RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 027757
(219 letters)
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 109 bits (272), Expect = 1e-30
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 18 QIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQL 77
++ + E V S+ + + P+ PE A+ GRSNVGKSS IN+L+ +K LA TS KPGKTQ
Sbjct: 2 KVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQT 61
Query: 78 INHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+N +++N + VD+PGYGFAK R W + Y RE L V+ ++D P
Sbjct: 62 LNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSN 121
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMT 195
D+ +L IP+ + TK DK+ +++R+ P I+
Sbjct: 122 DDVQMYEFLKYYGIPVIVIATKADKIP-------KGKWDKHAKVVRQTLNIDPEDELILF 174
Query: 196 SSVTGLGRDELLLHMSQLRN 215
SS T G+DE + ++ N
Sbjct: 175 SSETKKGKDEAWGAIKKMIN 194
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 91.0 bits (224), Expect = 2e-23
Identities = 54/189 (28%), Positives = 77/189 (40%), Gaps = 4/189 (2%)
Query: 24 FVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV 83
FV S+ + P D E A GRSN GKSS +N L +K LA TSK PG+TQLIN F V
Sbjct: 1 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 60
Query: 84 NKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCA 143
+VDLPGYG+A+ P+ + W Y R+SL G+ + +
Sbjct: 61 ADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGL---VVLMDIRHPLKDLDQ 117
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
+ V K + ++ + + SS+ G
Sbjct: 118 QMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAV-LAFNGDVQVETFSSLKKQGV 176
Query: 204 DELLLHMSQ 212
D+L +
Sbjct: 177 DKLRQKLDT 185
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 76.7 bits (187), Expect = 4e-18
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 22/185 (11%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
GRSNVGKS+LI L KK K+PG T+ I K+ I+D+PG+GF
Sbjct: 4 IFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKIIEI-EWKNHKIIDMPGFGFMMGLP 60
Query: 103 VTRMDWSSF--TKGYFLNRESLVGVLLLIDASVPPQ-----------KIDLDCANWLGRN 149
+ N +++ +L++D P+ ID++ +L
Sbjct: 61 KEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLREL 120
Query: 150 NIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPH-HPPWIMTSSVTGLGRDELLL 208
+IP K DK+K E I + +I S+ G + L
Sbjct: 121 DIPTIVAVNKLDKIK-----NVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKN 175
Query: 209 HMSQL 213
+ ++
Sbjct: 176 RIFEV 180
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 78.7 bits (193), Expect = 8e-18
Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 17/151 (11%)
Query: 43 AILGRSNVGKSSLINALV---RKKELALTSKKPGKTQLIN--HFLVNKSWYIVDLPGYGF 97
A+ G + GKSS IN L ++E A + T + + DLPG G
Sbjct: 60 AVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGS 119
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
P T Y + +I ++ +K D+D A + FV
Sbjct: 120 TNFPPDT----------YLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMMKKEFYFVR 169
Query: 158 TKCDKM--KVAKGRRPDENIKSFQQLIRENY 186
TK D A G + + Q IR N
Sbjct: 170 TKVDSDITNEADGEPQTFDKEKVLQDIRLNC 200
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 66.5 bits (161), Expect = 1e-14
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 15/165 (9%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
I+G+ NVGKS+L+N L+ + +T +I+ +V + + G +
Sbjct: 4 VIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRS--E 61
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ + E VL ++DAS P + D N V K D
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILER--IKNKRYLVVINKVDV 119
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELL 207
++ K ++ I+ + S++ G G ++L
Sbjct: 120 VE-----------KINEEEIKNKLGTDRHMVKISALKGEGLEKLE 153
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 63.6 bits (153), Expect = 3e-13
Identities = 27/172 (15%), Positives = 61/172 (35%), Gaps = 12/172 (6%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQ-LINHFLVNKSWYIVDLPGYGFAKAP 101
AI+GR NVGKS+L+N L+ +K +++TS+K T+ I ++ + + G
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQK-ISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
K + + V+ +++ + ++ + V +
Sbjct: 68 KRAINRL--MNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDN 125
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
++ + + + S+ TGL D + + +
Sbjct: 126 VQ--------EKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKH 169
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 63.5 bits (153), Expect = 3e-13
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 37 DDRPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV---NKSWYIVDLP 93
D + AI+GR NVGKS+L NA++ K+ AL S PG T+ V + + VD
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAILNKE-RALVSPIPGTTRDPVDDEVFIDGRKYVFVDTA 64
Query: 94 GYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPL 153
G + ++ S + ++ V V++++DA+ + D A + R
Sbjct: 65 GLRRKSRVEPRTVEKYSNYRVVDSIEKADV-VVIVLDATQGITRQDQRMAGLMERRGRAS 123
Query: 154 TFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHP--PWIMTSSVTGLGRDELL 207
VF K D + ++ F +L RE P I TS+ G D ++
Sbjct: 124 VVVFNKWDLV-----VHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMI 174
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 63.4 bits (153), Expect = 3e-13
Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 13/178 (7%)
Query: 40 PEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN----HFLVNKSWYIVDLPGY 95
+ ++G +VGKS+L++ + K + T + N +S+ + DLPG
Sbjct: 2 ADVGLVGFPSVGKSTLLSVVSSAK--PKIADYHFTTLVPNLGMVETDDGRSFVMADLPGL 59
Query: 96 GFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTF 155
V FL V++ + + D +
Sbjct: 60 IEGAHQGVGLGH-------QFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYN 112
Query: 156 VFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ + + + +E P S+VT G ELL ++
Sbjct: 113 LRLTERPQIIVANKMDMPEAAENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQ 170
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 61.6 bits (148), Expect = 1e-12
Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 17/178 (9%)
Query: 40 PEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLIN----HFLVNKSWYIVDLPGY 95
+ ++G N GKSSL+ A+ R + P T N + + + D+PG
Sbjct: 2 ADVGLVGYPNAGKSSLLAAMTRAH--PKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGI 59
Query: 96 GFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTF 155
+ + + +L ++DA+ P K +G + L
Sbjct: 60 IEGASEGKGLG------LEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLR 113
Query: 156 VFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ KV +E +K+ + + S++TG G L + L
Sbjct: 114 RPSLVALNKVDLL--EEEAVKALADALAREGLA---VLPVSALTGAGLPALKEALHAL 166
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 59.8 bits (143), Expect = 5e-12
Identities = 35/166 (21%), Positives = 60/166 (36%), Gaps = 12/166 (7%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
I+GR NVGKS+L N LV+KK+ A+ + G T+ V L
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKK-AIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDN 61
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + RE+ + VL ++D K D A++L ++ + V K +
Sbjct: 62 PQDIISQKMKEVTLNMIREADL-VLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAE 120
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELL 207
++ + E I S+ + D +L
Sbjct: 121 NLREFEREVKPELYSL----------GFGEPIPVSAEHNINLDTML 156
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 59.0 bits (141), Expect = 1e-11
Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
AI+G+ NVGKS+L+N L+ K +A S +P T+ ++ +
Sbjct: 9 AIVGKPNVGKSTLLNNLLGVK-VAPISPRPQTTRKRLRGILT--EGRRQIVFVDTPGLHK 65
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ + + V+ ++D PP D A L V
Sbjct: 66 PMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVG---KVPILLVG 122
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
K+ + P+E +K++ + M S++ EL + L
Sbjct: 123 NKLDAAKYPEEAMKAYHE-----LLPEAEPRMLSALDERQVAELKADLLAL 168
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 56.2 bits (134), Expect = 2e-10
Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 23/179 (12%)
