Query 027763
Match_columns 219
No_of_seqs 251 out of 1562
Neff 9.1
Searched_HMMs 29240
Date Tue Mar 26 01:24:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027763.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027763hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.2E-39 1.8E-43 279.2 18.8 209 7-217 12-230 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 7.9E-33 2.7E-37 242.7 17.1 217 1-217 1-240 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.3E-30 1.1E-34 224.6 18.4 215 1-217 1-228 (456)
4 2acv_A Triterpene UDP-glucosyl 100.0 2.2E-30 7.4E-35 226.2 16.2 204 7-217 8-226 (463)
5 2vch_A Hydroquinone glucosyltr 100.0 9.2E-30 3.1E-34 223.1 18.6 211 1-217 1-221 (480)
6 2iya_A OLEI, oleandomycin glyc 99.8 4.5E-18 1.5E-22 146.1 11.7 126 8-140 12-141 (424)
7 4amg_A Snogd; transferase, pol 99.6 8.8E-16 3E-20 130.3 12.0 127 7-140 21-160 (400)
8 1iir_A Glycosyltransferase GTF 99.6 6.2E-16 2.1E-20 132.6 8.6 123 9-139 1-127 (415)
9 2iyf_A OLED, oleandomycin glyc 99.5 3.7E-14 1.3E-18 121.7 12.5 125 8-139 7-135 (430)
10 3ia7_A CALG4; glycosysltransfe 99.5 4.5E-14 1.5E-18 119.6 11.1 123 9-137 5-132 (402)
11 3rsc_A CALG2; TDP, enediyne, s 99.5 5.4E-14 1.9E-18 120.0 9.6 125 7-137 19-148 (415)
12 1rrv_A Glycosyltransferase GTF 99.5 2.1E-14 7.1E-19 123.0 7.0 122 9-139 1-128 (416)
13 2p6p_A Glycosyl transferase; X 99.4 3.6E-12 1.2E-16 107.7 10.6 124 9-138 1-137 (384)
14 3oti_A CALG3; calicheamicin, T 99.3 6.3E-12 2.2E-16 106.8 11.7 123 6-138 18-160 (398)
15 2yjn_A ERYCIII, glycosyltransf 99.3 2.4E-12 8.2E-17 111.0 9.1 127 7-139 19-175 (441)
16 4fzr_A SSFS6; structural genom 99.3 8.8E-12 3E-16 105.8 8.7 128 5-138 12-153 (398)
17 3h4t_A Glycosyltransferase GTF 99.3 4.1E-12 1.4E-16 108.6 6.2 121 9-140 1-127 (404)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.2 6.8E-11 2.3E-15 100.0 9.1 124 9-138 2-144 (391)
19 3otg_A CALG1; calicheamicin, T 99.1 1.5E-10 5.2E-15 98.3 9.0 125 5-138 17-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.7 1.7E-07 5.7E-12 78.9 10.8 114 10-136 4-122 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.8 0.00015 5E-09 60.0 10.7 113 9-137 7-127 (364)
22 3fro_A GLGA glycogen synthase; 96.9 0.021 7.2E-07 47.8 13.2 129 7-137 1-153 (439)
23 3c48_A Predicted glycosyltrans 96.5 0.0087 3E-07 50.5 8.3 123 7-138 19-154 (438)
24 2r60_A Glycosyl transferase, g 96.3 0.034 1.2E-06 47.9 11.1 128 1-138 1-152 (499)
25 2gek_A Phosphatidylinositol ma 94.6 0.12 4E-06 42.7 8.0 42 7-48 19-64 (406)
26 2jjm_A Glycosyl transferase, g 93.5 1.2 4.1E-05 36.6 12.1 113 8-138 15-134 (394)
27 3okp_A GDP-mannose-dependent a 93.1 0.23 8E-06 40.7 7.1 103 8-135 4-115 (394)
28 1v4v_A UDP-N-acetylglucosamine 91.9 0.65 2.2E-05 38.0 8.2 109 8-136 5-122 (376)
29 3s28_A Sucrose synthase 1; gly 91.0 0.51 1.7E-05 43.7 7.2 122 9-136 279-437 (816)
30 2iw1_A Lipopolysaccharide core 88.6 0.86 2.9E-05 36.9 6.2 51 10-66 2-55 (374)
31 3vue_A GBSS-I, granule-bound s 88.3 0.56 1.9E-05 41.1 5.1 45 1-45 1-52 (536)
32 2x0d_A WSAF; GT4 family, trans 87.4 0.48 1.6E-05 40.0 4.0 40 7-46 45-89 (413)
33 1psw_A ADP-heptose LPS heptosy 86.4 5.3 0.00018 32.1 9.7 102 10-135 2-107 (348)
34 1vgv_A UDP-N-acetylglucosamine 86.4 2 7E-05 34.9 7.2 112 10-137 2-118 (384)
35 2iuy_A Avigt4, glycosyltransfe 85.8 0.9 3.1E-05 36.6 4.7 28 19-46 30-57 (342)
36 2x6q_A Trehalose-synthase TRET 83.3 1.7 5.9E-05 35.9 5.5 40 7-46 39-80 (416)
37 2yxb_A Coenzyme B12-dependent 82.4 1.4 4.7E-05 32.1 4.0 39 7-45 17-55 (161)
38 3hbm_A UDP-sugar hydrolase; PS 82.4 2.6 8.9E-05 33.7 6.0 87 16-137 12-101 (282)
39 1rzu_A Glycogen synthase 1; gl 79.2 1.8 6.2E-05 36.6 4.2 37 10-46 2-44 (485)
40 2qzs_A Glycogen synthase; glyc 77.9 2.1 7.2E-05 36.2 4.3 37 10-46 2-44 (485)
41 3dzc_A UDP-N-acetylglucosamine 77.2 4.4 0.00015 33.7 6.0 110 8-136 25-142 (396)
42 2i2x_B MTAC, methyltransferase 77.0 4.4 0.00015 31.8 5.6 39 7-45 122-160 (258)
43 1y80_A Predicted cobalamin bin 76.9 3.6 0.00012 31.0 4.9 40 7-46 87-126 (210)
44 4hwg_A UDP-N-acetylglucosamine 75.7 7.9 0.00027 32.2 7.1 110 10-136 11-124 (385)
45 3tov_A Glycosyl transferase fa 75.3 17 0.00058 29.6 9.0 105 7-134 7-115 (349)
46 1mvl_A PPC decarboxylase athal 75.2 6.6 0.00023 29.9 5.9 42 8-51 19-60 (209)
47 3ot5_A UDP-N-acetylglucosamine 73.9 7.3 0.00025 32.5 6.5 112 9-136 28-145 (403)
48 1ccw_A Protein (glutamate muta 73.9 5.6 0.00019 27.9 5.0 38 8-45 3-40 (137)
49 3ezx_A MMCP 1, monomethylamine 71.6 6.2 0.00021 30.1 5.1 40 7-46 91-130 (215)
50 3vot_A L-amino acid ligase, BL 70.3 35 0.0012 28.3 10.0 26 107-132 74-101 (425)
51 2lpm_A Two-component response 67.8 5.1 0.00017 27.6 3.5 39 95-135 42-85 (123)
52 1id1_A Putative potassium chan 67.4 4.8 0.00016 28.4 3.4 32 9-45 4-35 (153)
53 2hy7_A Glucuronosyltransferase 66.5 6 0.00021 32.9 4.4 37 7-45 13-52 (406)
54 3zqu_A Probable aromatic acid 66.4 8.5 0.00029 29.3 4.8 39 9-48 5-43 (209)
55 3qjg_A Epidermin biosynthesis 65.4 15 0.00052 27.0 5.9 41 9-50 6-46 (175)
56 3to5_A CHEY homolog; alpha(5)b 61.5 9.1 0.00031 26.7 3.9 32 108-139 57-97 (134)
57 2q5c_A NTRC family transcripti 60.8 9.6 0.00033 28.5 4.1 45 93-142 129-173 (196)
58 2r8r_A Sensor protein; KDPD, P 60.7 16 0.00053 28.2 5.4 40 7-46 5-44 (228)
59 4g6h_A Rotenone-insensitive NA 59.6 5.7 0.00019 34.3 3.0 36 6-46 40-75 (502)
60 1lss_A TRK system potassium up 58.1 13 0.00044 25.1 4.2 33 8-45 4-36 (140)
61 2pju_A Propionate catabolism o 56.8 15 0.00052 28.1 4.7 41 92-137 140-180 (225)
62 3gl9_A Response regulator; bet 56.3 19 0.00063 23.7 4.7 43 95-139 35-86 (122)
63 1sbz_A Probable aromatic acid 56.1 14 0.00049 27.7 4.4 38 10-48 2-40 (197)
64 3lyu_A Putative hydrogenase; t 54.1 10 0.00036 26.5 3.2 36 9-47 19-54 (142)
65 3lqk_A Dipicolinate synthase s 52.9 30 0.001 26.0 5.7 40 8-48 7-47 (201)
66 4b4o_A Epimerase family protei 52.4 8.6 0.00029 30.2 2.8 32 10-45 2-33 (298)
67 3p9x_A Phosphoribosylglycinami 51.9 21 0.0007 27.2 4.7 45 94-138 15-61 (211)
68 1g63_A Epidermin modifying enz 51.8 28 0.00095 25.7 5.3 40 10-50 4-43 (181)
69 3ty2_A 5'-nucleotidase SURE; s 51.7 23 0.00078 27.9 5.0 48 1-50 4-51 (261)
70 3fwz_A Inner membrane protein 51.6 15 0.00051 25.4 3.7 35 7-46 6-40 (140)
71 3mcu_A Dipicolinate synthase, 50.6 21 0.00073 27.0 4.6 39 9-48 6-45 (207)
72 1g5t_A COB(I)alamin adenosyltr 49.6 24 0.00083 26.4 4.7 99 7-119 27-131 (196)
73 2g1u_A Hypothetical protein TM 48.4 24 0.00081 24.7 4.4 34 8-46 19-52 (155)
74 3t6k_A Response regulator rece 48.1 29 0.001 23.2 4.8 42 96-139 38-88 (136)
75 3eag_A UDP-N-acetylmuramate:L- 47.9 21 0.00072 28.7 4.5 34 8-45 4-37 (326)
76 4ds3_A Phosphoribosylglycinami 47.8 25 0.00087 26.6 4.6 44 94-137 20-65 (209)
77 3bul_A Methionine synthase; tr 47.5 25 0.00085 31.1 5.1 40 7-46 97-136 (579)
78 3kkj_A Amine oxidase, flavin-c 47.4 12 0.00041 27.7 2.8 18 26-43 15-32 (336)
79 1qzu_A Hypothetical protein MD 46.7 28 0.00097 26.2 4.7 43 8-51 19-62 (206)
80 1meo_A Phosophoribosylglycinam 46.6 29 0.00099 26.2 4.8 44 95-138 14-59 (209)
81 1p3y_1 MRSD protein; flavoprot 46.2 21 0.00072 26.7 3.9 39 9-48 9-47 (194)
82 2gk4_A Conserved hypothetical 45.6 16 0.00053 28.3 3.2 21 26-46 33-53 (232)
83 1pq4_A Periplasmic binding pro 45.1 44 0.0015 26.5 5.9 52 93-146 224-277 (291)
84 3m6m_D Sensory/regulatory prot 45.0 24 0.00083 23.9 3.9 32 107-138 57-99 (143)
85 3p0j_A Tyrosyl-tRNA synthetase 43.6 29 0.00098 31.4 5.0 42 6-47 380-426 (690)
86 3beo_A UDP-N-acetylglucosamine 43.4 21 0.00072 28.5 3.8 38 8-46 8-47 (375)
87 3f6p_A Transcriptional regulat 43.0 42 0.0014 21.7 4.8 42 96-139 36-83 (120)
88 3tqr_A Phosphoribosylglycinami 43.0 30 0.001 26.3 4.4 44 94-137 18-62 (215)
89 2ejb_A Probable aromatic acid 42.2 31 0.0011 25.6 4.3 38 10-48 3-40 (189)
90 4hb9_A Similarities with proba 42.0 20 0.00067 29.1 3.5 29 9-42 2-30 (412)
91 3lrx_A Putative hydrogenase; a 41.9 17 0.00059 25.8 2.8 37 9-48 24-60 (158)
92 3mc3_A DSRE/DSRF-like family p 41.4 44 0.0015 23.0 4.8 38 9-46 16-56 (134)
93 1kjn_A MTH0777; hypotethical p 40.7 49 0.0017 23.7 4.8 43 9-51 7-51 (157)
94 3av3_A Phosphoribosylglycinami 40.6 39 0.0013 25.5 4.7 44 95-138 17-62 (212)
95 3kcq_A Phosphoribosylglycinami 39.7 34 0.0012 26.0 4.2 44 94-137 21-66 (215)
96 2a33_A Hypothetical protein; s 39.5 45 0.0015 25.3 4.9 33 9-41 14-50 (215)
97 2ywr_A Phosphoribosylglycinami 39.2 46 0.0016 25.1 4.9 44 95-138 15-60 (216)
98 1p9o_A Phosphopantothenoylcyst 38.9 19 0.00064 29.2 2.8 23 25-47 68-90 (313)
99 3oy2_A Glycosyltransferase B73 38.3 30 0.001 28.1 4.0 37 10-47 2-41 (413)
100 1jkx_A GART;, phosphoribosylgl 37.6 44 0.0015 25.2 4.6 44 94-137 13-58 (212)
101 3auf_A Glycinamide ribonucleot 36.5 42 0.0014 25.7 4.3 30 109-138 52-81 (229)
102 3qxc_A Dethiobiotin synthetase 36.3 49 0.0017 25.5 4.7 35 9-43 21-57 (242)
103 3kjh_A CO dehydrogenase/acetyl 36.2 33 0.0011 25.6 3.8 37 10-46 2-38 (254)
104 3f67_A Putative dienelactone h 35.9 74 0.0025 23.0 5.7 34 11-44 34-67 (241)
105 3s40_A Diacylglycerol kinase; 35.8 50 0.0017 26.2 4.9 46 1-46 3-49 (304)
106 2vqe_B 30S ribosomal protein S 35.6 1.6E+02 0.0053 23.0 10.0 31 108-138 158-190 (256)
107 1dbw_A Transcriptional regulat 35.5 75 0.0026 20.5 5.2 42 96-139 37-85 (126)
108 4g65_A TRK system potassium up 35.5 12 0.0004 32.0 1.1 35 7-46 2-36 (461)
109 3gt7_A Sensor protein; structu 34.8 62 0.0021 22.0 4.8 43 95-139 40-91 (154)
110 3zzm_A Bifunctional purine bio 34.6 44 0.0015 29.0 4.5 96 9-117 10-111 (523)
111 2gt1_A Lipopolysaccharide hept 34.6 31 0.0011 27.3 3.5 43 10-52 2-46 (326)
112 4e5v_A Putative THUA-like prot 34.4 52 0.0018 26.0 4.7 38 7-45 3-43 (281)
113 2l2q_A PTS system, cellobiose- 34.2 67 0.0023 21.1 4.6 38 7-44 3-40 (109)
114 3h1g_A Chemotaxis protein CHEY 33.9 79 0.0027 20.5 5.1 32 108-139 51-91 (129)
115 4ao6_A Esterase; hydrolase, th 33.7 49 0.0017 25.1 4.4 38 9-46 56-95 (259)
116 1tvm_A PTS system, galactitol- 33.7 83 0.0028 20.9 5.1 38 7-44 20-58 (113)
117 3jte_A Response regulator rece 33.5 67 0.0023 21.3 4.7 44 96-139 37-87 (143)
118 1pno_A NAD(P) transhydrogenase 33.1 44 0.0015 24.4 3.6 36 9-46 24-64 (180)
119 1u7z_A Coenzyme A biosynthesis 32.8 33 0.0011 26.3 3.2 22 25-46 37-58 (226)
120 1d4o_A NADP(H) transhydrogenas 32.4 46 0.0016 24.4 3.6 36 9-46 23-63 (184)
121 2hmt_A YUAA protein; RCK, KTN, 32.1 32 0.0011 23.1 2.8 32 9-45 7-38 (144)
122 3c3m_A Response regulator rece 32.1 69 0.0024 21.1 4.6 31 108-138 47-86 (138)
123 1z82_A Glycerol-3-phosphate de 31.9 36 0.0012 27.3 3.5 33 8-45 14-46 (335)
124 3ew7_A LMO0794 protein; Q8Y8U8 31.7 32 0.0011 25.1 3.0 32 10-45 2-33 (221)
125 3llv_A Exopolyphosphatase-rela 31.6 33 0.0011 23.3 2.8 34 8-46 6-39 (141)
126 3gi1_A LBP, laminin-binding pr 31.5 64 0.0022 25.4 4.8 23 22-45 19-41 (286)
127 3e8x_A Putative NAD-dependent 31.4 32 0.0011 25.6 3.0 32 10-45 23-54 (236)
128 2fsv_C NAD(P) transhydrogenase 30.7 50 0.0017 24.7 3.6 36 9-46 47-87 (203)
129 3cf4_G Acetyl-COA decarboxylas 30.7 75 0.0026 22.7 4.7 29 107-136 35-69 (170)
130 3grc_A Sensor protein, kinase; 30.2 78 0.0027 20.8 4.6 41 96-138 40-89 (140)
131 2qs7_A Uncharacterized protein 30.2 51 0.0017 23.0 3.6 39 10-48 9-48 (144)
132 2rjn_A Response regulator rece 30.2 86 0.003 21.1 4.9 42 96-139 41-89 (154)
133 1djl_A Transhydrogenase DIII; 30.2 51 0.0017 24.7 3.6 36 9-46 46-86 (207)
134 3nhm_A Response regulator; pro 30.1 93 0.0032 20.1 5.0 31 107-137 46-85 (133)
135 4as2_A Phosphorylcholine phosp 30.0 39 0.0013 27.4 3.3 25 22-46 145-169 (327)
