Query 027761
Match_columns 219
No_of_seqs 200 out of 768
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 14:46:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027761.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027761hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02510 probable 1-acyl-sn-gl 100.0 1.9E-54 4.1E-59 398.7 21.1 211 7-217 159-374 (374)
2 PLN02380 1-acyl-sn-glycerol-3- 100.0 4.6E-45 9.9E-50 336.6 22.2 183 6-189 150-343 (376)
3 KOG1505 Lysophosphatidic acid 100.0 1.5E-42 3.2E-47 316.8 22.5 176 12-187 145-331 (346)
4 PRK14014 putative acyltransfer 100.0 8.3E-30 1.8E-34 229.1 12.6 127 4-139 160-297 (301)
5 cd07990 LPLAT_LCLAT1-like Lyso 99.9 3E-22 6.5E-27 167.8 10.7 98 6-103 90-193 (193)
6 KOG2976 Protein involved in au 60.2 16 0.00035 32.9 4.6 89 43-131 28-134 (278)
7 PF06198 DUF999: Protein of un 50.0 1.3E+02 0.0028 24.0 8.0 30 114-143 52-81 (143)
8 COG3224 Uncharacterized protei 27.2 2.2E+02 0.0048 24.5 6.2 16 157-172 122-137 (195)
9 KOG3386 Copper transporter [In 26.8 3.6E+02 0.0079 22.2 8.4 28 177-204 116-143 (155)
10 COG0777 AccD Acetyl-CoA carbox 26.2 81 0.0018 28.8 3.5 44 30-80 182-225 (294)
11 PF12062 HSNSD: heparan sulfat 26.0 63 0.0014 31.6 3.0 90 30-119 379-479 (487)
12 PF10724 DUF2516: Protein of u 24.5 1.7E+02 0.0037 22.5 4.6 12 191-202 77-88 (100)
13 COG2832 Uncharacterized protei 23.4 3.9E+02 0.0084 21.3 7.7 30 113-143 42-71 (119)
14 KOG2741 Dimeric dihydrodiol de 23.3 88 0.0019 29.4 3.3 36 31-73 42-77 (351)
15 PF01988 VIT1: VIT family; In 22.5 4.8E+02 0.01 22.1 9.2 22 151-172 131-154 (213)
16 PF10087 DUF2325: Uncharacteri 22.1 2.2E+02 0.0048 20.8 4.8 37 26-66 58-94 (97)
17 COG1636 Uncharacterized protei 21.8 84 0.0018 27.3 2.7 50 31-81 98-148 (204)
18 PF04800 ETC_C1_NDUFA4: ETC co 20.6 54 0.0012 25.3 1.1 26 30-57 56-81 (101)
19 COG4920 Predicted membrane pro 20.1 3.4E+02 0.0073 24.0 6.0 35 173-207 25-59 (249)
No 1
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=1.9e-54 Score=398.72 Aligned_cols=211 Identities=57% Similarity=0.955 Sum_probs=198.9
Q ss_pred hhhhhhhcc--CCceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEecC
Q 027761 7 KKVSCFLHT--HFEIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKN 81 (219)
Q Consensus 7 ~~~~c~~~~--~~~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~~ 81 (219)
.+..+...+ ..|+++++|+ |+|++++++|+++|+++|+|+++|+|+||++||..+++.|++++++|||+||+|++
T Consensus 159 l~~~l~~lk~~~~~~~LvIFPEGTR~t~~~~~~s~~~A~k~glPil~~vL~PRt~Gf~~~l~~L~~~l~~IyDvTi~Y~~ 238 (374)
T PLN02510 159 IRQMLSSFKDPRDPLWLALFPEGTDYTEAKCQRSQKFAAEHGLPILNNVLLPKTKGFVSCLQELRCSLDAVYDVTIGYKH 238 (374)
T ss_pred HHHHHHHHhccCCCcEEEEeCCcCCCCccccchHHHHHHHcCCCcceeEEcCccccHHHHHHHHHHHHHhheeEEEEeCC