Query: 39 RPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA 98
+P I G N GK+SL+ L +P + V L +
Sbjct: 3 QPSIIIAGPQNSGKTSLLTLLTTDS------VRPTVVSQEPLSAADYDGSGVTLVDFPG- 55
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWL----------GR 148
+ + + G++ ++D++V P+K+ A +L
Sbjct: 56 -----HVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLT-TTAEFLVDILSITESSCE 109
Query: 149 NNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELL 207
N I + K + + + ++S Q + E + + L
Sbjct: 110 NGIDILIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTL 168
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 51.7 bits (122), Expect = 4e-09
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 15/170 (8%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
I GR N GKSSL+NAL ++ A+ + G T+ + + + L A +
Sbjct: 5 VIAGRPNAGKSSLLNALAGRE-AAIVTDIAGTTRDVLRE--HIHIDGMPLHIIDTAGLRE 61
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ + + E VL ++D + + + +K
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + I S+ TG G D L H+ Q
Sbjct: 122 ADITGETLGMSEVNGH------------ALIRLSARTGEGVDVLRNHLKQ 159
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 51.0 bits (121), Expect = 9e-09
Identities = 22/169 (13%), Positives = 47/169 (27%), Gaps = 14/169 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G S VGKS+L++ R + + G V+ + +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ G L + + + L +NI + V K D
Sbjct: 67 RRITSAYYRGAVGALLV------YDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 120
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM 210
+ ++ +I TS++ +E ++
Sbjct: 121 LR--------HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 161
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 49.0 bits (116), Expect = 8e-08
Identities = 19/191 (9%), Positives = 52/191 (27%), Gaps = 28/191 (14%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
++G+ VGKSS +N+++ + + S + +++ + +++
Sbjct: 36 LVMGKGGVGKSSTVNSII-GERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGG 94
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIP-----LTFVF 157
+ K + L++ V + + + +D A + +
Sbjct: 95 YINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVAL 154
Query: 158 TKCDK----------------------MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
T ++ + D ++ EN
Sbjct: 155 THAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSD 214
Query: 196 SSVTGLGRDEL 206
V G +
Sbjct: 215 EKVLPNGIAWI 225
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 46.4 bits (109), Expect = 4e-07
Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 22/182 (12%)
Query: 36 KDDRPEF--AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY---IV 90
+D I+G S VGKSSL+ + G + V+ + I
Sbjct: 2 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 61
Query: 91 DLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNN 150
D G + + + T Y+ + ++ V + + +
Sbjct: 62 DTAG----------QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTR 111
Query: 151 IPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM 210
+ + K + +E +K ++ H +I S+ T G +
Sbjct: 112 NDIVNMLVGNKIDKENREVDRNEGLKFARK-------HSMLFIEASAKTCDGVQCAFEEL 164
Query: 211 SQ 212
+
Sbjct: 165 VE 166
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 44.7 bits (104), Expect = 1e-06
Identities = 19/170 (11%), Positives = 44/170 (25%), Gaps = 14/170 (8%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
++G GK++ +N + + ++ T N + K + L G
Sbjct: 6 TLVGLQYSGKTTFVNVIASGQ----FNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFR 61
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ ++ + + + + IP+ + K D
Sbjct: 62 SMWERYCRGVSAIVYMVDAAD-----QEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDL 116
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ E + I++ S D L + Q
Sbjct: 117 PGALDEKELIEKMN--LSAIQD---REICCYSISCKEKDNIDITLQWLIQ 161
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 43.8 bits (102), Expect = 3e-06
Identities = 19/169 (11%), Positives = 42/169 (24%), Gaps = 15/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
I+G N GK++++ + + + + I + + +
Sbjct: 20 IVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTY 79
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
+RE ++ L K D
Sbjct: 80 YTNTEFVIVVVDSTDRER----------ISVTREELYKMLAHEDLRKAGLLIFANKQDVK 129
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + +K I++ H ++TG G + L M
Sbjct: 130 ECMTVAEISQFLK--LTSIKD---HQWHIQACCALTGEGLCQGLEWMMS 173
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 44.3 bits (103), Expect = 3e-06
Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 40/212 (18%)
Query: 40 PEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAK 99
P ++LG + GK++L++ + + + G TQ I + +
Sbjct: 6 PIVSVLGHVDHGKTTLLDHIR--GSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKF 63
Query: 100 APDVTRM--------DWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNI 151
+ T +FT +L++D + + + N L
Sbjct: 64 SIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRT 123
Query: 152 PLTFVFTKCDK-----------MKVAKGRRPDENIKSFQQLIRE---------------- 184
P K D+ ++ + + + E
Sbjct: 124 PFVVAANKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFD 183
Query: 185 ---NYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
++ I S++TG G ELL + L
Sbjct: 184 RVTDFASQVSIIPISAITGEGIPELLTMLMGL 215
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 43.5 bits (101), Expect = 3e-06
Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 15/171 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G VGKSS+I + + + V+
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGIF-------TKDYKKTIGVDFLERQIQVNDEDVRLMLWD 57
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ ++ + TK Y+ ++ V V D +IP V K D
Sbjct: 58 TAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQNKID 117
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ D++ ++ + TS L E+ ++++
Sbjct: 118 LL--------DDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAE 160
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 43.4 bits (101), Expect = 4e-06
Identities = 24/175 (13%), Positives = 52/175 (29%), Gaps = 25/175 (14%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
+LG N GK++L+ L + + V G+
Sbjct: 20 LLLGLDNAGKTTLLKQLA------------SEDISHITPTQGFNIKSVQSQGFKLNVWDI 67
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANW-----LGRNNIPLTFVF 157
+ + + YF N + ++ +ID++ + + + +P+
Sbjct: 68 GGQRKIRPYWRSYFENTD---ILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFA 124
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K D + P I L S++TG G + + + +
Sbjct: 125 NKQDLL----TAAPASEIAEGLNL-HTIRDRVWQIQSCSALTGEGVQDGMNWVCK 174
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 42.8 bits (100), Expect = 6e-06
Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 21/173 (12%)
Query: 44 ILGRSNVGKSSLINALVRKK---ELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKA 100
++G S VGKS L+ V K T K + ++ I D G
Sbjct: 7 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAG------ 60
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
+ + + T Y+ +G++L+ D + ++ +
Sbjct: 61 ----QERFRTITTAYYRGA---MGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLV 113
Query: 161 DKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ R Q P+I +S+ +E+ +++L
Sbjct: 114 GNKSDMETRVVTA-----DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKL 161
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 42.7 bits (99), Expect = 7e-06
Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 17/175 (9%)
Query: 40 PEF--AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGF 97
E+ ++G VGKS+L L++ + + + ++ + L G
Sbjct: 2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQ 61
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
+ + + + + + + +++P+ V
Sbjct: 62 EEYSAMRDQYMRTGEGFLCVFA------INNTKSFEDIHQYREQIKRVKDSDDVPMVLVG 115
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
KCD +Q + P+I TS+ T G ++ + +
Sbjct: 116 NKCDLAA---------RTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVR 161
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 42.4 bits (98), Expect = 9e-06