136 1dhr_A Dihydropteridine reduct 29.9 75 0.0026 23.7 4.9 32 10-44 8-39 (241)
137 3h2s_A Putative NADH-flavin re 29.7 36 0.0012 24.9 3.0 20 26-45 14-33 (224)
138 3of5_A Dethiobiotin synthetase 29.6 69 0.0024 24.2 4.6 27 17-43 14-40 (228)
139 2qr3_A Two-component system re 29.4 98 0.0034 20.2 5.0 33 107-139 46-90 (140)
140 1zi8_A Carboxymethylenebutenol 29.4 94 0.0032 22.3 5.3 35 11-45 30-64 (236)
141 3dkr_A Esterase D; alpha beta 29.4 70 0.0024 23.0 4.5 33 11-43 24-56 (251)
142 3rqi_A Response regulator prot 29.2 60 0.0021 23.0 4.0 43 95-139 40-89 (184)
143 1uxo_A YDEN protein; hydrolase 28.9 80 0.0027 22.0 4.7 38 8-45 4-42 (192)
144 2we8_A Xanthine dehydrogenase; 28.9 65 0.0022 26.8 4.5 35 7-46 203-237 (386)
145 1tmy_A CHEY protein, TMY; chem 28.8 81 0.0028 20.0 4.4 32 108-139 47-85 (120)
146 3eod_A Protein HNR; response r 28.7 90 0.0031 20.1 4.7 43 95-139 40-89 (130)
147 3op4_A 3-oxoacyl-[acyl-carrier 28.7 91 0.0031 23.5 5.2 33 9-44 9-41 (248)
148 3kht_A Response regulator; PSI 28.6 1.2E+02 0.0041 20.0 5.4 43 95-139 40-91 (144)
149 1jzt_A Hypothetical 27.5 kDa p 28.5 36 0.0012 26.3 2.8 35 9-45 59-94 (246)
150 3a10_A Response regulator; pho 28.4 1.1E+02 0.0038 19.1 5.0 31 108-138 45-82 (116)
151 3cg0_A Response regulator rece 28.1 75 0.0026 20.8 4.2 42 96-139 44-92 (140)
152 2o1e_A YCDH; alpha-beta protei 28.1 74 0.0025 25.4 4.7 44 93-138 226-271 (312)
153 4e7p_A Response regulator; DNA 27.8 1E+02 0.0036 20.6 5.0 44 94-139 54-104 (150)
154 3oz2_A Digeranylgeranylglycero 27.7 36 0.0012 27.2 2.8 18 26-43 17-34 (397)
155 1lld_A L-lactate dehydrogenase 27.5 36 0.0012 26.9 2.7 38 3-45 2-41 (319)
156 1hdo_A Biliverdin IX beta redu 27.5 43 0.0015 24.0 3.0 32 10-45 5-36 (206)
157 2qxy_A Response regulator; reg 27.4 89 0.0031 20.5 4.5 41 96-139 38-85 (142)
158 3hv2_A Response regulator/HD d 27.3 77 0.0026 21.4 4.2 42 96-139 48-96 (153)
159 3dm5_A SRP54, signal recogniti 27.3 91 0.0031 26.4 5.2 38 10-47 102-139 (443)
160 3h5i_A Response regulator/sens 27.3 1.3E+02 0.0044 19.8 5.3 41 96-137 39-86 (140)
161 3bfv_A CAPA1, CAPB2, membrane 27.3 90 0.0031 24.2 5.0 40 7-46 80-121 (271)
162 4dll_A 2-hydroxy-3-oxopropiona 27.2 76 0.0026 25.2 4.6 33 8-45 31-63 (320)
163 3ppi_A 3-hydroxyacyl-COA dehyd 27.2 86 0.003 24.0 4.9 33 9-44 30-62 (281)
164 3on5_A BH1974 protein; structu 27.1 68 0.0023 26.4 4.3 34 8-47 199-233 (362)
165 2bru_C NAD(P) transhydrogenase 26.9 49 0.0017 24.3 3.0 36 9-46 31-71 (186)
166 2vsy_A XCC0866; transferase, g 26.9 81 0.0028 26.9 5.0 39 7-45 204-246 (568)
167 2qzj_A Two-component response 26.8 88 0.003 20.6 4.4 32 108-139 48-85 (136)
168 1wcv_1 SOJ, segregation protei 26.7 65 0.0022 24.4 4.0 39 8-46 5-45 (257)
169 3d3k_A Enhancer of mRNA-decapp 26.7 42 0.0014 26.2 2.9 35 9-45 86-121 (259)
170 1xjc_A MOBB protein homolog; s 26.7 1.1E+02 0.0037 22.1 5.0 37 10-46 6-42 (169)
171 3cu5_A Two component transcrip 26.6 91 0.0031 20.7 4.4 30 107-136 48-84 (141)
172 2ew2_A 2-dehydropantoate 2-red 26.6 48 0.0016 25.8 3.3 32 9-45 4-35 (316)
173 4f0j_A Probable hydrolytic enz 26.5 91 0.0031 23.3 4.9 38 8-46 46-83 (315)
174 3pdi_B Nitrogenase MOFE cofact 26.3 84 0.0029 26.7 4.9 25 108-135 375-399 (458)
175 3pfb_A Cinnamoyl esterase; alp 26.3 1.2E+02 0.004 22.3 5.4 35 10-45 48-84 (270)
176 2a9o_A Response regulator; ess 26.2 90 0.0031 19.6 4.2 32 108-139 45-82 (120)
177 3b2n_A Uncharacterized protein 25.8 80 0.0027 20.7 4.0 32 108-139 49-87 (133)
178 3lte_A Response regulator; str 25.8 1.1E+02 0.0038 19.7 4.7 41 96-138 40-88 (132)
179 1i3c_A Response regulator RCP1 25.8 1.4E+02 0.0047 19.9 5.3 32 108-139 61-101 (149)
180 3k31_A Enoyl-(acyl-carrier-pro 25.8 1.3E+02 0.0043 23.5 5.6 35 10-45 31-65 (296)
181 2prs_A High-affinity zinc upta 25.8 1.1E+02 0.0038 23.9 5.3 44 94-139 211-256 (284)
182 2rdm_A Response regulator rece 25.8 1.2E+02 0.0042 19.4 4.9 42 96-138 39-88 (132)
183 1ep3_B Dihydroorotate dehydrog 25.5 76 0.0026 24.2 4.2 36 9-46 111-146 (262)
184 1mxh_A Pteridine reductase 2; 25.4 81 0.0028 24.1 4.4 32 10-44 12-43 (276)
185 2qjw_A Uncharacterized protein 25.4 91 0.0031 21.2 4.4 37 7-43 3-40 (176)
186 3ksu_A 3-oxoacyl-acyl carrier 25.4 1.1E+02 0.0037 23.3 5.1 32 9-43 11-42 (262)
187 3end_A Light-independent proto 25.4 88 0.003 24.4 4.7 39 8-46 40-79 (307)
188 1jx7_A Hypothetical protein YC 25.4 89 0.0031 20.3 4.1 29 20-48 16-46 (117)
189 2fuk_A XC6422 protein; A/B hyd 25.3 1.2E+02 0.0042 21.4 5.2 37 8-44 37-77 (220)
190 2hy5_A Putative sulfurtransfer 25.1 1.3E+02 0.0043 20.3 4.9 36 13-48 6-44 (130)
191 1p6q_A CHEY2; chemotaxis, sign 25.1 1E+02 0.0034 19.8 4.3 41 96-138 41-90 (129)
192 3sbx_A Putative uncharacterize 25.1 1.1E+02 0.0039 22.5 4.9 34 8-44 13-50 (189)
193 4fbl_A LIPS lipolytic enzyme; 24.9 62 0.0021 24.7 3.6 31 11-42 54-84 (281)
194 3hn2_A 2-dehydropantoate 2-red 24.9 70 0.0024 25.3 4.0 33 9-46 3-35 (312)
195 1xhf_A DYE resistance, aerobic 24.7 1.2E+02 0.004 19.3 4.6 32 108-139 47-84 (123)
196 3crn_A Response regulator rece 24.6 1.1E+02 0.0037 19.9 4.4 32 108-139 47-85 (132)
197 1ks9_A KPA reductase;, 2-dehyd 24.6 64 0.0022 24.8 3.6 31 10-45 2-32 (291)
198 3d3j_A Enhancer of mRNA-decapp 24.6 47 0.0016 26.6 2.9 35 9-45 133-168 (306)
199 3dqp_A Oxidoreductase YLBE; al 24.5 46 0.0016 24.4 2.7 21 26-46 14-34 (219)
200 3l9w_A Glutathione-regulated p 24.5 52 0.0018 27.5 3.2 35 7-46 3-37 (413)
201 3hzh_A Chemotaxis response reg 24.5 71 0.0024 21.8 3.6 44 95-138 70-120 (157)
202 3hwr_A 2-dehydropantoate 2-red 24.4 55 0.0019 26.0 3.3 33 7-44 18-50 (318)
203 3c85_A Putative glutathione-re 24.4 54 0.0019 23.4 3.0 34 8-46 39-73 (183)
204 3kcn_A Adenylate cyclase homol 24.3 1.2E+02 0.0041 20.3 4.7 43 96-139 37-86 (151)
205 2ts1_A Tyrosyl-tRNA synthetase 24.3 60 0.002 27.4 3.5 34 12-46 36-72 (419)
206 1vdc_A NTR, NADPH dependent th 24.0 28 0.00094 27.4 1.4 31 9-44 9-39 (333)
207 3cx3_A Lipoprotein; zinc-bindi 24.0 73 0.0025 25.0 3.8 23 22-45 17-39 (284)
208 1srr_A SPO0F, sporulation resp 23.8 82 0.0028 20.1 3.7 32 108-139 47-85 (124)
209 3k9g_A PF-32 protein; ssgcid, 23.7 89 0.003 23.7 4.3 39 7-46 25-65 (267)
210 2dkn_A 3-alpha-hydroxysteroid 23.7 53 0.0018 24.5 3.0 20 25-44 14-33 (255)
211 2o8n_A APOA-I binding protein; 23.7 52 0.0018 25.9 2.9 35 9-45 80-115 (265)
212 4gbj_A 6-phosphogluconate dehy 23.7 82 0.0028 24.9 4.1 30 10-44 7-36 (297)
213 3heb_A Response regulator rece 23.6 1.6E+02 0.0054 19.6 5.3 33 107-139 58-99 (152)
214 1xrs_B D-lysine 5,6-aminomutas 23.6 44 0.0015 26.3 2.4 41 7-47 119-168 (262)
215 1y42_X Tyrosyl-tRNA synthetase 23.5 49 0.0017 27.6 2.8 34 12-46 70-106 (392)
216 2ehd_A Oxidoreductase, oxidore 23.4 55 0.0019 24.3 3.0 21 25-45 18-38 (234)
217 3da8_A Probable 5'-phosphoribo 23.4 1E+02 0.0035 23.3 4.4 41 95-136 26-67 (215)
218 1yio_A Response regulatory pro 23.3 97 0.0033 22.2 4.3 32 107-138 47-85 (208)
219 3obb_A Probable 3-hydroxyisobu 23.2 67 0.0023 25.5 3.5 31 10-45 5-35 (300)
220 1mb3_A Cell division response 23.1 89 0.003 19.9 3.7 30 108-137 45-83 (124)
221 3qit_A CURM TE, polyketide syn 23.1 1.2E+02 0.0041 22.0 4.9 37 8-45 26-62 (286)
222 3cz5_A Two-component response 23.1 1.7E+02 0.0057 19.5 5.4 42 96-139 41-89 (153)
223 2pl1_A Transcriptional regulat 23.1 1.5E+02 0.005 18.6 4.9 32 108-139 44-82 (121)
224 1zgz_A Torcad operon transcrip 23.1 1.2E+02 0.004 19.2 4.3 32 108-139 46-83 (122)
225 1jbe_A Chemotaxis protein CHEY 23.0 1.4E+02 0.0048 19.0 4.8 41 96-138 39-88 (128)
226 3dfu_A Uncharacterized protein 22.9 66 0.0023 24.7 3.3 34 7-45 5-38 (232)
227 3qua_A Putative uncharacterize 22.8 1.4E+02 0.0048 22.2 5.0 33 8-41 22-58 (199)
228 3doj_A AT3G25530, dehydrogenas 22.8 87 0.003 24.7 4.1 33 8-45 21-53 (310)
229 2raf_A Putative dinucleotide-b 22.7 76 0.0026 23.4 3.6 33 8-45 19-51 (209)
230 3i42_A Response regulator rece 22.7 1E+02 0.0036 19.7 4.0 40 96-137 37-85 (127)
231 3noh_A Putative peptide bindin 22.6 54 0.0019 22.5 2.4 17 26-42 78-94 (139)
232 3fgn_A Dethiobiotin synthetase 22.6 1.6E+02 0.0056 22.6 5.6 36 8-43 25-62 (251)
233 4eg0_A D-alanine--D-alanine li 22.6 1.2E+02 0.0041 23.8 5.0 38 8-46 13-55 (317)
234 2r25_B Osmosensing histidine p 22.3 1.5E+02 0.0053 19.2 4.9 32 107-138 51-90 (133)
235 3dhn_A NAD-dependent epimerase 22.1 55 0.0019 24.0 2.7 34 9-46 5-38 (227)
236 1cyd_A Carbonyl reductase; sho 22.0 61 0.0021 24.1 3.0 21 25-45 20-40 (244)
237 1byi_A Dethiobiotin synthase; 22.0 1.1E+02 0.0037 22.3 4.4 33 11-43 4-37 (224)
238 1cp2_A CP2, nitrogenase iron p 22.0 1.1E+02 0.0036 23.2 4.4 35 11-45 4-38 (269)
239 3q9s_A DNA-binding response re 21.9 1.2E+02 0.004 22.8 4.6 42 96-139 71-118 (249)
240 3fkq_A NTRC-like two-domain pr 21.8 1E+02 0.0035 25.0 4.5 39 7-45 141-181 (373)
241 1f0y_A HCDH, L-3-hydroxyacyl-C 21.8 67 0.0023 25.2 3.3 32 9-45 16-47 (302)
242 2pnf_A 3-oxoacyl-[acyl-carrier 21.7 62 0.0021 24.1 3.0 33 10-45 8-40 (248)
243 1vl0_A DTDP-4-dehydrorhamnose 21.7 56 0.0019 25.1 2.7 26 17-44 19-44 (292)
244 2x5n_A SPRPN10, 26S proteasome 21.6 1.3E+02 0.0043 22.0 4.6 36 10-45 108-144 (192)
245 1ydh_A AT5G11950; structural g 21.6 1.5E+02 0.0051 22.4 5.0 35 9-45 10-48 (216)
246 2ywl_A Thioredoxin reductase r 21.6 61 0.0021 22.8 2.8 22 25-46 13-34 (180)
247 3ea0_A ATPase, para family; al 21.6 1.1E+02 0.0038 22.6 4.4 39 8-46 3-44 (245)
248 3uf0_A Short-chain dehydrogena 21.6 1.5E+02 0.0051 22.7 5.2 33 9-44 31-63 (273)
249 3i83_A 2-dehydropantoate 2-red 21.5 69 0.0024 25.4 3.3 33 9-46 3-35 (320)
250 3n0r_A Response regulator; sig 21.5 1.2E+02 0.004 23.6 4.6 32 107-138 204-242 (286)
251 3ius_A Uncharacterized conserv 21.5 51 0.0018 25.2 2.5 33 9-46 6-38 (286)
252 3lou_A Formyltetrahydrofolate 21.4 99 0.0034 24.6 4.1 42 93-136 107-150 (292)
253 1jil_A Tyrrs, tyrosyl-tRNA syn 21.4 58 0.002 27.4 2.9 35 11-46 37-74 (420)
254 2jk1_A HUPR, hydrogenase trans 21.3 1.2E+02 0.0042 19.8 4.2 31 108-138 44-81 (139)
255 3i7m_A XAA-Pro dipeptidase; st 21.3 55 0.0019 22.3 2.4 32 20-51 1-32 (140)
256 1imj_A CIB, CCG1-interacting f 21.2 1.9E+02 0.0066 20.1 5.6 38 8-46 32-71 (210)
257 3awd_A GOX2181, putative polyo 21.2 64 0.0022 24.3 3.0 33 10-45 14-46 (260)
258 3n0v_A Formyltetrahydrofolate 21.2 1.1E+02 0.0038 24.2 4.4 42 93-136 102-145 (286)
259 3p32_A Probable GTPase RV1496/ 21.2 1.3E+02 0.0044 24.3 4.9 40 7-46 78-117 (355)
260 2l69_A Rossmann 2X3 fold prote 21.1 88 0.003 20.4 3.1 28 20-47 85-112 (134)
261 3cfy_A Putative LUXO repressor 21.1 1.1E+02 0.0037 20.2 3.9 32 108-139 48-86 (137)
262 3g0o_A 3-hydroxyisobutyrate de 21.0 61 0.0021 25.5 2.8 34 7-45 6-39 (303)
263 1nff_A Putative oxidoreductase 20.9 65 0.0022 24.5 3.0 32 10-44 8-39 (260)
264 3gpi_A NAD-dependent epimerase 20.9 61 0.0021 24.8 2.8 31 10-45 5-35 (286)
265 2d1p_A TUSD, hypothetical UPF0 20.8 1.6E+02 0.0056 20.3 4.8 36 11-46 16-54 (140)
266 3o26_A Salutaridine reductase; 20.8 1.2E+02 0.0041 23.3 4.6 34 9-45 12-45 (311)
267 2zat_A Dehydrogenase/reductase 20.8 66 0.0023 24.4 3.0 32 10-44 15-46 (260)
268 3f9i_A 3-oxoacyl-[acyl-carrier 20.7 67 0.0023 24.1 3.0 34 9-45 14-47 (249)
269 1bg6_A N-(1-D-carboxylethyl)-L 20.7 76 0.0026 25.3 3.5 32 9-45 5-36 (359)
270 4gxt_A A conserved functionall 20.7 72 0.0025 26.4 3.3 25 22-46 223-247 (385)
271 3afn_B Carbonyl reductase; alp 20.7 67 0.0023 24.0 3.0 32 11-45 9-40 (258)
272 3hh1_A Tetrapyrrole methylase 20.6 99 0.0034 20.5 3.5 16 28-43 71-86 (117)
273 3r6d_A NAD-dependent epimerase 20.5 70 0.0024 23.4 3.0 21 25-45 18-39 (221)
274 1ihu_A Arsenical pump-driving 20.5 1.7E+02 0.0057 25.5 5.8 38 9-46 8-46 (589)
