID PQK
Sbjct: 61 INYYLVNDKYYFVDLPGYGFASVSKQEKERWNVLMNEYFKTRFSLSAVSLLIDHRHMPQK 120
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIK 176
+D WL P F+ TK DK+ ++ + E+IK
Sbjct: 121 LDYAMVEWLKDLGTPFLFILTKSDKLTKSEKAKLFEDIK 159
>gi|331703271|ref|YP_004399958.1| putative GTP binding protein EngB [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328801826|emb|CBW53979.1| Probable GTP binding protein EngB [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 196
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSAANKSNWIDDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR++L GV LL+D P
Sbjct: 62 NFFEINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ +L NIP+ + TK DK+K ++ + ++ IK +E+
Sbjct: 122 DDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQED 169
>gi|269964580|ref|ZP_06178819.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|269830707|gb|EEZ84927.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 223
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 76 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 135
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W ++IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 136 FWAIDSHIPVQVLLTKADKLK--SGARKQTLLKVRKQV--ETFGGDVSVDVFSSLKGLGV 191
Query: 204 DEL 206
D+L
Sbjct: 192 DQL 194
>gi|167640704|ref|ZP_02398964.1| GTP-binding protein [Bacillus anthracis str. A0193]
gi|177654009|ref|ZP_02936050.1| GTP-binding protein [Bacillus anthracis str. A0174]
gi|254736573|ref|ZP_05194279.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Western North America USA6153]
gi|167511276|gb|EDR86662.1| GTP-binding protein [Bacillus anthracis str. A0193]
gi|172081064|gb|EDT66142.1| GTP-binding protein [Bacillus anthracis str. A0174]
Length = 198
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 RVTKADIVISAVKPEQYPDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L +IP + TK DK+ K ++ ++K ++ + + ++ SS
Sbjct: 122 DDVMMYDFLKHYDIPTIIIATKADKIPKGKWQK---HLKVVKETL--DIESGDEVVLFSS 176
Query: 198 VTGLGRDE 205
TGLG++E
Sbjct: 177 ETGLGKEE 184
>gi|91224945|ref|ZP_01260204.1| GTP-binding protein [Vibrio alginolyticus 12G01]
gi|91190191|gb|EAS76461.1| GTP-binding protein [Vibrio alginolyticus 12G01]
Length = 223
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 76 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 135
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W ++IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 136 FWAIDSHIPVQVLLTKADKLK--SGARKQTLLKVRKQV--ETFGGDVSVDVFSSLKGLGV 191
Query: 204 DEL 206
D+L
Sbjct: 192 DQL 194
>gi|84685376|ref|ZP_01013274.1| GTP-binding protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666533|gb|EAQ13005.1| GTP-binding protein [Rhodobacterales bacterium HTCC2654]
Length = 218
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ +F+K P DDR E GRSNVGKSSLINAL +K LA S PG+TQ IN
Sbjct: 28 QTDFLKGVVAMNGLPPDDRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINF 87
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F Y+VDLPGYGFA AP W K Y R SL +LID + +D
Sbjct: 88 FTTTDGPYLVDLPGYGFANAPVAVVEKWQKLLKSYLSGRASLRRAFVLIDTRHGIKAVDE 147
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L ++ + V TK DK+K A D+ +K ++ + ++ +P +MTSS G
Sbjct: 148 EIMTLLDKSAVTFQAVLTKADKVKAAD---RDKILKQVREKLSKHPAAYPELVMTSSEKG 204
Query: 201 LG 202
G
Sbjct: 205 DG 206
>gi|254228534|ref|ZP_04921959.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25]
gi|151938916|gb|EDN57749.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25]
Length = 223
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 76 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 135
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W ++IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 136 FWAIDSHIPVQVLLTKADKLK--SGARKQTLLKVRKQV--ETFGGDVSVDVFSSLKGLGV 191
Query: 204 DEL 206
D+L
Sbjct: 192 DQL 194
>gi|30264537|ref|NP_846914.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Ames]
gi|42783606|ref|NP_980853.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus ATCC
10987]
gi|47530000|ref|YP_021349.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. 'Ames Ancestor']
gi|49187361|ref|YP_030613.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Sterne]
gi|49480673|ref|YP_038519.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52141039|ref|YP_085792.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus E33L]
gi|65321838|ref|ZP_00394797.1| COG0218: Predicted GTPase [Bacillus anthracis str. A2012]
gi|118479635|ref|YP_896786.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis str. Al Hakam]
gi|165872017|ref|ZP_02216658.1| GTP-binding protein [Bacillus anthracis str. A0488]
gi|167636218|ref|ZP_02394522.1| GTP-binding protein [Bacillus anthracis str. A0442]
gi|170688697|ref|ZP_02879902.1| GTP-binding protein [Bacillus anthracis str. A0465]
gi|170708355|ref|ZP_02898799.1| GTP-binding protein [Bacillus anthracis str. A0389]
gi|190567036|ref|ZP_03019952.1| GTP-binding protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034435|ref|ZP_03101844.1| GTP-binding protein [Bacillus cereus W]
gi|196039265|ref|ZP_03106571.1| GTP-binding protein [Bacillus cereus NVH0597-99]
gi|196044931|ref|ZP_03112165.1| GTP-binding protein [Bacillus cereus 03BB108]
gi|206976023|ref|ZP_03236933.1| GTP-binding protein [Bacillus cereus H3081.97]
gi|217961961|ref|YP_002340531.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
AH187]
gi|218905671|ref|YP_002453505.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
AH820]
gi|222097915|ref|YP_002531972.1| ribosome biogenesis GTP-binding protein ysxc [Bacillus cereus Q1]
gi|225866450|ref|YP_002751828.1| GTP-binding protein [Bacillus cereus 03BB102]
gi|227817249|ref|YP_002817258.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. CDC 684]
gi|229601182|ref|YP_002868753.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. A0248]
gi|254687041|ref|ZP_05150899.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. CNEVA-9066]
gi|254724603|ref|ZP_05186386.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. A1055]
gi|254741611|ref|ZP_05199298.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Kruger B]
gi|254754791|ref|ZP_05206826.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Vollum]
gi|254757623|ref|ZP_05209650.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Australia 94]
gi|301055976|ref|YP_003794187.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|375286473|ref|YP_005106912.1| GTP-binding protein [Bacillus cereus NC7401]
gi|376268392|ref|YP_005121104.1| GTP-binding protein EngB like protein [Bacillus cereus F837/76]
gi|384182289|ref|YP_005568051.1| GTP-binding protein YsxC [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|386738362|ref|YP_006211543.1| GTP-binding protein engB [Bacillus anthracis str. H9401]
gi|402555399|ref|YP_006596670.1| GTP-binding protein YsxC [Bacillus cereus FRI-35]
gi|421509209|ref|ZP_15956116.1| GTP-binding protein YsxC [Bacillus anthracis str. UR-1]
gi|421640319|ref|ZP_16080904.1| GTP-binding protein YsxC [Bacillus anthracis str. BF1]
gi|423354961|ref|ZP_17332586.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
IS075]
gi|423373572|ref|ZP_17350911.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
AND1407]
gi|423549792|ref|ZP_17526119.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
ISP3191]
gi|423570708|ref|ZP_17546953.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
MSX-A12]
gi|423573852|ref|ZP_17549971.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
MSX-D12]
gi|423603871|ref|ZP_17579764.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD102]
gi|81824176|sp|Q633X5.1|ENGB_BACCZ RecName: Full=Probable GTP-binding protein EngB
gi|81828193|sp|Q6HD57.1|ENGB_BACHK RecName: Full=Probable GTP-binding protein EngB
gi|81830956|sp|Q72ZV7.1|ENGB_BACC1 RecName: Full=Probable GTP-binding protein EngB
gi|81837587|sp|Q81LC2.1|ENGB_BACAN RecName: Full=Probable GTP-binding protein EngB
gi|166225942|sp|A0RJ86.1|ENGB_BACAH RecName: Full=Probable GTP-binding protein EngB
gi|226741190|sp|B7HQM9.1|ENGB_BACC7 RecName: Full=Probable GTP-binding protein EngB
gi|226741193|sp|B7JQ62.1|ENGB_BACC0 RecName: Full=Probable GTP-binding protein EngB
gi|254783184|sp|C3P9F4.1|ENGB_BACAA RecName: Full=Probable GTP-binding protein EngB
gi|254783185|sp|C3L700.1|ENGB_BACAC RecName: Full=Probable GTP-binding protein EngB
gi|254783186|sp|C1ETR5.1|ENGB_BACC3 RecName: Full=Probable GTP-binding protein EngB
gi|254783187|sp|B9IZ44.1|ENGB_BACCQ RecName: Full=Probable GTP-binding protein EngB
gi|30259195|gb|AAP28400.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis
str. Ames]
gi|42739535|gb|AAS43461.1| GTP-binding protein [Bacillus cereus ATCC 10987]
gi|47505148|gb|AAT33824.1| GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181288|gb|AAT56664.1| GTP-binding protein [Bacillus anthracis str. Sterne]
gi|49332229|gb|AAT62875.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974508|gb|AAU16058.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418860|gb|ABK87279.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164712307|gb|EDR17843.1| GTP-binding protein [Bacillus anthracis str. A0488]
gi|167528439|gb|EDR91207.1| GTP-binding protein [Bacillus anthracis str. A0442]
gi|170126730|gb|EDS95613.1| GTP-binding protein [Bacillus anthracis str. A0389]
gi|170667383|gb|EDT18141.1| GTP-binding protein [Bacillus anthracis str. A0465]
gi|190562027|gb|EDV15996.1| GTP-binding protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195992977|gb|EDX56936.1| GTP-binding protein [Bacillus cereus W]
gi|196024419|gb|EDX63092.1| GTP-binding protein [Bacillus cereus 03BB108]
gi|196029892|gb|EDX68493.1| GTP-binding protein [Bacillus cereus NVH0597-99]
gi|206745775|gb|EDZ57172.1| GTP-binding protein [Bacillus cereus H3081.97]
gi|217067125|gb|ACJ81375.1| GTP-binding protein [Bacillus cereus AH187]
gi|218536600|gb|ACK88998.1| GTP-binding protein [Bacillus cereus AH820]
gi|221241973|gb|ACM14683.1| GTP-binding protein [Bacillus cereus Q1]
gi|225789215|gb|ACO29432.1| GTP-binding protein [Bacillus cereus 03BB102]
gi|227006669|gb|ACP16412.1| GTP-binding protein [Bacillus anthracis str. CDC 684]
gi|229265590|gb|ACQ47227.1| GTP-binding protein [Bacillus anthracis str. A0248]
gi|300378145|gb|ADK07049.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI]
gi|324328373|gb|ADY23633.1| GTP-binding protein YsxC [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358355000|dbj|BAL20172.1| GTP-binding protein [Bacillus cereus NC7401]
gi|364514192|gb|AEW57591.1| GTP-binding protein EngB like protein [Bacillus cereus F837/76]
gi|384388214|gb|AFH85875.1| GTP-binding protein engB [Bacillus anthracis str. H9401]
gi|401085540|gb|EJP93779.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
IS075]
gi|401096037|gb|EJQ04087.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
AND1407]
gi|401190380|gb|EJQ97425.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
ISP3191]
gi|401203335|gb|EJR10174.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
MSX-A12]
gi|401212421|gb|EJR19164.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
MSX-D12]
gi|401245557|gb|EJR51910.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD102]
gi|401796609|gb|AFQ10468.1| GTP-binding protein YsxC [Bacillus cereus FRI-35]
gi|401820661|gb|EJT19824.1| GTP-binding protein YsxC [Bacillus anthracis str. UR-1]
gi|403392565|gb|EJY89816.1| GTP-binding protein YsxC [Bacillus anthracis str. BF1]
Length = 198
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L +IP + TK DK+ K ++ ++K ++ + + ++ SS
Sbjct: 122 DDVMMYDFLKHYDIPTIIIATKADKIPKGKWQK---HLKVVKETL--DIESGDEVVLFSS 176
Query: 198 VTGLGRDE 205
TGLG++E
Sbjct: 177 ETGLGKEE 184
>gi|306829877|ref|ZP_07463064.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
ATCC 6249]
gi|401684726|ref|ZP_10816601.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
BS35b]
gi|419780500|ref|ZP_14306348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK100]
gi|304427888|gb|EFM30981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
ATCC 6249]
gi|383185234|gb|EIC77732.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK100]
gi|400184542|gb|EJO18781.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
BS35b]
Length = 195
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|315613539|ref|ZP_07888446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 49296]
gi|315314230|gb|EFU62275.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis ATCC 49296]
Length = 195
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|306824843|ref|ZP_07458187.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|417793767|ref|ZP_12441038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK255]
gi|304433054|gb|EFM36026.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|334272195|gb|EGL90565.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK255]
Length = 195
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|260583671|ref|ZP_05851419.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
gi|260158297|gb|EEW93365.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella
elegans ATCC 700633]
Length = 197
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ EF S+ P D + E A+ GRSNVGKSS IN L+++K LA TS KPGKTQ
Sbjct: 2 KVTNAEFTISAVGPNQYPTDQKVEIALSGRSNVGKSSFINRLIQRKSLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N +Y VD+PGYG+AK R W + Y RE+L VL+L+D P
Sbjct: 62 LNFYHINDLFYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRENLELVLILVDFRHEPST 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDK------------MKVAKGRRPDENIKSFQQLIREN 185
D+ +L IP + TKCDK ++ A G+ P+E +F E
Sbjct: 122 EDVQMREFLEYYEIPYRIIMTKCDKIPRGKWNKHVSQIRKAFGKPPEELFLTFSSETGEG 181
Query: 186 YPHHPPWI 193
WI
Sbjct: 182 VEKAWEWI 189
>gi|336064446|ref|YP_004559305.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
gi|334282646|dbj|BAK30219.1| GTP-binding protein [Streptococcus pasteurianus ATCC 43144]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 15 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 74
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ ++L
Sbjct: 75 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDLRHEPSADDVQMYDFL 134
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV G DE
Sbjct: 135 KYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFNKSDKFIIFSSVDRTGLDE 188
>gi|116627470|ref|YP_820089.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus LMD-9]
gi|386086275|ref|YP_006002149.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|386344274|ref|YP_006040438.1| GTP-binding protein EngB [Streptococcus thermophilus JIM 8232]
gi|387909367|ref|YP_006339673.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
gi|122267932|sp|Q03LM9.1|ENGB_STRTD RecName: Full=Probable GTP-binding protein EngB
gi|116100747|gb|ABJ65893.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312277988|gb|ADQ62645.1| GTPase EngB [Streptococcus thermophilus ND03]
gi|339277735|emb|CCC19483.1| putative GTP-binding protein EngB [Streptococcus thermophilus JIM
8232]
gi|387574302|gb|AFJ83008.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus MN-ZLW-002]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N +
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ VD+PGYG+A+ R W + Y + R++L V+ L+D P + D+
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKARAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSVT G
Sbjct: 133 YEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKK-----KLNFDKNDHFIVFSSVTRDG 187
Query: 203 RDE 205
DE
Sbjct: 188 YDE 190
>gi|262392690|ref|YP_003284544.1| GTP-binding protein EngB [Vibrio sp. Ex25]
gi|451972455|ref|ZP_21925663.1| GTP-binding protein EngB [Vibrio alginolyticus E0666]
gi|262336284|gb|ACY50079.1| GTP-binding protein EngB [Vibrio sp. Ex25]
gi|451931665|gb|EMD79351.1| GTP-binding protein EngB [Vibrio alginolyticus E0666]
Length = 219
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QNTHFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 68 LFKVEEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W ++IP+ + TK DK+K G R +K +Q+ E + + SS+
Sbjct: 128 QQMIFWAIDSHIPVQVLLTKADKLK--SGARKQTLLKVRKQV--ETFGGDVSVDVFSSLK 183
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 184 GLGVDQL 190
>gi|322375631|ref|ZP_08050143.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
gi|321279339|gb|EFX56380.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C300]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 10 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 69
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 70 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 129
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 130 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 184
Query: 202 GRDE 205
G D+
Sbjct: 185 GMDQ 188
>gi|408790465|ref|ZP_11202084.1| GTP-binding protein EngB [Lactobacillus florum 2F]
gi|408520189|gb|EKK20277.1| GTP-binding protein EngB [Lactobacillus florum 2F]
Length = 200
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ +V+ V S+ P PE LGRSNVGKSSL N L+ +K+ A TS +PGKTQ
Sbjct: 2 KVTDVQLVMSAVSPAQYPTTGYPEIGFLGRSNVGKSSLTNVLIERKDYAHTSGQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N Y VD+PGYG+AK R W+ + Y R +L GV+ LID+
Sbjct: 62 LNFYELNHKLYFVDVPGYGYAKVSKQAREKWAEMIETYLTQRSTLAGVVNLIDSRHALSD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
D +WL IP +V TK DK+ +K + ++++ QQL
Sbjct: 122 YDRQMHDWLAYYQIPTLYVATKMDKLAKSKVKAQAKDLQ--QQL 163
>gi|16125019|ref|NP_419583.1| GTPase EngB [Caulobacter crescentus CB15]
gi|367465544|ref|YP_002516178.3| ribosome biogenesis GTP-binding protein YsxC [Caulobacter
crescentus NA1000]
gi|13638031|sp|Q9ZG89.2|ENGB_CAUCR RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding
protein CgpA
gi|254783191|sp|B8H1E7.1|ENGB_CAUCN RecName: Full=Probable GTP-binding protein EngB
gi|13422003|gb|AAK22751.1| GTP-binding protein CgpA [Caulobacter crescentus CB15]
gi|220962914|gb|ACL94270.1| GTP-binding protein YihA [Caulobacter crescentus NA1000]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V F+ + R P D PE A GRSNVGKSSLIN LV +K LA S +PG+T+ IN F
Sbjct: 7 VSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTREINFF 66
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
L+ + +VDLPGYGFA+ + + Y R +L V +LIDA +K+DL+
Sbjct: 67 LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHGLKKVDLE 126
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+ L + V TK DK+K A+ D+ + Q+ I + P + TSS GL
Sbjct: 127 ALDALDVAAVSYQIVLTKADKIKPAE---VDKVVAETQKAIAKRAAAFPRVLATSSEKGL 183
Query: 202 GRDELLLHMSQL 213
G EL + +L
Sbjct: 184 GMPELRAEIVRL 195
>gi|403668370|ref|ZP_10933645.1| GTP-binding protein [Kurthia sp. JC8E]
Length = 205
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ + S+ + + P++ PEFA+ GRSNVGKSS IN ++ +K LA S KPGKTQ
Sbjct: 2 KVHNVDMIMSAVKPEQYPEEGYPEFALAGRSNVGKSSFINRMIGRKALARISAKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + + VD+PGYG+AK R W + Y + R L V+ +ID P
Sbjct: 62 LNFYKIEEQLFFVDVPGYGYAKVSKKEREAWGKMIETYLVARRQLKAVIQIIDLRHEPSD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D ++L NIP + TK DK+K K D ++K + ++ ++ + P I+ SS
Sbjct: 122 EDCMMYDFLKHYNIPTILIATKADKVKKGKW---DHHLKIIRNVLDKD--PNDPIILFSS 176
Query: 198 VTGLGRDE 205
TG G DE
Sbjct: 177 ETGKGFDE 184
>gi|313884146|ref|ZP_07817912.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620593|gb|EFR32016.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola
ACS-139-V-Col8]
Length = 198
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+ + E V S+ P+D PE A+ GRSNVGKSS IN+L+ +K LA TS +PGKTQ
Sbjct: 2 HVHDAELVISAVNPSQYPQDQLPEVALAGRSNVGKSSFINSLIARKNLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N+++ VD+PGYG+A+ R+ WS + Y RE++ + LL+D P +
Sbjct: 62 LNFYAINQAFRFVDVPGYGYARVSKDFRLAWSKMIEKYLSQRENMELLFLLMDMRHEPTR 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVA 166
+D + ++ ++P V TK DK+K A
Sbjct: 122 LDREMKDFAENLDLPYAIVLTKADKIKPA 150
>gi|334882265|emb|CCB83253.1| putative GTP-binding protein engB [Lactobacillus pentosus MP-10]
gi|339639090|emb|CCC18309.1| putative GTP-binding protein EngB [Lactobacillus pentosus IG1]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE V S+ P PE + GRSNVGKSSLIN L+ + A TS +PGKTQ
Sbjct: 2 EVHNVELVMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R W + Y R++L GV++L+DA P K
Sbjct: 62 LNFYKVEDQLYFVDVPGYGYAKVSKKEREKWGQMIETYLTTRDTLRGVVILVDARHAPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ W+ +PL V TK DK+ K + + IK N+ +I S+
Sbjct: 122 DDVAMYEWMRYYEMPLLVVATKSDKIPRGKWNKQESLIKKTL-----NFQPEDDFIAFSA 176
Query: 198 VTGLGRDEL 206
T G+D +
Sbjct: 177 KTKEGKDAV 185
>gi|300725096|ref|YP_003714424.1| GTPase [Xenorhabdus nematophila ATCC 19061]
gi|297631641|emb|CBJ92354.1| putative GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus nematophila ATCC
19061]
Length = 200
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
FV S+ + P+D E A GRSN GKSS +NAL R+K LA TSK PG+TQLIN F V
Sbjct: 4 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTRQKSLARTSKTPGRTQLINLFEV 63
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+VDLPGYG+A+ P+ + W Y RE L+G+++L+D P + +D+
Sbjct: 64 EDGIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLLGLVVLMDIRHPLKDLDMQMI 123
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W +P+ + TK DK+ A G R + K ++L + + + SS+ LG
Sbjct: 124 EWAVVMQVPVMVLLTKADKL--ASGARKSQLAKVREELAKLDGDVQVEYF--SSLKKLGI 179
Query: 204 DEL 206
D+L
Sbjct: 180 DKL 182
>gi|225855010|ref|YP_002736522.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae JJA]
gi|254783214|sp|C1CFF1.1|ENGB_STRZJ RecName: Full=Probable GTP-binding protein EngB
gi|225724050|gb|ACO19903.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHAPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|322372511|ref|ZP_08047047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C150]
gi|321277553|gb|EFX54622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
C150]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N +
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ VD+PGYG+A+ R W + Y + R++L V+ L+D P + D+
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSVT G
Sbjct: 133 YEFLKYYEIPVIVVATKADKIPRGKWNKHESVIKK-----KLNFDKNDHFIVFSSVTRDG 187
Query: 203 RDE 205
DE
Sbjct: 188 YDE 190
>gi|291533788|emb|CBL06901.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Megamonas
hypermegale ART12/1]
Length = 222
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I +++ S+ + P++ E A +GRSNVGKSSLIN+L R LA S +PGKTQ I
Sbjct: 22 IIRAKYIASAVKKAQYPEERLKEIAFIGRSNVGKSSLINSLTRVHNLARVSGQPGKTQTI 81
Query: 79 NHFLV---------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLI 129
N + + +K +++VDLPGYG+AK R W+ F + YFL+ E L V LI
Sbjct: 82 NFYELTARFNETGEDKLFHLVDLPGYGYAKTAQTNRKQWAKFIEEYFLHSEHLQFVCQLI 141
Query: 130 DASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
D P K D + +WL +NNIP+ + TK DK+
Sbjct: 142 DIRHEPMKSDKEMFDWLIKNNIPVLIIATKADKI 175
>gi|182684523|ref|YP_001836270.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae CGSP14]
gi|322377850|ref|ZP_08052339.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
gi|226741185|sp|B2IR86.1|ENGB_STRPS RecName: Full=Probable GTP-binding protein EngB
gi|182629857|gb|ACB90805.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|321281273|gb|EFX58284.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
M334]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 10 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 69
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 70 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 129
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 130 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 184
Query: 202 GRDE 205
G DE
Sbjct: 185 GMDE 188
>gi|15903469|ref|NP_359019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae R6]
gi|15459080|gb|AAL00230.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 10 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 69
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 70 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 129
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 130 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 184
Query: 202 GRDE 205
G DE
Sbjct: 185 GMDE 188
>gi|410457673|ref|ZP_11311464.1| GTP-binding protein YsxC [Bacillus azotoformans LMG 9581]
gi|409933658|gb|EKN70579.1| GTP-binding protein YsxC [Bacillus azotoformans LMG 9581]
Length = 193
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P D P FA+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTKAEIVISAVKPEQYPNDPWPHFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + +N +Y VD+PGYGFAK R W + Y E+L V+ ++D P +