Identities = 20/170 (11%), Positives = 37/170 (21%), Gaps = 15/170 (8%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
ILG GK++++ L + I N +
Sbjct: 9 LILGLDGAGKTTILYRLQVGE----------VVTTIPTIGFNVETVTYKNLKFQVWDLGG 58
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+T + + V D + + L K D
Sbjct: 59 LTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDM 118
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + TS+ G G DE + + +
Sbjct: 119 EQAMTSSEMAN-----SLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVE 163
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 42.2 bits (98), Expect = 9e-06
Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 18/175 (10%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG VGKS+L V + + + + L G
Sbjct: 8 VLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT------ 61
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASV--PPQKIDLDCANWLGRNNIPLTFVFTKCD 161
++S Y N + + V L++ + + +P+ V K D
Sbjct: 62 --EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVD 119
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNY 216
+ + + L E P++ TS+ + DEL + + NY
Sbjct: 120 LESEREVSSSEG-----RALAEE---WGCPFMETSAKSKTMVDELFAEIVRQMNY 166
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 42.2 bits (98), Expect = 1e-05
Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 20/172 (11%)
Query: 44 ILGRSNVGKSSLINALVRKK---ELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKA 100
++G + GKS L++ + KK + T +++IN I D G
Sbjct: 10 VIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG------ 63
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
+ + S T+ Y+ G LL+ D + L R V C
Sbjct: 64 ----QERFRSVTRSYYRGAA---GALLVYDITSRETYNALTNWLTDARMLASQNIVIILC 116
Query: 161 DKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K R +++ + ++ TS++TG +E + ++
Sbjct: 117 GNKKDLDADREVTFLEASRFAQENEL----MFLETSALTGENVEEAFVQCAR 164
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 42.1 bits (98), Expect = 1e-05
Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 28/178 (15%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY---IVDLPGYGFA 98
++G S VGK+ ++ + G I ++ I D G
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG---- 64
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDA----SVPPQKIDLDCANWLGRNNIPLT 154
+ R +++ +G +G++L+ D S + + ++
Sbjct: 65 --QERFRTITTAYYRG-------AMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKM 115
Query: 155 FVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ KCD D+ S ++ + + ++ TS+ + + +++
Sbjct: 116 ILGNKCDVN--------DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 165
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 41.6 bits (96), Expect = 1e-05
Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 15/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
++G GK++++ L + +T+ + N S+ + D+ G D
Sbjct: 5 MVGLDAAGKTTILYKLKLGE--IVTTIPTIGFNVETVEYKNISFTVWDVGGQ------DK 56
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
R W + + G++ ++D++ + + L
Sbjct: 57 IRPLWRHYFQNTQ-------GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 109
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K + + + + + T + +G G E L +S
Sbjct: 110 KQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSN 158
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 40.6 bits (94), Expect = 4e-05
Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 20/175 (11%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPG---KTQLINHFLVNKSWYIVDLPGYGFA 98
I+G S+VGK+S + G K + I I D G
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAG---- 63
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT 158
+ + + T Y+ G +L+ D + A I
Sbjct: 64 ------QERYRTITTAYYRGAM---GFILMYDI----TNEESFNAVQDWSTQIKTYSWDN 110
Query: 159 KCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ K DE + S ++ + + S+ + + + +
Sbjct: 111 AQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDV 165
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 40.8 bits (94), Expect = 4e-05
Identities = 18/150 (12%), Positives = 38/150 (25%), Gaps = 9/150 (6%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
+G + GK+ L L+ + + T + VN +
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQ---YRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
++ + + V + + +N+ L K D
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI 120
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
+ + I+ QQL +E
Sbjct: 121 A----MAKSAKLIQ--QQLEKELNTLRVTR 144
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 40.0 bits (92), Expect = 5e-05
Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 11/171 (6%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
+LG + VGKSS++ V G L +N+ ++ +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERF 65
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ Y + +LV + S + + + +I + V K D
Sbjct: 66 ASLAPMY------YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKID 119
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
++ R+ + ++L E + TS+ TG +++ L + +
Sbjct: 120 MLQEGGERKV--AREEGEKLAEE---KGLLFFETSAKTGENVNDVFLGIGE 165
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 40.1 bits (92), Expect = 5e-05
Identities = 23/171 (13%), Positives = 40/171 (23%), Gaps = 12/171 (7%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
LG N GK++L++ L + T + G
Sbjct: 5 FLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARR 59
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
D+ G ++ + + N ++P + K D
Sbjct: 60 LWKDYFPEVNGIVFLVDAAD-----PERFDEARVELDALFNIAELKDVPFVILGNKIDAP 114
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPW--IMTSSVTGLGRDELLLHMSQ 212
+ + P M S V G E +SQ
Sbjct: 115 NAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 39.9 bits (92), Expect = 5e-05
Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 14/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
++G VGKS+L + + + + L + I L G +
Sbjct: 9 MVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAI 68
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
R ++ +G+ V + +++ N+P V K D
Sbjct: 69 -RDNYFRSGEGFL-----CVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLE 122
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + ++ Q + ++ TS+ T D++ + +
Sbjct: 123 DKRQVSVEEAKNRADQ--------WNVNYVETSAKTRANVDKVFFDLMR 163
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 39.7 bits (91), Expect = 9e-05
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 21/178 (11%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
LG N GK++L++ L + + ++ + + + G F
Sbjct: 18 FLGLDNAGKTTLLHMLKDDR------------LGQHVPTLHPTSEELTIAGMTFTTFDLG 65
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID--LDCANWLGRNNIPLTFVFTKCD 161
+ K Y +V ++ D + + N+P+ + K D
Sbjct: 66 GHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKID 125
Query: 162 KMKVAKGRRPDENIKSFQQL-------IRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + R E + Q ++E M S + G E M+Q
Sbjct: 126 RPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQ 183
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 39.3 bits (90), Expect = 1e-04
Identities = 35/175 (20%), Positives = 55/175 (31%), Gaps = 15/175 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY----IVDLPGYGF 97
ILG S VGK+SL++ V K G L V+ + D G
Sbjct: 5 VIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ-- 62
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
S Y ++ + +S K D N P TF F
Sbjct: 63 -------ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPF 115
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
A+ + + KS Q+L + P +TS+ + D +++
Sbjct: 116 VILGNKIDAEESKKIVSEKSAQELAKSL--GDIPLFLTSAKNAINVDTAFEEIAR 168
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 38.9 bits (89), Expect = 2e-04
Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 24/177 (13%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G VGKS+L ++ + + + +++ + L G +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFG 67
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASV-----PPQKIDLDCANWLGRNNIPLTFV 156
+ + G LL+ + K R+ P+ +