275 2xhz_A KDSD, YRBH, arabinose 5 20.5 1.4E+02 0.0048 21.1 4.6 31 18-48 105-135 (183)
276 2cfc_A 2-(R)-hydroxypropyl-COM 20.4 68 0.0023 23.9 3.0 20 25-44 15-34 (250)
277 3ing_A Homoserine dehydrogenas 20.4 1.4E+02 0.0048 24.0 4.9 39 7-45 81-119 (325)
278 2ph3_A 3-oxoacyl-[acyl carrier 20.4 63 0.0022 24.0 2.7 18 25-42 14-31 (245)
279 2wtm_A EST1E; hydrolase; 1.60A 20.4 1.8E+02 0.0061 21.3 5.4 34 10-44 29-64 (251)
280 1qkk_A DCTD, C4-dicarboxylate 20.4 1.2E+02 0.004 20.4 4.0 42 96-139 37-85 (155)
281 3orf_A Dihydropteridine reduct 20.4 68 0.0023 24.2 3.0 33 10-45 23-55 (251)
282 2wsb_A Galactitol dehydrogenas 20.3 69 0.0023 24.0 3.0 32 10-44 12-43 (254)
283 2g36_A Tryptophanyl-tRNA synth 20.2 55 0.0019 26.7 2.4 26 20-45 28-53 (340)
284 1zk4_A R-specific alcohol dehy 20.2 69 0.0024 23.9 3.0 33 10-45 7-39 (251)
285 1ooe_A Dihydropteridine reduct 20.2 57 0.002 24.3 2.4 32 10-44 4-35 (236)
286 1ycd_A Hypothetical 27.3 kDa p 20.2 1.4E+02 0.0048 21.7 4.7 39 7-45 4-45 (243)
287 3c97_A Signal transduction his 20.2 1.8E+02 0.006 19.0 4.9 20 108-127 54-75 (140)
288 1uls_A Putative 3-oxoacyl-acyl 20.1 70 0.0024 24.1 3.0 32 10-44 6-37 (245)
289 3l77_A Short-chain alcohol deh 20.1 70 0.0024 23.7 3.0 32 10-44 3-34 (235)
290 2o23_A HADH2 protein; HSD17B10 20.1 69 0.0024 24.1 3.0 33 10-45 13-45 (265)
291 3pe6_A Monoglyceride lipase; a 20.1 1.3E+02 0.0045 22.1 4.6 36 9-45 43-78 (303)
292 2fx5_A Lipase; alpha-beta hydr 20.1 1E+02 0.0035 22.9 3.9 36 10-45 50-85 (258)
293 3cio_A ETK, tyrosine-protein k 20.1 1.1E+02 0.0039 24.0 4.3 39 8-46 103-143 (299)
294 3dqz_A Alpha-hydroxynitrIle ly 20.1 98 0.0034 22.4 3.8 37 9-46 5-41 (258)
295 2jae_A L-amino acid oxidase; o 20.0 1E+02 0.0036 25.7 4.3 33 7-44 10-42 (489)
296 1boo_A Protein (N-4 cytosine-s 20.0 63 0.0021 25.9 2.7 32 109-140 252-285 (323)
297 3fgn_A Dethiobiotin synthetase 20.0 1.4E+02 0.0047 23.0 4.6 33 107-139 125-167 (251)
298 3c1o_A Eugenol synthase; pheny 20.0 64 0.0022 25.2 2.8 33 9-45 5-37 (321)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.2e-39 Score=279.21 Aligned_cols=209 Identities=17% Similarity=0.239 Sum_probs=161.8
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCC--CcEEEEeCcccccccCCCC--CCCCeEEEEccCCCCCCCCCCcccHHH
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKG--LKITLAITNFIYKTKKPPQ--PSDSVQIDTISDGYDDGGFSEAESIDA 82 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG--~~VT~~t~~~~~~~~~~~~--~~~~i~~~~l~~~~~~~~~~~~~~~~~ 82 (219)
+++||+++|+|+|||++||++|||+|++|| ++|||++|+.+..++.+.. ..++|+|+.+|+++|+ +.+...+...
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~~~~~ 90 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSGNPRE 90 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCSCTTH
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccCChHH
Confidence 478999999999999999999999999999 9999999987776654321 1357999999999887 4443333223
Q ss_pred HHHHHHHHhhHHHHHHHHHhhc-CCCCccEEEeCCCcccHHHHHHHcCCCeeEEechhhHHHHHHHHHhc--Cccc--CC
Q 027763 83 YLQNMEVAGLKTLAELITKYKS-SSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAVNFIYYLVHH--GLLK--LP 157 (219)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~--~~~~--~~ 157 (219)
.+..+.+.+...+++.++++.+ ...++||||+|+|++|+.++|+++|||++.|||++++.+++++|++. +... ..
T Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~ 170 (454)
T 3hbf_A 91 PIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV 170 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence 3334444445567777766532 23578999999999999999999999999999999999999988642 1111 01
Q ss_pred CCCCcee-cCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHhccCCCCeEEEcChhhhccC
Q 027763 158 VSSTPVS-IPGMPLLELQDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ 217 (219)
Q Consensus 158 ~~~~~~~-~Pg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~ 217 (219)
.+++.+. +||+|+++.+|+|+.+.. +..+.+++++.+..++..++++||+|||+|||++
T Consensus 171 ~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~ 230 (454)
T 3hbf_A 171 HDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPL 230 (454)
T ss_dssp TTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred ccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHH
Confidence 1235565 899999999999988864 3334577888888999999999999999999974
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=7.9e-33 Score=242.74 Aligned_cols=217 Identities=26% Similarity=0.451 Sum_probs=153.9
Q ss_pred CcccCCCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCC------CCCeEEEEccCCCCCCC-
Q 027763 1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQP------SDSVQIDTISDGYDDGG- 73 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~------~~~i~~~~l~~~~~~~~- 73 (219)
|+..-.+++||+++|+|++||++||++||++|++|||+|||++++.+..++.+... .++++|+.+|+++|+.+
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~ 80 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEG 80 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC----
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccc
Confidence 55544456899999999999999999999999999999999999987655533200 13799999998776511
Q ss_pred -CCCcccHHHHHHHHHHHhhHHHHHHHHHhhcC--CCCccEEEeCCCcccHHHHHHHcCCCeeEEechhhHHHHHHHHHh
Q 027763 74 -FSEAESIDAYLQNMEVAGLKTLAELITKYKSS--SNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAVNFIYYLVH 150 (219)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~ 150 (219)
.....++..++..+...+...++++++++..+ ..++||||+|.+++|+..+|+++|||++.|++++++.++.++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 160 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFR 160 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHH
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHH
Confidence 11123444444444445677888999887532 247999999999999999999999999999999998887765542
Q ss_pred ----cCcccCCC-----C---CCce-ecCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHhccCCCCeEEEcChhhhccC
Q 027763 151 ----HGLLKLPV-----S---STPV-SIPGMPLLELQDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ 217 (219)
Q Consensus 151 ----~~~~~~~~-----~---~~~~-~~Pg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~ 217 (219)
.+..+... . +..+ .+||+++++.+++|..+...+..+...+.+.+..+..++++++|+|||++||++
T Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~ 240 (482)
T 2pq6_A 161 SFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240 (482)
T ss_dssp HHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred HHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHH
Confidence 34444221 0 1223 369999999999997765433233455666666778889999999999999964
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.97 E-value=3.3e-30 Score=224.64 Aligned_cols=215 Identities=20% Similarity=0.286 Sum_probs=144.6
Q ss_pred CcccCCCCceEEEEeCCCccChhHHHHHHHHHHhCCC--cEEEEeCcccccccCCCC---CCCCeEEEEccCCCCCCCCC
Q 027763 1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGL--KITLAITNFIYKTKKPPQ---PSDSVQIDTISDGYDDGGFS 75 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~--~VT~~t~~~~~~~~~~~~---~~~~i~~~~l~~~~~~~~~~ 75 (219)
|..+ .++.||+++|+|++||++||++||++|++||| .||+++++.+..++.+.. ..++|+++.+++++|+ +.+
T Consensus 1 m~~~-~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~ 78 (456)
T 2c1x_A 1 MSQT-TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYV 78 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCC
T ss_pred CCCC-CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-ccc
Confidence 5553 24679999999999999999999999999864 568899876544332210 0247999999988876 322
Q ss_pred CcccHHHHHHHHHHHhhHHHHHHHHHhhcC-CCCccEEEeCCCcccHHHHHHHcCCCeeEEechhhHHHHHHHHHh----
Q 027763 76 EAESIDAYLQNMEVAGLKTLAELITKYKSS-SNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAVNFIYYLVH---- 150 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~---- 150 (219)
...+....+..+.+.+...++++++++.++ ..++||||+|.++.|+.++|+++|||++.|++++++.++.+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE 158 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHh
Confidence 111222222333333344566666654321 257999999999999999999999999999999998887765442
Q ss_pred c-CcccC-CCCCCce-ecCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHhccCCCCeEEEcChhhhccC
Q 027763 151 H-GLLKL-PVSSTPV-SIPGMPLLELQDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ 217 (219)
Q Consensus 151 ~-~~~~~-~~~~~~~-~~Pg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~ 217 (219)
. +..+. ...++.+ .+||+++++.+|+|..+..........+.+.+..+..++++++++|||++||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 159 KIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp HHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred ccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 1 21111 1112344 479999999999997654322223344555566667788999999999999974
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.97 E-value=2.2e-30 Score=226.22 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=148.8
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhC--CCcEEEEeCcccccc-----cCC-CCCCCCeEEEEccCC-CCCCCCCCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASK--GLKITLAITNFIYKT-----KKP-PQPSDSVQIDTISDG-YDDGGFSEA 77 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~r--G~~VT~~t~~~~~~~-----~~~-~~~~~~i~~~~l~~~-~~~~~~~~~ 77 (219)
+++||+++|+|++||++||++||++|++| ||+|||++++.+..+ +.+ ....++++|+.+|++ ++. .+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~--~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP--QELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC--GGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc--cccc
Confidence 46799999999999999999999999999 999999999876421 110 001257999999975 332 1111
Q ss_pred ccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEechhhHHHHHHHHHhcCcc--c
Q 027763 78 ESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAVNFIYYLVHHGLL--K 155 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~~~~--~ 155 (219)
.+....+......+...++++++++ +..++||||+|.++.|+.++|+++|||+++|++++++.++++++++.... +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTI--LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHH--CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhc--cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC
Confidence 1221112222234556788888876 22579999999999999999999999999999999999988888753211 1
Q ss_pred CCCCCC---ceecCCC-CCCCCCCCCCCCCCCCCChHHHHHHHHHHhccCCCCeEEEcChhhhccC
Q 027763 156 LPVSST---PVSIPGM-PLLELQDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ 217 (219)
Q Consensus 156 ~~~~~~---~~~~Pg~-p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~ 217 (219)
+.+.++ .+.+||+ ++++.+|+|..+.++ ...++.+.+..+..++++|+++|||+|||++
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~ 226 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQS 226 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHH
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHH
Confidence 111122 4568999 899999998655543 1255666777788889999999999999975
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.97 E-value=9.2e-30 Score=223.14 Aligned_cols=211 Identities=23% Similarity=0.318 Sum_probs=147.5
Q ss_pred CcccCCCCceEEEEeCCCccChhHHHHHHHHHHhC-CCcEEEEeCccc--ccccCCC-CC-CCCeEEEEccCCCCCCCCC
Q 027763 1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASK-GLKITLAITNFI--YKTKKPP-QP-SDSVQIDTISDGYDDGGFS 75 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~~--~~~~~~~-~~-~~~i~~~~l~~~~~~~~~~ 75 (219)
|+.. ++.||+++|+|++||++||++||++|++| ||+|||+++..+ .+.+.+. .. ..+++|+.+|++..+ +..