Confidence 344443333 5678999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhhccCCCCceEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchhhhHHHHHH
Q 027761 82 PCPSFMDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQENELSTLKCLVNFIV 161 (219)
Q Consensus 82 ~~Ps~~~~l~G~~p~~Vhihvrr~pi~~iP~~e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~~~~~~l~~~~~ 161 (219)
+.|++++++.|..|.+|||||||+|+++||++++++++||+++|+|||++|++|+++|+||+++.+++++.+++|+|+++
T Consensus 239 ~~Ps~~~~~~g~~p~~vhihvrr~pi~~iP~~~~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~~~~~~l~~~~~ 318 (374)
T PLN02510 239 RCPSFLDNVFGIDPSEVHIHIRRIPLKQIPTSEDEVSAWLMDRFQLKDQLLSDFYAQGHFPNEGTEGELSTLKCLANFLA 318 (374)
T ss_pred CCCCHHHHhcCCCCcEEEEEEEEEECccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCCccchhhHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999988777777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeeccceecccchhhhhhhc
Q 027761 162 VISLTAIFTYLTLFSSIWYKIYVGLACTSLASVTYFNIHPMLVVGFSKAMFCCKKT 217 (219)
Q Consensus 162 w~~l~~~~~yl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (219)
|++++.+++|++++|+.||++|+.++|+|++++|+|||||+|++++.++..+.||+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T PLN02510 319 VIALTTVFTYLTLFSSVWFKIYVSLSCAYLTSATHFNWRPPPLIESLENSLKLVNK 374 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccchhchhccCC
Confidence 99999999999999999999999999999999999999999999999999988874
No 2
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase
Probab=100.00 E-value=4.6e-45 Score=336.60 Aligned_cols=183 Identities=30% Similarity=0.453 Sum_probs=161.3
Q ss_pred hhhhhhhhccC--CceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEec
Q 027761 6 NKKVSCFLHTH--FEIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYK 80 (219)
Q Consensus 6 ~~~~~c~~~~~--~~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~ 80 (219)
..+.++...+. .+.++++|+ |+|++++++|++||+++|+|+++|||+|||+||..+++.|++.+++|||+||+|+
T Consensus 150 ~l~~~~~~l~~~~~~~wllIFPEGTR~~~~k~~~s~~fA~~~glP~l~hvL~PRt~Gf~~~l~~L~~~~~aiyDvTi~y~ 229 (376)
T PLN02380 150 TLKSGFQRLKDFPRPFWLALFVEGTRFTQAKLLAAQEYAASRGLPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDVTVAVP 229 (376)
T ss_pred HHHHHHHHHhhCCCccEEEEecCcCCCCchhhHHHHHHHHHcCCCCcccccCcccccHHHHHHHhhhcccEEEEEEEEec
Confidence 34556655555 467899999 9999999999999999999999999999999999999999999999999999998
Q ss_pred CC--CCCchhhccCCCCceEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCccchhhhHHH
Q 027761 81 NP--CPSFMDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQENELSTLKCLVN 158 (219)
Q Consensus 81 ~~--~Ps~~~~l~G~~p~~Vhihvrr~pi~~iP~~e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~~~~~~l~~ 158 (219)
++ .|++++++.| +|.+||+||||+|++++|++++++++||+++|+|||++||+|+++|+||++...+.-+++++|+|