Sbjct: 68 AMREQYMRTG-----------EGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILI 116
Query: 157 FTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
K D + + ++ + ++ S+ + D+ + ++
Sbjct: 117 GNKADLD--------HQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRV 165
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 38.5 bits (88), Expect = 2e-04
Identities = 20/169 (11%), Positives = 52/169 (30%), Gaps = 14/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG S VGKSSL+ V+ + G L ++ + ++ +
Sbjct: 11 LLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTA---GQER 67
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ +G +++ D + + V
Sbjct: 68 YHSLAPMYYRGAQ-------AAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 120
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+R + ++ + ++ TS+ T + +E+ + +++
Sbjct: 121 ADLANKRAVDFQEAQSYADDNSL----LFMETSAKTSMNVNEIFMAIAK 165
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 38.9 bits (89), Expect = 2e-04
Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 7/166 (4%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
I G + GK++L L + K P ++ + L Y
Sbjct: 8 LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQ--KRGITIDIGFSAFKLENYRITLVD 65
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
D + + V+ + + + IP+ V TK D
Sbjct: 66 APGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFN---IPIIVVITKSD 122
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELL 207
+ +R + +KS L + + I S+ TG G DEL
Sbjct: 123 NAGTEEIKRTEMIMKSI--LQSTHNLKNSSIIPISAKTGFGVDELK 166
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 38.5 bits (88), Expect = 2e-04
Identities = 22/169 (13%), Positives = 46/169 (27%), Gaps = 12/169 (7%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
I+G GK+ L+ + + + + + + + K + G +
Sbjct: 7 IVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRL 66
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ + L + ++ N+P+ V K D
Sbjct: 67 RPLSYPDTDVILMCFSIDSPDSL---ENIPEKWTPEVKHFC----PNVPIILVGNKKDLR 119
Query: 164 KVAKGRRPDENIKSFQQLIRE-----NYPHHPPWIMTSSVTGLGRDELL 207
RR +K E N ++ S+ T G E+
Sbjct: 120 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 168
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 39.0 bits (90), Expect = 2e-04
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 11 GPYAGHSQIKEVEFVKSSGRAKDCPKDDRPEFAILGRSNVGKSSLINALVRKKELALTSK 70
G KE+ K K I+G NVGKS+LIN L +K +A T
Sbjct: 84 GLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKN-IAKTGD 142
Query: 71 KPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
+PG T V K ++D PG + K D
Sbjct: 143 RPGITTSQQWVKVGKELELLDTPGILWPKFED 174
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 38.1 bits (87), Expect = 2e-04
Identities = 17/169 (10%), Positives = 50/169 (29%), Gaps = 17/169 (10%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
++G GK++ + + + K V+ + + F
Sbjct: 8 LVGDGGTGKTTFVKRHLTGEF-------EKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 60
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ + GY++ + + + + + NIP+ K D
Sbjct: 61 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVD-- 118
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
++ K + I + + + S+ + ++ L +++
Sbjct: 119 --------IKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLAR 159
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 38.5 bits (88), Expect = 2e-04
Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 12/168 (7%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
++G VGK+ L+ + + +V+ + L + D
Sbjct: 10 VVGDGAVGKTCLLISYT-TNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDR 68
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
R T + + + ++ C N P+ V TK D
Sbjct: 69 LRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHC------PNTPIILVGTKLDLR 122
Query: 164 KVAKGRRPDENIKSFQQLIRENYP-----HHPPWIMTSSVTGLGRDEL 206
+ K + ++ S++T G +
Sbjct: 123 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTV 170
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 38.1 bits (87), Expect = 2e-04
Identities = 29/165 (17%), Positives = 47/165 (28%), Gaps = 16/165 (9%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G SNVGK+ L + T G ++ + L
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDT------ 58
Query: 102 DVTRMDWSSFTKGYFLNRES--LVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTK 159
S + Y+ N + V + + + +C L N+IP V K
Sbjct: 59 AGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNK 118
Query: 160 CDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRD 204
CD + Q+ H P TS+ D
Sbjct: 119 CDLRSAIQVPTDL-----AQKFADT---HSMPLFETSAKNPNDND 155
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 38.1 bits (87), Expect = 3e-04
Identities = 19/170 (11%), Positives = 47/170 (27%), Gaps = 15/170 (8%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
+LG N GK++++ + T N + + +++ G
Sbjct: 6 LMLGLDNAGKTTILKKFNGED-----VDTISPTLGFNIKTLEHRGFKLNIWDVGG---QK 57
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
R W ++ + + Q + + L + + +K
Sbjct: 58 SLRSYWRNYFESTDGLIWVVD-----SADRQRMQDCQRELQSLLVEERLAGATLLIFANK 112
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + ++ + HH S+VTG + +
Sbjct: 113 QDLPGALSCNAIQEALEL--DSIRSHHWRIQGCSAVTGEDLLPGIDWLLD 160
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 37.9 bits (87), Expect = 4e-04
Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 22/175 (12%)
Query: 42 FAILGRSNVGKSSLINALVRKK---ELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA 98
++G S VGKS L+ + T K + + I D G
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAG---- 64
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT 158
+ + + T Y+ G++++ D + + +
Sbjct: 65 ------QERFRTITSSYYRGSH---GIIIVYDVTDQE-----SFNGVKMWLQEIDRYATS 110
Query: 159 KCDKMKVA-KGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K+ V K D+ + + + P++ TS++ ++ L M++
Sbjct: 111 TVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 37.5 bits (86), Expect = 4e-04
Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 22/175 (12%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWY---IVDLPGYGFA 98
++G + VGK+ L+ + G +I +N I D G
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG---- 63
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLID-ASVPPQKIDLDCANWLGRNNIPLTFVF 157
+ + S T+ Y+ + +L+ + S L N + V
Sbjct: 64 ------QERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 117
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K D + S Q+ + ++ TS+ ++L L ++
Sbjct: 118 NKIDLA--------ERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLAC 164
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 37.2 bits (85), Expect = 5e-04
Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 14/171 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
+ I+G VGKS L++ KK +A G V+ + + +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERF 66
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ G + + ++ L A L N + + K D
Sbjct: 67 RAVTRSYYRGAAGALMV------YDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 120
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ ++++ + + ++ S+ TG ++ L ++
Sbjct: 121 --------LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAK 163
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 37.2 bits (85), Expect = 5e-04
Identities = 26/175 (14%), Positives = 50/175 (28%), Gaps = 21/175 (12%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSW----YIVDLPGYGF 97
++G S VGK+ L+ LA T N L + D G
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG--- 65
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
+ R ++ + +LLL D + ++
Sbjct: 66 ---QERFRSVTHAYYRDAH-------ALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVAL 115
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ E + + + + P++ TS+ TGL D +++
Sbjct: 116 MLLGNKVDS----AHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAK 166
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 37.2 bits (85), Expect = 7e-04
Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 20/192 (10%)
Query: 36 KDDRPE--FAILGRSNVGKSSLINALVRK-KELALTSKKPGKTQLINHFLVNKSWYIVDL 92