T Consensus 1 M~~~--~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~ 77 (480)
T 2vch_A 1 MEES--KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLS 77 (480)
T ss_dssp -------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSC
T ss_pred CCCC--CCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCC
Confidence 6443 45799999999999999999999999998 999999999874 2222210 00 247999999864211 111
Q ss_pred CcccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCc-cEEEeCCCcccHHHHHHHcCCCeeEEechhhHHHHHHHHHhc---
Q 027763 76 EAESIDAYLQNMEVAGLKTLAELITKYKSSSNPI-DCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAVNFIYYLVHH--- 151 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~~~~~~~~~~--- 151 (219)
...+....+......+.+.++++++++.. ..++ ||||+|.++.|+..+|+++|||++.|++++++.+++++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 156 (480)
T 2vch_A 78 SSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE 156 (480)
T ss_dssp TTCCHHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence 11123222222233345678888877632 2467 999999999999999999999999999999998888877642
Q ss_pred -CcccCCCCCCceecCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHhccCCCCeEEEcChhhhccC
Q 027763 152 -GLLKLPVSSTPVSIPGMPLLELQDMPSFIGVQGQYPAYFEMVLNQFSNADRADLVLVNTFYKLESQ 217 (219)
Q Consensus 152 -~~~~~~~~~~~~~~Pg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~eLE~~ 217 (219)
+..++.+.+..+.+||+|+++.+++|..+.+.. ...++.+.+..+..++++|+++|||+|||+.
T Consensus 157 ~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~ 221 (480)
T 2vch_A 157 TVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPN 221 (480)
T ss_dssp HCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHHHHHHGGGCSEEEESCCTTTSHH
T ss_pred cCCCcccccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHHHHHHhcccCCEEEEcCHHHHhHH
Confidence 111111112345689999999999997665432 2355666677778889999999999999974
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.75 E-value=4.5e-18 Score=146.09 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=91.4
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCCC----cccHHHH
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSE----AESIDAY 83 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~~~ 83 (219)
++||++++++++||++|+++||++|+++||+||+++++.+.+.+.+ .+++++.++++++. +... ..+....
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 86 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA----AGATPVVYDSILPK-ESNPEESWPEDQESA 86 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----HTCEEEECCCCSCC-TTCTTCCCCSSHHHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh----CCCEEEecCccccc-cccchhhcchhHHHH
Confidence 4699999999999999999999999999999999999887655443 36889888865543 2111 2233333
Q ss_pred HHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEechhh
Q 027763 84 LQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTC 140 (219)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a 140 (219)
+..+.......++++.+.+. + .++||||+|.+..|+..+|+++|||++.+++..+
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~-~-~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 87 MGLFLDEAVRVLPQLEDAYA-D-DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-T-SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHh-c-cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 33333322223334333332 2 4689999999999999999999999999998764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.65 E-value=8.8e-16 Score=130.35 Aligned_cols=127 Identities=15% Similarity=0.092 Sum_probs=83.1
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCC------CCCCC---c
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDD------GGFSE---A 77 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~------~~~~~---~ 77 (219)
+.+||+++|+|++||++|+++||++|++|||+|||++++....... .++.++.+.++... ..... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-----AGLCAVDVSPGVNYAKLFVPDDTDVTDPM 95 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-----TTCEEEESSTTCCSHHHHSCCC-------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-----cCCeeEecCCchhHhhhcccccccccccc
Confidence 5689999999999999999999999999999999999987654333 24666665432110 00000 0
Q ss_pred c----cHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEechhh
Q 027763 78 E----SIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTC 140 (219)
Q Consensus 78 ~----~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a 140 (219)
. ........+.......+.++++.+.+ .+||+||+|.+..|+..+|+++|||++.+.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 96 HSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 0 01111112222222233333333322 2579999999999999999999999999876543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.62 E-value=6.2e-16 Score=132.58 Aligned_cols=123 Identities=13% Similarity=0.114 Sum_probs=83.2
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCCC-cccHHHHHHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSE-AESIDAYLQNM 87 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~~~~~ 87 (219)
+||++++++++||++|+++||++|++|||+|||++++...+.+.. .+++++.++....+ .... .......+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~----~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 75 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE----VGVPHVPVGPSARA-PIQRAKPLTAEDVRRF 75 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTCCEEECCC--------CCSCCCHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH----cCCeeeeCCCCHHH-HhhcccccchHHHHHH
Confidence 489999999999999999999999999999999999876544432 36888888754321 1111 11111111111
Q ss_pred HHHhhHHHHHHHHHhhcCCCCccEEEeCC-Cccc--HHHHHHHcCCCeeEEechh
Q 027763 88 EVAGLKTLAELITKYKSSSNPIDCVVYDA-FLYW--ALDVAKGFGLFSAAFFTQT 139 (219)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~d~vI~D~-~~~~--~~~vA~~lgiP~v~~~~~~ 139 (219)
+...+.+.++++.+...++||||+|. +..| +..+|+++|||++.+++.+
T Consensus 76 ---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 76 ---TTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp ---HHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred ---HHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 11123334444331124689999998 7788 8999999999999998876
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.55 E-value=3.7e-14 Score=121.66 Aligned_cols=125 Identities=17% Similarity=0.269 Sum_probs=87.2
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCCC----cccHHHH
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSE----AESIDAY 83 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~~~ 83 (219)
++||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++...+. +... ..+....
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA----TGPRPVLYHSTLPG-PDADPEAWGSTLLDN 81 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT----TSCEEEECCCCSCC-TTSCGGGGCSSHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh----CCCEEEEcCCcCcc-ccccccccchhhHHH
Confidence 4699999999999999999999999999999999999876544443 36888888754432 2111 1232222
Q ss_pred HHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEechh
Q 027763 84 LQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQT 139 (219)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~ 139 (219)
+..+...+...+..+.+.+. + .++|+||+|.+..|+..+|+++|||++.+++..
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~-~-~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 82 VEPFLNDAIQALPQLADAYA-D-DIPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-T-SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHhh-c-cCCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 22222222223334444332 2 468999999988889999999999999998654
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.53 E-value=4.5e-14 Score=119.63 Aligned_cols=123 Identities=20% Similarity=0.234 Sum_probs=85.6
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCC-C--CCcccHHHHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGG-F--SEAESIDAYLQ 85 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~--~~~~~~~~~~~ 85 (219)
.||+++++++.||++|++.|+++|+++||+|++++++...+.+.. .+++++.++..++... . ....+....+.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA----AGAEVVLYKSEFDTFHVPEVVKQEDAETQLH 80 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----TTCEEEECCCGGGTSSSSSSSCCTTHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH----cCCEEEecccccccccccccccccchHHHHH
Confidence 499999999999999999999999999999999999876655543 3688888874332210 0 01112222222
Q ss_pred H-HHHHhhHHHHHHHHHhhcCCCCccEEEeC-CCcccHHHHHHHcCCCeeEEec
Q 027763 86 N-MEVAGLKTLAELITKYKSSSNPIDCVVYD-AFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 86 ~-~~~~~~~~l~~~l~~l~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
. +.......+.++.+.+. + .++|+||+| .+..|+..+|+++|||++.+.+
T Consensus 81 ~~~~~~~~~~~~~l~~~l~-~-~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~ 132 (402)
T 3ia7_A 81 LVYVRENVAILRAAEEALG-D-NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTG 132 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHT-T-CCCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHh-c-cCCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence 2 22222233444444443 2 468999999 8888999999999999999864
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.50 E-value=5.4e-14 Score=120.01 Aligned_cols=125 Identities=16% Similarity=0.176 Sum_probs=86.1
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCC---CcccHHHH
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFS---EAESIDAY 83 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~~~~~~~~ 83 (219)
+++||+++++++.||++|++.||++|+++||+|++++++...+.+.. .+++++.++..++..... ...+....
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA----AGATVVPYQSEIIDADAAEVFGSDDLGVR 94 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTCEEEECCCSTTTCCHHHHHHSSSSCHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----cCCEEEeccccccccccchhhccccHHHH
Confidence 46799999999999999999999999999999999998876665543 368888887544321000 00000011
Q ss_pred HHH-HHHHhhHHHHHHHHHhhcCCCCccEEEeC-CCcccHHHHHHHcCCCeeEEec
Q 027763 84 LQN-MEVAGLKTLAELITKYKSSSNPIDCVVYD-AFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 84 ~~~-~~~~~~~~l~~~l~~l~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
+.. +.......+.++.+.+. + .+||+||+| .+..|+..+|+++|||++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~l~~~l~-~-~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~ 148 (415)
T 3rsc_A 95 PHLMYLRENVSVLRATAEALD-G-DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSA 148 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-S-SCCSEEEEESTTHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHh-c-cCCCEEEECchhhhHHHHHHHHhCCCEEEEEe
Confidence 111 22222223344444443 2 468999999 7888899999999999999874
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.50 E-value=2.1e-14 Score=123.02 Aligned_cols=122 Identities=13% Similarity=0.037 Sum_probs=81.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCCC--cccHH-HHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSE--AESID-AYLQ 85 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~--~~~~~-~~~~ 85 (219)
+||++++.++.||++|++.||++|+++||+|||++++...+.+.. .+++++.++..... .... ..... .+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~----~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE----VGVPHVPVGLPQHM-MLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----HTCCEEECSCCGGG-CCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH----cCCeeeecCCCHHH-HHhhccccchhHHHHH
Confidence 489999999999999999999999999999999999875544432 36888888753211 1100 01111 1111
Q ss_pred HHHHHhhHHHHHHHHHhhcCCCCccEEEeCC-Cccc--HHHHHHHcCCCeeEEechh
Q 027763 86 NMEVAGLKTLAELITKYKSSSNPIDCVVYDA-FLYW--ALDVAKGFGLFSAAFFTQT 139 (219)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~-~~~~--~~~vA~~lgiP~v~~~~~~ 139 (219)
.+. ..+.++++.+.....++||||+|. +..| +..+|+++|||++.+++.+
T Consensus 76 ~~~----~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 76 LAA----MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHH----HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHH----HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 111 122333333321114689999997 4566 8899999999999987765
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.35 E-value=3.6e-12 Score=107.66 Aligned_cols=124 Identities=13% Similarity=0.048 Sum_probs=80.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCC-C----------CCCCCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYD-D----------GGFSEA 77 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~-~----------~~~~~~ 77 (219)
+||++++.++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++.... . ...+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG----VGLPAVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTCCEEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----CCCEEEEeCCcchHHHHhhhcccCccccCcc
Confidence 479999999999999999999999999999999998865443332 3577777764220 0 000000
Q ss_pred ccHHHHH-HH-HHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 78 ESIDAYL-QN-MEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 78 ~~~~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
......+ .. +...+...+.++.+.+.+ .+||+||+|.+..|+..+|+++|||++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~ 137 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWD 137 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccC
Confidence 0111111 11 111112223344433322 25899999998888899999999999988754
No 14
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.34 E-value=6.3e-12 Score=106.79 Aligned_cols=123 Identities=18% Similarity=0.204 Sum_probs=82.3
Q ss_pred CCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCC--------------
Q 027763 6 IHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDD-------------- 71 (219)
Q Consensus 6 ~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------------- 71 (219)
.+.+||+++..++.||++|++.|+++|.++||+|+++++ ...+.+.. .+++++.++....-
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA----AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT----TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh----CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 356799999999999999999999999999999999998 54444443 36888887642100
Q ss_pred ------CCCCCcccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 72 ------GGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 72 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
............+......+...+.+++++. +||+||+|....++..+|+++|||++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0000111111111112112223344444432 5799999988888889999999999987654
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.34 E-value=2.4e-12 Score=111.05 Aligned_cols=127 Identities=10% Similarity=0.091 Sum_probs=84.9
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCC-------------
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGG------------- 73 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~------------- 73 (219)
..+||++++.++.||++|++.|+++|.++||+|++++++...+.+.. .+++++.++......+
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~----~G~~~~~i~~~~~~~~~~~~~~~~~~~~~ 94 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA----AGLTAVPVGTDVDLVDFMTHAGHDIIDYV 94 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT----TTCCEEECSCCCCHHHHHHHTTHHHHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh----CCCceeecCCccchHHHhhhhhccccccc
Confidence 35799999999999999999999999999999999999876544443 3688888874321000
Q ss_pred --CC-----Cc-ccHH---HHHHHHHHHhh-----H-HHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEe
Q 027763 74 --FS-----EA-ESID---AYLQNMEVAGL-----K-TLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFF 136 (219)
Q Consensus 74 --~~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 136 (219)
.+ .. .... .....+..... . .+.++++.+.+ .++|+||+|.+..|+..+|+++|||++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 95 RSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp TTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCEEEEC
T ss_pred ccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCEEEEe
Confidence 00 00 0111 11111211100 2 44445443332 258999999988889999999999999986
Q ss_pred chh
Q 027763 137 TQT 139 (219)
Q Consensus 137 ~~~ 139 (219)
...
T Consensus 173 ~~~ 175 (441)
T 2yjn_A 173 WGP 175 (441)
T ss_dssp SSC
T ss_pred cCC
Confidence 543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.28 E-value=8.8e-12 Score=105.83 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=80.5
Q ss_pred CCCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCC---------CC---
Q 027763 5 KIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYD---------DG--- 72 (219)
Q Consensus 5 ~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~---------~~--- 72 (219)
+..++||++++.++.||++|++.|+++|.++||+|++++++...+.+.. .+++++.++.... ..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh----CCCeeEecCCccchHhhhhhhccCccc
Confidence 3456899999999999999999999999999999999998765544433 3567776652100 00
Q ss_pred CCC-Cccc-HHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 73 GFS-EAES-IDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 73 ~~~-~~~~-~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
... .... .......+.......+.++.+.+.+ .+||+||+|....++..+|+.+|||++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 000 0000 1111111222112222333332322 25899999987788889999999999987654
No 17
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.27 E-value=4.1e-12 Score=108.55 Aligned_cols=121 Identities=16% Similarity=0.103 Sum_probs=78.8
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCC-CC--CCcccHHHHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDG-GF--SEAESIDAYLQ 85 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~--~~~~~~~~~~~ 85 (219)
+||++++.++.||++|++.|+++|.++||+|+|++++...+.+.. .+++++.++...... +. ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~----~g~~~~~l~~~~~~~~~~~~~~~~~~~~--- 73 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE----VGVPMVPVGRAVRAGAREPGELPPGAAE--- 73 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH----TTCCEEECSSCSSGGGSCTTCCCTTCGG---
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH----cCCceeecCCCHHHHhccccCCHHHHHH---
Confidence 479999999999999999999999999999999999876555443 367888876322110 00 00111111
Q ss_pred HHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccH---HHHHHHcCCCeeEEechhh
Q 027763 86 NMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWA---LDVAKGFGLFSAAFFTQTC 140 (219)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~---~~vA~~lgiP~v~~~~~~a 140 (219)
.+.......++++.+.+ .++|+||+|....++ ..+|+++|||++..+.+..