Sbjct: 62 LNFYNINDIFYFVDVPGYGFAKVSKKDREAWGKMIETYLTTSENLRAVIQIVDIRHKPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D N+ +P+ + TK D K+ KG+ D+++K ++ + N + P + SS
Sbjct: 122 DDKLMYNFCKHYEMPVIIIATKAD--KIPKGKW-DKHLKVIKETL--NIDPNDPVVTFSS 176
Query: 198 VTGLGRDE 205
TG G+DE
Sbjct: 177 ETGKGKDE 184
>gi|306833688|ref|ZP_07466815.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis
ATCC 700338]
gi|304424458|gb|EFM27597.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis
ATCC 700338]
Length = 213
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 31 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 90
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ ++L
Sbjct: 91 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDLRHEPSADDVQMYDFL 150
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV G DE
Sbjct: 151 KYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFNKSDKFIIFSSVDRTGLDE 204
>gi|228478240|ref|ZP_04062848.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius SK126]
gi|312863700|ref|ZP_07723938.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
vestibularis F0396]
gi|340399275|ref|YP_004728300.1| putative GTP-binding protein engB [Streptococcus salivarius CCHSS3]
gi|387761729|ref|YP_006068706.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius 57.I]
gi|387783675|ref|YP_006069758.1| putative GTP-binding protein engB [Streptococcus salivarius
JIM8777]
gi|418018248|ref|ZP_12657804.1| putative GTP-binding protein [Streptococcus salivarius M18]
gi|421451945|ref|ZP_15901306.1| GTP-binding protein YihA [Streptococcus salivarius K12]
gi|228249919|gb|EEK09189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius SK126]
gi|311101236|gb|EFQ59441.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
vestibularis F0396]
gi|338743268|emb|CCB93776.1| putative GTP-binding protein engB [Streptococcus salivarius CCHSS3]
gi|338744557|emb|CCB94923.1| putative GTP-binding protein engB [Streptococcus salivarius
JIM8777]
gi|339292496|gb|AEJ53843.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
salivarius 57.I]
gi|345527097|gb|EGX30408.1| putative GTP-binding protein [Streptococcus salivarius M18]
gi|400182376|gb|EJO16638.1| GTP-binding protein YihA [Streptococcus salivarius K12]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N +
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ VD+PGYG+A+ R W + Y + R++L V+ L+D P + D+
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSVT G
Sbjct: 133 YEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKK-----KLNFDKNDHFIVFSSVTRDG 187
Query: 203 RDE 205
DE
Sbjct: 188 YDE 190
>gi|114330261|ref|YP_746483.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas eutropha
C91]
gi|122314688|sp|Q0AJF3.1|ENGB_NITEC RecName: Full=Probable GTP-binding protein EngB
gi|114307275|gb|ABI58518.1| cell division checkpoint GTPase YihA [Nitrosomonas eutropha C91]
Length = 223
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 85/163 (52%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
H + EF + KD P+ E A GRSN GKSS IN LV + A TSK PG+T
Sbjct: 3 HPLFRHAEFYTTVNHIKDLPQATGVEIAFAGRSNAGKSSAINTLVGRGRFAFTSKTPGRT 62
Query: 76 QLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPP 135
Q IN F + + ++VDLPGYG+A+ P R W Y R++L G++L++D P
Sbjct: 63 QHINFFQLGEERFMVDLPGYGYAQVPLAIRQHWVHLLSTYLQTRQALYGMILIMDIRHPL 122
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF 178
K+DL W + + + TK DK+ +K + I+ F
Sbjct: 123 TKLDLQMLEWFAQTGKLVHVLLTKADKLSRSKALAVLDEIRQF 165
>gi|410594728|ref|YP_006951455.1| GTP-binding protein EngB [Streptococcus agalactiae SA20-06]
gi|421531948|ref|ZP_15978323.1| GTP-binding protein YsxC [Streptococcus agalactiae STIR-CD-17]
gi|403642848|gb|EJZ03654.1| GTP-binding protein YsxC [Streptococcus agalactiae STIR-CD-17]
gi|410518367|gb|AFV72511.1| GTP-binding protein EngB [Streptococcus agalactiae SA20-06]
Length = 198
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 16 SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 75
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R+ W + Y + R++L V+ L+D P D+ +L
Sbjct: 76 LRFVDVPGYGYAKVSKTERVKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSANDIQMYEFL 135
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +IK + N+ +I+ SSV G DE
Sbjct: 136 KYYEIPVIIVATKADKIPRGKWNKHESSIKK-----KLNFDKKDHFIVFSSVDRTGLDE 189
>gi|52426052|ref|YP_089189.1| ribosome biogenesis GTP-binding protein YsxC [Mannheimia
succiniciproducens MBEL55E]
gi|81609396|sp|Q65R06.1|ENGB_MANSM RecName: Full=Probable GTP-binding protein EngB
gi|52308104|gb|AAU38604.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 205
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 84/143 (58%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ F+ S+ PKD+ E A GRSN GKS+ +NAL +K LA TSK PG+TQLIN
Sbjct: 10 KTHFMTSAANIHQLPKDEGMEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 69
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F V + +VDLPGYG+A P+ ++ W Y +RE L GV++L+D P + +D
Sbjct: 70 FEVEPQYKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLKGVVILMDIRHPLKDLDQ 129
Query: 141 DCANWLGRNNIPLTFVFTKCDKM 163
W +++P+ + TK DK+
Sbjct: 130 QMIEWAVSSDLPVLLLLTKADKL 152
>gi|414158850|ref|ZP_11415142.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0441]
gi|410868833|gb|EKS16797.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
F0441]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDNFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|342164187|ref|YP_004768826.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
gi|341934069|gb|AEL10966.1| GTP-binding protein YsxC [Streptococcus pseudopneumoniae IS7493]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|148543886|ref|YP_001271256.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
DSM 20016]
gi|184153286|ref|YP_001841627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
JCM 1112]
gi|227364794|ref|ZP_03848842.1| GTPase [Lactobacillus reuteri MM2-3]
gi|227544994|ref|ZP_03975043.1| GTPase [Lactobacillus reuteri CF48-3A]
gi|325682581|ref|ZP_08162098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
MM4-1A]
gi|338204254|ref|YP_004650399.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
SD2112]
gi|423332832|ref|ZP_17310614.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|166920113|sp|A5VJ95.1|ENGB_LACRD RecName: Full=Probable GTP-binding protein EngB
gi|229807536|sp|B2G6R5.1|ENGB_LACRJ RecName: Full=Probable GTP-binding protein EngB
gi|148530920|gb|ABQ82919.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016]
gi|183224630|dbj|BAG25147.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
gi|227070138|gb|EEI08513.1| GTPase [Lactobacillus reuteri MM2-3]
gi|227185011|gb|EEI65082.1| GTPase [Lactobacillus reuteri CF48-3A]
gi|324978420|gb|EGC15370.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
MM4-1A]
gi|336449494|gb|AEI58109.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri
SD2112]
gi|337727950|emb|CCC03039.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 196
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ S+ + PK + PE A++GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y RE L GV+ L+DA P
Sbjct: 62 LNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ NWL NIP V TK DK+K + R IK + P I+ S+
Sbjct: 122 DDVNMYNWLQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKTLDV-----ESSTPIILFSA 176
Query: 198 VTGLGRDEL 206
G+D++
Sbjct: 177 TEKKGKDDV 185
>gi|55820661|ref|YP_139103.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus LMG 18311]
gi|55822552|ref|YP_140993.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
thermophilus CNRZ1066]
gi|445373898|ref|ZP_21426336.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5460]
gi|445388795|ref|ZP_21428053.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5461]
gi|81820325|sp|Q5M0S3.1|ENGB_STRT1 RecName: Full=Probable GTP-binding protein EngB
gi|81820489|sp|Q5M5A9.1|ENGB_STRT2 RecName: Full=Probable GTP-binding protein EngB
gi|55736646|gb|AAV60288.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
gi|55738537|gb|AAV62178.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
gi|444750543|gb|ELW75345.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5461]
gi|444750719|gb|ELW75512.1| GTP-binding protein YsxC [Streptococcus thermophilus MTCC 5460]
Length = 199
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N +
Sbjct: 13 EILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYN 72
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
++ VD+PGYG+A+ R W + Y + R++L V+ L+D P + D+
Sbjct: 73 IDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQM 132
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+L IP+ V TK DK+ K + + IK + N+ + +I+ SSVT G
Sbjct: 133 YEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKK-----KLNFDKNDHFIVFSSVTRDG 187
Query: 203 RDE 205
DE
Sbjct: 188 YDE 190
>gi|417923037|ref|ZP_12566511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|418968520|ref|ZP_13520109.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|419766852|ref|ZP_14293027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
gi|342837311|gb|EGU71505.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK569]
gi|383352590|gb|EID30276.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383353623|gb|EID31228.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK579]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|330993394|ref|ZP_08317329.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
gi|329759424|gb|EGG75933.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1]
Length = 221
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 101/195 (51%), Gaps = 3/195 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E FV + + P PE A GRSNVGKSSLINAL ++ LA S +PG+T+ +N
Sbjct: 27 EFNFVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNF 86
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + +VD+PGYGFAKA + DW Y R +L V+LL+D+ V + D
Sbjct: 87 FEMAHRLTLVDMPGYGFAKAARAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKASDR 146
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L R + V TKCD V K ++ +++ + P + TSS TG
Sbjct: 147 EIMKMLDRAAVTFQVVLTKCD---VPKPNALAAKLREVSEIVATHAAAFPHVLATSSETG 203
Query: 201 LGRDELLLHMSQLRN 215
LG ++L +++L N
Sbjct: 204 LGIEDLRAELARLAN 218
>gi|300856720|ref|YP_003781704.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300436835|gb|ADK16602.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 196
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ + P D+R E A +GRSNVGKSSLIN L +K+L S PGKT+
Sbjct: 2 EIKQSEFIISAVSPRQYPVDNRVEVAFVGRSNVGKSSLINTLTNRKKLVKVSATPGKTRQ 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +Y+VDLPGYG+AK + W + + Y R+ L ++L++D P
Sbjct: 62 INFFLINNDFYLVDLPGYGYAKVSKKEKESWGNIIEKYLNARQQLKKIVLILDCRHKPTA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
D+ W+ N + V TK DK+
Sbjct: 122 DDITMYKWIKHYNYDIAIVATKIDKV 147
>gi|379705419|ref|YP_005203878.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantarius subsp. infantarius CJ18]
gi|374682118|gb|AEZ62407.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantarius subsp. infantarius CJ18]
Length = 197
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
I + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL
Sbjct: 6 NIHNASLLLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQL 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + ++ VD+PGYG+AK R W + Y ++R++L V+ L+D P
Sbjct: 66 LNFYNIDDKLRFVDVPGYGYAKVSKAERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSA 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L IP+ V TK DK+ K + + IK + N+ +++ SS
Sbjct: 126 DDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFDKSDKFVVFSS 180
Query: 198 VTGLGRDE 205
V G DE
Sbjct: 181 VDRTGLDE 188
>gi|337288112|ref|YP_004627584.1| GTP-binding protein engB [Thermodesulfobacterium sp. OPB45]
gi|334901850|gb|AEH22656.1| GTP-binding protein engB [Thermodesulfobacterium geofontis OPF15]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
K +EFVKS KD P PE A LGRSNVGKSSLINA++ +K +A S PG T+ IN
Sbjct: 3 KHIEFVKSIYDLKDLPPPKFPEIAFLGRSNVGKSSLINAILNRKNVARVSSTPGFTKAIN 62
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++ +Y+VDLPGYGFAKAP + W +GY ++L+ D P K+D
Sbjct: 63 FFRIDYQFYLVDLPGYGFAKAPAELQKKWKYLVEGYLTAPRDFRLLILIFDIRRTPDKLD 122
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
++ ++ P V K D + D+ +K++++ +R N P P ++++
Sbjct: 123 INLVEFVKYIKKPFCIVLNKID---ILSKNEIDKQVKNYKEALRLN-PDFPMFLVS 174
>gi|421894266|ref|ZP_16324756.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus IE-3]
gi|385272810|emb|CCG90128.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus IE-3]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE S+ R P+ PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVELQISAVRPDQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R W + Y +R+ L GV+ L+DA P
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ + + M S+
Sbjct: 122 DDITMYQYLRYYDIPVLVVATKSDKIARGKWNQHESKIKKAL-----DFDGNSAFQMFSA 176
Query: 198 VTGLGRDEL 206
T +G++E+
Sbjct: 177 QTKMGKEEV 185
>gi|221232329|ref|YP_002511482.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225861401|ref|YP_002742910.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Taiwan19F-14]
gi|307704382|ref|ZP_07641297.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307708345|ref|ZP_07644812.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|383938704|ref|ZP_09991908.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
gi|387788625|ref|YP_006253693.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|415700031|ref|ZP_11457762.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|415749976|ref|ZP_11477920.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|415752792|ref|ZP_11479774.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|417850059|ref|ZP_12495974.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|418123906|ref|ZP_12760837.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|418128451|ref|ZP_12765344.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|418137641|ref|ZP_12774479.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|418178629|ref|ZP_12815212.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|418221598|ref|ZP_12848251.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|418968445|ref|ZP_13520058.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|419440763|ref|ZP_13980808.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|419473637|ref|ZP_14013486.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|254783212|sp|B8ZLT0.1|ENGB_STRPJ RecName: Full=Probable GTP-binding protein EngB
gi|254783216|sp|C1CSI8.1|ENGB_STRZT RecName: Full=Probable GTP-binding protein EngB
gi|220674790|emb|CAR69363.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|225726988|gb|ACO22839.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|307615791|gb|EFN94997.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307622067|gb|EFO01089.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|339455392|gb|EGP67999.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1080]
gi|353795726|gb|EHD76072.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44378]
gi|353798950|gb|EHD79273.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP170]
gi|353842688|gb|EHE22734.1| hypothetical protein SPAR73_1562 [Streptococcus pneumoniae GA41565]
gi|353874908|gb|EHE54762.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47751]
gi|353900596|gb|EHE76147.1| hypothetical protein SPAR24_1540 [Streptococcus pneumoniae GA11663]
gi|379138367|gb|AFC95158.1| GTP-binding protein [Streptococcus pneumoniae ST556]
gi|379550801|gb|EHZ15897.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13430]
gi|379577833|gb|EHZ42750.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40410]
gi|381308439|gb|EIC49282.1| hypothetical protein CGSSpSV36_1391 [Streptococcus pneumoniae SV36]
gi|381315022|gb|EIC55786.1| hypothetical protein CGSSp4595_1568 [Streptococcus pneumoniae
459-5]
gi|381318270|gb|EIC58995.1| hypothetical protein CGSSpSV35_1673 [Streptococcus pneumoniae SV35]
gi|383340306|gb|EID18614.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK616]
gi|383714434|gb|EID70436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pseudopneumoniae SK674]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|194468441|ref|ZP_03074427.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
gi|194453294|gb|EDX42192.1| small GTP-binding protein [Lactobacillus reuteri 100-23]
Length = 196
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ V+ S+ + PK + PE A++GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 2 EVHNVDLTISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V Y VD+PGYG+AK R + + Y RE L GV+ L+DA P
Sbjct: 62 LNFYDVEDKVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTP 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ NWL NIP V TK DK+K + R IK + P I+ S+
Sbjct: 122 DDVNMYNWLQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKALDV-----ESSTPIILFSA 176
Query: 198 VTGLGRDEL 206
G+D++
Sbjct: 177 TEKKGKDDV 185
>gi|385260655|ref|ZP_10038798.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
gi|385190898|gb|EIF38326.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
SK140]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|294651641|ref|ZP_06728945.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter
haemolyticus ATCC 19194]
gi|292822490|gb|EFF81389.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter
haemolyticus ATCC 19194]
Length = 258
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 111/199 (55%), Gaps = 5/199 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+++ EF+ S+ + C +D E A GRSN GKSS INAL KK+LA SKKPG+TQ+I
Sbjct: 41 LRQAEFLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMI 100
Query: 79 NHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F L N +VDLPGYG+A P+ ++ W + Y ++R+SL G++LL+D P Q
Sbjct: 101 NFFSLGNPDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGLVLLMDIRHPLQH 160
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL W ++ + + TK DK+ + ++K + ++ ++ + SS
Sbjct: 161 FDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDFSIQ----LFSS 216
Query: 198 VTGLGRDELLLHMSQLRNY 216
+ +G +EL M+ NY
Sbjct: 217 LNRIGLEELASVMAGRLNY 235
>gi|375084541|ref|ZP_09731406.1| ribosome biogenesis GTP-binding protein YsxC [Megamonas funiformis
YIT 11815]
gi|374568045|gb|EHR39238.1| ribosome biogenesis GTP-binding protein YsxC [Megamonas funiformis
YIT 11815]
Length = 222
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I +++ S+ + P++ E A +GRSNVGKSSLIN+L R LA S +PGKTQ I
Sbjct: 22 IIRAKYIASAVKKAQYPEERLKEIAFIGRSNVGKSSLINSLTRVHNLARVSGQPGKTQTI 81
Query: 79 NHFLV---------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLI 129
N + + +K +++VDLPGYG+AK R W+ F + YFL+ E L V LI
Sbjct: 82 NFYELTARFNETGKDKLFHLVDLPGYGYAKTAQTNRKQWAKFIEEYFLHSEHLQFVCQLI 141
Query: 130 DASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
D P K D + +WL +NNIP+ + TK DK+
Sbjct: 142 DIRHEPMKSDKEMFDWLIKNNIPVLIIATKADKI 175
>gi|306831537|ref|ZP_07464695.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|304426322|gb|EFM29436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 213
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 31 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 90
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ ++L
Sbjct: 91 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDVQMYDFL 150
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV G DE
Sbjct: 151 KYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFDKSDKFIIFSSVDRTGLDE 204
>gi|15901411|ref|NP_346015.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae TIGR4]
gi|111658474|ref|ZP_01409147.1| hypothetical protein SpneT_02000374 [Streptococcus pneumoniae
TIGR4]
gi|116515393|ref|YP_816858.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae D39]
gi|148984920|ref|ZP_01818173.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71]
gi|148988622|ref|ZP_01820055.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73]
gi|148990171|ref|ZP_01821402.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|148993406|ref|ZP_01822923.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|148997364|ref|ZP_01824969.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|149003199|ref|ZP_01828095.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|149007516|ref|ZP_01831151.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|149007879|ref|ZP_01831466.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|149012699|ref|ZP_01833675.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149022038|ref|ZP_01836000.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72]
gi|168483553|ref|ZP_02708505.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168486831|ref|ZP_02711339.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|168488709|ref|ZP_02712908.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491538|ref|ZP_02715681.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|168493473|ref|ZP_02717616.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|168575234|ref|ZP_02721197.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|194397246|ref|YP_002038200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae G54]
gi|225859325|ref|YP_002740835.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 70585]
gi|237650251|ref|ZP_04524503.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974]
gi|237820866|ref|ZP_04596711.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974M2]
gi|298230527|ref|ZP_06964208.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255217|ref|ZP_06978803.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298503306|ref|YP_003725246.1| GTPase [Streptococcus pneumoniae TCH8431/19A]
gi|303255353|ref|ZP_07341423.1| GTPase EngB [Streptococcus pneumoniae BS455]
gi|303260195|ref|ZP_07346167.1| GTPase EngB [Streptococcus pneumoniae SP-BS293]
gi|303262586|ref|ZP_07348527.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292]
gi|303264988|ref|ZP_07350903.1| GTPase EngB [Streptococcus pneumoniae BS397]
gi|303266451|ref|ZP_07352339.1| GTPase EngB [Streptococcus pneumoniae BS457]
gi|303269033|ref|ZP_07354815.1| GTPase EngB [Streptococcus pneumoniae BS458]
gi|307068211|ref|YP_003877177.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|307127778|ref|YP_003879809.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387626791|ref|YP_006062967.1| putative GTP-binding protein [Streptococcus pneumoniae INV104]
gi|387757810|ref|YP_006064789.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|387759697|ref|YP_006066675.1| putative GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410476945|ref|YP_006743704.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae gamPNI0373]
gi|417313048|ref|ZP_12099760.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375]
gi|417677297|ref|ZP_12326704.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae
GA17545]
gi|417679550|ref|ZP_12328946.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570]
gi|417687015|ref|ZP_12336289.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301]
gi|417694460|ref|ZP_12343647.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae
GA47901]
gi|417696734|ref|ZP_12345912.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368]
gi|417698966|ref|ZP_12348137.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317]
gi|418074403|ref|ZP_12711656.1| hypothetical protein SPAR19_1546 [Streptococcus pneumoniae GA11184]
gi|418076799|ref|ZP_12714032.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47502]
gi|418079009|ref|ZP_12716231.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
4027-06]
gi|418081202|ref|ZP_12718412.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6735-05]
gi|418083372|ref|ZP_12720569.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44288]
gi|418085563|ref|ZP_12722742.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47281]
gi|418087258|ref|ZP_12724427.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47033]
gi|418089933|ref|ZP_12727087.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA43265]
gi|418092175|ref|ZP_12729316.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44452]
gi|418094358|ref|ZP_12731485.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49138]
gi|418096668|ref|ZP_12733779.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA16531]
gi|418098902|ref|ZP_12735999.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6901-05]
gi|418101028|ref|ZP_12738112.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
7286-06]
gi|418103270|ref|ZP_12740342.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP070]
gi|418105681|ref|ZP_12742737.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44500]