+PE ++G + GK++L+ A+ K G T + + N
Sbjct: 3 PKVQPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCESCK 62
Query: 93 PGYGFAKAPDVTRMDWSSFTKG-----------------YFLNRESLVGVLLLIDASVPP 135
+ P K L+ +L+ +L+ A+ P
Sbjct: 63 KPEAYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEP 122
Query: 136 QKIDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMT 195
+++ I + + +K+ V + +Q + + + P I
Sbjct: 123 FPQPQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPV 182
Query: 196 SSVTGLGRDELL 207
S++ + D L+
Sbjct: 183 SALHKINIDSLI 194
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 36.4 bits (83), Expect = 0.001
Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 9/173 (5%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLV-NKSWYIVDLPGYGFAKAPD 102
LG S VGK++ + K G + + +
Sbjct: 10 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLW 69
Query: 103 VT--RMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
T + + S T +F + G LL+ D + +++ + N
Sbjct: 70 DTAGQERFRSLTTAFFRDAM---GFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 126
Query: 161 DKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
K + + N + ++L + + P+ TS+ TG ++ + + L
Sbjct: 127 IGNKADLPDQREVNERQARELADK---YGIPYFETSAATGQNVEKAVETLLDL 176
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 36.4 bits (83), Expect = 0.001
Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 16/170 (9%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
I+G + VGKS L+ K+ + G ++ + +
Sbjct: 8 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTA------- 60
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKID-LDCANWLGRNNIPLTFVFTKCDK 162
+ + S T+ Y+ + V + L+ A +N+ + + K D
Sbjct: 61 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL 120
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+R ++ H ++ TS+ T +E ++ ++
Sbjct: 121 ESRRDVKR--------EEGEAFAREHGLIFMETSAKTACNVEEAFINTAK 162
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 36.2 bits (82), Expect = 0.001
Identities = 23/179 (12%), Positives = 50/179 (27%), Gaps = 15/179 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G VGKS+L ++ ++ + + + L G +
Sbjct: 9 LVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFG 68
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + + + + K+ R++ P+ V K D
Sbjct: 69 AMREQYMRAGHGFLLVFA------INDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKAD 122
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHM-SQLRNYWDQ 219
+ + HH + S+ L DE + +R Y +Q
Sbjct: 123 --------LESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 173
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 35.3 bits (80), Expect = 0.002
Identities = 21/169 (12%), Positives = 52/169 (30%), Gaps = 15/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG GK++++ L + +T+ + N + + D+ G D
Sbjct: 17 MLGLDAAGKTTILYKLKLGQS--VTTIPTVGFNVETVTYKNVKFNVWDVGGQ------DK 68
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
R W + G G++ ++D + + + N+ +
Sbjct: 69 IRPLWRHYYTGTQ-------GLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFAN 121
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K + + + + + + +G G E L ++
Sbjct: 122 KQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTS 170
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 35.4 bits (80), Expect = 0.002
Identities = 17/171 (9%), Positives = 44/171 (25%), Gaps = 18/171 (10%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGY---GFAKA 100
++G VGK+ L+ + K + + + + + + + +
Sbjct: 8 VVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRL 67
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
++ F + + S +V + + + P V T+
Sbjct: 68 RPLSYPQTDVFLVCFSVVSPSSF-------ENVKEKWVPEITHHC---PKTPFLLVGTQI 117
Query: 161 DKMKVAKGRRPDENIKSFQQLIRE-----NYPHHPPWIMTSSVTGLGRDEL 206
D K ++ S++T G +
Sbjct: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 35.0 bits (79), Expect = 0.003
Identities = 17/169 (10%), Positives = 46/169 (27%), Gaps = 14/169 (8%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG + VGKSS++ V + G + + + +
Sbjct: 9 LLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA------- 61
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDKM 163
+ + Y+ + + V + + + + +
Sbjct: 62 GLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 121
Query: 164 KVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ + H ++ TS+ + +EL + +S+
Sbjct: 122 TDVREVMERDAKDYADS-------IHAIFVETSAKNAININELFIEISR 163
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 35.0 bits (79), Expect = 0.003
Identities = 29/171 (16%), Positives = 49/171 (28%), Gaps = 13/171 (7%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
A+ G VGKSSL+ V+ T + G + P
Sbjct: 6 AVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPA 65
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ R+ S + L + C +IP+ V KCD+
Sbjct: 66 MQRLSI-SKGHAFILVYSITSR----QSLEELKPIYEQICEIKGDVESIPIMLVGNKCDE 120
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQL 213
+ + + + L R ++ TS+ EL + L
Sbjct: 121 SPSREVQSSE-----AEALART---WKCAFMETSAKLNHNVKELFQELLNL 163
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 34.7 bits (78), Expect = 0.004
Identities = 25/172 (14%), Positives = 52/172 (30%), Gaps = 12/172 (6%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
ILG S VGK+SL+N V KK G L +V+ + + +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 64
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + +L+ D + P LD
Sbjct: 65 QSLGVAFYRGAD----------CCVLVFDVTAPNTFKTLDSWRDEFLIQAS-PRDPENFP 113
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHH-PPWIMTSSVTGLGRDELLLHMSQ 212
+ + + + ++ Y + P+ TS+ + ++ +++
Sbjct: 114 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 34.5 bits (78), Expect = 0.004
Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 12/170 (7%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG VGKSSL+N V K G L V+ + + +
Sbjct: 11 LLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA------- 63
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLID-ASVPPQKIDLDCANWLGRNNIPLTFVFTKCDK 162
+ + S ++ + + + D S + P +F F
Sbjct: 64 GQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGN 123
Query: 163 MKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
R+ + Q R+N P+ TS+ +
Sbjct: 124 KIDISERQVST--EEAQAWCRDN--GDYPYFETSAKDATNVAAAFEEAVR 169
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 34.7 bits (78), Expect = 0.004
Identities = 19/171 (11%), Positives = 46/171 (26%), Gaps = 11/171 (6%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G VGKS+L N + + + L+ + +
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKG 65
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + G + + ++ + +IP+ V K D
Sbjct: 66 ENEWLHDHCMQVGDAYLIVYSITD---RASFEKASELRIQLRRARQTEDIPIILVGNKSD 122
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
++ + + + +I TS+ EL + +
Sbjct: 123 LVRCREVSVSEGRACAVV--------FDCKFIETSAAVQHNVKELFEGIVR 165
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 35.2 bits (80), Expect = 0.004
Identities = 27/218 (12%), Positives = 51/218 (23%), Gaps = 54/218 (24%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPD 102
+ G GKS+ + A L K + + + D
Sbjct: 58 GVTGTPGAGKSTFLEAFGM--LLIREGLKVAV--IAVDPSSPVTGGSI---------LGD 104
Query: 103 VTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANW----------------- 145
TRM+ + + F+ G L + + A +
Sbjct: 105 KTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEV 164
Query: 146 --------------LGRN---------NIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLI 182
G + + V K D +S ++
Sbjct: 165 ARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHIL 224
Query: 183 RENYP-HHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
R Y P + S++ G DE+ + +
Sbjct: 225 RRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTA 262
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 34.9 bits (79), Expect = 0.004
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 43 AILGRSNVGKSSLINALVRKK 63
++G+ NVGKS+ +A
Sbjct: 4 GVVGKPNVGKSTFFSAATLVD 24
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 33.4 bits (75), Expect = 0.010