T Consensus 74 ~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 74 VVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp GHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 11111122233333322 247999999766554 7899999999998776653
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.17 E-value=6.8e-11 Score=99.96 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=76.3
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEc-cCCC--CCC---CC---CC---
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTI-SDGY--DDG---GF---SE--- 76 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l-~~~~--~~~---~~---~~--- 76 (219)
+||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.+ +... ... .. ..
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG----AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFG 77 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH----BTCEEEEC--------------CCSCCGGGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh----CCCceeeecCCccchhhhhhhcccccccccc
Confidence 689999999999999999999999999999999998765444332 25677666 3211 000 00 00
Q ss_pred -c--ccHHHHHHHHHHHh----hHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 77 -A--ESIDAYLQNMEVAG----LKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 77 -~--~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
. ......+......+ ...+.++.+.+.+ .+||+||+|.+..++..+|+++|||++.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 78 QRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred cccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 0 01111111111111 0113333332222 25799999987777888999999999988544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.12 E-value=1.5e-10 Score=98.26 Aligned_cols=125 Identities=17% Similarity=0.101 Sum_probs=80.3
Q ss_pred CCCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCC----C--------CCC
Q 027763 5 KIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDG----Y--------DDG 72 (219)
Q Consensus 5 ~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~----~--------~~~ 72 (219)
+..++||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.++.. + ...
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK----LGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----TTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh----cCCceeecCcccccchhhhhhhhhccc
Confidence 4467899999999999999999999999999999999998764433332 36788877631 0 000
Q ss_pred CCCC------cccHHHHHHHH-HHHhhHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 73 GFSE------AESIDAYLQNM-EVAGLKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 73 ~~~~------~~~~~~~~~~~-~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
+... .......+... .......+.+++++ .+||+||+|....++..+|+++|||++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 0000 00111111111 11111233344443 25899999987777888999999999887544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.65 E-value=1.7e-07 Score=78.94 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=67.2
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccccc-c-cCCCCCCCCeEEEEccC-CCCCCCCCCcccHHHHHHH
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYK-T-KKPPQPSDSVQIDTISD-GYDDGGFSEAESIDAYLQN 86 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~-~-~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~ 86 (219)
+|++.....-||++|.+.||++|.++||+|+|+++....+ . +.. .++++..++. +++..+. ...+...+..
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~----~g~~~~~i~~~~~~~~~~--~~~~~~~~~~ 77 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK----AGLPLHLIQVSGLRGKGL--KSLVKAPLEL 77 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG----GTCCEEECC----------------CHHHH
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh----cCCcEEEEECCCcCCCCH--HHHHHHHHHH
Confidence 6877665545999999999999999999999999764321 1 222 3577777762 2221010 1111111111
Q ss_pred HHHHhhHHHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHcCCCeeEEe
Q 027763 87 MEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGFGLFSAAFF 136 (219)
Q Consensus 87 ~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~~~ 136 (219)
+.. ......++++. +||+||.+..... +...|+.+|||.++.-
T Consensus 78 ~~~--~~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe 122 (365)
T 3s2u_A 78 LKS--LFQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE 122 (365)
T ss_dssp HHH--HHHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE
T ss_pred HHH--HHHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe
Confidence 111 11233445543 5799999875543 3566889999999763
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.82 E-value=0.00015 Score=59.99 Aligned_cols=113 Identities=15% Similarity=0.118 Sum_probs=69.4
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccccc--ccCCCCCCCCeEEEEccC-CCCCCCCCCcccHHHHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYK--TKKPPQPSDSVQIDTISD-GYDDGGFSEAESIDAYLQ 85 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~--~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~ 85 (219)
++|+++.....||..++..|++.|+++||+|++++...... .+.. .++++..++. +++. . .....+.
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~-----~-~~~~~~~ 76 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK----HGIEIDFIRISGLRG-----K-GIKALIA 76 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG----GTCEEEECCCCCCTT-----C-CHHHHHT
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc----cCCceEEecCCccCc-----C-ccHHHHH
Confidence 68999987666999999999999999999999999765321 1221 2577776652 1111 1 1111110
Q ss_pred ---HHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCc--ccHHHHHHHcCCCeeEEec
Q 027763 86 ---NMEVAGLKTLAELITKYKSSSNPIDCVVYDAFL--YWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 86 ---~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~--~~~~~vA~~lgiP~v~~~~ 137 (219)
.... ....+.+++++ .++|+|+++... .++..+++.+|+|.++...
T Consensus 77 ~~~~~~~-~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 77 APLRIFN-AWRQARAIMKA-----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp CHHHHHH-HHHHHHHHHHH-----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHH-HHHHHHHHHHh-----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 0011 11123334443 258999988643 2356778889999986543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.88 E-value=0.021 Score=47.79 Aligned_cols=129 Identities=12% Similarity=0.068 Sum_probs=67.3
Q ss_pred CCceEEEEeCC----C-ccChhHHHHHHHHHHhCCCcEEEEeCcccccccC---------C-----C--CCCCCeEEEEc
Q 027763 7 HRAHVLIVPYP----S-QGHINPTFQFAKRLASKGLKITLAITNFIYKTKK---------P-----P--QPSDSVQIDTI 65 (219)
Q Consensus 7 ~~~hvvv~p~p----~-~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~---------~-----~--~~~~~i~~~~l 65 (219)
++++|+++..- . -|--.-+..|++.|+++||+|+++++......-. . . ....++++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 35788887722 2 3555668999999999999999999653221100 0 0 00135666665
Q ss_pred cCCCCCCCCCCcccHH-HHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHcCCCeeEEec
Q 027763 66 SDGYDDGGFSEAESID-AYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 66 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~~~~ 137 (219)
+...-. ......... .+...+... ...+..+++.+..+..++|+|.+-..... +..+++..|+|.+...-
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 153 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred cchhcc-ccccccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence 531100 000011011 111111111 12344455554222246899986554332 45667888999887544
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.52 E-value=0.0087 Score=50.47 Aligned_cols=123 Identities=14% Similarity=0.117 Sum_probs=66.1
Q ss_pred CCceEEEEeC---C--------CccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCC
Q 027763 7 HRAHVLIVPY---P--------SQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFS 75 (219)
Q Consensus 7 ~~~hvvv~p~---p--------~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 75 (219)
++++|+++.. | .-|+-..+..|++.|+++||+|++++...............+++++.++..... ...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~-~~~ 97 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYE-GLS 97 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSS-SCC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcc-ccc
Confidence 5679999884 2 248889999999999999999999987643211000000136777776532111 111
Q ss_pred CcccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcc-c-HHHHHHHcCCCeeEEech
Q 027763 76 EAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLY-W-ALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~-~-~~~vA~~lgiP~v~~~~~ 138 (219)
..+....+..+.. ..++..++. . .++|+|++..... + +..+++.+|+|.+...-.
T Consensus 98 -~~~~~~~~~~~~~---~~~~~~~~~---~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 98 -KEELPTQLAAFTG---GMLSFTRRE---K-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp -GGGGGGGHHHHHH---HHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred -hhHHHHHHHHHHH---HHHHHHHhc---c-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 1111111111111 011111222 1 2389998765332 2 345778889999875443
No 24
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.33 E-value=0.034 Score=47.89 Aligned_cols=128 Identities=16% Similarity=0.044 Sum_probs=66.5
Q ss_pred CcccCCCCceEEEEeC---C------------CccChhHHHHHHHHHHhCCCcEEEEeCcccccc-------cCCCCCCC
Q 027763 1 MEEKKIHRAHVLIVPY---P------------SQGHINPTFQFAKRLASKGLKITLAITNFIYKT-------KKPPQPSD 58 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~---p------------~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~-------~~~~~~~~ 58 (219)
|.++. +++||+++.. | .-|.-.-+..|++.|+++||+|++++....... ........
T Consensus 1 m~~m~-~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (499)
T 2r60_A 1 MVEMT-RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETN 79 (499)
T ss_dssp -------CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCS
T ss_pred Ccccc-ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCC
Confidence 66664 3478998874 2 247778899999999999999999987532211 11000024
Q ss_pred CeEEEEccCCCCCCCCCCcccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCc-cc-HHHHHHHcCCCeeEEe
Q 027763 59 SVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFL-YW-ALDVAKGFGLFSAAFF 136 (219)
Q Consensus 59 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~-~~-~~~vA~~lgiP~v~~~ 136 (219)
+++++.++..... ... ..........+. ..+..++++. ..++|+|.+-... .+ +..+++.+|+|.+...
T Consensus 80 gv~v~~~~~~~~~-~~~-~~~~~~~~~~~~----~~l~~~l~~~---~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~ 150 (499)
T 2r60_A 80 KVRIVRIPFGGDK-FLP-KEELWPYLHEYV----NKIINFYREE---GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTG 150 (499)
T ss_dssp SEEEEEECCSCSS-CCC-GGGCGGGHHHHH----HHHHHHHHHH---TCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CeEEEEecCCCcC-CcC-HHHHHHHHHHHH----HHHHHHHHhc---CCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEc
Confidence 6888777632111 111 111111111111 1233344432 1258998865432 22 3457788999988654
Q ss_pred ch
Q 027763 137 TQ 138 (219)
Q Consensus 137 ~~ 138 (219)
-.
T Consensus 151 H~ 152 (499)
T 2r60_A 151 HS 152 (499)
T ss_dssp SS
T ss_pred cC
Confidence 43
No 25
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=94.62 E-value=0.12 Score=42.75 Aligned_cols=42 Identities=14% Similarity=0.104 Sum_probs=31.9
Q ss_pred CCceEEEEeC---CC-ccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 7 HRAHVLIVPY---PS-QGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 7 ~~~hvvv~p~---p~-~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
++++|+++.. +. .|+-.-+..|++.|.++||+|++++.....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 4578887762 22 466688999999999999999999987543
No 26
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.52 E-value=1.2 Score=36.59 Aligned_cols=113 Identities=16% Similarity=0.200 Sum_probs=60.7
Q ss_pred CceEEEEeCCCc-cChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCC-CCCCCCCCcccHHHHHH
Q 027763 8 RAHVLIVPYPSQ-GHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDG-YDDGGFSEAESIDAYLQ 85 (219)
Q Consensus 8 ~~hvvv~p~p~~-GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~~~~~~ 85 (219)
++++....+|.. |.-.-...|++.|+++||+|++++...... ... ...++.+..++.. .+. ... ... ...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~--~~~~i~~~~~~~~~~~~--~~~-~~~--~~~ 86 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK--VYPNIYFHEVTVNQYSV--FQY-PPY--DLA 86 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C--CCTTEEEECCCCC------CCS-CCH--HHH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc--cCCceEEEecccccccc--ccc-ccc--cHH
Confidence 356777777765 677888999999999999999998854321 111 1246766655421 110 000 000 010
Q ss_pred HHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcc--cHHHHHHHc---CCCeeEEech
Q 027763 86 NMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLY--WALDVAKGF---GLFSAAFFTQ 138 (219)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~--~~~~vA~~l---giP~v~~~~~ 138 (219)
. ...+.+++++ .++|+|++..... ++..+++++ ++|.+...-.
T Consensus 87 ~-----~~~l~~~l~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 134 (394)
T 2jjm_A 87 L-----ASKMAEVAQR-----ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 134 (394)
T ss_dssp H-----HHHHHHHHHH-----HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred H-----HHHHHHHHHH-----cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 1 1123444443 2579998764332 234455544 5998776443
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=93.12 E-value=0.23 Score=40.66 Aligned_cols=103 Identities=16% Similarity=0.092 Sum_probs=62.2
Q ss_pred CceEEEEeC--C--CccChhHHHHHHHHHHhCCCcEEEEeCccccc---ccCCCCCCCCeEEEEccCCCCCCCCCCcccH
Q 027763 8 RAHVLIVPY--P--SQGHINPTFQFAKRLASKGLKITLAITNFIYK---TKKPPQPSDSVQIDTISDGYDDGGFSEAESI 80 (219)
Q Consensus 8 ~~hvvv~p~--p--~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~---~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 80 (219)
+++|+++.. + .-|.-.-+..|++.| +||+|++++...... .... ..++++..++.... .. ..
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~---~~ 72 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK---TLDYEVIRWPRSVM---LP---TP 72 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT---TCSSEEEEESSSSC---CS---CH
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc---ccceEEEEcccccc---cc---ch
Confidence 467888763 3 348888899999999 799999998865432 1111 23577776653211 11 11
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCc--ccHHHHHHHcCCCeeEE
Q 027763 81 DAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFL--YWALDVAKGFGLFSAAF 135 (219)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~--~~~~~vA~~lgiP~v~~ 135 (219)
. . ...+.+++++ .++|+|++.... .+...+++++|+|.+++
T Consensus 73 -~---~-----~~~l~~~~~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 73 -T---T-----AHAMAEIIRE-----REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp -H---H-----HHHHHHHHHH-----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred -h---h-----HHHHHHHHHh-----cCCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 0 0 1123444443 358999865433 34567789999995553
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=91.86 E-value=0.65 Score=37.97 Aligned_cols=109 Identities=15% Similarity=0.010 Sum_probs=56.6
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhC-CCcEEEEeCccccc---c-cCCCCCCCCeEE-EEccCCCCCCCCCCcccHH
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASK-GLKITLAITNFIYK---T-KKPPQPSDSVQI-DTISDGYDDGGFSEAESID 81 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~~~~---~-~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~ 81 (219)
.++|+++... .+.......|++.|.++ ||+|.++.+..... . ... -++.+ ..++ +. + ......
T Consensus 5 mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~--~--~~~~~~ 73 (376)
T 1v4v_A 5 MKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL----FGIQEDRNLD--VM--Q--ERQALP 73 (376)
T ss_dssp CEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT----TTCCCSEECC--CC--S--SCCCHH
T ss_pred ceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHHH----cCCCcccccc--cC--C--CCccHH
Confidence 3688888732 33345567889999998 79988776643211 1 111 12222 1222 11 1 011121
Q ss_pred HHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEe--CCCcccH-HHHHHHcCCCeeEEe
Q 027763 82 AYLQNMEVAGLKTLAELITKYKSSSNPIDCVVY--DAFLYWA-LDVAKGFGLFSAAFF 136 (219)
Q Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~~~ 136 (219)
... .. ....+.+++++ .+||+|++ +....|. ..+|+.+|||.+.+.