gi|418107999|ref|ZP_12745036.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41410]
gi|418110523|ref|ZP_12747544.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49447]
gi|418112913|ref|ZP_12749913.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41538]
gi|418115098|ref|ZP_12752084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5787-06]
gi|418117255|ref|ZP_12754224.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6963-05]
gi|418119013|ref|ZP_12755970.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA18523]
gi|418121640|ref|ZP_12758583.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44194]
gi|418126234|ref|ZP_12763140.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44511]
gi|418130727|ref|ZP_12767610.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07643]
gi|418133018|ref|ZP_12769889.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11304]
gi|418134776|ref|ZP_12771633.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11426]
gi|418139902|ref|ZP_12776727.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA13338]
gi|418142081|ref|ZP_12778894.1| hypothetical protein SPAR30_1467 [Streptococcus pneumoniae GA13455]
gi|418144531|ref|ZP_12781326.1| hypothetical protein SPAR31_1728 [Streptococcus pneumoniae GA13494]
gi|418146827|ref|ZP_12783605.1| hypothetical protein SPAR32_1600 [Streptococcus pneumoniae GA13637]
gi|418148947|ref|ZP_12785709.1| hypothetical protein SPAR34_1438 [Streptococcus pneumoniae GA13856]
gi|418151076|ref|ZP_12787822.1| hypothetical protein SPAR37_1488 [Streptococcus pneumoniae GA14798]
gi|418153303|ref|ZP_12790041.1| hypothetical protein SPAR38_1546 [Streptococcus pneumoniae GA16121]
gi|418155551|ref|ZP_12792279.1| hypothetical protein SPAR39_1513 [Streptococcus pneumoniae GA16242]
gi|418157857|ref|ZP_12794573.1| hypothetical protein SPAR41_1639 [Streptococcus pneumoniae GA16833]
gi|418160272|ref|ZP_12796971.1| hypothetical protein SPAR43_1612 [Streptococcus pneumoniae GA17227]
gi|418162600|ref|ZP_12799282.1| hypothetical protein SPAR49_1590 [Streptococcus pneumoniae GA17328]
gi|418164864|ref|ZP_12801533.1| hypothetical protein SPAR45_1500 [Streptococcus pneumoniae GA17371]
gi|418167174|ref|ZP_12803829.1| hypothetical protein SPAR52_1598 [Streptococcus pneumoniae GA17971]
gi|418169571|ref|ZP_12806213.1| hypothetical protein SPAR56_1665 [Streptococcus pneumoniae GA19077]
gi|418171705|ref|ZP_12808329.1| hypothetical protein SPAR58_1489 [Streptococcus pneumoniae GA19451]
gi|418173968|ref|ZP_12810580.1| hypothetical protein SPAR67_1573 [Streptococcus pneumoniae GA41277]
gi|418176366|ref|ZP_12812957.1| hypothetical protein SPAR71_1600 [Streptococcus pneumoniae GA41437]
gi|418180931|ref|ZP_12817500.1| hypothetical protein SPAR74_1541 [Streptococcus pneumoniae GA41688]
gi|418182469|ref|ZP_12819030.1| hypothetical protein SPAR78_0872 [Streptococcus pneumoniae GA43380]
gi|418185307|ref|ZP_12821848.1| hypothetical protein SPAR91_1495 [Streptococcus pneumoniae GA47283]
gi|418187561|ref|ZP_12824084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47360]
gi|418189810|ref|ZP_12826322.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47373]
gi|418192023|ref|ZP_12828525.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47388]
gi|418194153|ref|ZP_12830642.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47439]
gi|418196198|ref|ZP_12832676.1| hypothetical protein SPAR103_1395 [Streptococcus pneumoniae
GA47688]
gi|418198397|ref|ZP_12834856.1| hypothetical protein SPAR106_1485 [Streptococcus pneumoniae
GA47778]
gi|418200641|ref|ZP_12837084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47976]
gi|418202793|ref|ZP_12839222.1| hypothetical protein SPAR115_1513 [Streptococcus pneumoniae
GA52306]
gi|418214778|ref|ZP_12841512.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA54644]
gi|418217021|ref|ZP_12843701.1| hypothetical protein SPAR147_1492 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418219290|ref|ZP_12845955.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP127]
gi|418223770|ref|ZP_12850410.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5185-06]
gi|418225949|ref|ZP_12852577.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP112]
gi|418228076|ref|ZP_12854693.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
3063-00]
gi|418230354|ref|ZP_12856953.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
EU-NP01]
gi|418232570|ref|ZP_12859157.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07228]
gi|418234785|ref|ZP_12861361.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA08780]
gi|418237028|ref|ZP_12863595.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA19690]
gi|418239107|ref|ZP_12865658.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419423343|ref|ZP_13963556.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43264]
gi|419425517|ref|ZP_13965713.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7533-05]
gi|419427630|ref|ZP_13967811.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 5652-06]
gi|419429770|ref|ZP_13969934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA11856]
gi|419431960|ref|ZP_13972093.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP05]
gi|419433857|ref|ZP_13973975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40183]
gi|419436362|ref|ZP_13976450.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 8190-05]
gi|419438607|ref|ZP_13978675.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13499]
gi|419442928|ref|ZP_13982955.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13224]
gi|419445082|ref|ZP_13985097.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19923]
gi|419447227|ref|ZP_13987232.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7879-04]
gi|419449360|ref|ZP_13989356.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 4075-00]
gi|419451042|ref|ZP_13991028.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP02]
gi|419453755|ref|ZP_13993725.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP03]
gi|419455934|ref|ZP_13995891.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP04]
gi|419458171|ref|ZP_13998113.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02254]
gi|419460378|ref|ZP_14000306.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02270]
gi|419462728|ref|ZP_14002631.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02714]
gi|419465217|ref|ZP_14005108.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04175]
gi|419467180|ref|ZP_14007061.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05248]
gi|419469384|ref|ZP_14009252.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA06083]
gi|419471470|ref|ZP_14011329.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA07914]
gi|419475911|ref|ZP_14015748.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14688]
gi|419478220|ref|ZP_14018044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA18068]
gi|419480418|ref|ZP_14020223.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19101]
gi|419482624|ref|ZP_14022411.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40563]
gi|419484815|ref|ZP_14024590.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43257]
gi|419487055|ref|ZP_14026817.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44128]
gi|419489467|ref|ZP_14029216.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44386]
gi|419491485|ref|ZP_14031223.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47179]
gi|419493698|ref|ZP_14033423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47210]
gi|419495756|ref|ZP_14035473.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47461]
gi|419497946|ref|ZP_14037653.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47522]
gi|419500118|ref|ZP_14039812.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47597]
gi|419502222|ref|ZP_14041906.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47628]
gi|419504323|ref|ZP_14043991.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47760]
gi|419506467|ref|ZP_14046128.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49194]
gi|419508657|ref|ZP_14048309.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49542]
gi|419510831|ref|ZP_14050472.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae NP141]
gi|419512964|ref|ZP_14052596.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05578]
gi|419515089|ref|ZP_14054714.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae England14-9]
gi|419517168|ref|ZP_14056784.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02506]
gi|419519283|ref|ZP_14058889.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA08825]
gi|419521499|ref|ZP_14061094.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05245]
gi|419524153|ref|ZP_14063728.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13723]
gi|419526280|ref|ZP_14065839.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14373]
gi|419527907|ref|ZP_14067450.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17719]
gi|419530492|ref|ZP_14070019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40028]
gi|419532785|ref|ZP_14072300.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47794]
gi|419535035|ref|ZP_14074534.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17457]
gi|421207018|ref|ZP_15664070.1| hypothetical protein AMCSP20_001585 [Streptococcus pneumoniae
2090008]
gi|421209350|ref|ZP_15666363.1| hypothetical protein AMCSP11_001537 [Streptococcus pneumoniae
2070005]
gi|421211457|ref|ZP_15668439.1| hypothetical protein AMCSP03_001477 [Streptococcus pneumoniae
2070035]
gi|421215680|ref|ZP_15672601.1| hypothetical protein AMCSP04_001398 [Streptococcus pneumoniae
2070109]
gi|421221117|ref|ZP_15677950.1| hypothetical protein AMCSP05_001865 [Streptococcus pneumoniae
2070425]
gi|421222523|ref|ZP_15679314.1| hypothetical protein AMCSP14_000949 [Streptococcus pneumoniae
2070531]
gi|421225410|ref|ZP_15682148.1| hypothetical protein AMCSP06_001547 [Streptococcus pneumoniae
2070768]
gi|421227753|ref|ZP_15684455.1| hypothetical protein AMCSP08_001571 [Streptococcus pneumoniae
2072047]
gi|421230192|ref|ZP_15686856.1| hypothetical protein AMCSP01_001562 [Streptococcus pneumoniae
2061376]
gi|421232287|ref|ZP_15688928.1| hypothetical protein AMCSP16_001445 [Streptococcus pneumoniae
2080076]
gi|421234474|ref|ZP_15691092.1| hypothetical protein AMCSP02_001475 [Streptococcus pneumoniae
2061617]
gi|421238206|ref|ZP_15694776.1| hypothetical protein AMCSP15_000767 [Streptococcus pneumoniae
2071247]
gi|421241046|ref|ZP_15697591.1| hypothetical protein AMCSP17_001449 [Streptococcus pneumoniae
2080913]
gi|421243490|ref|ZP_15700005.1| hypothetical protein AMCSP09_001719 [Streptococcus pneumoniae
2081074]
gi|421245424|ref|ZP_15701922.1| hypothetical protein AMCSP10_001398 [Streptococcus pneumoniae
2081685]
gi|421247808|ref|ZP_15704290.1| hypothetical protein AMCSP18_001761 [Streptococcus pneumoniae
2082170]
gi|421249799|ref|ZP_15706256.1| hypothetical protein AMCSP19_001424 [Streptococcus pneumoniae
2082239]
gi|421266573|ref|ZP_15717453.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR27]
gi|421268735|ref|ZP_15719604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR95]
gi|421270991|ref|ZP_15721845.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR48]
gi|421273125|ref|ZP_15723966.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR55]
gi|421275297|ref|ZP_15726126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA52612]
gi|421279362|ref|ZP_15730168.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17301]
gi|421281567|ref|ZP_15732364.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04672]
gi|421283708|ref|ZP_15734494.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04216]
gi|421286028|ref|ZP_15736804.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60190]
gi|421287842|ref|ZP_15738605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58771]
gi|421290137|ref|ZP_15740887.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA54354]
gi|421292461|ref|ZP_15743195.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56348]
gi|421294864|ref|ZP_15745585.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56113]
gi|421296412|ref|ZP_15747121.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58581]
gi|421299034|ref|ZP_15749721.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60080]
gi|421301442|ref|ZP_15752112.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19998]
gi|421302958|ref|ZP_15753622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17484]
gi|421305527|ref|ZP_15756181.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62331]
gi|421307782|ref|ZP_15758424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60132]
gi|421309979|ref|ZP_15760604.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62681]
gi|421314460|ref|ZP_15765047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47562]
gi|444382588|ref|ZP_21180789.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8106]
gi|444386279|ref|ZP_21184340.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8203]
gi|444387789|ref|ZP_21185805.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS125219]
gi|444389333|ref|ZP_21187250.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS70012]
gi|444391724|ref|ZP_21189534.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS81218]
gi|444394622|ref|ZP_21192173.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0002]
gi|444398012|ref|ZP_21195495.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0006]
gi|444398919|ref|ZP_21196394.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0007]
gi|444401406|ref|ZP_21198593.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0008]
gi|444404146|ref|ZP_21201108.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0009]
gi|444407631|ref|ZP_21204298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0010]
gi|444418127|ref|ZP_21214120.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0360]
gi|444420563|ref|ZP_21216335.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0427]
gi|54037058|sp|P64073.1|ENGB_STRR6 RecName: Full=Probable GTP-binding protein EngB
gi|54040981|sp|P64072.1|ENGB_STRPN RecName: Full=Probable GTP-binding protein EngB
gi|122278296|sp|Q04JI0.1|ENGB_STRP2 RecName: Full=Probable GTP-binding protein EngB
gi|238690842|sp|B5E6L1.1|ENGB_STRP4 RecName: Full=Probable GTP-binding protein EngB
gi|254783211|sp|C1C8F9.1|ENGB_STRP7 RecName: Full=Probable GTP-binding protein EngB
gi|14973059|gb|AAK75655.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|116075969|gb|ABJ53689.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|147756419|gb|EDK63460.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|147758659|gb|EDK65656.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147760606|gb|EDK67580.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147760875|gb|EDK67845.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147763299|gb|EDK70237.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147922942|gb|EDK74058.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71]
gi|147924438|gb|EDK75527.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925823|gb|EDK76898.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73]
gi|147927961|gb|EDK78981.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|147929882|gb|EDK80871.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72]
gi|172043175|gb|EDT51221.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183570230|gb|EDT90758.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|183572689|gb|EDT93217.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574254|gb|EDT94782.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|183576321|gb|EDT96849.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|183578703|gb|EDT99231.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|194356913|gb|ACF55361.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae G54]
gi|225720438|gb|ACO16292.1| GTP-binding protein [Streptococcus pneumoniae 70585]
gi|298238901|gb|ADI70032.1| GTPase [Streptococcus pneumoniae TCH8431/19A]
gi|301794577|emb|CBW37021.1| putative GTP-binding protein [Streptococcus pneumoniae INV104]
gi|301800399|emb|CBW33030.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|301802286|emb|CBW35038.1| putative GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302597721|gb|EFL64797.1| GTPase EngB [Streptococcus pneumoniae BS455]
gi|302636303|gb|EFL66797.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292]
gi|302638692|gb|EFL69155.1| GTPase EngB [Streptococcus pneumoniae SP-BS293]
gi|302641423|gb|EFL71788.1| GTPase EngB [Streptococcus pneumoniae BS458]
gi|302644029|gb|EFL74288.1| GTPase EngB [Streptococcus pneumoniae BS457]
gi|302645507|gb|EFL75739.1| GTPase EngB [Streptococcus pneumoniae BS397]
gi|306409748|gb|ADM85175.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|306484840|gb|ADM91709.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|327389756|gb|EGE88101.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375]
gi|332072415|gb|EGI82898.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570]
gi|332072738|gb|EGI83219.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae
GA17545]
gi|332073905|gb|EGI84383.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301]
gi|332199612|gb|EGJ13687.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317]
gi|332200132|gb|EGJ14205.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368]
gi|332201009|gb|EGJ15080.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae
GA47901]
gi|353746536|gb|EHD27196.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
4027-06]
gi|353746939|gb|EHD27597.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47502]
gi|353748472|gb|EHD29124.1| hypothetical protein SPAR19_1546 [Streptococcus pneumoniae GA11184]
gi|353751941|gb|EHD32572.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6735-05]
gi|353754592|gb|EHD35204.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44288]
gi|353756272|gb|EHD36873.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47281]
gi|353758274|gb|EHD38866.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47033]
gi|353761124|gb|EHD41696.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA43265]
gi|353763530|gb|EHD44084.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44452]
gi|353764854|gb|EHD45402.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49138]
gi|353768389|gb|EHD48913.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA16531]
gi|353768884|gb|EHD49406.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6901-05]
gi|353771489|gb|EHD51998.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
7286-06]
gi|353774571|gb|EHD55058.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP070]
gi|353775857|gb|EHD56336.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44500]
gi|353778276|gb|EHD58744.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41410]
gi|353781920|gb|EHD62360.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA49447]
gi|353783275|gb|EHD63704.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA41538]
gi|353785182|gb|EHD65601.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5787-06]
gi|353787936|gb|EHD68334.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
6963-05]
gi|353790965|gb|EHD71346.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA18523]
gi|353792476|gb|EHD72848.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44194]
gi|353796174|gb|EHD76519.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA44511]
gi|353802051|gb|EHD82351.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07643]
gi|353804901|gb|EHD85179.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11304]
gi|353806332|gb|EHD86606.1| hypothetical protein SPAR30_1467 [Streptococcus pneumoniae GA13455]
gi|353806997|gb|EHD87269.1| hypothetical protein SPAR31_1728 [Streptococcus pneumoniae GA13494]
gi|353811283|gb|EHD91525.1| hypothetical protein SPAR34_1438 [Streptococcus pneumoniae GA13856]
gi|353812402|gb|EHD92637.1| hypothetical protein SPAR32_1600 [Streptococcus pneumoniae GA13637]
gi|353814286|gb|EHD94512.1| hypothetical protein SPAR37_1488 [Streptococcus pneumoniae GA14798]
gi|353816854|gb|EHD97062.1| hypothetical protein SPAR38_1546 [Streptococcus pneumoniae GA16121]
gi|353820410|gb|EHE00596.1| hypothetical protein SPAR39_1513 [Streptococcus pneumoniae GA16242]
gi|353822005|gb|EHE02181.1| hypothetical protein SPAR43_1612 [Streptococcus pneumoniae GA17227]
gi|353824305|gb|EHE04479.1| hypothetical protein SPAR41_1639 [Streptococcus pneumoniae GA16833]
gi|353827112|gb|EHE07266.1| hypothetical protein SPAR49_1590 [Streptococcus pneumoniae GA17328]
gi|353829166|gb|EHE09300.1| hypothetical protein SPAR52_1598 [Streptococcus pneumoniae GA17971]
gi|353829328|gb|EHE09461.1| hypothetical protein SPAR45_1500 [Streptococcus pneumoniae GA17371]
gi|353834162|gb|EHE14267.1| hypothetical protein SPAR56_1665 [Streptococcus pneumoniae GA19077]
gi|353835442|gb|EHE15536.1| hypothetical protein SPAR58_1489 [Streptococcus pneumoniae GA19451]
gi|353837924|gb|EHE18005.1| hypothetical protein SPAR67_1573 [Streptococcus pneumoniae GA41277]
gi|353840437|gb|EHE20501.1| hypothetical protein SPAR71_1600 [Streptococcus pneumoniae GA41437]
gi|353843003|gb|EHE23048.1| hypothetical protein SPAR74_1541 [Streptococcus pneumoniae GA41688]
gi|353848591|gb|EHE28603.1| hypothetical protein SPAR91_1495 [Streptococcus pneumoniae GA47283]
gi|353849546|gb|EHE29551.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47360]
gi|353850706|gb|EHE30710.1| hypothetical protein SPAR78_0872 [Streptococcus pneumoniae GA43380]
gi|353853537|gb|EHE33518.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47373]
gi|353855109|gb|EHE35079.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47388]
gi|353857731|gb|EHE37693.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47439]
gi|353860816|gb|EHE40756.1| hypothetical protein SPAR103_1395 [Streptococcus pneumoniae
GA47688]
gi|353862496|gb|EHE42428.1| hypothetical protein SPAR106_1485 [Streptococcus pneumoniae
GA47778]
gi|353864182|gb|EHE44100.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA47976]
gi|353867350|gb|EHE47245.1| hypothetical protein SPAR115_1513 [Streptococcus pneumoniae
GA52306]
gi|353869508|gb|EHE49389.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA54644]
gi|353870294|gb|EHE50167.1| hypothetical protein SPAR147_1492 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353873650|gb|EHE53509.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP127]
gi|353878568|gb|EHE58398.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
5185-06]
gi|353880471|gb|EHE60286.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
3063-00]
gi|353881146|gb|EHE60960.1| putative GTP-binding protein EngB [Streptococcus pneumoniae NP112]
gi|353885235|gb|EHE65024.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
EU-NP01]
gi|353886407|gb|EHE66189.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA08780]
gi|353887297|gb|EHE67077.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA07228]
gi|353891989|gb|EHE71739.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA19690]
gi|353892098|gb|EHE71847.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353902013|gb|EHE77543.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA11426]
gi|353904681|gb|EHE80131.1| putative GTP-binding protein EngB [Streptococcus pneumoniae
GA13338]
gi|379529835|gb|EHY95076.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02254]
gi|379530160|gb|EHY95400.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02714]
gi|379530514|gb|EHY95753.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02270]
gi|379536817|gb|EHZ02003.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04175]
gi|379537014|gb|EHZ02199.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13499]
gi|379538799|gb|EHZ03979.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05245]
gi|379542927|gb|EHZ08079.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05248]
gi|379544188|gb|EHZ09333.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA06083]
gi|379546186|gb|EHZ11325.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA07914]
gi|379549948|gb|EHZ15050.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA11856]
gi|379551628|gb|EHZ16722.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13224]
gi|379556561|gb|EHZ21616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA13723]
gi|379557525|gb|EHZ22569.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14373]