Identities = 23/171 (13%), Positives = 54/171 (31%), Gaps = 13/171 (7%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
+LG VGKS+L V+ + + + + + L G +
Sbjct: 6 LVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFT 65
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + +G+ L + Q + ++P+ V KCD
Sbjct: 66 AMRDLYM-KNGQGFALVYS-----ITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD 119
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ Q L R+ + ++ +S+ + + +E+ + +
Sbjct: 120 LE-----DERVVGKEQGQNLARQW--CNCAFLESSAKSKINVNEIFYDLVR 163
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 33.1 bits (74), Expect = 0.011
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 38 DRPEF--AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGY 95
+ P + ++G VGKS+L +K + + L + + N+ + L
Sbjct: 1 NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTA 60
Query: 96 GFAKAPDVTRMDW 108
G + +
Sbjct: 61 GQEEFSAMREQYM 73
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 33.4 bits (75), Expect = 0.011
Identities = 22/172 (12%), Positives = 49/172 (28%), Gaps = 16/172 (9%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G VGK+ L+ + ++ T ++ + L G
Sbjct: 12 CVVVGDGAVGKTCLLMSYANDA----FPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQ 67
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + V +V + + N+P + T+ D
Sbjct: 68 EDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA---PNVPFLLIGTQID 124
Query: 162 KMKVAKGRRPDENIKSF-------QQLIRENYPHHPPWIMTSSVTGLGRDEL 206
K ++K Q+L +E ++ S++T G +
Sbjct: 125 LRDDPKTLARLNDMKEKPICVEQGQKLAKEI--GACCYVECSALTQKGLKTV 174
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 33.0 bits (74), Expect = 0.014
Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 14/171 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
LG +VGK+SLI + G L + + L
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA---GQ 59
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ R S+ + +V + S +D +++ + V K D
Sbjct: 60 ERFRSLIPSYIRDSAAA---VVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD 116
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ +I+ ++ +E + +I TS+ G +L ++
Sbjct: 117 LAD-----KRQVSIEEGERKAKE---LNVMFIETSAKAGYNVKQLFRRVAA 159
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 32.8 bits (73), Expect = 0.016
Identities = 19/171 (11%), Positives = 44/171 (25%), Gaps = 15/171 (8%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
+LG VGKS+L ++ + + H +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVED-------GPEAEAAGHTYDRSIVVDGEEASLMVYDIW 56
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ W + +V + + ++ + +++P+ V K D
Sbjct: 57 EQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSD 116
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+ S + +I TS+ L + +
Sbjct: 117 LV--------RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVR 159
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 33.3 bits (75), Expect = 0.016
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 38 DRPEFAILGRSNVGKSSLINALVRKKEL 65
D P+ ++G + GKSS++ +V + L
Sbjct: 23 DLPQIVVVGSQSSGKSSVLENIVGRDFL 50
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 32.9 bits (74), Expect = 0.022
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 38 DRPEFAILGRSNVGKSSLINALVRKKEL 65
D P+ A++G + GKSS++ V + L
Sbjct: 25 DLPQIAVVGGQSAGKSSVLENFVGRDFL 52
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 32.0 bits (72), Expect = 0.036
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 43 AILGRSNVGKSSLINALVRKKELAL------TSKKPGKTQLINHFLVNKSWYIVDLPGY 95
+ G S VGKSSL+NA+ +L + + T + Y+VD PG+
Sbjct: 99 TMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPGF 157
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 31.5 bits (70), Expect = 0.038
Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 20/174 (11%)
Query: 42 FAILGRSNVGKSSLINALVRKK---ELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA 98
+LG VGK+SL+ K + T T+ +N + I D G
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAG---- 61
Query: 99 KAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFT 158
+ + + Y+ + G +L+ D + + +
Sbjct: 62 ------QERFHALGPIYYRDSN---GAILVYDIT-DEDSFQKVKNWVKELRKMLGNEICL 111
Query: 159 KCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
K+ + +I+ + TS+ G +EL L + +
Sbjct: 112 CIVGNKIDLEKERHVSIQEAESYAES---VGAKHYHTSAKQNKGIEELFLDLCK 162
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 31.8 bits (72), Expect = 0.046
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 44 ILGRSNVGKSSLINALVRKK 63
I+G NVGKS+L NAL +
Sbjct: 7 IVGLPNVGKSTLFNALTKAG 26
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 31.1 bits (69), Expect = 0.053
Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 17/175 (9%)
Query: 40 PEF--AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGF 97
PE +LG + GKSSLI+ + +K Q LV+ ++V +
Sbjct: 4 PELRLGVLGDARSGKSSLIHRFLTGSY--QVLEKTESEQYKKEMLVDGQTHLVLIREEAG 61
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
+ F+ +V L GR + L V
Sbjct: 62 --------APDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVG 113
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
T+ + D ++ + + T + GL D + ++Q
Sbjct: 114 TQDRISASSPRVVGDARARALCADM-----KRCSYYETCATYGLNVDRVFQEVAQ 163
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 31.1 bits (70), Expect = 0.061
Identities = 25/155 (16%), Positives = 44/155 (28%), Gaps = 42/155 (27%)
Query: 42 FAILGRSNVGKSSLINALVRK---------------KELALTSKKPGKTQLINHFLVNKS 86
+G + GK++L AL + A + G T H +
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 87 WY---IVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLV----GVLLLIDASVPPQKID 139
VD PG+ + + K N + G +L++ A+ P
Sbjct: 66 KRHYSHVDCPGH-------------ADYIK----NMITGAAQMDGAILVVSAADGPMPQT 108
Query: 140 LDCANWLGRNNIP-LTFVFTKCDKMKVAKGRRPDE 173
+ + +P + K D V D
Sbjct: 109 REHILLARQVGVPYIVVFMNKVD--MVDDPELLDL 141
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 31.3 bits (70), Expect = 0.062
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 43 AILGRSNVGKSSLINAL 59
I+G NVGKS+ A+
Sbjct: 14 GIVGMPNVGKSTFFRAI 30
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 31.1 bits (69), Expect = 0.069
Identities = 21/173 (12%), Positives = 44/173 (25%), Gaps = 23/173 (13%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
ILG GK++++ L + T N ++ +++ G
Sbjct: 22 ILGLDGAGKTTILYRLQIGE-----VVTTKPTIGFNVETLSYKNLKLNVWDLGG---QTS 73
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGR----NNIPLTFVFTK 159
R W + ++ + + L + +
Sbjct: 74 IRPYWRCYYADTA---------AVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVF 124
Query: 160 CDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQ 212
+K E K E + +S++ G G E L +
Sbjct: 125 ANKQDQPGALSASEVSKELNL--VELKDRSWSIVASSAIKGEGITEGLDWLID 175
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 30.7 bits (68), Expect = 0.080
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 40 PEFAILGRSNVGKSSLINALVRK 62
P A S GK++L+ L+
Sbjct: 3 PLLAFAAWSGTGKTTLLKKLIPA 25
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 30.5 bits (67), Expect = 0.088
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 43 AILGRSNVGKSSLINALVRKK 63
AILG +VGKSSL V +
Sbjct: 8 AILGYRSVGKSSLTIQFVEGQ 28
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 30.6 bits (68), Expect = 0.096
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 42 FAILGRSNVGKSSLINALVRK 62
+ ++G + GK++L+ V
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAA 24
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 30.7 bits (68), Expect = 0.097
Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 23/184 (12%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G + GK++L AL + + I + I P G
Sbjct: 8 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRG---ITIKIGFADAEIRRCPNCGRYSTS 64
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLI------------------DASVPPQKIDLDCA 143
V ++ G L+ P+ +
Sbjct: 65 PVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHL 124
Query: 144 NWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGR 203
L + K+++ + EN + ++ I + P I S++ G