T Consensus 74 ~~~---~~-~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 74 DLA---AR-ILPQAARALKE-----MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp HHH---HH-HHHHHHHHHHH-----TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHH---HH-HHHHHHHHHHH-----cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 111 11 11234444543 35799987 3344454 567889999987653
No 29
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=90.97 E-value=0.51 Score=43.65 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=63.3
Q ss_pred ceEEEEeCCCc-------------cChhHHH--------HHHHHHHhCCCcEE----EEeCcccccc-------cCCCCC
Q 027763 9 AHVLIVPYPSQ-------------GHINPTF--------QFAKRLASKGLKIT----LAITNFIYKT-------KKPPQP 56 (219)
Q Consensus 9 ~hvvv~p~p~~-------------GH~~P~l--------~La~~L~~rG~~VT----~~t~~~~~~~-------~~~~~~ 56 (219)
.+|+++..-|. |...=.+ +||++|+++||+|| ++|-...... .....+
T Consensus 279 ~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~ 358 (816)
T 3s28_A 279 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYD 358 (816)
T ss_dssp CEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTT
T ss_pred eEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCCccCCcceeecC
Confidence 56777775553 4444454 57888889999998 7765432211 111111
Q ss_pred CCCeEEEEccCCCCC---CCCCCcccHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCc-cc-HHHHHHHcCCC
Q 027763 57 SDSVQIDTISDGYDD---GGFSEAESIDAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFL-YW-ALDVAKGFGLF 131 (219)
Q Consensus 57 ~~~i~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~-~~-~~~vA~~lgiP 131 (219)
..+++++.+|-+-.. ...-....+...+..+.. ..+..+++.. ..+||+|.+-... .+ +..+|+.+|+|
T Consensus 359 ~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~---~~l~~il~~~---~~~PDVIHsH~~~sglva~llar~~gvP 432 (816)
T 3s28_A 359 SEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE---DAAVELSKEL---NGKPDLIIGNYSDGNLVASLLAHKLGVT 432 (816)
T ss_dssp CSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHH---HHHHHHHHHC---SSCCSEEEEEHHHHHHHHHHHHHHHTCC
T ss_pred cCCeEEEEecCCCccccccccccHHHHHHHHHHHHH---HHHHHHHHhc---CCCCeEEEeCCchHHHHHHHHHHHcCCC
Confidence 247888877632110 000011122222222221 2233444432 2468999865322 22 46788999999
Q ss_pred eeEEe
Q 027763 132 SAAFF 136 (219)
Q Consensus 132 ~v~~~ 136 (219)
.+...
T Consensus 433 ~V~T~ 437 (816)
T 3s28_A 433 QCTIA 437 (816)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 87653
No 30
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=88.56 E-value=0.86 Score=36.93 Aligned_cols=51 Identities=12% Similarity=0.206 Sum_probs=36.1
Q ss_pred eEEEEe---CCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEcc
Q 027763 10 HVLIVP---YPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTIS 66 (219)
Q Consensus 10 hvvv~p---~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~ 66 (219)
+|+++. .+.-|.-.-+..|++.|+++||+|++++...... . ..++++..++
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-~-----~~~~~v~~~~ 55 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-C-----PKAFELIQVP 55 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-C-----CTTCEEEECC
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-C-----CCCcEEEEEc
Confidence 466553 2445777889999999999999999999864221 1 1357776665
No 31
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.30 E-value=0.56 Score=41.13 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=29.2
Q ss_pred Cccc-CCCCceEEEEeC---CC--c-cChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 1 MEEK-KIHRAHVLIVPY---PS--Q-GHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 1 m~~~-~~~~~hvvv~p~---p~--~-GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
|..+ ..+++||+++.+ |. . |=-.-+-.|+++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5443 346789999962 21 1 22245678999999999999999864
No 32
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.45 E-value=0.48 Score=39.98 Aligned_cols=40 Identities=15% Similarity=0.283 Sum_probs=29.5
Q ss_pred CCceEEEEeCC-Cc----cChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYP-SQ----GHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p-~~----GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++++|+++... .. |=.+-+.+|+++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 55788776632 11 323458899999999999999999863
No 33
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=86.40 E-value=5.3 Score=32.11 Aligned_cols=102 Identities=12% Similarity=0.012 Sum_probs=64.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhC--CCcEEEEeCcccccccCCCCCCCCeE-EEEccCCCCCCCCCCcccHHHHHHH
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASK--GLKITLAITNFIYKTKKPPQPSDSVQ-IDTISDGYDDGGFSEAESIDAYLQN 86 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~r--G~~VT~~t~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~~~~ 86 (219)
+|+++-..+.|.+.=...+.+.|.++ |.+|++++.+.+.+.+.. .+.++ ++.++. .. . ....
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~---~p~i~~v~~~~~--~~-~---~~~~------ 66 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR---MPEVNEAIPMPL--GH-G---ALEI------ 66 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT---CTTEEEEEEC-------------CH------
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCccCEEEEecC--Cc-c---ccch------
Confidence 68999888889999999999999986 999999999876654443 34553 443321 10 0 0000
Q ss_pred HHHHhhHHHHHHHHHhhcCCCCccEEEeCCCccc-HHHHHHHcCCCeeEE
Q 027763 87 MEVAGLKTLAELITKYKSSSNPIDCVVYDAFLYW-ALDVAKGFGLFSAAF 135 (219)
Q Consensus 87 ~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~~-~~~vA~~lgiP~v~~ 135 (219)
..+.++.+.+.+ .++|++| |....+ ...++...|+|..+.
T Consensus 67 ------~~~~~l~~~l~~--~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 67 ------GERRKLGHSLRE--KRYDRAY-VLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ------HHHHHHHHHTTT--TTCSEEE-ECSCCSGGGHHHHHTTCSEEEE
T ss_pred ------HHHHHHHHHHHh--cCCCEEE-ECCCChHHHHHHHHhCCCEEec
Confidence 122345555543 4699988 543333 567788889997433
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=86.38 E-value=2 Score=34.93 Aligned_cols=112 Identities=12% Similarity=-0.025 Sum_probs=56.6
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCC-cEEEEeCcccccccCCCCCCCCeEE-EEccCCCCCCCCCCcccHHHHHHHH
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGL-KITLAITNFIYKTKKPPQPSDSVQI-DTISDGYDDGGFSEAESIDAYLQNM 87 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~-~VT~~t~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 87 (219)
+|+++.. ..++...+..|+++|.++|+ ++.++.+.............-++.+ ..++ +. + ........ .
T Consensus 2 kIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~---~ 71 (384)
T 1vgv_A 2 KVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLN--IM--Q--PGQGLTEI---T 71 (384)
T ss_dssp EEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHTCCCSEECC--CC--S--TTSCHHHH---H
T ss_pred eEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcCCCCCccee--cC--C--CCccHHHH---H
Confidence 6777653 35778888999999999994 8876654322111000000012222 2222 11 1 01122111 1
Q ss_pred HHHhhHHHHHHHHHhhcCCCCccEEEeC--CCcccH-HHHHHHcCCCeeEEec
Q 027763 88 EVAGLKTLAELITKYKSSSNPIDCVVYD--AFLYWA-LDVAKGFGLFSAAFFT 137 (219)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~d~vI~D--~~~~~~-~~vA~~lgiP~v~~~~ 137 (219)
.. ....+.+++++. +||+|++- ....|. ..+|+.+|+|.+....
T Consensus 72 ~~-~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 72 CR-ILEGLKPILAEF-----KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HH-HHHHHHHHHHHh-----CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 11 112344555543 57999863 234453 4667888999886543
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=85.80 E-value=0.9 Score=36.55 Aligned_cols=28 Identities=14% Similarity=-0.047 Sum_probs=24.7
Q ss_pred ccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 19 QGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 19 ~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.|.-.-...|++.|.++||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4677789999999999999999998765
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=83.30 E-value=1.7 Score=35.92 Aligned_cols=40 Identities=13% Similarity=0.064 Sum_probs=31.5
Q ss_pred CCceEEEEeC-C-CccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPY-P-SQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~-p-~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++++|+++.. + .-|+-..+..|++.|.++||+|++++...
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 3568776653 3 24888899999999999999999988754
No 37
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=82.44 E-value=1.4 Score=32.12 Aligned_cols=39 Identities=21% Similarity=0.259 Sum_probs=35.0
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++++|++...++-+|-.-..-++..|..+|++|.++-..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 567899999999999999999999999999999987654
No 38
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=82.42 E-value=2.6 Score=33.67 Aligned_cols=87 Identities=18% Similarity=0.152 Sum_probs=50.6
Q ss_pred CCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccCCCCCCCCCCcccHHHHHHHHHHHhhHHH
Q 027763 16 YPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISDGYDDGGFSEAESIDAYLQNMEVAGLKTL 95 (219)
Q Consensus 16 ~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 95 (219)
--|.||+.=.+.||++|. +|+|++.......+.. -++.+..++. .+.. .+
T Consensus 12 ~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~----~g~~v~~l~~----------~d~~------------~~ 61 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE----IPYPVYELSS----------ESIY------------EL 61 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG----CCSCEEECSS----------SCHH------------HH
T ss_pred CccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH----CCCeEEEcCc----------cCHH------------HH
Confidence 346799999999999999 7999986543222221 1344443321 1111 12
Q ss_pred HHHHHHhhcCCCCccEEEeCCCcc---cHHHHHHHcCCCeeEEec
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLY---WALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~---~~~~vA~~lgiP~v~~~~ 137 (219)
.+++++. ++|+||.|.... |-..+.+..|++.+++-=
T Consensus 62 ~~~l~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD 101 (282)
T 3hbm_A 62 INLIKEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFDD 101 (282)
T ss_dssp HHHHHHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECS
T ss_pred HHHHHhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEec
Confidence 2333332 469999998664 333444446887776633
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=79.17 E-value=1.8 Score=36.64 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=27.8
Q ss_pred eEEEEeC---C---CccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 10 HVLIVPY---P---SQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 10 hvvv~p~---p---~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
||+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 6776653 2 22445678899999999999999998753
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=77.89 E-value=2.1 Score=36.23 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=27.3
Q ss_pred eEEEEeC---C---CccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 10 HVLIVPY---P---SQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 10 hvvv~p~---p---~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
||+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 6776653 2 12434667899999999999999998753
No 41
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=77.20 E-value=4.4 Score=33.72 Aligned_cols=110 Identities=12% Similarity=0.013 Sum_probs=58.6
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhC-CCcEEEEeCccccc---ccCCCCCCCCeEE-EEccCCCCCCCCCCcccHHH
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASK-GLKITLAITNFIYK---TKKPPQPSDSVQI-DTISDGYDDGGFSEAESIDA 82 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~~~~---~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~ 82 (219)
+.+|+++. .......=+..|.++|.++ |+++.++.|....+ ..... -+++. ..+. +- ........
T Consensus 25 m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~---~~i~~~~~l~--~~----~~~~~~~~ 94 (396)
T 3dzc_A 25 MKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL---FSITPDFDLN--IM----EPGQTLNG 94 (396)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH---TTCCCSEECC--CC----CTTCCHHH
T ss_pred CCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh---cCCCCceeee--cC----CCCCCHHH
Confidence 34677666 5667788888999999987 78887665543221 10000 01110 0111 10 01112222
Q ss_pred HHHHHHHHhhHHHHHHHHHhhcCCCCccEEEe--CCCcccH-HHHHHHcCCCeeEEe
Q 027763 83 YLQNMEVAGLKTLAELITKYKSSSNPIDCVVY--DAFLYWA-LDVAKGFGLFSAAFF 136 (219)
Q Consensus 83 ~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~~~ 136 (219)
. ... ....+.+++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 95 ~---~~~-~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 95 V---TSK-ILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp H---HHH-HHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred H---HHH-HHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1 111 123455666653 4788874 4444464 578889999987653
No 42
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=77.05 E-value=4.4 Score=31.82 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++.+|++.+.++-.|-....-++..|.++|++|.++...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999988654
No 43
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=76.90 E-value=3.6 Score=31.03 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=35.8
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++.+|++.+.++-.|-....-++..|.++|++|.++....
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4568999999999999999999999999999999887643
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=75.69 E-value=7.9 Score=32.16 Aligned_cols=110 Identities=14% Similarity=0.079 Sum_probs=59.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccccc-ccCCCCCCCCeEEEEccC-CCCCCCCCCcccHHHHHHHH
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYK-TKKPPQPSDSVQIDTISD-GYDDGGFSEAESIDAYLQNM 87 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~-~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 87 (219)
+|.++ +.++--++=|.+|.++|.++ ++..++.|....+ .+.... ..++.+ .-|+ .+.. .. .+.... .
T Consensus 11 ~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~-~~~~~i-~~~~~~l~~---~~-~~~~~~---~ 79 (385)
T 4hwg_A 11 KVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF-FDDMGI-RKPDYFLEV---AA-DNTAKS---I 79 (385)
T ss_dssp EEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH-HC-CCC-CCCSEECCC---CC-CCSHHH---H
T ss_pred heeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH-HhhCCC-CCCceecCC---CC-CCHHHH---H
Confidence 44443 46778888899999999887 8887777654322 111100 001111 0111 0111 11 122211 1
Q ss_pred HHHhhHHHHHHHHHhhcCCCCccEEEe--CCCcccHHHHHHHcCCCeeEEe
Q 027763 88 EVAGLKTLAELITKYKSSSNPIDCVVY--DAFLYWALDVAKGFGLFSAAFF 136 (219)
Q Consensus 88 ~~~~~~~l~~~l~~l~~~~~~~d~vI~--D~~~~~~~~vA~~lgiP~v~~~ 136 (219)
.. +...+++++++. +||+||. |....|+...|.++|||.+.+.
T Consensus 80 ~~-~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 80 GL-VIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HH-HHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HH-HHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 11 123456666654 4788764 5556677788899999987664
No 45
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=75.34 E-value=17 Score=29.58 Aligned_cols=105 Identities=12% Similarity=0.071 Sum_probs=68.2
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhC--CCcEEEEeCcccccccCCCCCCCCeE-EEEccCCCCCCCCCCcccHHHH
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASK--GLKITLAITNFIYKTKKPPQPSDSVQ-IDTISDGYDDGGFSEAESIDAY 83 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~r--G~~VT~~t~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~ 83 (219)
+..+|+++-..+.|.+.-...+.+.|.++ +.+|++++.+.+.+.++. .+.|+ ++.++. . + ...
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~---~p~vd~vi~~~~---~-~------~~~- 72 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY---NPNIDELIVVDK---K-G------RHN- 72 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS---CTTCSEEEEECC---S-S------HHH-
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCCccEEEEeCc---c-c------ccc-
Confidence 34589999999999999999999999986 899999999987766554 35565 444431 0 0 000
Q ss_pred HHHHHHHhhHHHHHHHHHhhcCCCCc-cEEEeCCCcccHHHHHHHcCCCeeE
Q 027763 84 LQNMEVAGLKTLAELITKYKSSSNPI-DCVVYDAFLYWALDVAKGFGLFSAA 134 (219)
Q Consensus 84 ~~~~~~~~~~~l~~~l~~l~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v~ 134 (219)
.+. .+.++++++.+ .++ |++|.=....-...++...|+|..+
T Consensus 73 --~~~-----~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 73 --SIS-----GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --HHH-----HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --cHH-----HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 011 12234444432 358 9887433333356788888998643
No 46
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.16 E-value=6.6 Score=29.89 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=33.9
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccccccc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTK 51 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~ 51 (219)
+.||++.-..+.|-+. ...|.++|.++| +|.++.|+.-..-+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 4578888888877766 899999999999 99999998755433
No 47
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=73.93 E-value=7.3 Score=32.51 Aligned_cols=112 Identities=10% Similarity=-0.026 Sum_probs=56.4
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhC--CCcEEEEeCcccccccCCCCCCCCeEE-EEccCCCCCCCCCCcccHHHHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASK--GLKITLAITNFIYKTKKPPQPSDSVQI-DTISDGYDDGGFSEAESIDAYLQ 85 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~r--G~~VT~~t~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~~ 85 (219)
.+|+++. .....+.=+..|.++|.++ |+++.++.|....+-.......-+++. ..+. +-. ...+....
T Consensus 28 ~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~--v~~----~~~~~~~~-- 98 (403)
T 3ot5_A 28 IKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLD--IMK----KGQTLAEI-- 98 (403)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECC--CCC-----CCCHHHH--
T ss_pred ceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccc--cCC----CCCCHHHH--
Confidence 4677666 5556677778899999987 688776665532110000000001110 0111 100 11122211
Q ss_pred HHHHHhhHHHHHHHHHhhcCCCCccEEEe--CCCccc-HHHHHHHcCCCeeEEe
Q 027763 86 NMEVAGLKTLAELITKYKSSSNPIDCVVY--DAFLYW-ALDVAKGFGLFSAAFF 136 (219)
Q Consensus 86 ~~~~~~~~~l~~~l~~l~~~~~~~d~vI~--D~~~~~-~~~vA~~lgiP~v~~~ 136 (219)
... ....+.+++++. +||+|+. |....| +...|+++|||.+.+.