T Consensus 230 ~~~~~psl~~il~g-~p~~v~v~vrr~pi~~iP~~~~~~~~WL~~~w~eKD~lle~~~~~g~F~~~~~~~~~~~~~~l~~ 308 (376)
T PLN02380 230 KGQPAPTMLRIFRG-QSSVVHVHIKRHSMKELPETDDGIAQWCKDVFVAKDALLDKHFAEDTFGDQEYQDIGRPKKSLIV 308 (376)
T ss_pred CCCCCccHHHHhCC-CCeEEEEEEEEEECCcCcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCCchHHHH
Confidence 75 3789999988 79999999999999999999999999999999999999999999999998754433367899999
Q ss_pred HHHHH--HHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 027761 159 FIVVI--SLTAIFTYL--TLFSSIWYKIYVGLACT 189 (219)
Q Consensus 159 ~~~w~--~l~~~~~yl--~l~~~~~~~~~~~~~~~ 189 (219)
+++|+ .+.++++|+ ++++|+|..+.+.++++
T Consensus 309 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (376)
T PLN02380 309 VISWACLLILGAIKFLQWLSLLSSWKGIASLAAGL 343 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99998 557788888 67888998776655544
No 3
>KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=316.77 Aligned_cols=176 Identities=44% Similarity=0.721 Sum_probs=150.5
Q ss_pred hhccCCceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEecCCCCC---
Q 027761 12 FLHTHFEIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYKNPCPS--- 85 (219)
Q Consensus 12 ~~~~~~~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~~~~Ps--- 85 (219)
.+....|.++++|+ |||++++++|++||+|+|+|.++|||+||||||.++++.||+.+++|||+||+|++..|+
T Consensus 145 l~~~~~~~wLlLFPEGT~~~~~~~~~S~~fa~k~GLp~l~nvLlPRt~Gf~~~l~~lr~~l~~IyD~Ti~y~~~~~~~~~ 224 (346)
T KOG1505|consen 145 LKDSPDPYWLLLFPEGTRFTEKKHERSQEFAAKNGLPHLKNVLLPRTKGFKAALEELRNSLDAIYDVTIGYSKAEPPPYE 224 (346)
T ss_pred hccCCCceEEEEecCCCcccHHHHHHHHHHHHHcCCCCccceeccCcchHHHHHHHhcCCCceEEEEEEecCCCCCCchh
Confidence 44557788999999 999999999999999999999999999999999999999999999999999999986543
Q ss_pred chhhccCCCCceEEEEEEEEeCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-chhhhHHHHHHHH-
Q 027761 86 FMDNVFGVDPSEVHIHVRRIPVKEIPASETDAAAWLMDAFQLKDQLLDKFNAQGHFPNQCQENEL-STLKCLVNFIVVI- 163 (219)
Q Consensus 86 ~~~~l~G~~p~~Vhihvrr~pi~~iP~~e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~~~~~~~~-~~~~~l~~~~~w~- 163 (219)
.+..+.|..|.++|+|+||+|+++||+||+++++||+++|+|||++|++||++|+||++..+.+. ++.+++.++.+|.
T Consensus 225 ~~~~~~~~~~~~v~ihirr~pi~~IP~de~~~~~WL~~~f~~KDkll~~fy~tg~f~~~~~e~~~~~~~~~l~~~~~~~~ 304 (346)
T KOG1505|consen 225 TMLFLLGGEPKEVHIHIRRFPIKEIPEDEEELANWLYDRFEEKDKLLEEFYETGSFPGIAPEVPFNRRIKTLVLTLFWAL 304 (346)
T ss_pred hheeeccCCCceeEEEEEecccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCccchhhhhHHHhHHH
Confidence 44445566999999999999999999999999999999999999999999999999997333333 5778999999998
Q ss_pred -HHHHHHHHH--HHHHHHHHHHHHHHH
Q 027761 164 -SLTAIFTYL--TLFSSIWYKIYVGLA 187 (219)
Q Consensus 164 -~l~~~~~yl--~l~~~~~~~~~~~~~ 187 (219)
.+.+++.|+ .+..++|..+...+.