gi|379559007|gb|EHZ24038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA14688]
gi|379563196|gb|EHZ28200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17457]
gi|379565656|gb|EHZ30648.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA18068]
gi|379566060|gb|EHZ31051.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17719]
gi|379570372|gb|EHZ35336.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19101]
gi|379572775|gb|EHZ37732.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19923]
gi|379573400|gb|EHZ38355.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40028]
gi|379576858|gb|EHZ41782.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40183]
gi|379579216|gb|EHZ44123.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA40563]
gi|379581568|gb|EHZ46452.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43257]
gi|379585424|gb|EHZ50280.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44128]
gi|379585915|gb|EHZ50769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA43264]
gi|379587009|gb|EHZ51859.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA44386]
gi|379592271|gb|EHZ57087.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47210]
gi|379592847|gb|EHZ57662.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47179]
gi|379593842|gb|EHZ58653.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47461]
gi|379598779|gb|EHZ63564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47522]
gi|379599426|gb|EHZ64209.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47597]
gi|379600435|gb|EHZ65216.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47628]
gi|379605305|gb|EHZ70056.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47794]
gi|379605711|gb|EHZ70461.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47760]
gi|379608381|gb|EHZ73127.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49194]
gi|379611102|gb|EHZ75830.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA49542]
gi|379613183|gb|EHZ77896.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 8190-05]
gi|379614767|gb|EHZ79477.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7879-04]
gi|379617823|gb|EHZ82503.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 5652-06]
gi|379618978|gb|EHZ83652.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 7533-05]
gi|379621978|gb|EHZ86614.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae 4075-00]
gi|379622747|gb|EHZ87381.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP02]
gi|379625825|gb|EHZ90451.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP03]
gi|379627910|gb|EHZ92516.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP04]
gi|379629041|gb|EHZ93642.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae EU-NP05]
gi|379631434|gb|EHZ96011.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae NP141]
gi|379634129|gb|EHZ98694.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA05578]
gi|379635638|gb|EIA00197.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae England14-9]
gi|379639241|gb|EIA03785.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA02506]
gi|379641120|gb|EIA05658.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA08825]
gi|395572565|gb|EJG33160.1| hypothetical protein AMCSP03_001477 [Streptococcus pneumoniae
2070035]
gi|395573446|gb|EJG34036.1| hypothetical protein AMCSP11_001537 [Streptococcus pneumoniae
2070005]
gi|395574354|gb|EJG34932.1| hypothetical protein AMCSP20_001585 [Streptococcus pneumoniae
2090008]
gi|395579887|gb|EJG40382.1| hypothetical protein AMCSP04_001398 [Streptococcus pneumoniae
2070109]
gi|395585381|gb|EJG45765.1| hypothetical protein AMCSP05_001865 [Streptococcus pneumoniae
2070425]
gi|395588691|gb|EJG49019.1| hypothetical protein AMCSP14_000949 [Streptococcus pneumoniae
2070531]
gi|395588897|gb|EJG49219.1| hypothetical protein AMCSP06_001547 [Streptococcus pneumoniae
2070768]
gi|395593718|gb|EJG53960.1| hypothetical protein AMCSP01_001562 [Streptococcus pneumoniae
2061376]
gi|395594037|gb|EJG54277.1| hypothetical protein AMCSP08_001571 [Streptococcus pneumoniae
2072047]
gi|395594790|gb|EJG55025.1| hypothetical protein AMCSP16_001445 [Streptococcus pneumoniae
2080076]
gi|395600328|gb|EJG60485.1| hypothetical protein AMCSP02_001475 [Streptococcus pneumoniae
2061617]
gi|395603555|gb|EJG63691.1| hypothetical protein AMCSP15_000767 [Streptococcus pneumoniae
2071247]
gi|395606989|gb|EJG67089.1| hypothetical protein AMCSP09_001719 [Streptococcus pneumoniae
2081074]
gi|395607424|gb|EJG67521.1| hypothetical protein AMCSP17_001449 [Streptococcus pneumoniae
2080913]
gi|395607951|gb|EJG68047.1| hypothetical protein AMCSP10_001398 [Streptococcus pneumoniae
2081685]
gi|395613266|gb|EJG73295.1| hypothetical protein AMCSP18_001761 [Streptococcus pneumoniae
2082170]
gi|395613493|gb|EJG73521.1| hypothetical protein AMCSP19_001424 [Streptococcus pneumoniae
2082239]
gi|395866641|gb|EJG77769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR27]
gi|395867205|gb|EJG78329.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR48]
gi|395868989|gb|EJG80105.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR95]
gi|395873261|gb|EJG84353.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA52612]
gi|395874328|gb|EJG85414.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae SPAR55]
gi|395878855|gb|EJG89917.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17301]
gi|395880394|gb|EJG91446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04216]
gi|395880832|gb|EJG91883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA04672]
gi|395886015|gb|EJG97036.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60190]
gi|395886405|gb|EJG97421.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58771]
gi|395887822|gb|EJG98836.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA54354]
gi|395891768|gb|EJH02762.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56348]
gi|395893433|gb|EJH04420.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA56113]
gi|395895285|gb|EJH06260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58581]
gi|395899002|gb|EJH09946.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA19998]
gi|395900505|gb|EJH11443.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60080]
gi|395901580|gb|EJH12516.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA17484]
gi|395904485|gb|EJH15399.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62331]
gi|395907167|gb|EJH18061.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA60132]
gi|395909594|gb|EJH20469.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA62681]
gi|395913145|gb|EJH23998.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA47562]
gi|406369890|gb|AFS43580.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae gamPNI0373]
gi|429316435|emb|CCP36134.1| putative GTP-binding protein [Streptococcus pneumoniae SPN034156]
gi|429319779|emb|CCP33086.1| putative GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321595|emb|CCP35060.1| putative GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323415|emb|CCP31101.1| putative GTP-binding protein [Streptococcus pneumoniae SPN994038]
gi|444248007|gb|ELU54528.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8203]
gi|444251749|gb|ELU58217.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS125219]
gi|444251843|gb|ELU58310.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS8106]
gi|444257933|gb|ELU64266.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS70012]
gi|444259864|gb|ELU66173.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0002]
gi|444260669|gb|ELU66977.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0006]
gi|444264980|gb|ELU71016.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PCS81218]
gi|444268165|gb|ELU74039.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0008]
gi|444269655|gb|ELU75459.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0007]
gi|444271227|gb|ELU76978.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0010]
gi|444277375|gb|ELU82886.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0009]
gi|444282080|gb|ELU87364.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0360]
gi|444284239|gb|ELU89395.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae PNI0427]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|407706997|ref|YP_006830582.1| GntR family transcriptional regulator [Bacillus thuringiensis MC28]
gi|423377675|ref|ZP_17354959.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG1O-2]
gi|423440783|ref|ZP_17417689.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X2-1]
gi|423449049|ref|ZP_17425928.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5O-1]
gi|423463847|ref|ZP_17440615.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6O-1]
gi|423533200|ref|ZP_17509618.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB2-9]
gi|423541537|ref|ZP_17517928.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB4-10]
gi|423547770|ref|ZP_17524128.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB5-5]
gi|423615138|ref|ZP_17590972.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD115]
gi|423622443|ref|ZP_17598221.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD148]
gi|401128498|gb|EJQ36187.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5O-1]
gi|401171381|gb|EJQ78611.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB4-10]
gi|401178207|gb|EJQ85387.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB5-5]
gi|401261163|gb|EJR67327.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD148]
gi|401261994|gb|EJR68145.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD115]
gi|401638043|gb|EJS55795.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG1O-2]
gi|402418556|gb|EJV50851.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X2-1]
gi|402421054|gb|EJV53321.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6O-1]
gi|402464241|gb|EJV95939.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuB2-9]
gi|407384682|gb|AFU15183.1| GTP-binding protein [Bacillus thuringiensis MC28]
Length = 198
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH--PPWIMT 195
D+ ++L IP + TK DK+ P + ++++E ++
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKI-------PKGKWQKHLKVVKETLAVEIGDEIVLF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|288905455|ref|YP_003430677.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|325978445|ref|YP_004288161.1| ribosome biogenesis GTP-binding protein [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|386337900|ref|YP_006034069.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732181|emb|CBI13746.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|325178373|emb|CBZ48417.1| engB, yihA, ysxC; ribosome biogenesis GTP-binding protein
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|334280536|dbj|BAK28110.1| GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 197
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 15 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 74
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ ++L
Sbjct: 75 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDVQMYDFL 134
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV G DE
Sbjct: 135 KYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFDKSDKFIIFSSVDRTGLDE 188
>gi|430377431|ref|ZP_19431564.1| HSR1-like GTP-binding protein [Moraxella macacae 0408225]
gi|429540568|gb|ELA08597.1| HSR1-like GTP-binding protein [Moraxella macacae 0408225]
Length = 222
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+++ EF+ S+ K CP D E A GRSN GKSS INA+ +++LA +SK PG+TQ+I
Sbjct: 24 LQQTEFLLSAPTFKLCPDDTGLEVAFAGRSNAGKSSCINAITNQRQLARSSKTPGRTQMI 83
Query: 79 NHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F + + +VDLPGYG+A P+ + +W + + Y ++R+SL G++LL D P +
Sbjct: 84 NFFHMGDTKQRLVDLPGYGYAAVPESMKQEWQTELEKYLISRKSLTGLVLLSDIRHPLKF 143
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP 187
D +W N+P+ + TK DK+K + + + + L + N P
Sbjct: 144 FDEQMLHWANDGNLPVHLLLTKSDKLKYGAAKNTLQQVHN--HLAKLNLP 191
>gi|322387324|ref|ZP_08060934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|419842677|ref|ZP_14366014.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|321141853|gb|EFX37348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
gi|385703622|gb|EIG40735.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis ATCC 700779]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|295094046|emb|CBK83137.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus sp.
ART55/1]
Length = 198
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K E G P +D PE A G+SNVGKSSLIN L+ +K LA TS +PGKTQ I
Sbjct: 3 VKSAELETVCGITSKLPDNDLPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VNK+ Y VDLPGYG+AK R W + Y L V LLID P +
Sbjct: 63 NFYNVNKNLYFVDLPGYGYAKVSVEIRAKWGKMIERYLHGSPQLKKVFLLIDIRHVPSEN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT--S 196
D +W+ N + TK DK+K ++ ++ N+K LIRE P M S
Sbjct: 123 DCMMYDWIVDNGYEPVIICTKLDKIKRSQVQK---NLK----LIREKLDLVPGTTMIPFS 175
Query: 197 SVTGLGRDEL 206
+ T GRDE+
Sbjct: 176 AQTKQGRDEI 185
>gi|423400683|ref|ZP_17377856.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-2]
gi|423457285|ref|ZP_17434082.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5X2-1]
gi|423478609|ref|ZP_17455324.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6X1-1]
gi|401148647|gb|EJQ56137.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5X2-1]
gi|401654521|gb|EJS72062.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG2X1-2]
gi|402427409|gb|EJV59517.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6X1-1]
Length = 198
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH--PPWIMT 195
D+ ++L IP + TK DK+ P + ++++E ++
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKI-------PKGKWQKHLKVVKETLAVEIGDEIVLF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|418976387|ref|ZP_13524260.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
gi|383351474|gb|EID29268.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK575]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKVDKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|119369275|sp|Q0AWF4.2|ENGB_SYNWW RecName: Full=Probable GTP-binding protein EngB
Length = 193
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 7/196 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ E P + PE A+ GRSNVGKSSLIN + +K LA +S PGKT+
Sbjct: 4 KIKKAELEGIYVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRT 63
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN++L+N W++VDLPGYG+A+ + W + Y RE L GV+ L+D P +
Sbjct: 64 INYYLINDQWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGE 123
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +WL IP+ V TK DK+ ++G R ++I ++ + + P P ++ S+
Sbjct: 124 NDILMKDWLLHLQIPVLVVATKADKL--SRGARM-KHIAIIRKTL--DLPEMP--LVFSA 176
Query: 198 VTGLGRDELLLHMSQL 213
+G G +EL +++L
Sbjct: 177 QSGDGVEELKAALAEL 192
>gi|329114453|ref|ZP_08243215.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
gi|326696529|gb|EGE48208.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001]
Length = 227
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EFV + R P PE A GRSNVGKSSL+NAL +K LA S +PG+T+ +N F
Sbjct: 34 EFVFGAQRLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 93
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ +VD+PGYG+AKA + DW Y R SL V+LL+DA V + DL+
Sbjct: 94 LADRLMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVEMKAHDLEV 153
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+ L + + V TKCD +K R +++ IR + P +TSS TG G
Sbjct: 154 MDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEA---EIRRHPAAFPYLSLTSSQTGEG 210
Query: 203 RDELLLHMSQL 213
+ L +++
Sbjct: 211 IEGLRAELAEF 221
>gi|320530216|ref|ZP_08031286.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis
F0399]
gi|320137649|gb|EFW29561.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis
F0399]
Length = 207
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 9/149 (6%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
++ S+ R P+ RPE A +GRSNVGKSSLIN+L R ++LA S KPGKTQ IN + +
Sbjct: 12 YLSSAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTINFYEL 71
Query: 84 ---------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
S +IVDLPGYG+AKA +R W+ F + YFL E L V LL+D
Sbjct: 72 LLRIDGGEERHSVHIVDLPGYGYAKAARDSRKIWAKFIEEYFLTSEYLRFVCLLLDIRHL 131
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
P + D + +WL ++IP+ V TK DK+
Sbjct: 132 PMESDRNMFSWLIAHDIPVLVVATKADKL 160
>gi|350529888|ref|ZP_08908829.1| GTP-binding protein YsxC [Vibrio rotiferianus DAT722]
Length = 219
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|320353916|ref|YP_004195255.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
gi|320122418|gb|ADW17964.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus
propionicus DSM 2032]
Length = 209
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++V+F+ S+ P P+ A GRSNVGKSSL+N LV + L TS KPGKTQ +N
Sbjct: 5 RKVQFLLSAHAIGQLPAPVYPDIAFAGRSNVGKSSLLNRLVDRSNLVKTSSKPGKTQSLN 64
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
+FLV +S Y+VDLPGYG+A+ TR W Y R +L V+++ID +++D
Sbjct: 65 YFLVEESLYLVDLPGYGYAQVSQQTRQSWQGLITEYVTTRSTLACVVVIIDLRHELKQLD 124
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
+ +WL + P V+TK DK+ + + + + L ++ I+ SS T
Sbjct: 125 RELVDWLRYLDTPYLPVYTKADKLSRNQQMKNAAALDAGLTLTADDR------IIFSSST 178
Query: 200 GLGRDELLLHMS 211
G G D L +S
Sbjct: 179 GQGLDSLRSRLS 190
>gi|309799590|ref|ZP_07693816.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308116778|gb|EFO54228.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKNEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|336313796|ref|ZP_08568718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rheinheimera sp.
A13L]
gi|335881735|gb|EGM79612.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Rheinheimera sp.
A13L]
Length = 204
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 87/144 (60%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ K P D E A GRSN GKSS +N L R+ LA TSK PG+TQLIN
Sbjct: 9 QKATFLTSAPDIKALPADTGIEVAFAGRSNAGKSSALNTLTRQNGLARTSKTPGRTQLIN 68
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++++ ++DLPGYGFAK P + W Y + RESL G+++L+D P + +D
Sbjct: 69 TFSLSENQRLIDLPGYGFAKVPLAVKEKWQKALSEYLIKRESLKGIVILMDIRHPLKDLD 128
Query: 140 LDCANWLGRNNIPLTFVFTKCDKM 163
D +W ++N+ + + TK DK+
Sbjct: 129 QDLIHWAVQSNLQVLLLLTKADKL 152
>gi|27364347|ref|NP_759875.1| GTP-binding protein YsxC [Vibrio vulnificus CMCP6]
gi|27360466|gb|AAO09402.1| GTP-binding protein EngB [Vibrio vulnificus CMCP6]
Length = 220
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 12 QNTHFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLIN 71
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 LFKVTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 131
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R E +K + + E + + SS+
Sbjct: 132 QQMIFWAIESRIPVQVLLTKADKLK--SGARKAELLKVRK--LAETFGGDVQVDVYSSLK 187
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 188 GLGVDQL 194
>gi|387907300|ref|YP_006337636.1| GTP-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582193|gb|AFJ90971.1| GTP-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 211
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 109/203 (53%), Gaps = 5/203 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I V+F S + PE+A +GRSNVGKSSLIN++ +KK +A S PG+TQ
Sbjct: 2 KITSVKFKVSLKNMNQLFVHNFPEYAFIGRSNVGKSSLINSIAKKK-IAKVSSSPGRTQC 60
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N+FL+N WY+VDLPGYGF + K Y +++++ + LLID+ QK
Sbjct: 61 MNYFLINHKWYLVDLPGYGFFSVKR-DKKKTQKLIKNYIFHKKNITYLFLLIDSRFIIQK 119
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
IDL L VFTK DK+K R D+NI + I +N + P W S+
Sbjct: 120 IDLYFIQKLNDIKTHFCIVFTKTDKLK--NHRFVDQNISLCIKEIEKNGFYMPIWFKVSA 177
Query: 198 VTGLGRDELLLHMSQLRN-YWDQ 219
G + L+ ++ +L + Y DQ
Sbjct: 178 KNKYGINNLIQYIKKLNDSYQDQ 200
>gi|328952831|ref|YP_004370165.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
gi|328453155|gb|AEB08984.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I EFV S+ + + P PE A GRSNVGKSSLINAL+ ++ L TS +PG TQ
Sbjct: 5 KILSAEFVVSAHQIEQLPGGVLPEVAFWGRSNVGKSSLINALLHRQNLVRTSSRPGCTQA 64
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN+FLVN+ W+ VDLPGYG+A+AP + W Y ++ L V+ L+DA P
Sbjct: 65 INYFLVNRVWHFVDLPGYGYAQAPLPVKEKWLRLISTYLETQKRLRAVVWLLDARRQPGP 124
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+LD + L + V TK DK+K +G+R + QL +I S+
Sbjct: 125 EELDWLDRLRSWRQEVVVVLTKADKIK--RGQRDRRQSEIAAQLAPSGVKAQ-DFIWFST 181
Query: 198 VTGLGRDEL 206
+T GR EL
Sbjct: 182 LTQEGRREL 190
>gi|417915483|ref|ZP_12559092.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. SK95]
gi|342833322|gb|EGU67603.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. SK95]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +++ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFVLFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|417847325|ref|ZP_12493293.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1073]
gi|339456973|gb|EGP69554.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SK1073]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDNKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVGTKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|335029647|ref|ZP_08523154.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
gi|334268944|gb|EGL87376.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK1076]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|322391569|ref|ZP_08065038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
gi|321145652|gb|EFX41044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris
ATCC 700780]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|254788440|ref|YP_003075869.1| ribosome biogenesis GTP-binding protein YsxC [Teredinibacter
turnerae T7901]
gi|259645908|sp|C5BJZ8.1|ENGB_TERTT RecName: Full=Probable GTP-binding protein EngB
gi|237684556|gb|ACR11820.1| putative GTP-binding protein [Teredinibacter turnerae T7901]
Length = 214
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ +F+ S+ ++CP ++ E A GRSN GKSS IN L +LA TSK PG+TQLI
Sbjct: 6 FRNAQFLISAPSLRECPAEEGAEVAFAGRSNAGKSSAINCLTNNGKLARTSKTPGRTQLI 65
Query: 79 NHFLVNK--SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
N F + + +VDLPGYG+AK P T+ +W + Y R+ L G++LL+D P Q
Sbjct: 66 NFFSLGQGAQQRLVDLPGYGYAKVPLATKREWQAHLSEYLYKRKCLRGLVLLMDIRHPMQ 125
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMK 164
+ D NW N+P+ + TK DK+K
Sbjct: 126 EFDTMMLNWAVDANMPVHLLLTKSDKLK 153
>gi|331265986|ref|YP_004325616.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326682658|emb|CBZ00275.1| GTP-binding protein, putative [Streptococcus oralis Uo5]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+ +
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKV 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|269959442|ref|ZP_06173825.1| GTP-binding protein [Vibrio harveyi 1DA3]
gi|269835879|gb|EEZ89955.1| GTP-binding protein [Vibrio harveyi 1DA3]
Length = 223
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 76 EEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 135
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 136 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 191
Query: 204 DEL 206
D+L
Sbjct: 192 DQL 194
>gi|37678371|ref|NP_932980.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio vulnificus
YJ016]
gi|37197110|dbj|BAC92951.1| predicted GTPase [Vibrio vulnificus YJ016]
Length = 220
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 12 QNTHFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLIN 71
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 LFKVTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 131
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R E +K + + E + + SS+
Sbjct: 132 QQMIFWAIESRIPVQVLLTKADKLK--SGARKAELLKVRK--LAETFGGDVQVDVYSSLK 187
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 188 GLGVDQL 194
>gi|291542676|emb|CBL15786.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus
bromii L2-63]
Length = 200
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
EV F ++GR P+ D PE G SNVGKSSLIN LV++K LA S +PGKT IN
Sbjct: 5 EVAFEFAAGRVDQLPESDMPEIVFSGHSNVGKSSLINKLVQRKALARVSAQPGKTATINF 64
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
+ + K + +VDLPGYG+AK + W+ +GYF V+ ++D PP DL
Sbjct: 65 YKL-KEFRMVDLPGYGYAKVSKAEKDRWAKLVEGYFAQDRQRPLVIQILDLRHPPTDDDL 123
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
++L R V TK DK+K + E K I H P I S+ TG
Sbjct: 124 HMIDFLYRGGFNFAAVLTKSDKLKKTAFEKQIEYYKDIFSTI-----EHVPLIPFSAQTG 178
Query: 201 LGRDEL 206
G DE+
Sbjct: 179 FGNDEI 184
>gi|116492901|ref|YP_804636.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus
pentosaceus ATCC 25745]
gi|122265635|sp|Q03F28.1|ENGB_PEDPA RecName: Full=Probable GTP-binding protein EngB
gi|116103051|gb|ABJ68194.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ VE S+ R P+ PE A++GRSNVGKSSL N L+ +K A TS +PGKTQ
Sbjct: 2 EVHNVELQISAVRPDQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + V + VD+PGYG+AK R W + Y +R+ L GV+ L+DA P
Sbjct: 62 LNFYRVEDQLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +L +IP+ V TK DK+ K + + IK ++ + M S+
Sbjct: 122 DDITMYQYLRYYDIPVLVVATKSDKIARGKWNQHESKIKKAL-----DFDGSSAFQMFSA 176
Query: 198 VTGLGRDEL 206
T +G++E+
Sbjct: 177 QTKMGKEEV 185
>gi|424048317|ref|ZP_17785871.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-03]
gi|408882952|gb|EKM21747.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-03]
Length = 219
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QNTHFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 68 LFKVEEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R +K +Q+ E + + SS+
Sbjct: 128 QQMIFWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLK 183
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 184 GLGVDQL 190
>gi|163802213|ref|ZP_02196108.1| GTP-binding protein [Vibrio sp. AND4]
gi|159174018|gb|EDP58828.1| GTP-binding protein [Vibrio sp. AND4]
Length = 223
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 12 QNTHFITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLIN 71
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 LFKVQEGCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 131
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R +K +Q E + + SS+
Sbjct: 132 QQMIFWAIDSRIPVQVLLTKADKLK--SGARKQTLLKVRKQ--AETFGGDVSVDVFSSLK 187
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 188 GLGVDQL 194
>gi|421236675|ref|ZP_15693272.1| hypothetical protein AMCSP07_001482 [Streptococcus pneumoniae
2071004]
gi|395601438|gb|EJG61585.1| hypothetical protein AMCSP07_001482 [Streptococcus pneumoniae
2071004]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHETAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|171778306|ref|ZP_02919512.1| hypothetical protein STRINF_00354 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283006|gb|EDT48430.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantarius subsp. infantarius ATCC BAA-102]
Length = 203
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 21 SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 80
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ +L
Sbjct: 81 LRFVDVPGYGYAKVSKAERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDIQMYEFL 140
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +++ SSV G DE
Sbjct: 141 KYYEIPVIVVATKADKIPHGKWNKHESAIKK-----KLNFDKSDKFVVFSSVDRTGLDE 194
>gi|320546907|ref|ZP_08041209.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus
ATCC 9812]
gi|320448425|gb|EFW89166.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus
ATCC 9812]
Length = 197
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 15 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 74
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y ++R++L V+ L+D P D+ +L
Sbjct: 75 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDIQMYEFL 134
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK + N+ +I+ SSV G DE
Sbjct: 135 KYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLNFDKTDKFIIFSSVDRTGLDE 188
>gi|169832607|ref|YP_001694973.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae Hungary19A-6]
gi|238688373|sp|B1ICY8.1|ENGB_STRPI RecName: Full=Probable GTP-binding protein EngB
gi|168995109|gb|ACA35721.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
Length = 195
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKE 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|422884265|ref|ZP_16930714.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK49]
gi|332360698|gb|EGJ38507.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
sanguinis SK49]
Length = 195
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 5/178 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F ++
Sbjct: 13 SAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDDK 72
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+A+ R W + Y +RE+L V+ L+D P D+ +L
Sbjct: 73 LRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEFL 132
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRD 204
+IP+ V TK DK+ K + + IK + ++ + +I+ SSVT G D
Sbjct: 133 KYYDIPVVLVATKADKIPRGKWNKHESAIKK-----KLDFDKNDDFILFSSVTKDGLD 185
>gi|119370483|sp|Q7MQ23.2|ENGB_VIBVY RecName: Full=Probable GTP-binding protein EngB
Length = 216
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QNTHFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 68 LFKVTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R E +K + + E + + SS+
Sbjct: 128 QQMIFWAIESRIPVQVLLTKADKLK--SGARKAELLKVRK--LAETFGGDVQVDVYSSLK 183
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 184 GLGVDQL 190
>gi|114567167|ref|YP_754321.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114338102|gb|ABI68950.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 7/196 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ E P + PE A+ GRSNVGKSSLIN + +K LA +S PGKT+
Sbjct: 30 KIKKAELEGIYVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRT 89
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN++L+N W++VDLPGYG+A+ + W + Y RE L GV+ L+D P +
Sbjct: 90 INYYLINDQWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGE 149
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ +WL IP+ V TK DK+ ++G R ++I ++ + + P P ++ S+
Sbjct: 150 NDILMKDWLLHLQIPVLVVATKADKL--SRGARM-KHIAIIRKTL--DLPEMP--LVFSA 202
Query: 198 VTGLGRDELLLHMSQL 213
+G G +EL +++L
Sbjct: 203 QSGDGVEELKAALAEL 218
>gi|320157740|ref|YP_004190119.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O]
gi|119370482|sp|Q8DDQ8.2|ENGB_VIBVU RecName: Full=Probable GTP-binding protein EngB
gi|319933052|gb|ADV87916.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O]
Length = 216
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QNTHFITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V + +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 68 LFKVTEGCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W + IP+ + TK DK+K G R E +K + + E + + SS+
Sbjct: 128 QQMIFWAIESRIPVQVLLTKADKLK--SGARKAELLKVRK--LAETFGGDVQVDVYSSLK 183
Query: 200 GLGRDEL 206
GLG D+L
Sbjct: 184 GLGVDQL 190
>gi|399907896|ref|ZP_10776448.1| GTP-binding protein YsxC [Halomonas sp. KM-1]
Length = 214
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ CP DD E A GRSN GKSS IN L R+K LA TS+ PG+TQLIN
Sbjct: 7 QSARFLISAPTLAKCPVDDGAEVAFAGRSNAGKSSAINTLTRQKALARTSRTPGRTQLIN 66
Query: 80 HFLVNK--SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
F + S +VDLPGYG+AK P+ +++W Y R SL G++L++D P +
Sbjct: 67 FFSLGDDISRRLVDLPGYGYAKVPEAVKLEWQRHLAEYLEGRHSLRGLVLVMDVRHPLTE 126
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKS 177
D W + P+ + TK DK+K + + ++S
Sbjct: 127 FDQTLLGWADDQDKPVHILLTKADKLKSGAAKNALQQVRS 166
>gi|389578832|ref|ZP_10168859.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
gi|389400467|gb|EIM62689.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Desulfobacter
postgatei 2ac9]
Length = 199
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 92/150 (61%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+I+ VEF+KS+ + P+ D PE A GRSNVGKSSLIN L+ +K++ TS +PG TQL
Sbjct: 2 KIRAVEFIKSAVKPAQYPEYDFPEIAFAGRSNVGKSSLINTLINRKDMVKTSSRPGCTQL 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN FL+N +VDLPGYG+AK R W + Y R++L+G++LLID P K
Sbjct: 62 INFFLINDGLSLVDLPGYGYAKVSKKIRAQWQPMVETYMGTRKNLLGLILLIDIRRDPGK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAK 167
+L+ WL IP V TK DK+ K
Sbjct: 122 EELEMVRWLETKQIPCLLVLTKADKLSKTK 151
>gi|52081302|ref|YP_080093.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647215|ref|ZP_08001437.1| GTPase EngB [Bacillus sp. BT1B_CT2]
gi|404490181|ref|YP_006714287.1| GTP-binding protein YsxC [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683281|ref|ZP_17658120.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis WX-02]
gi|81825232|sp|Q65GJ7.1|ENGB_BACLD RecName: Full=Probable GTP-binding protein EngB
gi|52004513|gb|AAU24455.1| GTP-binding domain,Small GTP-binding protein domain [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52349183|gb|AAU41817.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390562|gb|EFV71367.1| GTPase EngB [Bacillus sp. BT1B_CT2]
gi|383440055|gb|EID47830.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
licheniformis WX-02]
Length = 195
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 5/196 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y +RE L V+ ++D P +
Sbjct: 62 LNFYIINDVLHFVDVPGYGFAKVSKTEREAWGRMIETYLTSREELKAVVQIVDLRHAPSQ 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ ++L IP+ + TK DK+ K + + +K + +E+ I+ SS
Sbjct: 122 DDVMMYDFLKHYEIPVIVIATKADKIPKGKWEKHAKVVKETLNIEKEDR-----LILFSS 176
Query: 198 VTGLGRDELLLHMSQL 213
T G+ E + Q+
Sbjct: 177 ETKKGKQEAWSAIEQM 192
>gi|417938689|ref|ZP_12581984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
gi|343390933|gb|EGV03511.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis SK970]
Length = 195
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYKIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|25011424|ref|NP_735819.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae NEM316]
gi|81845601|sp|Q8E4L9.1|ENGB_STRA3 RecName: Full=Probable GTP-binding protein EngB
gi|24412962|emb|CAD47041.1| unknown [Streptococcus agalactiae NEM316]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 16 SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 75
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y + R++L V+ L+D P D+ +L
Sbjct: 76 LRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQIYEFL 135
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +IK + N+ +I+ SSV G DE
Sbjct: 136 KYYEIPVIIVATKADKIPRGKWNKHESSIKK-----KLNFDKKDHFIVFSSVDRTGLDE 189
>gi|163942217|ref|YP_001647101.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
weihenstephanensis KBAB4]
gi|423368515|ref|ZP_17345947.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD142]
gi|423452235|ref|ZP_17429088.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5X1-1]
gi|423470684|ref|ZP_17447428.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6O-2]
gi|423489646|ref|ZP_17466328.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BtB2-4]
gi|423495369|ref|ZP_17472013.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
CER057]
gi|423497835|ref|ZP_17474452.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
CER074]
gi|423512580|ref|ZP_17489111.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA2-1]
gi|423519168|ref|ZP_17495649.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA2-4]
gi|423521632|ref|ZP_17498105.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA4-10]
gi|423557953|ref|ZP_17534255.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus MC67]
gi|423591540|ref|ZP_17567571.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD048]
gi|423598222|ref|ZP_17574222.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD078]
gi|423660693|ref|ZP_17635862.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM022]
gi|423670048|ref|ZP_17645077.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM034]
gi|423673748|ref|ZP_17648687.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM062]
gi|229807533|sp|A9VIU3.1|ENGB_BACWK RecName: Full=Probable GTP-binding protein EngB
gi|163864414|gb|ABY45473.1| small GTP-binding protein [Bacillus weihenstephanensis KBAB4]
gi|401080427|gb|EJP88715.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD142]
gi|401141615|gb|EJQ49169.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG5X1-1]
gi|401150641|gb|EJQ58097.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
CER057]
gi|401159525|gb|EJQ66908.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA2-4]
gi|401162315|gb|EJQ69673.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
CER074]
gi|401176880|gb|EJQ84073.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA4-10]
gi|401192159|gb|EJQ99177.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus MC67]
gi|401232908|gb|EJR39406.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD048]
gi|401237683|gb|EJR44134.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD078]
gi|401297705|gb|EJS03312.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM034]
gi|401301904|gb|EJS07490.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM022]
gi|401310355|gb|EJS15675.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VDM062]
gi|402431271|gb|EJV63340.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BtB2-4]
gi|402435199|gb|EJV67234.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG6O-2]
gi|402448502|gb|EJV80344.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
HuA2-1]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF R L +L++D P K
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH--PPWIMT 195
D+ ++L IP + TK DK+ P + ++++E ++
Sbjct: 122 DDIMMYDFLKHYEIPTIIIATKADKI-------PKGKWQKHLKVVKETLAVEIGDEIVLF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|209521070|ref|ZP_03269801.1| GTP-binding protein HSR1-related [Burkholderia sp. H160]
gi|209498489|gb|EDZ98613.1| GTP-binding protein HSR1-related [Burkholderia sp. H160]
Length = 220
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ E F + +D P + +PE A GRSN GKS+ IN L +K LA SK PG+TQ I
Sbjct: 5 LHESRFFTTVNHLRDLPANAQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHI 64
Query: 79 NHFLVNK----SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
N+F V K + Y+VDLPGYG+A+ P + W + Y +R L G++L++D+ P
Sbjct: 65 NYFSVGKADEPTAYLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDSRRP 124
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
++D W P+ + TKCDK+
Sbjct: 125 LTELDRRMIEWFAPTGKPIHTLLTKCDKL 153
>gi|156972896|ref|YP_001443803.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio harveyi ATCC
BAA-1116]
gi|156524490|gb|ABU69576.1| hypothetical protein VIBHAR_00574 [Vibrio harveyi ATCC BAA-1116]
Length = 223
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 76 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 135
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 136 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 191
Query: 204 DEL 206
D+L
Sbjct: 192 DQL 194
>gi|422006554|ref|ZP_16353543.1| GTP-binding protein YsxC [Providencia rettgeri Dmel1]
gi|414098770|gb|EKT60415.1| GTP-binding protein YsxC [Providencia rettgeri Dmel1]
Length = 203
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
+FV S+ + PKD E A GRSN GKSS +NAL ++K LA TSK PG+TQLIN F
Sbjct: 12 KFVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFE 71
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
V + +VDLPGYG+A+ P+ + W Y RE + G+++L+D P + +D+
Sbjct: 72 VEEGVRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHPLKDLDMQM 131
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
W N+P+ + TK DK+ A G R + I+ Q L
Sbjct: 132 IEWSVAMNVPVLVLLTKADKL--ASGARKKQLIEVRQAL 168
>gi|333906855|ref|YP_004480441.1| GTP-binding protein engB [Marinomonas posidonica IVIA-Po-181]
gi|333476861|gb|AEF53522.1| GTP-binding protein engB [Marinomonas posidonica IVIA-Po-181]
Length = 214
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 12 PYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKK 71
PY S + F+KS+ + CP D E A GRSN GKS+ +N L +K+LA TSK
Sbjct: 3 PY--DSTFQSAYFIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKT 60
Query: 72 PGKTQLINHFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLID 130
PG+TQLIN F +N ++DLPGYGFAK P + W + + Y +NR SL GV+L++D
Sbjct: 61 PGRTQLINCFGLNLDDRRLIDLPGYGFAKVPIEMKKVWQAHMQDYLMNRRSLAGVVLVMD 120
Query: 131 ASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP 190
P ++ D +W N + + + TK DK+K + +I+ ++L ++N
Sbjct: 121 IRHPLKEFDEMMLDWAKANGMKVHVLLTKSDKLKRGPAKSTMLSIQ--RELKQQNIDGSV 178
Query: 191 PWIMTSSVTGLGRDELLLHMSQ 212
S++ G G D+L + +++
Sbjct: 179 QTF--SALNGDGVDDLRIKLAE 198
>gi|431794976|ref|YP_007221881.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430785202|gb|AGA70485.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 210
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 7/202 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I++ EF+ S+ P+ PE A+ GRSNVGKSSLIN + +K LA T PGKTQ+I
Sbjct: 4 IRKAEFITSAVSVNGYPEGPEPEIALAGRSNVGKSSLINKFINRKNLARTGNTPGKTQMI 63
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + +N W VDLPGYG+AK + +W + YF R +L V+ ++D P
Sbjct: 64 NFYRINDEWGFVDLPGYGYAKVSKELKANWGKMMEEYFSRRGNLRAVIQVVDIRHIPSLE 123
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHHPPWIMTSS 197
D + +L +P+ V TK D K++KG+ K Q+ + N P I S+
Sbjct: 124 DEEMHGFLRNRGLPVLVVATKAD--KISKGQWG----KHLSQIAKALNIPDWRMIIPYSA 177
Query: 198 VTGLGRDELLLHMSQLRNYWDQ 219
TGLG EL + ++ D+
Sbjct: 178 ETGLGVPELHQALEEILAMTDE 199
>gi|291286241|ref|YP_003503057.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio
acetiphilus DSM 12809]
gi|290883401|gb|ADD67101.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio
acetiphilus DSM 12809]
Length = 190
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 80/143 (55%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ EF+ S+ K P+ + PE A GRSNVGKSS+IN L+ K+L K PGKT+L+N
Sbjct: 2 KAEFITSAKEPKGYPETEFPEIAFAGRSNVGKSSMINTLLGTKKLVKVGKTPGKTRLVNF 61
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
FLV+ +VDLPGYGFAK + W + YF R L +L++D P + DL
Sbjct: 62 FLVSDRIMLVDLPGYGFAKVSKAEKAQWGETIENYFTERTQLSACVLILDIRRDPNEDDL 121
Query: 141 DCANWLGRNNIPLTFVFTKCDKM 163
WL N+ TKCDK+
Sbjct: 122 GMLYWLQHYNVKALIALTKCDKL 144
>gi|375088365|ref|ZP_09734705.1| ribosome biogenesis GTP-binding protein YsxC [Dolosigranulum pigrum
ATCC 51524]
gi|374562403|gb|EHR33733.1| ribosome biogenesis GTP-binding protein YsxC [Dolosigranulum pigrum
ATCC 51524]
Length = 197
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 90/150 (60%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ + + S+ R + P + PE A+ GRSNVGKSS IN ++ +K+LA TS KPGKT+
Sbjct: 3 QVNYADILISAVRPEQYPDEGLPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTRT 62
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N F +N + VD+PGYG+AK R WS + YF RE L V+ ++D P +
Sbjct: 63 LNFFNINHDFLFVDVPGYGYAKVSKSEREKWSQMMEDYFSAREELSLVVQIVDFRHEPTE 122
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAK 167
+D+ +L ++P+ V TK DK+K ++
Sbjct: 123 LDIQMYEYLKYFDLPVLIVATKADKIKKSR 152
>gi|374334346|ref|YP_005091033.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
gi|372984033|gb|AEY00283.1| GTP-binding protein YsxC [Oceanimonas sp. GK1]
Length = 211
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P D E A GRSN GKSS +N + ++K LA TSK PG+TQLIN F +
Sbjct: 13 FITSAPNIRQMPADTGVEIAFAGRSNAGKSSALNTITQQKSLARTSKTPGRTQLINVFEL 72
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
++ ++DLPGYG+AK P+ ++ W Y R SL G+++L+D P + ID
Sbjct: 73 SEGKRLIDLPGYGYAKVPEEMKLKWQEALSEYLQQRTSLKGLVVLMDIRHPLKDIDQQLL 132
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT---SSVTG 200
W +P+ + TKCDK+K G R E ++ +RE I SS+ G
Sbjct: 133 QWASDCELPVLALLTKCDKLK--SGARKAEVLR-----VREAVAIFGGNIRVEAFSSLKG 185
Query: 201 LGRDE 205
LG D+
Sbjct: 186 LGVDQ 190
>gi|258646883|ref|ZP_05734352.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM
15470]
gi|260404322|gb|EEW97869.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM
15470]
Length = 211
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 99/180 (55%), Gaps = 18/180 (10%)
Query: 39 RPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVN-----------KSW 87
+ E A +GRSNVGKSSLIN+L ++LA S++PGKT+ IN++ V + W
Sbjct: 30 KKEIAFIGRSNVGKSSLINSLSGMRKLAYVSREPGKTRTINYYAVQSRRDTGSGEERQEW 89
Query: 88 YIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLG 147
Y+VDLPGYGFAK R WS F Y N E+LV V LL+D P IDL WL
Sbjct: 90 YLVDLPGYGFAKTSQANRDSWSGFIDEYIRNSENLVMVGLLVDLRHPGLPIDLKAYEWLK 149
Query: 148 RNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELL 207
+ L + TK DK +E K+ +++ + +P + SS++G GRD+LL
Sbjct: 150 KIAPGLQIIGTKADKTG------KNEMNKNL-RILEKTFPADTAPLAYSSLSGTGRDKLL 202
>gi|22537458|ref|NP_688309.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae 2603V/R]
gi|76787685|ref|YP_329952.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae A909]
gi|76798601|ref|ZP_00780829.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
gi|77406717|ref|ZP_00783756.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|77409175|ref|ZP_00785887.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|77411147|ref|ZP_00787499.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77414086|ref|ZP_00790255.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|339301299|ref|ZP_08650407.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae ATCC 13813]
gi|406709704|ref|YP_006764430.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae GD201008-001]
gi|421148137|ref|ZP_15607803.1| GTP-binding protein YsxC [Streptococcus agalactiae GB00112]
gi|424049234|ref|ZP_17786785.1| GTP-binding protein YsxC [Streptococcus agalactiae ZQ0910]
gi|81845418|sp|Q8DZ11.1|ENGB_STRA5 RecName: Full=Probable GTP-binding protein EngB
gi|119369268|sp|Q3K0K1.1|ENGB_STRA1 RecName: Full=Probable GTP-binding protein EngB
gi|22534336|gb|AAN00182.1|AE014252_5 GTP-binding protein [Streptococcus agalactiae 2603V/R]
gi|76562742|gb|ABA45326.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|76586035|gb|EAO62565.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
gi|77159884|gb|EAO71026.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|77162765|gb|EAO73724.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77172221|gb|EAO75378.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|77174680|gb|EAO77510.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|319745298|gb|EFV97616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae ATCC 13813]
gi|389649434|gb|EIM70916.1| GTP-binding protein YsxC [Streptococcus agalactiae ZQ0910]
gi|401685113|gb|EJS81127.1| GTP-binding protein YsxC [Streptococcus agalactiae GB00112]
gi|406650589|gb|AFS45990.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae GD201008-001]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 16 SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 75
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y + R++L V+ L+D P D+ +L
Sbjct: 76 LRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQMYEFL 135
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +IK + N+ +I+ SSV G DE
Sbjct: 136 KYYEIPVIIVATKADKIPRGKWNKHESSIKK-----KLNFDKKDHFIVFSSVDRTGLDE 189
>gi|388602774|ref|ZP_10161170.1| GTP-binding protein YsxC [Vibrio campbellii DS40M4]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|28896883|ref|NP_796488.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus RIMD 2210633]
gi|153838823|ref|ZP_01991490.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810]
gi|260365930|ref|ZP_05778424.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus K5030]
gi|260877782|ref|ZP_05890137.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AN-5034]
gi|260895568|ref|ZP_05904064.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus Peru-466]
gi|260902593|ref|ZP_05910988.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AQ4037]
gi|417320977|ref|ZP_12107517.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329]
gi|433656421|ref|YP_007273800.1| GTP-binding protein EngB [Vibrio parahaemolyticus BB22OP]
gi|31340058|sp|Q87TG0.1|ENGB_VIBPA RecName: Full=Probable GTP-binding protein EngB
gi|28805091|dbj|BAC58372.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747753|gb|EDM58649.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810]
gi|308088574|gb|EFO38269.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus Peru-466]
gi|308089816|gb|EFO39511.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AN-5034]
gi|308109669|gb|EFO47209.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus AQ4037]
gi|308113473|gb|EFO51013.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio
parahaemolyticus K5030]
gi|328471657|gb|EGF42534.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329]
gi|432507109|gb|AGB08626.1| GTP-binding protein EngB [Vibrio parahaemolyticus BB22OP]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|424034472|ref|ZP_17773877.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-01]
gi|408873075|gb|EKM12282.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-01]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|363897079|ref|ZP_09323619.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp.
ACB7]
gi|361959177|gb|EHL12470.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp.