T Consensus 99 -~~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 99 -TSR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp -HHH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred -HHH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 111 123455666654 4788874 444455 4678899999987654
No 48
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=73.88 E-value=5.6 Score=27.88 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=33.6
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+++|++...++-+|-.-..=++..|..+|++|..+...
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 35899999899999999999999999999999987654
No 49
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=71.63 E-value=6.2 Score=30.06 Aligned_cols=40 Identities=10% Similarity=-0.014 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++.+|++.+.++-.|-+...-++..|.++|++|..+...-
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v 130 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV 130 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC
Confidence 4678999999999999999999999999999999986643
No 50
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=70.26 E-value=35 Score=28.30 Aligned_cols=26 Identities=23% Similarity=0.394 Sum_probs=19.8
Q ss_pred CCccEEE--eCCCcccHHHHHHHcCCCe
Q 027763 107 NPIDCVV--YDAFLYWALDVAKGFGLFS 132 (219)
Q Consensus 107 ~~~d~vI--~D~~~~~~~~vA~~lgiP~ 132 (219)
.++|.|+ +|.....+..+|+++|+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 3689887 4555566778999999993
No 51
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=67.85 E-value=5.1 Score=27.61 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHH---HcCCCeeEE
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAK---GFGLFSAAF 135 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~---~lgiP~v~~ 135 (219)
-++.++.+.+ .+||+||.|..++. +.++++ +.++|.+.+
T Consensus 42 g~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 42 MQEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 3444554433 46899999998864 455655 457886654
No 52
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=67.38 E-value=4.8 Score=28.38 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=25.5
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.|++++- .|++- ..+++.|.++|++|+++...
T Consensus 4 ~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4788884 35544 78899999999999999874
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=66.46 E-value=6 Score=32.90 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=25.9
Q ss_pred CCceEEEEe---CCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVP---YPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p---~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++++|+++. +| .+.-.-...+++.|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 457888887 45 233233456788999999 99999543
No 54
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=66.38 E-value=8.5 Score=29.29 Aligned_cols=39 Identities=8% Similarity=0.117 Sum_probs=32.4
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
.||++--..+.|-+. ...|.+.|.++|++|.++.|+.-.
T Consensus 5 k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~ 43 (209)
T 3zqu_A 5 ERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQ 43 (209)
T ss_dssp SEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHH
Confidence 478877777777666 889999999999999999997643
No 55
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=65.37 E-value=15 Score=27.00 Aligned_cols=41 Identities=22% Similarity=0.092 Sum_probs=31.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKT 50 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~ 50 (219)
.||++.-..+.|=+ =..+|.+.|.++|++|.++.|+.-.+-
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~f 46 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKF 46 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHH
Confidence 36777666665555 488999999999999999999875543
No 56
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=61.50 E-value=9.1 Score=26.66 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=24.0
Q ss_pred CccEEEeCCCccc--HHHHHHHc-------CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 139 (219)
+||+||.|..++. +.++++++ ++|.+.++..+
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 6899999999975 67777754 47877765543
No 57
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.78 E-value=9.6 Score=28.51 Aligned_cols=45 Identities=24% Similarity=0.285 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEechhhHH
Q 027763 93 KTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQTCAV 142 (219)
Q Consensus 93 ~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~a~~ 142 (219)
+..++.++++.++ .+++||-|.. +..+|+++|+|.+.+.++..+.
T Consensus 129 ~e~~~~i~~l~~~--G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 129 DEITTLISKVKTE--NIKIVVSGKT---VTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGHHHHHHHHHHT--TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHHC--CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHH
Confidence 4566777777653 5899999875 5899999999999888754443
No 58
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.70 E-value=16 Score=28.23 Aligned_cols=40 Identities=18% Similarity=0.294 Sum_probs=35.0
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+.+|++.--||.|=..-++.+|..|+++|++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3567888889999999999999999999999998877754
No 59
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=59.60 E-value=5.7 Score=34.33 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=27.2
Q ss_pred CCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 6 IHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 6 ~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.|+|||++-...-| +.+|++|.++|++||+|....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 356799998744333 567899999999999997643
No 60
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=58.11 E-value=13 Score=25.13 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.2
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+||+++- .|.+- ..+++.|.++|++|+++...
T Consensus 4 ~m~i~IiG---~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 46788873 36553 46789999999999998764
No 61
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=56.76 E-value=15 Score=28.14 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=32.6
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCcccHHHHHHHcCCCeeEEec
Q 027763 92 LKTLAELITKYKSSSNPIDCVVYDAFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 92 ~~~l~~~l~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
.+..++.++++.++ .+++||-|.. +..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 45667778777653 5899999875 58999999999998884
No 62
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=56.33 E-value=19 Score=23.68 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=27.4
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-------CCCeeEEechh
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQT 139 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 139 (219)
.++.++.+.+ .+||+||.|..++. +..+.+++ ++|.++++...
T Consensus 35 ~~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 35 GQIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 3445555432 46899999998754 55666544 57877776543
No 63
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=56.12 E-value=14 Score=27.73 Aligned_cols=38 Identities=8% Similarity=0.135 Sum_probs=29.9
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhC-CCcEEEEeCcccc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASK-GLKITLAITNFIY 48 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~~~ 48 (219)
||++--..+.|-+. ...|.+.|.++ |++|.++.|+.-.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~ 40 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAK 40 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHH
Confidence 56666666666554 89999999999 9999999987543
No 64
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=54.09 E-value=10 Score=26.53 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=27.8
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
.+++++. .|.| +.|++.+++.|.++|.+|+++ ...+
T Consensus 19 ~~~llIa-GG~G-iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEE-CcCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4677666 3334 899999999999999999998 5443
No 65
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=52.85 E-value=30 Score=26.01 Aligned_cols=40 Identities=23% Similarity=0.125 Sum_probs=30.9
Q ss_pred CceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 8 RAHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
..||++--..+ +... =...|.+.|.++|++|.++.|+.-.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 34677665555 5555 7899999999999999999988644
No 66
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=52.38 E-value=8.6 Score=30.15 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=22.9
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
||+|.- +.|.+ -.+|+++|.++||+|+.++-.
T Consensus 2 kILVTG--atGfI--G~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGG--GTGFI--GTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 555443 44544 357899999999999998753
No 67
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=51.92 E-value=21 Score=27.15 Aligned_cols=45 Identities=11% Similarity=0.028 Sum_probs=30.9
Q ss_pred HHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 94 TLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 94 ~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
.+++++++..... ..+.+||+|---.-+...|+++|||.+.+.+.
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4566666653321 24678999864445678999999999887654
No 68
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=51.78 E-value=28 Score=25.69 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=30.6
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKT 50 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~ 50 (219)
||++.-..+.|=+ =..+|.++|.++|++|.++.|+.-..-
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f 43 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNF 43 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 5666665665444 678999999999999999999875543
No 69
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=51.66 E-value=23 Score=27.91 Aligned_cols=48 Identities=13% Similarity=0.030 Sum_probs=29.9
Q ss_pred CcccCCCCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccc
Q 027763 1 MEEKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKT 50 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~ 50 (219)
|+....+++||++..==|. |--=+..|++.|.+ +|+|+++.+..+.+.
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hhhccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 4444556789998873332 22337788888877 889999999876654
No 70
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=51.65 E-value=15 Score=25.35 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=26.6
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
-+.||+++-+...| ..+++.|.++|++|+++....
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 34688888653333 478999999999999998754
No 71
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=50.58 E-value=21 Score=27.00 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=28.3
Q ss_pred ceEEEEeCCCccChhH-HHHHHHHHHhCCCcEEEEeCcccc
Q 027763 9 AHVLIVPYPSQGHINP-TFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P-~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
.||++.-..+ +...- ...|.+.|.++|++|.++.|+.-.
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4677666555 55554 789999999999999999988644
No 72
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=49.64 E-value=24 Score=26.42 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=61.7
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccc------cccCCCCCCCCeEEEEccCCCCCCCCCCcccH
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIY------KTKKPPQPSDSVQIDTISDGYDDGGFSEAESI 80 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~------~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 80 (219)
.+..|+++.-.|.|=..-.+.+|.+.+.+|.+|-|+..-... ..+.. . ++++.....++.- ...+.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~---L-~v~~~~~g~gf~~----~~~~~ 98 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP---H-GVEFQVMATGFTW----ETQNR 98 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG---G-TCEEEECCTTCCC----CGGGH
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh---C-CcEEEEccccccc----CCCCc
Confidence 346799999999999999999999999999999999654321 11121 1 3777766544321 11111
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEeCCCcc
Q 027763 81 DAYLQNMEVAGLKTLAELITKYKSSSNPIDCVVYDAFLY 119 (219)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~vI~D~~~~ 119 (219)
..- .......++...+.+.. ..+|+||.|-+..
T Consensus 99 ~~~----~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 99 EAD----TAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred HHH----HHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 111 11123344555555432 4699999998753
No 73
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=48.35 E-value=24 Score=24.68 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=24.9
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
..+|+++-. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 457888853 4443 557899999999999987643
No 74
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=48.08 E-value=29 Score=23.15 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=25.8
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-------CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 139 (219)
++.++.+.+ .++|+||.|..++. +.++.+++ ++|.++++...
T Consensus 38 ~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 344444432 35899999998754 45555433 57877776544
No 75
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=47.89 E-value=21 Score=28.72 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=27.8
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
..||.|+-..+.| |-.+|+.|+++|++|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4578888888777 667999999999999987553
No 76
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=47.84 E-value=25 Score=26.58 Aligned_cols=44 Identities=20% Similarity=0.181 Sum_probs=29.4
Q ss_pred HHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEec
Q 027763 94 TLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 94 ~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
.++++++++.+.. -.+.+||+|---.-+...|+++|||.+.+..
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 3556666654321 1367889985433467899999999998754
No 77
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=47.52 E-value=25 Score=31.10 Aligned_cols=40 Identities=10% Similarity=-0.053 Sum_probs=36.0
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++.+|++.+.++-.|-+...-++..|..+|++|..+...-
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4678999999999999999999999999999999886654
No 78
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=47.41 E-value=12 Score=27.71 Aligned_cols=18 Identities=22% Similarity=0.287 Sum_probs=16.1
Q ss_pred HHHHHHHHhCCCcEEEEe
Q 027763 26 FQFAKRLASKGLKITLAI 43 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~t 43 (219)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678999999999999984
No 79
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=46.73 E-value=28 Score=26.22 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=30.8
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHh-CCCcEEEEeCccccccc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLAS-KGLKITLAITNFIYKTK 51 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~-rG~~VT~~t~~~~~~~~ 51 (219)
+.||++.-..+.+ ..=..+|.++|.+ +|++|.++.|+.-..-+
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 3477777766655 4446899999999 89999999998755433
No 80
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=46.58 E-value=29 Score=26.19 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=30.0
Q ss_pred HHHHHHHhhcC--CCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 95 LAELITKYKSS--SNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 95 l~~~l~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
++.+++.+... +-.+.+||++.--..+...|+++|||.+.+.+.
T Consensus 14 L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 14 LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 45555554332 123678888876556778899999999877653
No 81
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=46.21 E-value=21 Score=26.69 Aligned_cols=39 Identities=15% Similarity=0.028 Sum_probs=30.5
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
.||++.-..+.|=+. ..+|.+.|.++|++|.++.|+.-.
T Consensus 9 k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 9 KKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAE 47 (194)
T ss_dssp CEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHH
Confidence 367777666655554 789999999999999999987644
No 82
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=45.60 E-value=16 Score=28.29 Aligned_cols=21 Identities=24% Similarity=0.241 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCCcEEEEeCcc
Q 027763 26 FQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~t~~~ 46 (219)
..+|++|+++|++||++..+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 567999999999999998765
No 83
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=45.09 E-value=44 Score=26.48 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHcCCCeeEEechhhHHHHHH
Q 027763 93 KTLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGFGLFSAAFFTQTCAVNFIY 146 (219)
Q Consensus 93 ~~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~~~~~~a~~~~~~ 146 (219)
..+.++++.+.+ .++.||+++....- +..+|++.|++.+.+-+.+...+.++
T Consensus 224 ~~l~~l~~~ik~--~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m 277 (291)
T 1pq4_A 224 QELKQLIDTAKE--NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNL 277 (291)
T ss_dssp HHHHHHHHHHHT--TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHH
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHH
Confidence 446666666654 35789999887654 57899999999998877765444443
No 84
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=44.95 E-value=24 Score=23.88 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=21.7
Q ss_pred CCccEEEeCCCccc--HHHHHHHc---------CCCeeEEech
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKGF---------GLFSAAFFTQ 138 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~l---------giP~v~~~~~ 138 (219)
.++|+||.|..++. +.++.+++ .+|.+++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 35899999988754 55665544 2677776554
No 85
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=43.57 E-value=29 Score=31.41 Aligned_cols=42 Identities=10% Similarity=0.104 Sum_probs=32.5
Q ss_pred CCCceEEEEeCCCc---cChhHHHH-HHHHHHh-CCCcEEEEeCccc
Q 027763 6 IHRAHVLIVPYPSQ---GHINPTFQ-FAKRLAS-KGLKITLAITNFI 47 (219)
Q Consensus 6 ~~~~hvvv~p~p~~---GH~~P~l~-La~~L~~-rG~~VT~~t~~~~ 47 (219)
.+..||+..|..+. ||..|++. |.+-+.. -||+|+|+.+...
T Consensus 380 ~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 380 AKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp SSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 35678999997776 99999998 6665554 4899999988753
No 86
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=43.39 E-value=21 Score=28.54 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=29.1
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhC-C-CcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASK-G-LKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~r-G-~~VT~~t~~~ 46 (219)
+++|+++. ...++......+++.|.++ | |+|.++++..
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 46888886 3467788888999999987 5 8887776654
No 87
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=43.01 E-value=42 Score=21.67 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHH----HcCCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAK----GFGLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~----~lgiP~v~~~~~~ 139 (219)
++.++.+.+ .+||+||.|..++. +.++.+ ..++|.+++....
T Consensus 36 ~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 36 NEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 444554433 35899999998754 344443 3468877776544
No 88
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=42.97 E-value=30 Score=26.29 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=28.6
Q ss_pred HHHHHHHHhhcC-CCCccEEEeCCCcccHHHHHHHcCCCeeEEec
Q 027763 94 TLAELITKYKSS-SNPIDCVVYDAFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 94 ~l~~~l~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
.++++++++.+. ...+.+||+|---..+...|+++|||.+.+.+
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 344555554321 12367889986444457899999999998754
No 89
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=42.17 E-value=31 Score=25.58 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=31.0
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
||++.-..+.|-+ =..+|.++|.++|++|.++.|+.-.