T Consensus 305 ~~~~~~f~~~~~~~~~~~~~~~~~~~~ 331 (346)
T KOG1505|consen 305 KLLIPLFSYLIGLLNVGSWLKLIIFSY 331 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456766666 334466665544333
No 4
>PRK14014 putative acyltransferase; Provisional
Probab=99.96 E-value=8.3e-30 Score=229.13 Aligned_cols=127 Identities=28% Similarity=0.479 Sum_probs=118.4
Q ss_pred hhhhhhhhhhccCCceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEec
Q 027761 4 IFNKKVSCFLHTHFEIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYK 80 (219)
Q Consensus 4 ~~~~~~~c~~~~~~~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~ 80 (219)
++.++.+|+..++.|.++++|+ |+|++++++|+ ++++|+|.||+|||.++++++++.+++||||||+|+
T Consensus 160 ~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~--------~~~~~lL~pk~ggf~~a~~~~~~~~~~I~dvti~y~ 231 (301)
T PRK14014 160 LETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQ--------SPYQHLLKPKAGGIAFALNAMGEQFDGLLDVTIVYP 231 (301)
T ss_pred HHHHHHHHHHHhcCCcEEEEeccceecCcccccccC--------CCcccccCCCCccHHHHHHhhhccCCEEEEEEEEeC
Confidence 5677889999999999999999 99999998865 779999999999999999999999999999999999
Q ss_pred CCCCCchhhccCCCCceEEEEEEEEeCCCCCCC--------hHHHHHHHHHHHHHHHHHHHHHHhCC
Q 027761 81 NPCPSFMDNVFGVDPSEVHIHVRRIPVKEIPAS--------ETDAAAWLMDAFQLKDQLLDKFNAQG 139 (219)
Q Consensus 81 ~~~Ps~~~~l~G~~p~~Vhihvrr~pi~~iP~~--------e~~~~~WL~~~w~eKD~lL~~f~~~g 139 (219)
++.|++++++.| .+.+||+||+++|++++|.+ ++++++||+++|+|||++|++|+++.
T Consensus 232 ~~~~~~~~~~~g-~~~~v~v~i~~~pi~~~~~~~y~~d~~~~~~~~~Wl~~~w~~Kd~~l~~~~~~~ 297 (301)
T PRK14014 232 DGRPSFWDLLSG-RVKKIVVHVRLLPIPEELIGDYFNDKEFRRRFQQWLNQLWQEKDQLIEQLLAQY 297 (301)
T ss_pred CCCCCHHHhhcC-CccEEEEEEEEEEcccccccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 988999999999 67899999999999999975 48899999999999999999999854
No 5
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins.
Probab=99.88 E-value=3e-22 Score=167.79 Aligned_cols=98 Identities=46% Similarity=0.703 Sum_probs=87.4
Q ss_pred hhhhhhhhccCC--ceEEEEEE---eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEec
Q 027761 6 NKKVSCFLHTHF--EIHILLYF---WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYK 80 (219)
Q Consensus 6 ~~~~~c~~~~~~--~~~~~~~~---RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~ 80 (219)
..+..|...+.. +.++++|+ |++++++++|++||+++|+|+++|||+||+|||.+++++|++.+++|||+||+|+
T Consensus 90 ~i~~~~~~l~~~~~~~~lviFPEGTr~~~~~~~~~~~~a~k~~~p~l~~vL~PR~~G~~~~~~~l~~~~~~v~Dvti~y~ 169 (193)