Sbjct: 125 MALQIIGQKNIIIAQN--KIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANI 182
Query: 204 DELL 207
D L+
Sbjct: 183 DVLV 186
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 31.0 bits (68), Expect = 0.11
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 5/154 (3%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFL-VNKSWYIVDLPGYGFAKA 100
I+G++ GKSSL++A+ + L K + F V +DL
Sbjct: 26 NLIIGQNGSGKSSLLDAI----LVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTK 81
Query: 101 PDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKC 160
+TR ++ G + LVG + I + N +
Sbjct: 82 YRITRRFLKGYSSGEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQG 141
Query: 161 DKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIM 194
+ + E + + + +
Sbjct: 142 QIDAILESDEAREKVVREVLNLDKFETAYKKLSE 175
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 30.4 bits (67), Expect = 0.12
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 42 FAILGRSNVGKSSLINALVRKK 63
AI GR+ VGKS+L+ + K+
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKR 26
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.0 bits (66), Expect = 0.14
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 44 ILGRSNVGKSSLINALVRKK 63
++G S GK++L++ +
Sbjct: 7 VVGDSQCGKTALLHVFAKDC 26
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 30.1 bits (67), Expect = 0.16
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 43 AILGRSNVGKSSLINALVRKKELA--LTSKKPGK----TQLINHFLVNKSWYIVDLPGYG 96
G+S VGKSSL+NA+ + L S+ G+ T+ + + + D PG+
Sbjct: 101 VFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGL-VADTPGFS 159
Query: 97 FAK 99
+
Sbjct: 160 SLE 162
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 29.6 bits (65), Expect = 0.22
Identities = 12/117 (10%), Positives = 24/117 (20%), Gaps = 25/117 (21%)
Query: 116 FLNRESLVGVLLLIDASVP--PQKID---LDCANWLGRNNIPLTFVFTKCDKMKVAKGRR 170
+ V+ + D + P R K D + + R
Sbjct: 118 LMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKER 177
Query: 171 PDENIKSFQQLIR--------------------ENYPHHPPWIMTSSVTGLGRDELL 207
+ + L + S+ T G ++L
Sbjct: 178 HRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLE 234
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 29.7 bits (65), Expect = 0.22
Identities = 23/157 (14%), Positives = 40/157 (25%), Gaps = 6/157 (3%)
Query: 39 RPEF----AILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPG 94
RP F AILG + GKS L+N L TS + + L +
Sbjct: 3 RPFFAKTVAILGGESSGKSVLVNKL--AAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDY 60
Query: 95 YGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLT 154
A + + LD ++ +
Sbjct: 61 PQMALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTIL 120
Query: 155 FVFTKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPP 191
+ + + FQQL+++ +
Sbjct: 121 LKNNTEWVDDGLRSLGSQKQRQQFQQLLKKLLDKYKV 157
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 29.8 bits (67), Expect = 0.22
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
A G S GKS++ + L R
Sbjct: 31 IAFAGPSGGGKSTIFSLLER 50
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 29.4 bits (66), Expect = 0.26
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 42 FAILGRSNVGKSSLINALVR 61
A +G S GKS+LIN + R
Sbjct: 47 VAFVGMSGGGKSTLINLIPR 66
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 29.5 bits (66), Expect = 0.27
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 42 FAILGRSNVGKSSLINALVR 61
AI G + GK+SL+ ++
Sbjct: 65 LAITGSTGSGKTSLLMLILG 84
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 29.0 bits (65), Expect = 0.33
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 42 FAILGRSNVGKSSLINALVR 61
A++GRS GKS++ + + R
Sbjct: 44 VALVGRSGSGKSTIASLITR 63
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.6 bits (63), Expect = 0.43
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 42 FAILGRSNVGKSSLINALVRKKEL 65
+ + S GKSSLI AL++ + L
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPL 28
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 28.7 bits (64), Expect = 0.44
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 42 FAILGRSNVGKSSLINALVR 61
I+GRS GKS+L + R
Sbjct: 32 IGIVGRSGSGKSTLTKLIQR 51
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 28.8 bits (63), Expect = 0.46
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 44 ILGRSNVGKSSLINALVRKK 63
+LG GKS+ I +
Sbjct: 7 LLGTGESGKSTFIKQMRIIH 26
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 28.7 bits (64), Expect = 0.46
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
A++G + GKS++ L
Sbjct: 43 TALVGPNGSGKSTVAALLQN 62
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 28.4 bits (62), Expect = 0.53
Identities = 8/74 (10%), Positives = 17/74 (22%), Gaps = 9/74 (12%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+LG GKS+++ + E I + G ++
Sbjct: 7 LLGAGESGKSTIVKQMKIIHEA---------GTGIVETHFTFKDLHFKMFDVGGQRSERK 57
Query: 104 TRMDWSSFTKGYFL 117
+
Sbjct: 58 KWIHCFEGVTAIIF 71
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 28.4 bits (63), Expect = 0.55
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 11/62 (17%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKK-----------PGKTQLINHFLVNKSWYIVD 91
+ GRS +GKS L+ K L + ++ F+ + I++
Sbjct: 19 LLTGRSGIGKSECALDLINKNHLFVGDDAIEIYRLGNRLFGRAQEVAKKFMEIRGLGIIN 78
Query: 92 LP 93
+
Sbjct: 79 VE 80
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.3 bits (62), Expect = 0.58
Identities = 20/155 (12%), Positives = 43/155 (27%), Gaps = 15/155 (9%)
Query: 44 ILGRSNVGKSSLINALVRKKELAL------TSKKPGKTQLINHFLVNKSWYIVDLPGYGF 97
+LG VG+ + N L+ K T++ P K + S +
Sbjct: 8 LLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNN 67
Query: 98 AKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVF 157
+ D TK + + G++ ++D +
Sbjct: 68 EYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDV---------EPQALKVLRTAEFAPFV 118
Query: 158 TKCDKMKVAKGRRPDENIKSFQQLIRENYPHHPPW 192
+ G DE+++ Q+ + +
Sbjct: 119 VFIAAPTITPGLNEDESLQRLQKESDILQRTYAHY 153
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 28.3 bits (62), Expect = 0.62
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 44 ILGRSNVGKSSLINAL 59
+LG GKS+ + +
Sbjct: 7 LLGAGESGKSTFLKQM 22
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 28.5 bits (63), Expect = 0.64
Identities = 22/173 (12%), Positives = 52/173 (30%), Gaps = 29/173 (16%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLI----------------------- 78
+++ + GKS+L ++LV++ +++ K G+ +
Sbjct: 20 MSVIAHVDHGKSTLTDSLVQRAG-IISAAKAGEARFTDTRKDEQERGITIKSTAISLYSE 78
Query: 79 -NHFLVNKSWYIVDLPGYGFAKAPDVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQK 137
+ V + D + +D+SS G L+++D
Sbjct: 79 MSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTA---ALRVTDGALVVVDTIEGVCV 135
Query: 138 IDLDCANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKSFQQLIRE-NYPHH 189
I V K D+ + ++ ++F + + N
Sbjct: 136 QTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVS 188
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 28.2 bits (61), Expect = 0.82
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 38 DRPEFAILGRSNVGKSSLINALVR 61
I+G++ GKSSL++A++
Sbjct: 22 KEGINLIIGQNGSGKSSLLDAILV 45
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 27.8 bits (61), Expect = 0.92
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 44 ILGRSNVGKSSLINALVRKK 63
+LG GKS+++ +
Sbjct: 11 LLGAGESGKSTIVKQMRILH 30
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 27.6 bits (60), Expect = 0.97
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 43 AILGRSNVGKSSLINALVR 61
I G VGK++L+ +V
Sbjct: 4 IITGEPGVGKTTLVKKIVE 22
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 27.5 bits (60), Expect = 1.1
Identities = 23/200 (11%), Positives = 52/200 (26%), Gaps = 36/200 (18%)
Query: 42 FAILGRSNVGKSSLINAL------VRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGY 95
+G + GKS+L + V K+ + ++ + + +L +
Sbjct: 27 IVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREK 86
Query: 96 GFAKAPDVTRMDWSSFTKGYFLNRESL-------------VGVLLLIDASVPPQKIDLDC 142
G + +L+I A + +
Sbjct: 87 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFER 146