ACB7]
Length = 211
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
I+ VE G PK RPEF + GRSNVGKSS INALV +K A TS PGKT+ I
Sbjct: 3 IRSVELPFVCGVKSTLPKTGRPEFVLAGRSNVGKSSFINALVERKSFARTSSTPGKTRTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + VN S+Y+VDLPGYG+AK V + W + Y + E + V+LL+DA P +
Sbjct: 63 NFYNVNDSFYLVDLPGYGYAKTGPVEQEKWDRMIRRYLESGEDIEEVVLLLDARRIPNEK 122
Query: 139 DLDCANW-LGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT-- 195
DL +W L V TK DK+K + E K+ ++ IR +M
Sbjct: 123 DLQMFSWILSTTGYEPIVVITKMDKLKRS------ERAKALKE-IRAKLGASKECMMIPF 175
Query: 196 SSVTGLGRDELL 207
SS T GR E L
Sbjct: 176 SSETKEGRIEFL 187
>gi|404369993|ref|ZP_10975320.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
7_2_43FAA]
gi|226913876|gb|EEH99077.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
7_2_43FAA]
Length = 201
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 6/191 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK +FV S+ + + P PE A +GRSNVGKSS+INAL +K+LA S+ PGKT+L
Sbjct: 3 KIKNSDFVISAVKKEQYPITGLPEIAFVGRSNVGKSSIINALTNRKKLAKVSQTPGKTRL 62
Query: 78 INHFLVN-KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
IN F++N +Y+VDLPGYG+AK + W + Y R+ L V+LL+D+ P
Sbjct: 63 INFFIINGDEFYLVDLPGYGYAKVSKTEKASWGKTIETYLNGRQELKRVVLLVDSRHKPT 122
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
D+ W+ + TK DK+ + R+ ++ I+ L +E+ + S
Sbjct: 123 ADDIQMHEWIKFYGYDEVVIATKSDKLSNNELRKSEKVIRETLNLGKEDKLY-----FFS 177
Query: 197 SVTGLGRDELL 207
S+ G+DEL+
Sbjct: 178 SLNKKGKDELV 188
>gi|307706171|ref|ZP_07642989.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618431|gb|EFN97580.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 195
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVNKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|406658488|ref|ZP_11066628.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus iniae
9117]
gi|405578703|gb|EKB52817.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus iniae
9117]
Length = 199
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANQSHYPQDELPEIAMAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y R++L V+ L+D P K D+ +L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTGRDNLRAVVSLVDFRHEPSKEDIQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + IK +E+ +I+ SSV +G DE
Sbjct: 137 KYYEIPVIIVATKADKIPRGKWNKHESMIKKSLDFNKED-----NFIIFSSVDRIGIDE 190
>gi|290477053|ref|YP_003469965.1| GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus bovienii
SS-2004]
gi|289176398|emb|CBJ83205.1| putative GTPase with nucleoside triP hydrolase domain, involved in
coordination of cell cycle [Xenorhabdus bovienii
SS-2004]
Length = 207
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
FV S+ + P+D E A GRSN GKSS +NAL ++K LA TSK PG+TQLIN F V
Sbjct: 13 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+VDLPGYG+A+ P+ + W + Y RE L+G+++L+D P + +D+
Sbjct: 73 EDGIRLVDLPGYGYAEVPEEMKRKWQNALGEYLQKRECLLGLVVLMDIRHPLKDLDMQMI 132
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
W +P+ + TK DK+ A G R + K Q+L
Sbjct: 133 EWAVVMQVPVMVLLTKADKL--ASGARKSQLAKVRQEL 168
>gi|421312395|ref|ZP_15762997.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58981]
gi|395909249|gb|EJH20125.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
pneumoniae GA58981]
Length = 195
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESVIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|153833801|ref|ZP_01986468.1| GTP-binding protein [Vibrio harveyi HY01]
gi|444424782|ref|ZP_21220234.1| GTP-binding protein YsxC [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|148869859|gb|EDL68827.1| GTP-binding protein [Vibrio harveyi HY01]
gi|444241905|gb|ELU53423.1| GTP-binding protein YsxC [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|424042399|ref|ZP_17780122.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-02]
gi|408889640|gb|EKM28007.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae
HENC-02]
Length = 219
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVSVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|345864937|ref|ZP_08817132.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124017|gb|EGW53902.1| putative GTP-binding protein EngB [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 201
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
F+KS+ + P D E A GRSN GKSS +N L +K LA TSK PG+TQL+N F
Sbjct: 8 ARFLKSAAKLSQAPADQGIEVAFAGRSNAGKSSALNLLCNQKSLARTSKTPGRTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
+++ +VDLPGYG+AK + + W S Y RE L G++L++D P +K D+
Sbjct: 68 GLDEQRRLVDLPGYGYAKVAEQVKTIWQSALADYIAQRECLRGLILMMDVRHPLKKFDIQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE 184
W + +P + TK DK+K +R ++S Q+ + E
Sbjct: 128 MLEWNIHHGLPTHILLTKADKLKPGAAQR---TLRSVQEELAE 167
>gi|433455222|ref|ZP_20413315.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma sp. G5847]
gi|431933089|gb|ELK19721.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma sp. G5847]
Length = 196
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK+ F+ S+ + DD E ++GRSNVGKSS IN+L +LA S PGKT+L+
Sbjct: 2 IKQASFITSASNKSNWIDDDISEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLL 61
Query: 79 NHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F +NK Y +VD PGYG+AK D ++ ++ + YF+NR++L GV LL+D P
Sbjct: 62 NFFDINKGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
D+ +L NIP+ + TK DK+K ++ + ++ IK +E+
Sbjct: 122 DDVMMYQFLKHYNIPVVIIGTKLDKLKKSEYVKNEKIIKETINFYKED 169
>gi|375264130|ref|YP_005021573.1| GTP-binding protein YsxC [Vibrio sp. EJY3]
gi|369839454|gb|AEX20598.1| GTP-binding protein YsxC [Vibrio sp. EJY3]
Length = 219
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 4/183 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+ +IVDLPGYGFA+ P + W Y RE L G+++L+D P + +D
Sbjct: 72 EEGCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQMI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
W + IP+ + TK DK+K G R +K +Q+ E + + SS+ GLG
Sbjct: 132 FWAIDSRIPVQVLLTKADKLK--SGARKQTLLKIRKQV--ETFGGDVDVDVFSSLKGLGV 187
Query: 204 DEL 206
D+L
Sbjct: 188 DQL 190
>gi|298714913|emb|CBJ27669.1| YihA4, YihA/EngB-like GTPase [Ectocarpus siliculosus]
Length = 677
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 10/199 (5%)
Query: 13 YAGHSQIKEVEFVKSSGRAKDCPKDD-RPEFAILGRSNVGKSSLINALVRKKELALTSKK 71
+ ++ ++ V+FVK + PK+ PE A +GRSNVGKSSLIN + +K LA TSK+
Sbjct: 408 WLANAAVRGVDFVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKR 467
Query: 72 PGKTQLINHFLVN----KSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLL 127
PGKTQ N+FL+N ++Y+VDLPG G+AK P+ R +WS+ + Y R SL +
Sbjct: 468 PGKTQQFNYFLMNNNTENAFYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFH 527
Query: 128 LIDASVPPQKIDLDCANWLGR--NNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIREN 185
LID P D + + V TK DK + R+ E + + +RE
Sbjct: 528 LIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVA---ALREA 584
Query: 186 YPHHPPWIMTSSVTGLGRD 204
P ++TS+ + LGRD
Sbjct: 585 GVSRTPVVLTSAASKLGRD 603
>gi|294675900|ref|YP_003576515.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003]
gi|294474720|gb|ADE84108.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003]
Length = 216
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+V F+K P DR E GRSNVGKSSLINAL +K LA S PG+TQ IN
Sbjct: 26 QVLFLKGVVAMAGLPPADRIEVCFAGRSNVGKSSLINALTGRKNLARASNTPGRTQEINF 85
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F Y+VDLPGYGFA+AP W + K Y R +L +LIDA + +D
Sbjct: 86 FTTEGGPYLVDLPGYGFAEAPVAIVKKWQALLKSYLSGRATLRRAFVLIDARHGVKAVDE 145
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L R+ + V TK DK+ A+ R E +K + ++ +P ++TSS G
Sbjct: 146 EILQLLDRSAVTFQAVLTKADKISKAELERVIEQVKG---ALAKHPAAYPEIVVTSSEKG 202
Query: 201 LGRDEL 206
G + L
Sbjct: 203 EGIETL 208
>gi|421276985|ref|ZP_15727805.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
gi|395876266|gb|EJG87342.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
SPAR10]
Length = 195
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|429205400|ref|ZP_19196677.1| GTP-binding protein engB [Lactobacillus saerimneri 30a]
gi|428146472|gb|EKW98711.1| GTP-binding protein engB [Lactobacillus saerimneri 30a]
Length = 196
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
Q+ V S+ R PKD PE A GRSNVGKSSL N L+ ++ A TS +PGKTQ
Sbjct: 2 QVNNVNLRISAVRPDQYPKDGFPEVAFAGRSNVGKSSLTNVLINRRNYARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + + VD+PGYG+AK R W+ + YF R+ L GV+ L+DA P K
Sbjct: 62 LNFYDIESKLFFVDVPGYGYAKVSQKEREKWARMIETYFSERQPLRGVVTLVDARHEPTK 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
+D ++L ++PL V TK D KV K RR
Sbjct: 122 LDKQMVDFLHYYDLPLLVVGTKVD--KVPKSRR 152
>gi|417005637|ref|ZP_11944230.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae FSL S3-026]
gi|341577450|gb|EGS27858.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
agalactiae FSL S3-026]
Length = 198
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N + ++
Sbjct: 16 SASNKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDDK 75
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y + R++L V+ L+D P D+ +L
Sbjct: 76 LRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQMYEFL 135
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +IK + N+ +I+ SSV G DE
Sbjct: 136 KYYEIPVIIVATKADKIPRGKWNKHESSIKK-----KLNFDKKDHFIVFSSVDRTGLDE 189
>gi|30022557|ref|NP_834188.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus ATCC
14579]
gi|206969843|ref|ZP_03230797.1| GTP-binding protein [Bacillus cereus AH1134]
gi|218232512|ref|YP_002369276.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
B4264]
gi|296504960|ref|YP_003666660.1| GTPase EngB [Bacillus thuringiensis BMB171]
gi|365158737|ref|ZP_09354929.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp.
7_6_55CFAA_CT2]
gi|423411736|ref|ZP_17388856.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3O-2]
gi|423426606|ref|ZP_17403637.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-2]
gi|423432478|ref|ZP_17409482.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4O-1]
gi|423437915|ref|ZP_17414896.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X12-1]
gi|423502844|ref|ZP_17479436.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus HD73]
gi|423582677|ref|ZP_17558788.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD014]
gi|423585054|ref|ZP_17561141.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD045]
gi|423631192|ref|ZP_17606939.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD154]
gi|423634658|ref|ZP_17610311.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD156]
gi|423640452|ref|ZP_17616070.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD166]
gi|423650375|ref|ZP_17625945.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD169]
gi|423657421|ref|ZP_17632720.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD200]
gi|449091434|ref|YP_007423875.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|81837282|sp|Q817Q5.1|ENGB_BACCR RecName: Full=Probable GTP-binding protein EngB
gi|226741191|sp|B7HEA1.1|ENGB_BACC4 RecName: Full=Probable GTP-binding protein EngB
gi|29898115|gb|AAP11389.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|206735531|gb|EDZ52699.1| GTP-binding protein [Bacillus cereus AH1134]
gi|218160469|gb|ACK60461.1| GTP-binding protein [Bacillus cereus B4264]
gi|296326012|gb|ADH08940.1| GTPase EngB [Bacillus thuringiensis BMB171]
gi|363626610|gb|EHL77593.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp.
7_6_55CFAA_CT2]
gi|401104602|gb|EJQ12575.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3O-2]
gi|401110522|gb|EJQ18426.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG3X2-2]
gi|401116085|gb|EJQ23928.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4O-1]
gi|401119898|gb|EJQ27703.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
BAG4X12-1]
gi|401211492|gb|EJR18239.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD014]
gi|401234366|gb|EJR40847.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD045]
gi|401264081|gb|EJR70194.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD154]
gi|401280637|gb|EJR86557.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD156]
gi|401280947|gb|EJR86863.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD166]
gi|401282273|gb|EJR88176.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD169]
gi|401289316|gb|EJR95033.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus
VD200]
gi|402459809|gb|EJV91540.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus HD73]
gi|449025191|gb|AGE80354.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 198
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + + V S+ + + P D PE A+ GRSNVGKSS IN ++ +K+L S KPGKTQ
Sbjct: 2 KVTKADIVISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N FL+N+ + VD+PGYG+AK R W + YF RE L +L++D P
Sbjct: 62 LNFFLINEMMHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTS 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHH--PPWIMT 195
D+ ++L IP + TK DK+ P + ++++E ++
Sbjct: 122 DDVMMYDFLKHYEIPTIIIATKADKI-------PKGKWQKHLKVVKETLAVEIGDEIVLF 174
Query: 196 SSVTGLGRDE 205
SS TGLG++E
Sbjct: 175 SSETGLGKEE 184
>gi|284047886|ref|YP_003398225.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus
fermentans DSM 20731]
gi|283952107|gb|ADB46910.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus
fermentans DSM 20731]
Length = 209
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
+V S+ +A P+D E A +GRSNVGKSSL+N+L R+K LA S PGKTQ IN +
Sbjct: 13 YVASAVKATQYPQDTIDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYSF 72
Query: 84 NK-----------SWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
++Y VDLPGYGFA+ + WS+F Y N + L V +L+D
Sbjct: 73 QAKRQLEDEPERHTYYAVDLPGYGFARTSKGNKEQWSAFICKYMENSQYLKLVCVLMDIR 132
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
P + D+DC WL +P+ + TK DK+ +KG + S + L ++ +
Sbjct: 133 HAPMESDIDCYQWLLNLGLPIMVILTKSDKL--SKG-----AVASQKALYKKTFGLRDEQ 185
Query: 193 IMT-SSVTGLGRDELL 207
IMT SS + R EL+
Sbjct: 186 IMTYSSTSHTTRKELI 201
>gi|262373530|ref|ZP_06066808.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii
SH205]
gi|262311283|gb|EEY92369.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii
SH205]
Length = 258
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 5/199 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+++ EF+ S+ + C +D E A GRSN GKSS INAL KK+LA SK+PG+TQ+I
Sbjct: 41 LRQAEFLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKRPGRTQMI 100
Query: 79 NHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F L N +VDLPGYG+A P+ ++ W + Y ++R+SL G++LL+D P Q
Sbjct: 101 NFFSLGNPDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIHRKSLQGLVLLMDIRHPLQH 160
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
DL W ++ + + TK DK+ + ++K + ++ ++ + SS
Sbjct: 161 FDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDFSIQ----LFSS 216
Query: 198 VTGLGRDELLLHMSQLRNY 216
+ +G +EL M NY
Sbjct: 217 LNRIGLEELASVMGGRLNY 235
>gi|121999169|ref|YP_001003956.1| HSR1-like GTP-binding protein [Halorhodospira halophila SL1]
gi|121590574|gb|ABM63154.1| cell division checkpoint GTPase YihA [Halorhodospira halophila SL1]
Length = 206
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ +F S+ D D+ E A GRSNVGKSS++NAL +++LA TS PG+TQ IN
Sbjct: 8 RRAQFRLSAPTPADLGPDEGVEVAFAGRSNVGKSSVLNALTGQRKLARTSGTPGRTQAIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++++ ++DLPGYG+AK P + W Y NR+SL GV++++D P +D
Sbjct: 68 CFDLDETRRLIDLPGYGYAKVPQAVKRRWERALPDYLRNRQSLYGVVVIMDVRHAPTDLD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
L W + L V TK DK+K +++ Q+ E+ P + S++
Sbjct: 128 LQMLRWCADAGLVLHGVLTKADKLKRGAAH---NRLQAVQRATAEDGVTLPSVQLFSALK 184
Query: 200 GLGRDEL 206
G G DEL
Sbjct: 185 GEGIDEL 191
>gi|418974480|ref|ZP_13522390.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK1074]
gi|383348907|gb|EID26859.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK1074]
Length = 195
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDLSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|322385236|ref|ZP_08058883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|417921721|ref|ZP_12565211.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|321270860|gb|EFX53773.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
gi|342833606|gb|EGU67886.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
cristatus ATCC 51100]
Length = 195
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+DD PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y +R++L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRDNLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + ++ +I+ SSV
Sbjct: 128 MYEFLKYYEIPVIVVATKADKIPRGKWNKHESAIKK-----KLDFDKTDDFIIFSSVDKT 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GLDQ 186
>gi|302671760|ref|YP_003831720.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302396233|gb|ADL35138.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 200
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 83/152 (54%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P + PEFA G+SNVGKSSLIN ++ +K A TS++PGKTQ I
Sbjct: 3 IKNVNLETVCGITSTLPDNIHPEFAFAGKSNVGKSSLINGIMNRKNYARTSQEPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N +Y+VDLPGYGFA+ P+ + W + Y L+ V LLID P
Sbjct: 63 NYYNINDEFYLVDLPGYGFARVPEKVKEQWGKMIENYLHTSRQLLRVFLLIDIRHEPSAN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
D+ W+ + TK DK+K ++ +
Sbjct: 123 DVQMYKWIVHQGFQPVIIATKSDKIKKSQHEK 154
>gi|212711547|ref|ZP_03319675.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM
30120]
gi|422020129|ref|ZP_16366669.1| GTP-binding protein YsxC [Providencia alcalifaciens Dmel2]
gi|212685649|gb|EEB45177.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM
30120]
gi|414101724|gb|EKT63321.1| GTP-binding protein YsxC [Providencia alcalifaciens Dmel2]
Length = 206
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+FV S+ + PKD E A GRSN GKSS +NAL ++K LA TSK PG+TQLIN F
Sbjct: 11 TKFVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLF 70
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
V + +VDLPGYG+A+ P+ + W Y RE + G+++L+D P + +D+
Sbjct: 71 EVEEGIRLVDLPGYGYAEVPEDMKRKWQQALGEYLQKRECIKGLVILMDIRHPLKDLDMQ 130
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
W NIP+ + TK DK+ A G R + ++ Q L
Sbjct: 131 MIEWSVAMNIPVLVLLTKADKL--ASGARKKQLMEVRQAL 168
>gi|444376049|ref|ZP_21175298.1| GTP-binding protein EngB [Enterovibrio sp. AK16]
gi|443679820|gb|ELT86471.1| GTP-binding protein EngB [Enterovibrio sp. AK16]
Length = 218
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 10/190 (5%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ F+ S+ + P D E A GRSN GKSS IN L +K L TSK PG+TQLIN
Sbjct: 8 RNTHFITSAPDIRALPHDTGIEIAFAGRSNAGKSSSINRLCDQKSLVKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V++ +IVDLPGYG+A+ P ++ W Y R L G+++L+D P +++D
Sbjct: 68 LFKVDEGCHIVDLPGYGYAQVPLEMKLKWQKSLGEYLQKRNQLKGLVVLMDIRHPLKELD 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE---NYPHHPPWIMTS 196
D W +N+P+ + TKCDK+K G R E +K +RE ++ + S
Sbjct: 128 QDLIFWAVDSNLPVLALLTKCDKLK--SGARKAELLK-----VREAAKDFGGDVEVELYS 180
Query: 197 SVTGLGRDEL 206
S+ G+G D+L
Sbjct: 181 SLKGIGVDKL 190
>gi|317497643|ref|ZP_07955959.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae
bacterium 5_1_63FAA]
gi|291559839|emb|CBL38639.1| ribosome biogenesis GTP-binding protein YsxC/EngB
[butyrate-producing bacterium SSC/2]
gi|316895074|gb|EFV17240.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae
bacterium 5_1_63FAA]
Length = 200
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P + PE A G+SNVGKSSLINAL+ +K A S +PGKTQ I
Sbjct: 3 IKSVNLETVCGITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTI 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N+ Y VDLPGYGFAK + W + Y + L V LLID P K
Sbjct: 63 NYYNINEELYYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKN 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ N + TK DK+K ++ + + I++ Q+ +E P S++
Sbjct: 123 DVMMYDWILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKET-----PIFPFSAL 177
Query: 199 TGLGRDEL 206
+ GRDE+
Sbjct: 178 SKQGRDEI 185
>gi|406669484|ref|ZP_11076754.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
gi|405583180|gb|EKB57148.1| ribosome biogenesis GTP-binding protein YsxC [Facklamia ignava CCUG
37419]
Length = 194
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 3/161 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+E + S+ P + PE A+ GRSNVGKSS INA+V ++ +A TS +PGKTQ +N +
Sbjct: 6 IEMLTSAVSPAQYPAPNLPEIALAGRSNVGKSSFINAMVGRQGVARTSSQPGKTQTLNFY 65
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ + VDLPGYG+A+ R ++ F Y RE+LV +LLL+D PP +DL
Sbjct: 66 EIDHQFRFVDLPGYGYARVSKRERERFNQFISDYLHQRENLVALLLLMDFRHPPTVLDLG 125
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLI 182
+ IP V TK DK+K ++ + +I SF QL+
Sbjct: 126 MKEFADELEIPYAIVTTKIDKIKRSQYSK---HIHSFVQLL 163
>gi|349700018|ref|ZP_08901647.1| GTP-binding protein YsxC [Gluconacetobacter europaeus LMG 18494]
Length = 221
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E FV + + P PE A GRSNVGKSSLINAL ++ LA S +PG+T+ +N
Sbjct: 28 EFRFVFGAQQLGQLPDPVLPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNF 87
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F + +VD+PGYGFAKA + DW Y R +L V+LL+D+ V + D
Sbjct: 88 FELADRLTLVDMPGYGFAKAAKAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVEVKATDQ 147
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
+ L R + V TKCD V K + ++ ++ + P + TSS TG
Sbjct: 148 EIMKLLDRAAVTFQVVLTKCD---VPKPAMLEAKMREVTAIVATHAAAFPDVLATSSETG 204
Query: 201 LGRDELLLHMSQLRN 215
G EL +++L N
Sbjct: 205 EGIAELRAELARLAN 219
>gi|347525526|ref|YP_004832274.1| GTP-binding protein [Lactobacillus ruminis ATCC 27782]
gi|345284485|gb|AEN78338.1| GTP-binding protein [Lactobacillus ruminis ATCC 27782]
Length = 198
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++ VE S+ P + PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ
Sbjct: 2 KVQNVELTISAVSPAQYPNEGFPEIALSGRSNVGKSSLINTLINRKGLARTSSQPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W + YF +R L GV+ L+D P +
Sbjct: 62 LNFYNIESELYFVDVPGYGYAKVSKKDREKWGQMIERYFSDRPVLRGVISLVDGRHEPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D ++L ++P+ TK DK+ K R + I+ L ++ ++ SS
Sbjct: 122 LDCQMIDFLHYYDLPILVCATKMDKIPRGKWNRTESQIRKKLALNPQD-----EIVLFSS 176
Query: 198 VTGLGRDEL 206
VT G++E+
Sbjct: 177 VTKAGKEEV 185
>gi|59710682|ref|YP_203458.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri
ES114]
gi|423684811|ref|ZP_17659619.1| GTP-binding protein YsxC [Vibrio fischeri SR5]
gi|75431909|sp|Q5E8S6.1|ENGB_VIBF1 RecName: Full=Probable GTP-binding protein EngB
gi|59478783|gb|AAW84570.1| cell division GTPase YihA [Vibrio fischeri ES114]
gi|371495858|gb|EHN71452.1| GTP-binding protein YsxC [Vibrio fischeri SR5]
Length = 215
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QKTHFITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V ++ +IVDLPGYGFA+ P + W Y R+ L G+++L+D P + ID
Sbjct: 68 LFKVEENCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHPLKDID 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W NIP+ + TK DK+K G R + +K + + ++ SS+
Sbjct: 128 QQLVFWAVDQNIPVQILLTKADKLK--SGARKAQVLKVREAAV--DFGGEVEVDAFSSLK 183
Query: 200 GLGRDEL 206
G+G D+L
Sbjct: 184 GIGVDKL 190
>gi|299822780|ref|ZP_07054666.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM
20601]
gi|299816309|gb|EFI83547.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM
20601]
Length = 195
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ VE V S+ + P+ PEFA+ GRSNVGKSS IN ++ +K +A S KPGKTQ +
Sbjct: 3 VNNVELVISAVWQEQYPEGGLPEFALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + + + + VD+PGYGFAK R W + Y +RE L V+ +ID P K
Sbjct: 63 NFYNIEDTLFFVDVPGYGFAKVSKKEREKWGEMIETYITSREPLRAVVQIIDLRHKPTKD 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +L +IP+ + TK DK+ +K + N K ++ + ++ + ++ SS
Sbjct: 123 DVMMYEFLKYYDIPVIIIATKADKIPRSKWYK---NAKVVKETL--DFDANDKLVLFSSE 177
Query: 199 TGLGRDELLLHMSQLRN 215
T +G++E H+ N
Sbjct: 178 TKMGKEEAWQHIESFLN 194
>gi|344941872|ref|ZP_08781160.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
gi|344263064|gb|EGW23335.1| GTP-binding protein engB [Methylobacter tundripaludum SV96]
Length = 210
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 4/199 (2%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ +F+ SS + P D E A GRSN GKSS IN L R+ LA SK PG+TQ++N
Sbjct: 7 QAKFINSSPHLSNTPPDQGLEVAFAGRSNAGKSSAINTLTRQNGLARISKTPGRTQMLNF 66
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F +N+ VDLPGYG+AK P + W + Y +R+SL ++L++D P + D
Sbjct: 67 FEINERQRFVDLPGYGYAKVPLEVKKKWHELMETYLTSRKSLCAIILVMDVRHPLTEFDW 126
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTG 200
W +PL + TK DK+ + ++ ++L N+P + SS+
Sbjct: 127 QMVEWCEHTRLPLHILLTKADKLNYGAAKNTLLQVQ--KELKDSNFP--LTIQLFSSLKK 182
Query: 201 LGRDELLLHMSQLRNYWDQ 219
G DE+ + QL + DQ
Sbjct: 183 TGIDEVHAALDQLFHPVDQ 201
>gi|225870477|ref|YP_002746424.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi
subsp. equi 4047]
gi|254783210|sp|C0MA50.1|ENGB_STRE4 RecName: Full=Probable GTP-binding protein EngB
gi|225699881|emb|CAW93776.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 199
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F V+
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
+VD+PGYG+AK R W + Y R++L V+ L+D + D+ +L
Sbjct: 77 LRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHESSQDDIQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ + + + +K N+ +I+ SSV +G DE
Sbjct: 137 KYYEIPVIIVATKADKVPRGRWNKHESMVKK-----SLNFDQTDAFIIFSSVERIGIDE 190
>gi|197333942|ref|YP_002154844.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11]
gi|238690290|sp|B5FFA6.1|ENGB_VIBFM RecName: Full=Probable GTP-binding protein EngB
gi|197315432|gb|ACH64879.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11]
Length = 215
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ + P+D+ E A GRSN GKSS +N L +K LA TSK PG+TQLIN
Sbjct: 8 QKTHFITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLIN 67
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F V ++ +IVDLPGYGFA+ P + W Y R+ L G+++L+D P + ID
Sbjct: 68 LFKVEENCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHPLKDID 127
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
W NIP+ + TK DK+K G R + +K + + ++ SS+
Sbjct: 128 QQLVFWAVDQNIPVQILLTKADKLK--SGARKAQVLKVREAAV--DFGGEVEVDAFSSLK 183
Query: 200 GLGRDEL 206
G+G D+L
Sbjct: 184 GIGVDKL 190
>gi|329848428|ref|ZP_08263456.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis
biprosthecum C19]
gi|328843491|gb|EGF93060.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis
biprosthecum C19]
Length = 215
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
+ FV + + + P +PE A GRSNVGKSSLINA+V K LA S +PG+T+ +N
Sbjct: 20 RAATFVMGAAKVEQLPDTSQPEVAFAGRSNVGKSSLINAVVGMKALARASNEPGRTREVN 79
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F VN ++VDLPGYG+AKA VT + + + Y R +L LLIDA +++D
Sbjct: 80 FFNVNGQLHLVDLPGYGWAKASKVTVKKFQNLGRDYLRGRPNLKRAYLLIDARHGLKEVD 139
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
+ + L + V TK DK+K A+ + I++ Q +++ HP + TSS T
Sbjct: 140 KEPMDALDVAAVSYQIVLTKADKIKPAELAKV---IEATQAGVKKRPAAHPLVLATSSET 196
Query: 200 GLGRDEL 206
G G EL
Sbjct: 197 GFGIAEL 203
>gi|293365854|ref|ZP_06612559.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
ATCC 35037]
gi|307703277|ref|ZP_07640222.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|358464448|ref|ZP_09174412.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 058 str. F0407]
gi|406576874|ref|ZP_11052498.1| GTP-binding protein YsxC [Streptococcus sp. GMD6S]
gi|406586803|ref|ZP_11061726.1| GTP-binding protein YsxC [Streptococcus sp. GMD1S]
gi|417934262|ref|ZP_12577582.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. F0392]
gi|419778662|ref|ZP_14304549.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK10]
gi|419783473|ref|ZP_14309259.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK610]
gi|419813951|ref|ZP_14338758.1| GTP-binding protein YsxC [Streptococcus sp. GMD2S]
gi|291315678|gb|EFE56126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
ATCC 35037]
gi|307623143|gb|EFO02135.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|340770832|gb|EGR93347.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis
bv. 2 str. F0392]
gi|357066848|gb|EHI76981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp.