T cd07990 90 TIKRQLKRLKDSPEPFWLLIFPEGTRFTEEKKERSQEFAEKNGLPPLKHVLLPRTKGFVAILETLRDAVDAVYDVTIAYP 169 (193)
T ss_pred HHHHHHHHHhcCCCCcEEEEeCcccCCCHHHHHHHHHHHHHcCCCCcceeeCCCchHHHHHHHHHhcCCCeEEEEEEEec
Confidence 445667666665 88999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchh-hccCCCCceEEEEEE
Q 027761 81 NPCPSFMD-NVFGVDPSEVHIHVR 103 (219)
Q Consensus 81 ~~~Ps~~~-~l~G~~p~~Vhihvr 103 (219)
+..++.++ .+.|..|.+||+||+
T Consensus 170 ~~~~~~~~~~~~~~~~~~v~~~i~ 193 (193)
T cd07990 170 DGKPPSEQRLLLGGKPREVHVHVR 193 (193)
T ss_pred CCCCchhhhhccCCCCCEEEEEEC
Confidence 88766555 556669999999985
No 6
>KOG2976 consensus Protein involved in autophagy and nutrient starvation [Posttranslational modification, protein turnover, chaperones]
Probab=60.18 E-value=16 Score=32.87 Aligned_cols=89 Identities=17% Similarity=0.348 Sum_probs=64.0
Q ss_pred CCCCCccccccCchhHHHHHHHhhcccCe---EEEEE---EEecCC-----CCC--chhhccCCC---CceEEEEEEEEe
Q 027761 43 GLPVLTNVLLPKTRGFCLCLETLRNTLDA---VYDMT---IAYKNP-----CPS--FMDNVFGVD---PSEVHIHVRRIP 106 (219)
Q Consensus 43 gLP~lkhvL~PRtkGf~~~l~~Lr~~~~a---VyDvT---iaY~~~-----~Ps--~~~~l~G~~---p~~Vhihvrr~p 106 (219)
+.|..-++|.||.+=++.+++...+.+.. --+++ +-|.+. .|. +.|+++|.. +-.+.+|.+.+|
T Consensus 28 ~e~~p~~~~~PR~sYL~l~ip~V~~~fk~~l~~~~lse~WfeynG~PLKW~~PvGvLFDlL~~~~~~~~w~i~v~~~~~P 107 (278)
T KOG2976|consen 28 REPAPLYILVPRESYLALYIPLVKNKFKSFLSFEPLSEIWFEYNGTPLKWYIPVGVLFDLLAGSSATFLWNITVRFDSFP 107 (278)
T ss_pred CCCcchhhccchHHHHHHHHHHHHHHhhhccCCCchhHHhhhcCCcceeeeccHHHHHHHHhcCCcCcceEEEEecCCCC
Confidence 44667789999999999999988754433 22333 344442 243 678888854 567888888899
Q ss_pred CCCCC--CChHHHHHHHHHHHHHHHHH
Q 027761 107 VKEIP--ASETDAAAWLMDAFQLKDQL 131 (219)
Q Consensus 107 i~~iP--~~e~~~~~WL~~~w~eKD~l 131 (219)
-..|+ ++++.++..-.+.|+|=|-+
T Consensus 108 ~~~i~~~~s~D~~e~~F~~~lKEadyi 134 (278)
T KOG2976|consen 108 PTIILQMESKDQAEAFFFNCLKEADYI 134 (278)
T ss_pred CceecccCCHHHHHHHHHHHHHHHHHH
Confidence 88776 47788888889999986643
No 7
>PF06198 DUF999: Protein of unknown function (DUF999); InterPro: IPR009340 This is a family of conserved Schizosaccharomyces pombe proteins with unknown function.
Probab=50.04 E-value=1.3e+02 Score=23.95 Aligned_cols=30 Identities=13% Similarity=0.312 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 027761 114 ETDAAAWLMDAFQLKDQLLDKFNAQGHFPN 143 (219)
Q Consensus 114 e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~ 143 (219)
.+.+..+|+++|.|=.+.-.+||-+|+.+.