Query: 143 ----------ANWLGRNNIPLTFVFTKCDKMKVAKGRRPDENIKS-----FQQLIRENYP 187
A G N++ V K D+ V + +++ N
Sbjct: 147 GGQTREHAVLARTQGINHLV--VVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSK 204
Query: 188 HHPPWIMTSSVTGLGRDELL 207
++ S+ TG + +
Sbjct: 205 TDVKYMPVSAYTGQNVKDRV 224
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 27.6 bits (61), Expect = 1.1
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 42 FAILGRSNVGKSSLINALVR 61
G + +GK++L+ +
Sbjct: 30 VNFHGPNGIGKTTLLKTIST 49
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 27.2 bits (59), Expect = 1.4
Identities = 4/26 (15%), Positives = 14/26 (53%)
Query: 34 CPKDDRPEFAILGRSNVGKSSLINAL 59
++ + + + +VG+S ++N +
Sbjct: 168 LDEEQDRDLSYIKIMDVGQSYVVNRV 193
Score = 26.9 bits (58), Expect = 1.8
Identities = 15/147 (10%), Positives = 40/147 (27%), Gaps = 2/147 (1%)
Query: 42 FAILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAP 101
++G GK+ + L R + + K++ + +
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLN-FIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGL 63
Query: 102 DVTRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGRNNIPLTFVFTKCD 161
+ + + G + + DA+ ++ N+ +N FV + C
Sbjct: 64 KIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICV 123
Query: 162 KMKVAKGRRPDENIKSFQQLIRENYPH 188
+V + + +
Sbjct: 124 DPEVIA-ANIVQVKLGSPDYVNRDSDE 149
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 27.2 bits (60), Expect = 1.4
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
++G + GKS+L+ +
Sbjct: 28 LHLVGPNGAGKSTLLARMAG 47
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.2 bits (59), Expect = 1.5
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 39 RPEFAILGRSNVGKSSLINALVRKKELALTSKKPGKTQ 76
RP I G S GKS+L+ L + + T+
Sbjct: 2 RP-IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTR 38
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.8 bits (58), Expect = 1.6
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query: 39 RPEFAILGRSNVGKSSLINALVRK 62
RP + G S GKS+L+ L ++
Sbjct: 1 RP-VVLSGPSGAGKSTLLKKLFQE 23
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 26.9 bits (59), Expect = 1.6
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 42 FAILGRSNVGKSSLINALVR 61
+LG + GKS + +
Sbjct: 27 CVLLGPTGAGKSVFLELIAG 46
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 26.7 bits (59), Expect = 1.9
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 42 FAILGRSNVGKSSLINALVR 61
+LG S GK++ + +
Sbjct: 35 LVLLGPSGCGKTTTLRMIAG 54
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 26.9 bits (58), Expect = 2.0
Identities = 14/178 (7%), Positives = 39/178 (21%), Gaps = 6/178 (3%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPDV 103
+ S +GKS+ + + A K ++ + + ++ L + D
Sbjct: 40 VTSGSGMGKSTFVRQQALQWGTA--MGKKVGLAMLEESVEETAEDLIGLHNRVRLRQSDS 97
Query: 104 TRMDWSSFTKGYFLNRESLVGVLLLIDASVPPQKIDLDCANWLGR----NNIPLTFVFTK 159
+ + K E + S + D A +
Sbjct: 98 LKREIIENGKFDQWFDELFGNDTFHLYDSFAEAETDRLLAKLAYMRSGLGCDVIILDHIS 157
Query: 160 CDKMKVAKGRRPDENIKSFQQLIRENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYW 217
+ +L ++ + + + +
Sbjct: 158 IVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICHLKNPDKGKAHEEGRPVSITD 215
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.8 bits (59), Expect = 2.1
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 42 FAILGRSNVGKSSLINALVR 61
+G S GKS+L+ +
Sbjct: 29 VVFVGPSGCGKSTLLRMIAG 48
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 26.6 bits (58), Expect = 2.1
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 42 FAILGRSNVGKSSLINALVR 61
F ILG + GK+ + +
Sbjct: 29 FVILGPTGAGKTLFLELIAG 48
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 26.6 bits (57), Expect = 2.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 43 AILGRSNVGKSSLINALVRKKE 64
+LG GKSS+I + +
Sbjct: 33 LVLGLRRTGKSSIIKIGINELN 54
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 26.7 bits (59), Expect = 2.2
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
+I+G S GKS+ + +
Sbjct: 31 ISIIGSSGSGKSTFLRCINF 50
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 26.4 bits (58), Expect = 2.3
Identities = 4/20 (20%), Positives = 12/20 (60%)
Query: 42 FAILGRSNVGKSSLINALVR 61
++G + GK++ ++A+
Sbjct: 35 VTLIGANGAGKTTTLSAIAG 54
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 26.5 bits (58), Expect = 2.3
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
F ++G + GK++ + +
Sbjct: 31 FGLIGPNGAGKTTTLRIIST 50
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 26.4 bits (58), Expect = 2.3
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 42 FAILGRSNVGKSSLINALVR 61
+LG S GK++ + +
Sbjct: 32 MILLGPSGCGKTTTLRMIAG 51
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 26.5 bits (58), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 42 FAILGRSNVGKSSLINAL 59
I+G + GKS+LIN +
Sbjct: 33 TLIIGPNGSGKSTLINVI 50
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 26.6 bits (58), Expect = 2.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 42 FAILGRSNVGKSSLINALVR 61
F ILG S GK++ + +
Sbjct: 34 FGILGPSGAGKTTFMRIIAG 53
>d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 25.7 bits (56), Expect = 2.7
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 184 ENYPHHPPWIMTSSVTGLGRDELLLHMSQLRNYWDQ 219
YPH P I + GL +++ + L +
Sbjct: 62 AEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKA 97
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 26.0 bits (57), Expect = 3.1
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
Query: 43 AILGRSNVGKSSLINALVRKK------ELALTSKKPGKT------QLINHFLVNKSWYIV 90
I G S VGKS LV++ + ++ +T +++H L + I+
Sbjct: 18 LITGDSGVGKSETALELVQRGHRLIADDRVDVYQQDEQTIVGAAPPILSHLLEIRGLGII 77
Query: 91 DLP 93
D+
Sbjct: 78 DVM 80
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 25.3 bits (55), Expect = 5.1
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 13/79 (16%)
Query: 43 AILGRSNVGKSSLINALVRKKELALTSKK------------PGKTQLINHFLVNKSWYIV 90
I G S +GKS L+++ + +LI H L + I+
Sbjct: 19 LITGDSGIGKSETALELIKRGHRLVADDNVEIREISKDELIGRAPKLIEHLLEIRGLGII 78
Query: 91 DLP-GYGFAKAPDVTRMDW 108
++ +G R+
Sbjct: 79 NVMTLFGAGSILTEKRLRL 97
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator
(NarL), receiver domain {Escherichia coli [TaxId: 562]}
Length = 138
Score = 24.8 bits (54), Expect = 5.5
Identities = 5/29 (17%), Positives = 8/29 (27%)
Query: 169 RRPDENIKSFQQLIRENYPHHPPWIMTSS 197
P N +RE + + S
Sbjct: 57 NMPGMNGLETLDKLREKSLSGRIVVFSVS 85
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 25.0 bits (54), Expect = 7.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 43 AILGRSNVGKSSLINALVRKKE 64
AI+G GKS L+N L KK+
Sbjct: 36 AIVGLYRTGKSYLMNKLAGKKK 57
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 123
Score = 24.4 bits (53), Expect = 7.5
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 171 PDENIKSFQQLIRENYPHHPPWIMTSS 197
P + + + IR + H P IM ++
Sbjct: 58 PHLDGLAVLERIRAGFEHQPNVIMLTA 84
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 25.0 bits (53), Expect = 7.9
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 44 ILGRSNVGKSSLINALVRKKELALTSKKPGKTQLINHFLVNKSWYIVDLPG 94
+ G VGK++LI+ + + T+ + + +V L G
Sbjct: 6 LTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSG 56
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 24.9 bits (53), Expect = 8.4
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 35 PKDDRPE-FAILGRSNVGKSSLINALVR 61
P+D P + G + GKS L+ L
Sbjct: 45 PRDAEPRHLLVNGATGTGKSVLLRELAY 72
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.425
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 847,368
Number of extensions: 37370
Number of successful extensions: 291
Number of sequences better than 10.0: 1
Number of HSP's gapped: 232
Number of HSP's successfully gapped: 130
Length of query: 219
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 137
Effective length of database: 1,281,736
Effective search space: 175597832
Effective search space used: 175597832
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.4 bits)