oral taxon 058 str. F0407]
gi|383182144|gb|EIC74704.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK610]
gi|383187084|gb|EIC79543.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK10]
gi|404460677|gb|EKA06925.1| GTP-binding protein YsxC [Streptococcus sp. GMD6S]
gi|404472396|gb|EKA16822.1| GTP-binding protein YsxC [Streptococcus sp. GMD2S]
gi|404473742|gb|EKA18070.1| GTP-binding protein YsxC [Streptococcus sp. GMD1S]
Length = 195
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|397905709|ref|ZP_10506551.1| GTP-binding protein EngB [Caloramator australicus RC3]
gi|397161228|emb|CCJ33886.1| GTP-binding protein EngB [Caloramator australicus RC3]
Length = 193
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ E K + P RPE A+ GRSNVGKSSLIN LV K LA TS PGKT+
Sbjct: 2 KIKKAELEKVAVFPYQYPNTGRPEIALAGRSNVGKSSLINTLVNIKSLARTSSSPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN F +N S+Y+VDLPGYG+AK + W + Y RE L + LL+D+ P +
Sbjct: 62 INFFNINDSFYLVDLPGYGYAKVSKEEKKKWGKMIEDYLNGREELKLIALLVDSRHAPTE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D N++ + L + TK DK+ ++ + +K QL ++Y +I SS
Sbjct: 122 DDKLMLNFIRHSGKKLVVIATKIDKLSRSELIKNINMLKRELQLTDQDY-----FIPFSS 176
Query: 198 VTGLGRDEL 206
+ +G++EL
Sbjct: 177 LKKIGKEEL 185
>gi|359428639|ref|ZP_09219669.1| GTP-binding protein EngB [Acinetobacter sp. NBRC 100985]
gi|358235825|dbj|GAB01208.1| GTP-binding protein EngB [Acinetobacter sp. NBRC 100985]
Length = 258
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+++ EF+ S+ + C +D E A GRSN GKSS INAL +K+LA SKKPG+TQ+I
Sbjct: 41 LRQAEFLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMI 100
Query: 79 NHF-LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
N F L N +VDLPGYG+A P+ ++ W + Y ++R+SL G++LL+D P Q
Sbjct: 101 NFFSLGNPDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIHRKSLQGLVLLMDIRHPLQH 160
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM 163
DL W ++ + + TK DK+
Sbjct: 161 FDLMMLEWAHSRHLFVHILLTKADKL 186
>gi|357030894|ref|ZP_09092838.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
morbifer G707]
gi|356415588|gb|EHH69231.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter
morbifer G707]
Length = 226
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 13 YAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKP 72
+AG Q F S P RPE A GRSNVGKSSLINAL ++ LA S +P
Sbjct: 20 FAGDCQ-----FFFGSQTIDQLPPVGRPEVAFAGRSNVGKSSLINALTNRRALARASSEP 74
Query: 73 GKTQLINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDAS 132
G+T+ +N F + +VD+PGYGFAKA + DW Y R +L V+LL+DA
Sbjct: 75 GRTKQLNFFNLADRLTLVDMPGYGFAKASKSVKEDWQGMMFAYLRGRTTLSRVILLLDAR 134
Query: 133 VPPQKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRP---DENIKSFQQLIRENYPHH 189
+ +K D + L R + V TKCD++ RP + + L ++ +
Sbjct: 135 IELKKSDREVMELLDRAAVVFQIVLTKCDQV------RPKALEARTAEVEALALKHAAAY 188
Query: 190 PPWIMTSSVTGLGRDELLLHMSQL 213
P + TSS TG G ++L +++
Sbjct: 189 PRIVCTSSETGEGIEDLRAEIARF 212
>gi|323339571|ref|ZP_08079845.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis
ATCC 25644]
gi|417973888|ref|ZP_12614722.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|323092966|gb|EFZ35564.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis
ATCC 25644]
gi|346329759|gb|EGX98044.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
Length = 202
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+++ VE S+ P + PE A+ GRSNVGKSSLIN L+ +K LA TS +PGKTQ
Sbjct: 6 KVQNVELTISAVSPAQYPNEGFPEIALSGRSNVGKSSLINTLINRKGLARTSSQPGKTQT 65
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N + + Y VD+PGYG+AK R W + YF +R L GV+ L+D P +
Sbjct: 66 LNFYNIESELYFVDVPGYGYAKVSKKDREKWGQMIERYFSDRPVLRGVISLVDGRHEPTE 125
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
+D ++L ++P+ TK DK+ K R + I+ L ++ ++ SS
Sbjct: 126 LDCQMIDFLHYYDLPILVCATKMDKIPRGKWNRTESQIRKKLALNPQD-----EIVLFSS 180
Query: 198 VTGLGRDEL 206
VT G++E+
Sbjct: 181 VTKAGKEEV 189
>gi|312865357|ref|ZP_07725585.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei
F0415]
gi|311099468|gb|EFQ57684.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei
F0415]
Length = 199
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 5/178 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN L+ +K+LA TS KPGKTQL+N + ++
Sbjct: 17 SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLNRKKLARTSSKPGKTQLLNFYNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y + R++L V+ L+D P D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTADDVQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRD 204
IP+ V TK DK+ K + + IK + N+ +I+ SS T G D
Sbjct: 137 KYYGIPVIIVATKADKVPRGKWNKQESLIKK-----KLNFDKQDSFIVFSSETKEGYD 189
>gi|452975368|gb|EME75187.1| GTP-binding protein YsxC [Bacillus sonorensis L12]
Length = 195
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P +
Sbjct: 62 LNFYIINDVLHFVDVPGYGFAKVSKSEREAWGRMIETYLTLREELKAVVQIVDLRHAPSE 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKM------KVAKGRRPDENIKSFQQLIRENYPHHPP 191
D+ ++L IP+ + TK DK+ K AK R NI+ QL
Sbjct: 122 DDVMMYDFLKHYGIPVIVIATKADKIPKGKWEKHAKVVRQTLNIEQGDQL---------- 171
Query: 192 WIMTSSVTGLGRDELLLHMSQLRN 215
I+ SS T G+ E + Q+ N
Sbjct: 172 -ILFSSETKKGKQEAWAAIEQMIN 194
>gi|421488730|ref|ZP_15936118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK304]
gi|400367947|gb|EJP20962.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK304]
Length = 195
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|74316206|ref|YP_313946.1| cell division checkpoint GTPase YihA [Thiobacillus denitrificans
ATCC 25259]
gi|119369277|sp|Q3SMA6.1|ENGB_THIDA RecName: Full=Probable GTP-binding protein EngB
gi|74055701|gb|AAZ96141.1| GTP-binding [Thiobacillus denitrificans ATCC 25259]
Length = 206
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ F S + +D P R E A GRSN GKSS IN L RK LA TSK PG+TQLI
Sbjct: 7 LNRAHFFTSVAQFRDLP-PSRAEVAFAGRSNAGKSSAINLLTRKNRLAFTSKTPGRTQLI 65
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F + Y+VDLPGYG+AK P + W Y RE+L G++L++DA P +
Sbjct: 66 NFFELTADTYLVDLPGYGYAKVPPEVKAKWEGLLSRYLQEREALAGMVLIMDARHPLTPL 125
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKM 163
D W P+ + +K DK+
Sbjct: 126 DRQMLEWFAPTGKPVHILLSKADKL 150
>gi|392428602|ref|YP_006469613.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|419777242|ref|ZP_14303159.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
intermedius SK54]
gi|423068412|ref|ZP_17057200.1| GTP-binding protein engB [Streptococcus intermedius F0395]
gi|355366667|gb|EHG14384.1| GTP-binding protein engB [Streptococcus intermedius F0395]
gi|383845129|gb|EID82534.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
intermedius SK54]
gi|391757748|dbj|BAM23365.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 195
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDNQLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTTRENLRAVVSLVDFRHEPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ +K + + IK R ++ + +++ SSV
Sbjct: 128 MYEFLKYYEIPVIVVATKADKIPRSKWNKHESVIKK-----RLDFDKNDDFLIFSSVNKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|417941351|ref|ZP_12584638.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK313]
gi|343388644|gb|EGV01230.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis
SK313]
Length = 195
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKT 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|417935771|ref|ZP_12579088.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
gi|343402680|gb|EGV15185.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
infantis X]
Length = 195
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDKLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSVT
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVTKE 182
Query: 202 GRDE 205
G D+
Sbjct: 183 GMDQ 186
>gi|333902485|ref|YP_004476358.1| GTP-binding protein engB [Pseudomonas fulva 12-X]
gi|333117750|gb|AEF24264.1| GTP-binding protein engB [Pseudomonas fulva 12-X]
Length = 215
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
Query: 20 KEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN 79
++ F+ S+ + CP D E A GRSN GKSS +N L LA TSK PG+TQL+N
Sbjct: 12 QQATFLISAAKVDQCPDDQGYEVAFAGRSNAGKSSALNTLTHAS-LARTSKTPGRTQLLN 70
Query: 80 HFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
F ++ +VDLPGYG+AK P + W + Y +RESL G++L++D P + D
Sbjct: 71 FFRLDDERRLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLRGLILMMDIRHPLTEFD 130
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVT 199
+W G + +P+ + TK DK+ + + QQ IR+ + H + S+
Sbjct: 131 RMMLDWSGASGMPMHILLTKADKLAFGAAKNA---LLKVQQEIRKGWGEHVSIQLFSAPK 187
Query: 200 GLGRDE 205
+G +E
Sbjct: 188 RIGVEE 193
>gi|429763149|ref|ZP_19295506.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes hadrus
DSM 3319]
gi|429179398|gb|EKY20649.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes hadrus
DSM 3319]
Length = 213
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P + PE A G+SNVGKSSLINAL+ +K A S +PGKTQ I
Sbjct: 16 IKSVNLETVCGITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTI 75
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N+ Y VDLPGYGFAK + W + Y + L V LLID P K
Sbjct: 76 NYYNINEELYYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKN 135
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ N + TK DK+K ++ + + I++ Q+ +E P S++
Sbjct: 136 DVMMYDWILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKET-----PIFPFSAL 190
Query: 199 TGLGRDEL 206
+ GRDE+
Sbjct: 191 SKQGRDEI 198
>gi|167765941|ref|ZP_02437994.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1]
gi|167712439|gb|EDS23018.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp.