T Consensus 52 tnkik~flndlftefskfhns~yp~grist 81 (143)
T PF06198_consen 52 TNKIKEFLNDLFTEFSKFHNSYYPDGRIST 81 (143)
T ss_pred HHHHHHHHHhHHHHHHHhhhccCCCCcccc
Confidence 356889999999998888888888887654
No 8
>COG3224 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.22 E-value=2.2e+02 Score=24.49 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 027761 157 VNFIVVISLTAIFTYL 172 (219)
Q Consensus 157 ~~~~~w~~l~~~~~yl 172 (219)
.+.+.|.++.++..-+
T Consensus 122 ~~Llv~~~lYP~vl~~ 137 (195)
T COG3224 122 MNLLVLLVLYPVVLGF 137 (195)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5678888777765555
No 9
>KOG3386 consensus Copper transporter [Inorganic ion transport and metabolism]
Probab=26.78 E-value=3.6e+02 Score=22.19 Aligned_cols=28 Identities=25% Similarity=0.244 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHhhheeeeccce
Q 027761 177 SIWYKIYVGLACTSLASVTYFNIHPMLV 204 (219)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (219)
...+..|+.++++.-+..+++=+.+.+.
T Consensus 116 fMtfN~~l~Lavv~Ga~~G~flF~~~~~ 143 (155)
T KOG3386|consen 116 FMTFNGYLFLAVVLGAGVGYFLFGSLTF 143 (155)
T ss_pred HhhhhhHHHHHHHHHHhhhhheeeeccc
Confidence 3345667788888878888888888776
No 10
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=26.18 E-value=81 Score=28.84 Aligned_cols=44 Identities=27% Similarity=0.381 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEEEEEEEec
Q 027761 30 EKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVYDMTIAYK 80 (219)
Q Consensus 30 ~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTiaY~ 80 (219)
.|...+.+--++.|+|....+-.|-|+|..++.-.|+ |++|+=|
T Consensus 182 aktsaAl~~l~ea~lpyIsVLt~PTtGGVsASfA~lG-------Di~iAEP 225 (294)
T COG0777 182 AKTSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLG-------DIIIAEP 225 (294)
T ss_pred HHHHHHHHHHHhcCCceEEEecCCCccchhHhHHhcc-------CeeecCc
Confidence 3444555567788999999999999999999999988 8888844
No 11
>PF12062 HSNSD: heparan sulfate-N-deacetylase; InterPro: IPR021930 This family of proteins is are heparan sulphate N-deacetylase enzymes. This protein is found in eukaryotes. This enzyme is often found associated with PF00685 from PFAM. ; GO: 0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity, 0016787 hydrolase activity
Probab=25.98 E-value=63 Score=31.59 Aligned_cols=90 Identities=18% Similarity=0.302 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHcCCCC-CccccccCchhHHHHHHHhhcccCeEEEEEEE----ecCCCCCc--hhhccCC----CCceE
Q 027761 30 EKRNRSQKFAADVGLPV-LTNVLLPKTRGFCLCLETLRNTLDAVYDMTIA----YKNPCPSF--MDNVFGV----DPSEV 98 (219)
Q Consensus 30 ~k~~kS~~fA~k~gLP~-lkhvL~PRtkGf~~~l~~Lr~~~~aVyDvTia----Y~~~~Ps~--~~~l~G~----~p~~V 98 (219)
+-....++||.++|+|. ..+-.-|...|..-+-+.|-+.-..|++|++. ||.-.|.- .+++... ..++.
T Consensus 379 ~~m~lNk~Fa~~~~ip~~~~yaVaphhsgvypvh~~ly~awk~vw~i~vTstEeYphl~pa~~rrgfih~~i~VLPRQTC 458 (487)
T PF12062_consen 379 EQMILNKQFAKEHGIPTDMGYAVAPHHSGVYPVHEQLYEAWKKVWNIKVTSTEEYPHLRPARYRRGFIHRNIMVLPRQTC 458 (487)
T ss_pred HHHHHHHHhhhhccCCCCCcceEecccCceechhHHHHHHHHHHHccccccceeccccccchhhcCeeeCcEEEccCccc
Confidence 44566788999999995 67889999999999999998777778888776 44333331 1222110 23455
Q ss_pred EEEEEEEeCCCCCCChHHHHH
Q 027761 99 HIHVRRIPVKEIPASETDAAA 119 (219)
Q Consensus 99 hihvrr~pi~~iP~~e~~~~~ 119 (219)
.+.-..+-.++.|.+.+++.+
T Consensus 459 gLfThT~~~~~ypgG~~~L~~ 479 (487)
T PF12062_consen 459 GLFTHTIFYKEYPGGPKELDK 479 (487)
T ss_pred cceeeeeehhhCCCchHHHHh
Confidence 666667778888988776643
No 12
>PF10724 DUF2516: Protein of unknown function (DUF2516); InterPro: IPR019662 This entry represents a conserved protein in Actinobacteria. The function is not known.
Probab=24.49 E-value=1.7e+02 Score=22.50 Aligned_cols=12 Identities=25% Similarity=0.445 Sum_probs=8.7
Q ss_pred HHHhhheeeecc
Q 027761 191 LASVTYFNIHPM 202 (219)
Q Consensus 191 ~~~~~~~~~~~~ 202 (219)
.+.+...|+||.
T Consensus 77 aa~VYl~DVRPa 88 (100)
T PF10724_consen 77 AAGVYLVDVRPA 88 (100)
T ss_pred HhhheeecccHH
Confidence 355667899996
No 13
>COG2832 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.41 E-value=3.9e+02 Score=21.35 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 027761 113 SETDAAAWLMDAFQLKDQLLDKFNAQGHFPN 143 (219)
Q Consensus 113 ~e~~~~~WL~~~w~eKD~lL~~f~~~g~Fp~ 143 (219)
+.+.+.+||.++= -=.+++++++|+|--|.
T Consensus 42 sSpRf~~WLl~~~-~fg~~v~~~~e~~ai~~ 71 (119)
T COG2832 42 SSPRFHAWLLRHK-YFGPYVRDWREGGAIPR 71 (119)
T ss_pred CCcHHHHHHHcCc-hhhHHHHHHHHcCCCCh
Confidence 4567888887541 11357888888886544
No 14
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.34 E-value=88 Score=29.39 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhhcccCeEE
Q 027761 31 KRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLRNTLDAVY 73 (219)
Q Consensus 31 k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr~~~~aVy 73 (219)
+.+++++||+++|+|..+. .+|+..+++. +.+|+||
T Consensus 42 s~~~A~~fAq~~~~~~~k~-----y~syEeLakd--~~vDvVy 77 (351)
T KOG2741|consen 42 SLERAKEFAQRHNIPNPKA-----YGSYEELAKD--PEVDVVY 77 (351)
T ss_pred cHHHHHHHHHhcCCCCCcc-----ccCHHHHhcC--CCcCEEE
Confidence 7899999999999984443 2344333332 3466655
No 15
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=22.53 E-value=4.8e+02 Score=22.06 Aligned_cols=22 Identities=23% Similarity=0.474 Sum_probs=12.1
Q ss_pred chhhhHHHHHHHH--HHHHHHHHH
Q 027761 151 STLKCLVNFIVVI--SLTAIFTYL 172 (219)
Q Consensus 151 ~~~~~l~~~~~w~--~l~~~~~yl 172 (219)
|....+.+++..+ +++|++-|+
T Consensus 131 p~~~al~~~~sf~lg~liPllp~~ 154 (213)
T PF01988_consen 131 PWKAALATFLSFILGGLIPLLPYF 154 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444454444333 667777777
No 16
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.08 E-value=2.2e+02 Score=20.83 Aligned_cols=37 Identities=22% Similarity=0.411 Sum_probs=29.5
Q ss_pred eeCHHHHHHHHHHHHHcCCCCCccccccCchhHHHHHHHhh
Q 027761 26 WFSEEKRNRSQKFAADVGLPVLTNVLLPKTRGFCLCLETLR 66 (219)
Q Consensus 26 RfT~~k~~kS~~fA~k~gLP~lkhvL~PRtkGf~~~l~~Lr 66 (219)
--+-+.....++.|++.|.| +.+-|..|...+.+.|.