SS2/1]
Length = 213
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
IK V G P + PE A G+SNVGKSSLINAL+ +K A S +PGKTQ I
Sbjct: 16 IKSVNLETVCGITSKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTI 75
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++ +N+ Y VDLPGYGFAK + W + Y + L V LLID P K
Sbjct: 76 NYYNINEELYYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKN 135
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D+ +W+ N + TK DK+K ++ + + I++ Q+ +E P S++
Sbjct: 136 DVMMYDWILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQMDKET-----PIFPFSAL 190
Query: 199 TGLGRDEL 206
+ GRDE+
Sbjct: 191 SKQGRDEI 198
>gi|374307669|ref|YP_005054100.1| ribosome biogenesis GTP-binding protein YsxC [Filifactor alocis
ATCC 35896]
gi|291166319|gb|EFE28365.1| ribosome biogenesis GTP-binding protein YsxC [Filifactor alocis
ATCC 35896]
Length = 203
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK VE S+ K PKDD + A +GRSNVGKSS IN L+ +K +A S+ PGKT+
Sbjct: 2 KIKSVEMNLSATSPKHYPKDDFLQVAFVGRSNVGKSSAINTLLNRKSIARVSQSPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN + VN+ +Y VDLPGYG+AK + W + YF+ +L+ + LL+D P+
Sbjct: 62 INFYSVNEQFYFVDLPGYGYAKLSKEEQEGWGKMMERYFIESPNLIHLFLLVDIRHEPKD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D+ + NIP+T + TK DK+ ++ ++ NI ++ + N M SS
Sbjct: 122 SDVQMYQFAHHWNIPITVIATKSDKINRSQLQK---NISVIRKKL--NLLSGEDVFMISS 176
Query: 198 VTGLGRDEL 206
+ G++E+
Sbjct: 177 LKKTGKEEI 185
>gi|154497948|ref|ZP_02036326.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC
29799]
gi|150272938|gb|EDN00095.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 199
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 5/189 (2%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
++ EFV+S+ ++ D P+D P+ GRSNVGKSS+IN ++ +K LA PGKT I
Sbjct: 5 LQRAEFVRSAAKSADFPRDGLPQVVFAGRSNVGKSSVINKILLRKNLARVGAAPGKTTHI 64
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N+FL+++ Y+VDLPGYG+AK R W + +F + + ++++DA P
Sbjct: 65 NYFLIDEKLYLVDLPGYGYAKVSQAERDRWGRLIESWFADNALMTLGIMVVDARHKPTAD 124
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D A W ++ P V K DK++ ++ + N+ ++ + P I S+
Sbjct: 125 DCTMAEWFKQSGKPFLVVANKLDKLRKSE---IEPNLARIRETL--GLPDDVKVIAFSAE 179
Query: 199 TGLGRDELL 207
G GR ELL
Sbjct: 180 KGEGRQELL 188
>gi|392310097|ref|ZP_10272631.1| GTP-binding protein YsxC [Pseudoalteromonas citrea NCIMB 1889]
Length = 212
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 106/186 (56%), Gaps = 11/186 (5%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+ S+ P D+ E A GRSN GKSS +NAL +K LA TSK PG+TQLIN F +
Sbjct: 13 FITSAPDISKLPLDEGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
++ ++DLPGYGFAK P + W Y R+SL G+++L+D P + +D+D
Sbjct: 72 DEEKRLIDLPGYGFAKVPIEMKKKWQRSLGEYLQKRKSLKGLVVLMDIRHPLKDLDMDLI 131
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENI---KSFQQLIRENYPHHPPWIMTSSVTG 200
NW + IP+ + TK DK+K +G+R E + ++ QL + H SS+ G
Sbjct: 132 NWAVDSKIPILALLTKADKLK--QGKRKAEVLQVRRALAQLDADITVHA-----FSSLKG 184
Query: 201 LGRDEL 206
+G +EL
Sbjct: 185 IGLNEL 190
>gi|291326949|ref|ZP_06126451.2| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri
DSM 1131]
gi|291312279|gb|EFE52732.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri
DSM 1131]
Length = 212
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
+FV S+ + PKD E A GRSN GKSS +NAL ++K LA TSK PG+TQLIN F
Sbjct: 20 AKFVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLF 79
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
V + +VDLPGYG+A+ P+ + W Y RE + G+++L+D P + +D+
Sbjct: 80 EVEEGVRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHPLKDLDMQ 139
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQL 181
W N+P+ + TK DK+ A G R + ++ Q L
Sbjct: 140 MIEWSVAMNVPVLVLLTKADKL--ASGARKKQLMEVRQAL 177
>gi|401565806|ref|ZP_10806624.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC6]
gi|400185012|gb|EJO19247.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC6]
Length = 207
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 9/157 (5%)
Query: 16 HSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKT 75
H I + ++ S+ R P++ RP A +GRSNVGKSSLIN+L R ++LA S KPGKT
Sbjct: 4 HVVITKATYLASAVRRDQYPEERRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKT 63
Query: 76 QLINHFLV---------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVL 126
Q IN + + ++VDLPGYG+AK +R W+ F + YFL+ E L V
Sbjct: 64 QTINFYELLLRIDGGEERHPVHLVDLPGYGYAKVGRESRKTWAKFIEEYFLHAEELRFVC 123
Query: 127 LLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
LL+D P + D +WL ++IP+ + TK DK+
Sbjct: 124 LLLDIRHTPMESDCRMFSWLVEHDIPVLVIATKADKI 160
>gi|333897647|ref|YP_004471521.1| GTP-binding protein engB [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112912|gb|AEF17849.1| GTP-binding protein engB [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 200
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 85/147 (57%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++K +E S+ P D + A++GRSNVGKSS INA+V + A S+KPGKTQ
Sbjct: 2 KVKSIELKVSAYNKTQYPNDGLKQIAVIGRSNVGKSSFINAIVNRNNFARVSQKPGKTQG 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
IN ++VN ++Y+VDLPGYG+A+ + WS + Y LVG ++L+D P
Sbjct: 62 INFYIVNNTFYLVDLPGYGYAEVSKELKKQWSINIETYLNTSAYLVGAIMLVDIRHKPTD 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMK 164
D+ N+L NI V TK DK+K
Sbjct: 122 DDVLMVNYLKNRNINFQVVATKSDKLK 148
>gi|332981499|ref|YP_004462940.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis
50-1 BON]
gi|332699177|gb|AEE96118.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis
50-1 BON]
Length = 202
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 6/202 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+IK+ EF+ S+ P+ PE +LGRSNVGKSS +N + ++LA KPGKT+
Sbjct: 2 EIKKAEFIASAAIPSQYPESGMPELVLLGRSNVGKSSFVNTIANNRKLAFIGSKPGKTRT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNR-ESLVGVLLLIDASVPPQ 136
IN +L+N +YIVDLPGYG+AK + WS + Y +R +++ G +L+D P
Sbjct: 62 INFYLINGRFYIVDLPGYGYAKVSMQEKDRWSESIETYLKSRIDNIAGAFMLLDIRHKPS 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D WL + FV K DK+ ++ + + IK ++ P I+ S
Sbjct: 122 EYDKLMWQWLRYYGVSTGFVAMKADKLNKSEVQEHLDMIKKEMEI-----PQGTDIILFS 176
Query: 197 SVTGLGRDELLLHMSQLRNYWD 218
++T G+++ L+ + + +D
Sbjct: 177 ALTKQGKNDALMAIKEALEGYD 198
>gi|405983565|ref|ZP_11041870.1| ribosome biogenesis GTP-binding protein YsxC [Slackia piriformis
YIT 12062]
gi|404388380|gb|EJZ83462.1| ribosome biogenesis GTP-binding protein YsxC [Slackia piriformis
YIT 12062]
Length = 195
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
V F + G + P RPE A +GRSNVGKSSL+N L +K+LA S KPGKT IN F
Sbjct: 6 VSFAAAYGTSGQLPASTRPEVAFVGRSNVGKSSLLNKLFNRKKLAKVSSKPGKTSTINFF 65
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
S + VDLPGYG+A+ ++ W+ GYF + V+ LID P +D+
Sbjct: 66 NAENSHF-VDLPGYGYAQVSKSEKVRWAEMINGYFEQDRNFTLVVSLIDIRHPATSLDVQ 124
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L +P V TK DK+ ++ R ++ +QL ++ + SS +GL
Sbjct: 125 MVEFLKEAELPFMIVLTKADKLSKSQIMRQKAALR--KQL---SFGPETEVVACSSESGL 179
Query: 202 GRDEL 206
G DEL
Sbjct: 180 GIDEL 184
>gi|385265702|ref|ZP_10043789.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 5B6]
gi|452856472|ref|YP_007498155.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|385150198|gb|EIF14135.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. 5B6]
gi|452080732|emb|CCP22497.1| GTPase involved in ribosome 50S subunit assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 195
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPNGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L + ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ +L IP+ + TK D K+ KG+ D+++K +Q + + I+ SS
Sbjct: 122 EDVNMYEFLKYYGIPVIVIATKAD--KIPKGKW-DKHLKVVKQTL--DMDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|386316822|ref|YP_006012986.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|408401497|ref|YP_006859460.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|410494594|ref|YP_006904440.1| GTP-binding protein engB [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417928139|ref|ZP_12571527.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|323127109|gb|ADX24406.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
gi|340766013|gb|EGR88539.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|407967725|dbj|BAM60963.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|410439754|emb|CCI62382.1| Probable GTP-binding protein engB [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
Length = 199
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P+DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y +R++L V+ L+D P K D+ +L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHEPSKEDVQMYEFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIK---SFQQLIRENYPHHPPWIMTSSVTGLGR 203
+IP+ V TK DK+ K + + +K F + R +I+ SSV +G
Sbjct: 137 KYYDIPVIIVATKADKIPRGKWNKHESMVKKTLGFDKTDR--------FIIFSSVDRVGI 188
Query: 204 DE 205
DE
Sbjct: 189 DE 190
>gi|34396175|gb|AAP55641.1| GTP binding protein [Spiroplasma citri]
gi|110004356|emb|CAK98694.1| probable gtp binding protein [Spiroplasma citri]
Length = 199
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 110/200 (55%), Gaps = 6/200 (3%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
+ K ++ S+ DD E A LG+SNVGKSS +N L +++LA S+ PGKT++
Sbjct: 3 KFKNANYITSAVNKAGWINDDLFEIAFLGKSNVGKSSFLNMLTNQRQLAKVSQIPGKTRM 62
Query: 78 INHFLVNKSWY-IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
+N F +N + + IVD PGYGFAK + +MD++ + Y RE+L V LL+D PP
Sbjct: 63 LNFFSINNNQFRIVDAPGYGFAKVGNQYKMDFAKMMEEYLTQRENLKFVCLLVDLRHPPT 122
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTS 196
+ D + +L NI + TK DK+K ++ ++ IK+ + N+ +I TS
Sbjct: 123 QDDYEMYQYLKHFNILTVLIGTKLDKVKKNDIQKHEKMIKA-----KLNFADSDYFIKTS 177
Query: 197 SVTGLGRDELLLHMSQLRNY 216
S + RDE ++L N+
Sbjct: 178 SRNKIARDECWTLFAKLLNF 197
>gi|126724908|ref|ZP_01740751.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150]
gi|126706072|gb|EBA05162.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2150]
Length = 216
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 98/186 (52%), Gaps = 5/186 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
EF+K P DR E GRSNVGKS+LINAL +K LA TS PG+TQ IN F
Sbjct: 27 TEFLKGVVAMDGMPPADRLEVCFAGRSNVGKSTLINALTGRKALARTSNTPGRTQEINFF 86
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
V +S Y+VDLPGYGFAKAP T W + K Y R++L +LID + +D +
Sbjct: 87 TVAESHYLVDLPGYGFAKAPLPTVKKWQALLKAYLSGRQNLRRAFVLIDFRHGVKDVDDE 146
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYP-HHPPWIMTSSVTG 200
L + + + TK DK+K A E I + + +P +P ++TSS G
Sbjct: 147 IMQLLNSSAVTFQVILTKADKVKEAD----REKILAQTRAALAKHPAAYPEILVTSSEKG 202
Query: 201 LGRDEL 206
G + L
Sbjct: 203 EGIENL 208
>gi|397689190|ref|YP_006526444.1| ribosome biogenesis GTP-binding protein YsxC [Melioribacter roseus
P3M]
gi|395810682|gb|AFN73431.1| ribosome biogenesis GTP-binding protein YsxC [Melioribacter roseus
P3M]
Length = 194
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+K++EFV S+ + PKDD P + GRSNVGKSS INAL ++A TS PGKT+ I
Sbjct: 1 MKKIEFVASAFNMNEIPKDDLPCAVLCGRSNVGKSSFINALFSPLKVARTSSTPGKTRSI 60
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N++LV + +Y+VDLPG+G+AK + W YF ++ V LIDA PQ +
Sbjct: 61 NYYLVERKFYLVDLPGFGYAKVSKSEKNYWELLITNYFDTNNNISTVFHLIDARHKPQPL 120
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAK--GRRPDENIKSFQQLIRENYPHHPPWIMTS 196
DL ++ +P + +K DK+K ++ G + D I+ F ++I + S
Sbjct: 121 DLMLNEFVRSRELPYFLILSKTDKLKQSEIAGAKKDV-IEVFPEII-----FGTNAFLFS 174
Query: 197 SVTGLGRDELLLHMSQL 213
+V G+ E++ +S L
Sbjct: 175 AVKHTGKKEIIKLLSSL 191
>gi|387770409|ref|ZP_10126589.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
gi|386904220|gb|EIJ69016.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella bettyae
CCUG 2042]
Length = 205
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 83/143 (58%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
+ F+ S+ + P+D E A GRSN GKS+ +NAL +K LA TSK PG+TQLIN
Sbjct: 10 KTHFMTSAAKINQLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINL 69
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
F V +VDLPGYG+A P+ ++ W Y +RE L GV++L+D P + +D
Sbjct: 70 FEVEPQCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLQGVVILMDIRHPLKDLDQ 129
Query: 141 DCANWLGRNNIPLTFVFTKCDKM 163
W +N+P+ + TK DK+
Sbjct: 130 QMIEWSVSSNLPILLLLTKSDKL 152
>gi|385809525|ref|YP_005845921.1| GTPase [Ignavibacterium album JCM 16511]
gi|383801573|gb|AFH48653.1| Putative GTPase [Ignavibacterium album JCM 16511]
Length = 195
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 21 EVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINH 80
E +FVKS D PK PE + GRSNVGKSS IN+L +K+LA S PGKT+ IN+
Sbjct: 4 EQKFVKSVYAVDDIPKLRLPEIVLCGRSNVGKSSFINSLFNRKDLAKISSTPGKTRSINY 63
Query: 81 FLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDL 140
+ ++ +YIVDLPGYG+AK R W+ + +F + V+ +ID+ P ++D+
Sbjct: 64 YDIDNKFYIVDLPGYGYAKVSLSERKKWAKLIEEFFTKSGYINLVIHIIDSRHKPTELDI 123
Query: 141 DCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSF--QQLIRENYPHHPPWIMTSSV 198
L + N+P F+ K DK+K ++ + +N+ + + EN SS+
Sbjct: 124 QLNTLLKQLNLPYIFLLNKSDKLKQSEFKIALKNLAELFPEAIYNEN------TFFYSSI 177
Query: 199 TGLGRDELLLHMS 211
G G+ E+ ++S
Sbjct: 178 KGTGKKEIKSYLS 190
>gi|352100632|ref|ZP_08958219.1| GTPase EngB [Halomonas sp. HAL1]
gi|350601052|gb|EHA17107.1| GTPase EngB [Halomonas sp. HAL1]
Length = 212
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
F+ S+ CP D E A GRSN GKSS INAL ++ LA TS+ PG+TQLIN F
Sbjct: 17 ASFIISAPTLALCPDDTGAEVAFAGRSNAGKSSAINALTQQNALARTSRTPGRTQLINFF 76
Query: 82 LV--NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
V ++S +VDLPGYG+AK P+ +++W Y NR SL G++LL+D P + D
Sbjct: 77 SVMNDESLRLVDLPGYGYAKVPESVKLEWQKHLAEYLRNRFSLRGLVLLMDVRHPLTEFD 136
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMK 164
N+ + +P+ + TK DK+K
Sbjct: 137 QMMLNYADQREMPVHILLTKADKLK 161
>gi|359785719|ref|ZP_09288866.1| GTPase EngB [Halomonas sp. GFAJ-1]
gi|359296952|gb|EHK61193.1| GTPase EngB [Halomonas sp. GFAJ-1]
Length = 220
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
FV S+ CP D E A GRSN GKSS INAL ++ LA TS+ PG+TQLIN F
Sbjct: 17 ARFVISAPTLALCPDDTGAEVAFAGRSNAGKSSAINALTQQTALARTSRTPGRTQLINFF 76
Query: 82 LV--NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID 139
V ++S +VDLPGYG+AK P+ +++W Y NR SL G++LL+D P + D
Sbjct: 77 SVMNDESRRLVDLPGYGYAKVPESVKLEWQKHLAEYLRNRFSLRGLVLLMDVRHPLTEFD 136
Query: 140 LDCANWLGRNNIPLTFVFTKCDKMK 164
N+ + +P+ + TK DK+K
Sbjct: 137 QMMLNYADQREMPVHILLTKSDKLK 161
>gi|258541763|ref|YP_003187196.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacter
pasteurianus IFO 3283-01]
gi|384041684|ref|YP_005480428.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384050199|ref|YP_005477262.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384053309|ref|YP_005486403.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384056541|ref|YP_005489208.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384059182|ref|YP_005498310.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384062476|ref|YP_005483118.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384118552|ref|YP_005501176.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421848409|ref|ZP_16281397.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|421852390|ref|ZP_16285079.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
gi|256632841|dbj|BAH98816.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635898|dbj|BAI01867.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638953|dbj|BAI04915.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|256642007|dbj|BAI07962.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645062|dbj|BAI11010.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648117|dbj|BAI14058.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651170|dbj|BAI17104.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654161|dbj|BAI20088.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|371460770|dbj|GAB26600.1| GTP-binding protein [Acetobacter pasteurianus NBRC 101655]
gi|371479470|dbj|GAB30282.1| GTP-binding protein [Acetobacter pasteurianus subsp. pasteurianus
LMG 1262 = NBRC 106471]
Length = 227
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 23 EFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL 82
EFV + + P PE A GRSNVGKSSL+NAL +K LA S +PG+T+ +N F
Sbjct: 34 EFVFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFN 93
Query: 83 VNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDC 142
+ +VD+PGYG+AKA + DW Y R SL V+LL+DA V + DL+
Sbjct: 94 LADRLMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVEMKAHDLEV 153
Query: 143 ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLG 202
+ L + + V TKCD +K R +++ IR + P +TSS TG G
Sbjct: 154 MDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEA---EIRRHPAAFPYLSLTSSQTGEG 210
Query: 203 RDELLLHMSQL 213
+ L +++
Sbjct: 211 IEGLRAELAEF 221
>gi|405760532|ref|YP_006701128.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
gi|404277421|emb|CCM07942.1| putative GTP-binding protein [Streptococcus pneumoniae SPNA45]
Length = 195
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN ++ +K LA S KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARISGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+A+ R W + Y RE+L V+ L+D P D+
Sbjct: 68 NIDDKMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLSAVVSLVDLRHDPSADDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + N+ +I+ SSV+
Sbjct: 128 MYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKK-----KLNFDPSDDFILFSSVSKA 182
Query: 202 GRDE 205
G DE
Sbjct: 183 GMDE 186
>gi|313894793|ref|ZP_07828353.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 137 str. F0430]
gi|402301996|ref|ZP_10821117.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC9]
gi|312976474|gb|EFR41929.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral
taxon 137 str. F0430]
gi|400381281|gb|EJP34084.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp.
FOBRC9]
Length = 207
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 9/149 (6%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
++ S+ R P+ RPE A +GRSNVGKSSLIN+L R ++LA S KPGKTQ IN + +
Sbjct: 12 YLASAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTINFYEL 71
Query: 84 ---------NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVP 134
+IVDLPGYG+AKA +R W+ F + YFL E L V LL+D
Sbjct: 72 LLRIDGGEERHPVHIVDLPGYGYAKAARDSRKTWAKFIEEYFLTSEYLRFVCLLLDIRHM 131
Query: 135 PQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
P + D + +WL ++IP+ V TK DK+
Sbjct: 132 PMESDRNMFSWLIAHDIPVLVVATKADKL 160
>gi|154686955|ref|YP_001422116.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus
amyloliquefaciens FZB42]
gi|375363232|ref|YP_005131271.1| putative GTP-binding protein engB [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|384266365|ref|YP_005422072.1| GTP-binding protein EngB [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899401|ref|YP_006329697.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|394991896|ref|ZP_10384692.1| GTP-binding protein YsxC [Bacillus sp. 916]
gi|421730777|ref|ZP_16169903.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346033|ref|YP_007444664.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens IT-45]
gi|166225941|sp|A7Z7A9.1|ENGB_BACA2 RecName: Full=Probable GTP-binding protein EngB
gi|154352806|gb|ABS74885.1| YsxC [Bacillus amyloliquefaciens FZB42]
gi|371569226|emb|CCF06076.1| putative GTP-binding protein engB [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|380499718|emb|CCG50756.1| putative GTP-binding protein EngB [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387173511|gb|AFJ62972.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|393807255|gb|EJD68578.1| GTP-binding protein YsxC [Bacillus sp. 916]
gi|407074931|gb|EKE47918.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849791|gb|AGF26783.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens IT-45]
Length = 195
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L + ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSA 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSS 197
D++ +L IP+ + TK D K+ KG+ D+++K +Q + + I+ SS
Sbjct: 122 EDVNMYEFLKYYGIPVIVIATKAD--KIPKGKW-DKHLKVVKQTL--DMDPEDELILFSS 176
Query: 198 VTGLGRDE 205
T G+DE
Sbjct: 177 ETKKGKDE 184
>gi|410634865|ref|ZP_11345492.1| GTP-binding protein [Glaciecola lipolytica E3]
gi|410145609|dbj|GAC12697.1| GTP-binding protein [Glaciecola lipolytica E3]
Length = 205
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%)
Query: 17 SQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
S + +F+ S+ + +DD E A GRSN GKSS +N L R+K LA TSK PG+TQ
Sbjct: 2 SHYSQAKFITSAPDIRHLQQDDGCEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQ 61
Query: 77 LINHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQ 136
LIN F + + ++DLPGYGFAK P ++ W Y R+SL G+++L+D P +
Sbjct: 62 LINVFEIEEGRRLIDLPGYGFAKVPMEMKLKWQKALGEYLQERKSLGGLVVLMDIRHPFK 121
Query: 137 KIDLDCANWLGRNNIPLTFVFTKCDKMKVAK 167
+D W N+P+ + TK DK+K K
Sbjct: 122 DLDQQLIYWAVERNLPVLALLTKADKLKSGK 152
>gi|329116776|ref|ZP_08245493.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parauberis NCFD 2020]
gi|326907181|gb|EGE54095.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
parauberis NCFD 2020]
gi|457095610|gb|EMG26081.1| GTP-binding protein EngB [Streptococcus parauberis KRS-02083]
Length = 199
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 5/179 (2%)
Query: 27 SSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKS 86
S+ P DD PE A+ GRSNVGKSS IN ++ +K LA TS KPGKTQL+N F ++
Sbjct: 17 SAANQSHYPDDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDK 76
Query: 87 WYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL 146
VD+PGYG+AK R W + Y R++L V+ L+D P D+ ++L
Sbjct: 77 LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHEPSTEDVQMYDFL 136
Query: 147 GRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDE 205
IP+ V TK DK+ K + + +K + N+ +I+ SSV +G D+
Sbjct: 137 KYYEIPVIVVATKADKIPRGKWNKHESMVKK-----KLNFDKSDQFIVFSSVDRIGIDQ 190
>gi|51246489|ref|YP_066373.1| hypothetical protein DP2637 [Desulfotalea psychrophila LSv54]
gi|81641346|sp|Q6AJW0.1|ENGB_DESPS RecName: Full=Probable GTP-binding protein EngB
gi|50877526|emb|CAG37366.1| conserved hypothetical GTP-binding protein [Desulfotalea
psychrophila LSv54]
Length = 193
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
+ ++ F+ S P+D PEFA GRSNVGKSSL+N L+R+ S +PGKTQ +
Sbjct: 3 LNDITFLLSVHGLDQLPEDGLPEFAFAGRSNVGKSSLMNTLLRRSGFVKVSGRPGKTQGL 62
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N F + +VDLPGYGFA+ + +W Y RE+L V+++ID P+ +
Sbjct: 63 NFFQAAEDCMLVDLPGYGFARVSKEMQNNWQKLITSYISEREALKCVVVIIDIRHEPKAL 122
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSV 198
D +WL +P+ ++TK DK+ + R + + + ++ I+ SS
Sbjct: 123 DRQLLDWLREQKVPVLPIYTKIDKLSGNQLSRHAAILDAGHGIKKDER------ILFSSK 176
Query: 199 TGLGRDELL 207
TG GRDEL+
Sbjct: 177 TGQGRDELI 185
>gi|374340488|ref|YP_005097224.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinitoga
piezophila KA3]
gi|372102022|gb|AEX85926.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Marinitoga
piezophila KA3]
Length = 192
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Query: 19 IKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI 78
K++E VK++ D P E A GRSNVGKSSL+N L K +A S PGKT+ I
Sbjct: 2 FKKIELVKTAYTKGDYPPILNAEIAFAGRSNVGKSSLLNKLFGIK-IAKISSNPGKTRSI 60
Query: 79 NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKI 138
N + V+ Y+VDLPGYGFA + W+ + YF NR SL V LLID PQK
Sbjct: 61 NFYNVDNKGYLVDLPGYGFANVSKSEKKKWADLMEDYFKNRYSLQMVFLLIDHRHEPQKK 120
Query: 139 DLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIM--TS 196
D++ WL IP V TK DK+K +E +K LI+ + + +I S
Sbjct: 121 DIEMIQWLKELEIPFMIVLTKLDKLK------KNERVKQL-NLIKSHLSKYGDYIYFPVS 173
Query: 197 SVTGLGRDEL 206
S TG G +L
Sbjct: 174 SKTGEGIGQL 183
>gi|315221694|ref|ZP_07863610.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|421491017|ref|ZP_15938384.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
gi|315189181|gb|EFU22880.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus F0211]
gi|400372014|gb|EJP24963.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus
anginosus SK1138]
Length = 195
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 5/183 (2%)
Query: 22 VEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHF 81
E + S+ P+D+ PE A+ GRSNVGKSS IN L+ +K LA TS KPGKTQL+N F
Sbjct: 8 AEILLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF 67
Query: 82 LVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLD 141
++ VD+PGYG+AK R W + Y +RE+L V+ L+D P D+
Sbjct: 68 NIDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDVRHEPSTDDVQ 127
Query: 142 CANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGL 201
+L IP+ V TK DK+ K + + IK + ++ + +I+ SSV
Sbjct: 128 MYEFLKYYEIPVIVVATKADKVPRGKWNKYESVIKK-----KLDFDKNDDFIIFSSVNKD 182
Query: 202 GRD 204
G D
Sbjct: 183 GLD 185
>gi|289166590|ref|YP_003456728.1| GTP-binding protein [Legionella longbeachae NSW150]
gi|288859763|emb|CBJ13744.1| GTP-binding protein [Legionella longbeachae NSW150]
Length = 202
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 10/192 (5%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
F+KS+ R P D E A GRSN GKSS +N L K LA TSK PG+TQLIN F +
Sbjct: 13 FLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGRTQLINLFQL 72
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+++ +VDLPGYG+AK +MDW Y R+SL G++LL+D P + +D+
Sbjct: 73 DEAHRLVDLPGYGYAKVALRVKMDWQENLAHYLEVRKSLKGLILLMDIRHPLKDLDVMMV 132
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
+W +P+ + TK DK+ ++ IK+ +R+ Y I S + L +
Sbjct: 133 DWALDRGLPVHILLTKSDKLSRSE-------IKNTVSKVRKYYELAQHLITVQSFSSLKK 185
Query: 204 D---ELLLHMSQ 212
D EL+ ++Q
Sbjct: 186 DGIGELIALLNQ 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,591,830,853
Number of Sequences: 23463169
Number of extensions: 140310340
Number of successful extensions: 449847
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3687
Number of HSP's successfully gapped in prelim test: 7868
Number of HSP's that attempted gapping in prelim test: 437916
Number of HSP's gapped (non-prelim): 14872
length of query: 219
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 82
effective length of database: 9,144,741,214
effective search space: 749868779548
effective search space used: 749868779548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)