T Consensus 58 ~vsH~~~~~vk~~akk~~ip----~~~~~~~~~~~l~~~l~ 94 (97)
T PF10087_consen 58 YVSHNAMWKVKKAAKKYGIP----IIYSRSRGVSSLERALE 94 (97)
T ss_pred CcChHHHHHHHHHHHHcCCc----EEEECCCCHHHHHHHHH
Confidence 55666778888999999999 45558889888888775
No 17
>COG1636 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.83 E-value=84 Score=27.27 Aligned_cols=50 Identities=18% Similarity=0.309 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCCCCccccc-cCchhHHHHHHHhhcccCeEEEEEEEecC
Q 027761 31 KRNRSQKFAADVGLPVLTNVLL-PKTRGFCLCLETLRNTLDAVYDMTIAYKN 81 (219)
Q Consensus 31 k~~kS~~fA~k~gLP~lkhvL~-PRtkGf~~~l~~Lr~~~~aVyDvTiaY~~ 81 (219)
..+++.++|.++|-+.+.-.|. -+-|-. .-++..+..+...|||+.-+++
T Consensus 98 Rle~tA~~A~e~G~d~ftttL~iSp~Kn~-~qin~~G~~~~k~y~V~yl~~d 148 (204)
T COG1636 98 RLEKTAKKAKELGFDVFTTTLLISPKKNM-NQINEIGERAAKPYGVVYLPSN 148 (204)
T ss_pred HHHHHHHHHHHcCCchhhhheecCcccCH-HHHHHHhHHhhcccCceecCcc
Confidence 4678999999999999876654 444443 4455566677778999887764
No 18
>PF04800 ETC_C1_NDUFA4: ETC complex I subunit conserved region; InterPro: IPR006885 This entry represents prokaryotic NADH-ubiquinone oxidoreductase subunits (1.6.5.3 from EC, 1.6.99.3 from EC) from complex I of the electron transport chain initially identified in Neurospora crassa as a 21 kDa protein [].; GO: 0016651 oxidoreductase activity, acting on NADH or NADPH, 0022900 electron transport chain, 0005743 mitochondrial inner membrane; PDB: 2JYA_A 2LJU_A.
Probab=20.60 E-value=54 Score=25.32 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHcCCCCCccccccCchh
Q 027761 30 EKRNRSQKFAADVGLPVLTNVLLPKTRG 57 (219)
Q Consensus 30 ~k~~kS~~fA~k~gLP~lkhvL~PRtkG 57 (219)
..++.+.+||+++|++ | .|..|..+.
T Consensus 56 ~skE~Ai~yaer~G~~-Y-~V~~p~~r~ 81 (101)
T PF04800_consen 56 DSKEDAIAYAERNGWD-Y-EVEEPKKRK 81 (101)
T ss_dssp SSHHHHHHHHHHCT-E-E-EEE-STT--
T ss_pred CCHHHHHHHHHHcCCe-E-EEeCCCCCc
Confidence 3588899999999999 3 566666654
No 19
>COG4920 Predicted membrane protein [Function unknown]
Probab=20.15 E-value=3.4e+02 Score=24.02 Aligned_cols=35 Identities=3% Similarity=0.039 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeeccceecc
Q 027761 173 TLFSSIWYKIYVGLACTSLASVTYFNIHPMLVVGF 207 (219)
Q Consensus 173 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (219)
+++.-.|+.++++...+++.+....+.|+.|.++.
T Consensus 25 sffp~~f~tf~ilyilf~~glsiVm~~RSnp~l~~ 59 (249)
T COG4920 25 SFFPAEFFTFLILYILFFFGLSIVMGLRSNPYLKG 59 (249)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHhhccCccccc
Confidence 56677888888888888888999999999887743
Done!