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 40 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAK 40 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHH
Confidence 6787777777755 4789999999999999999987643
No 90
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=42.02 E-value=20 Score=29.13 Aligned_cols=29 Identities=31% Similarity=0.370 Sum_probs=22.0
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEE
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLA 42 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~ 42 (219)
+||+|+-..--| +-+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 577777533223 77889999999999998
No 91
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=41.86 E-value=17 Score=25.84 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=28.6
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
.+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 3566666 4555 899999999999989899998 65443
No 92
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=41.44 E-value=44 Score=22.99 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=27.0
Q ss_pred ceEEEEeCCC---ccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPS---QGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~---~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+++++-.-+ ......-+.+|...++.||+|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 3555444333 4566788889999999999999776654
No 93
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=40.75 E-value=49 Score=23.73 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=30.8
Q ss_pred ce-EEEEeCCCccChhH-HHHHHHHHHhCCCcEEEEeCccccccc
Q 027763 9 AH-VLIVPYPSQGHINP-TFQFAKRLASKGLKITLAITNFIYKTK 51 (219)
Q Consensus 9 ~h-vvv~p~p~~GH~~P-~l~La~~L~~rG~~VT~~t~~~~~~~~ 51 (219)
++ ++++-.|-.-=.+| .+-++..|..+||+||+..++...+.+
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 44 44555565544444 688999999999999999998765443
No 94
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=40.59 E-value=39 Score=25.51 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=28.0
Q ss_pred HHHHHHHhhcC--CCCccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 95 LAELITKYKSS--SNPIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 95 l~~~l~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
+..+++.+.+. ...+.+||++---..+...|+++|||.+.+.+.
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc
Confidence 34445554432 123567888853344678899999999887654
No 95
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=39.68 E-value=34 Score=25.99 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=28.9
Q ss_pred HHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEec
Q 027763 94 TLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 94 ~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
.++++++++.+.. -.+.+||+|---.-+...|+++|||.+.+-.
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 3555666654321 1367889975333467899999999998754
No 96
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=39.50 E-value=45 Score=25.31 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=21.8
Q ss_pred ceEEEEeCCCccC----hhHHHHHHHHHHhCCCcEEE
Q 027763 9 AHVLIVPYPSQGH----INPTFQFAKRLASKGLKITL 41 (219)
Q Consensus 9 ~hvvv~p~p~~GH----~~P~l~La~~L~~rG~~VT~ 41 (219)
..|.|+.-...+- ..-..+|++.|+++|+.|..
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 3588886555542 23456788888899976543
No 97
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=39.15 E-value=46 Score=25.15 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=28.7
Q ss_pred HHHHHHHhhcCCC--CccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 95 LAELITKYKSSSN--PIDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 95 l~~~l~~l~~~~~--~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
+..+++.+.+..- .+.+||++.--..+...|+++|||.+.+.+.
T Consensus 15 ~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 15 LQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 3445555543221 3567888864444678899999999887654
No 98
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=38.93 E-value=19 Score=29.21 Aligned_cols=23 Identities=9% Similarity=0.005 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCcEEEEeCccc
Q 027763 25 TFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
-..+|+.++.+|++||+++.+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 35689999999999999998653
No 99
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=38.28 E-value=30 Score=28.13 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=27.0
Q ss_pred eEEEEe--CCC-ccChhHHHHHHHHHHhCCCcEEEEeCccc
Q 027763 10 HVLIVP--YPS-QGHINPTFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 10 hvvv~p--~p~-~GH~~P~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
+|+++. +|. -|--.-...|++.|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 566553 233 35567788999999999 99999886543
No 100
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=37.65 E-value=44 Score=25.23 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=29.9
Q ss_pred HHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEec
Q 027763 94 TLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFFT 137 (219)
Q Consensus 94 ~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 137 (219)
.++.+++.+.+.. ..+.+||++.--..+...|+++|||.+.+.+
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 3556666654321 2357888886444567899999999988754
No 101
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=36.52 E-value=42 Score=25.70 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=22.6
Q ss_pred ccEEEeCCCcccHHHHHHHcCCCeeEEech
Q 027763 109 IDCVVYDAFLYWALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 109 ~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~ 138 (219)
+.+||++---..+...|+++|||.+.+.+.
T Consensus 52 I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 52 VAVVISDRADAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp EEEEEESSTTCHHHHHHHHTTCEEEECCGG
T ss_pred EEEEEcCCCchHHHHHHHHcCCCEEEECcc
Confidence 567888854334678999999999887654
No 102
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=36.29 E-value=49 Score=25.46 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=27.2
Q ss_pred ceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 9 AHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 9 ~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
.+.+++. -.+.|=..-.+.|++.|.++|.+|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 3444444 3455888999999999999999999874
No 103
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.17 E-value=33 Score=25.63 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=30.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+|+|..-+|.|=..-...||..|+++|.+|-++-...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5677666777888999999999999999999886544
No 104
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=35.87 E-value=74 Score=22.97 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=26.1
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
++++-....|+-.-+..+++.|+++|+.|..+..
T Consensus 34 ~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 4444445667778899999999999998876654
No 105
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=35.78 E-value=50 Score=26.16 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=28.8
Q ss_pred CcccCCCCceEEEEeCCCccCh-hHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 1 MEEKKIHRAHVLIVPYPSQGHI-NPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 1 m~~~~~~~~hvvv~p~p~~GH~-~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
|.+..-++..+++-|..+.|.. .-..++.+.|.++|.++++..|..
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 5433223445666666676663 334577788888999999887654
No 106
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=35.63 E-value=1.6e+02 Score=23.01 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=23.1
Q ss_pred CccEE-EeCCCcc-cHHHHHHHcCCCeeEEech
Q 027763 108 PIDCV-VYDAFLY-WALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 108 ~~d~v-I~D~~~~-~~~~vA~~lgiP~v~~~~~ 138 (219)
-||+| |.|.--- -+..=|.++|||.+.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 46766 5888654 4678899999999988543
No 107
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=35.54 E-value=75 Score=20.46 Aligned_cols=42 Identities=7% Similarity=0.014 Sum_probs=25.5
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.. .++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 37 ~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 344554433 35899999987753 44444433 57877776544
No 108
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=35.49 E-value=12 Score=32.05 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=26.8
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.+||+++-+.-.| ..||+.|.+.||+||++-...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 45788877654444 468999999999999997653
No 109
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=34.81 E-value=62 Score=21.99 Aligned_cols=43 Identities=7% Similarity=-0.046 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-------cCCCeeEEechh
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFTQT 139 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~~~ 139 (219)
..+.++.+.+ .++|+||.|..++. +..+.++ -++|.+++....
T Consensus 40 ~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 40 GREAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 3444554432 46899999987653 4444443 357877776543
No 110
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=34.59 E-value=44 Score=28.99 Aligned_cols=96 Identities=11% Similarity=0.195 Sum_probs=52.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcccccccCCCCCCCCeEEEEccC--CCCCCCCC-CcccH-HHHH
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFIYKTKKPPQPSDSVQIDTISD--GYDDGGFS-EAESI-DAYL 84 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~~~-~~~~~-~~~~ 84 (219)
.+-+++.. .+-.-+.++|+.|.+.|++ ++.|....+.++. .+|....+.+ ++|+ -++ +.+.+ +...
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfe--I~ATgGTak~L~e----~GI~v~~V~~vTgfPE-il~GRVKTLHP~ih 79 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVE--IISTGSTAKTIAD----TGIPVTPVEQLTGFPE-VLDGRVKTLHPRVH 79 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCE--EEECHHHHHHHHT----TTCCCEEHHHHHSCCC-CTTTTSSSCSHHHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCE--EEEcchHHHHHHH----cCCceeeccccCCCch-hhCCccccCCchhh
Confidence 34455554 4556688999999999976 4577766666654 3566665542 5665 222 12222 2222
Q ss_pred HHHH--HHhhHHHHHHHHHhhcCCCCccEEEeCCC
Q 027763 85 QNME--VAGLKTLAELITKYKSSSNPIDCVVYDAF 117 (219)
Q Consensus 85 ~~~~--~~~~~~l~~~l~~l~~~~~~~d~vI~D~~ 117 (219)
..+. +......+++-+ . .-.++|+||++..
T Consensus 80 gGiLa~r~~~~h~~~l~~-~--~i~~iDlVvvNLY 111 (523)
T 3zzm_A 80 AGLLADLRKSEHAAALEQ-L--GIEAFELVVVNLY 111 (523)
T ss_dssp HHHHCCTTSHHHHHHHHH-H--TCCCCSEEEEECC
T ss_pred hhhccCCCCHHHHHHHHH-C--CCCceeEEEEeCC
Confidence 2221 112333333332 2 1257999999874
No 111
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=34.55 E-value=31 Score=27.30 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=37.4
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhC--CCcEEEEeCcccccccC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASK--GLKITLAITNFIYKTKK 52 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~r--G~~VT~~t~~~~~~~~~ 52 (219)
+|+++-..+.|.+.=...+.+.|.++ +.+||+++.+.+.+.+.
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 78999988999999999999999986 89999999987665444
No 112
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.40 E-value=52 Score=26.01 Aligned_cols=38 Identities=13% Similarity=0.281 Sum_probs=28.3
Q ss_pred CCceEEEEeCCCccChhHH--HHHHHHHHhCC-CcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPT--FQFAKRLASKG-LKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~--l~La~~L~~rG-~~VT~~t~~ 45 (219)
++.+||++. ...+|-.+- ..|++.|.++| ++|++....
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 567899994 334897554 57778888888 999998764
No 113
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=34.25 E-value=67 Score=21.15 Aligned_cols=38 Identities=16% Similarity=0.097 Sum_probs=29.2
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+..+|++++..|.|+-.-.-.+-+.+.++|.++.+-+.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 34689999999999996666777777789988765443
No 114
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=33.94 E-value=79 Score=20.55 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=21.4
Q ss_pred CccEEEeCCCccc--HHHHHHHc-------CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.++++...
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 5899999988754 45555433 46777766543
No 115
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=33.73 E-value=49 Score=25.06 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=23.9
Q ss_pred ceEEEEeCCCccCh--hHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHI--NPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~--~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.-+|++...+.||- .-+..+|+.|+++|+.|-.+....
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG 95 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPG 95 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCC
Confidence 34677776766773 347889999999999887765543
No 116
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=33.71 E-value=83 Score=20.89 Aligned_cols=38 Identities=5% Similarity=0.065 Sum_probs=29.7
Q ss_pred CCceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeC
Q 027763 7 HRAHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~ 44 (219)
++.+|++++..|.|+-. -...+-+.+.++|.++.+-+.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 34579999999999977 467777888889998765443
No 117
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=33.49 E-value=67 Score=21.25 Aligned_cols=44 Identities=16% Similarity=0.223 Sum_probs=24.8
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.....++|+||.|..++. +..+.+++ ++|.+++....
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 3444444321246899999987643 44444432 57777765543
No 118
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=33.09 E-value=44 Score=24.43 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=28.7
Q ss_pred ceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3688888 5442 3689999999999999999987663
No 119
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=32.81 E-value=33 Score=26.29 Aligned_cols=22 Identities=27% Similarity=0.365 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCcEEEEeCcc
Q 027763 25 TFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~~~ 46 (219)
-..+|++|+++|++|+++..+.
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEECCc
Confidence 3578999999999999986543
No 120
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=32.39 E-value=46 Score=24.43 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=28.4
Q ss_pred ceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3688888 4442 3689999999999999999977653
No 121
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=32.13 E-value=32 Score=23.11 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=23.3
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.||+++-. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46887764 4332 56789999999999988654
No 122
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=32.09 E-value=69 Score=21.15 Aligned_cols=31 Identities=13% Similarity=0.159 Sum_probs=20.4
Q ss_pred CccEEEeCCCccc--HHHHHHHc-------CCCeeEEech
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQ 138 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~ 138 (219)
++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 5899999987753 44555433 4677776543
No 123
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=31.90 E-value=36 Score=27.27 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=25.3
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.++|.|+-....| ..+|+.|++.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3578888655555 46789999999999998653
No 124
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=31.73 E-value=32 Score=25.09 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=22.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|++.- +.|.+ -..|+++|+++|++|+.+.-.
T Consensus 2 kvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 444443 34433 368899999999999988754
No 125
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.57 E-value=33 Score=23.33 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=25.6
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
..||+++-+ |.+ -..+++.|.++|++|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 347888754 543 4678999999999999987643
No 126
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=31.47 E-value=64 Score=25.42 Aligned_cols=23 Identities=13% Similarity=0.310 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 22 INPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 22 ~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.|+-.|++++..--.+|+ +.++
T Consensus 19 ~~pl~~~v~~I~Gd~v~V~-lv~~ 41 (286)
T 3gi1_A 19 FYPMYAMTKEVSGDLNDVR-MIQS 41 (286)
T ss_dssp SHHHHHHHHHHHTTSSEEE-EC--
T ss_pred cHHHHHHHHHHhCCeeEEE-EcCC
Confidence 5788888888887667888 6654
No 127
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.45 E-value=32 Score=25.64 Aligned_cols=32 Identities=25% Similarity=0.395 Sum_probs=22.5
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|++.- +.|.+ -.+++++|+++|++|+.+.-.
T Consensus 23 ~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 23 RVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 455443 33433 457899999999999988754
No 128
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=30.74 E-value=50 Score=24.72 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=28.4
Q ss_pred ceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 3688888 4442 3688999999999999999977663
No 129
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=30.67 E-value=75 Score=22.72 Aligned_cols=29 Identities=10% Similarity=-0.027 Sum_probs=19.7
Q ss_pred CCccEEEeCCCccc------HHHHHHHcCCCeeEEe
Q 027763 107 NPIDCVVYDAFLYW------ALDVAKGFGLFSAAFF 136 (219)
Q Consensus 107 ~~~d~vI~D~~~~~------~~~vA~~lgiP~v~~~ 136 (219)
++| +||.+....+ ...+|+++|+|++..+
T Consensus 35 krP-vil~G~g~~~~~a~~~l~~lae~~~iPV~~t~ 69 (170)
T 3cf4_G 35 KRP-LLMVGTLALDPELLDRVVKISKAANIPIAATG 69 (170)
T ss_dssp SSE-EEEECSTTCCHHHHHHHHHHHHHHTCCEEECT
T ss_pred CCC-EEEECCCccchhHHHHHHHHHHHhCCCEEECc
Confidence 355 6777764421 3588999999997653
No 130
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.24 E-value=78 Score=20.79 Aligned_cols=41 Identities=12% Similarity=0.100 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-------cCCCeeEEech
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFTQ 138 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~~ 138 (219)
++.++.+.. .++|+||.|..++. +.++.++ -++|.+++...
T Consensus 40 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 40 AQALEQVAR--RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 344444433 35899999987653 4444433 25677666543
No 131
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=30.20 E-value=51 Score=23.03 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=28.6
Q ss_pred eEEEEe-CCCccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 10 HVLIVP-YPSQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 10 hvvv~p-~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
+++++- ....-...+-+.+|...++.|++|+++-+..-.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 444444 334466788899999999999999998886543
No 132
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.19 E-value=86 Score=21.07 Aligned_cols=42 Identities=7% Similarity=-0.002 Sum_probs=25.3
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.. .++|+||.|..++. +..+.+++ ++|.+++....
T Consensus 41 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 445554432 35899999987653 34444332 57877776544
No 133
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.15 E-value=51 Score=24.72 Aligned_cols=36 Identities=25% Similarity=0.451 Sum_probs=28.5
Q ss_pred ceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 3688888 4442 3688999999999999999987663
No 134
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=30.10 E-value=93 Score=20.11 Aligned_cols=31 Identities=10% Similarity=-0.019 Sum_probs=18.9
Q ss_pred CCccEEEeCCCccc--HHHHHHH-------cCCCeeEEec
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFT 137 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~ 137 (219)
.++|+||.|..++. +.++.++ -++|.+++..
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 35899999987643 3333332 1567666643
No 135
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=30.00 E-value=39 Score=27.39 Aligned_cols=25 Identities=8% Similarity=0.236 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 22 INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 22 ~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+-+|.+|.+.|.++|++|.++|...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4579999999999999999998753
No 136
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.86 E-value=75 Score=23.74 Aligned_cols=32 Identities=6% Similarity=-0.019 Sum_probs=22.4
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+.+++.-.+ | ---.+++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYGGR-G--ALGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEECCC-c--HHHHHHHHHHHhCCCEEEEEeC
Confidence 455555333 3 2357899999999999988754
No 137
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=29.68 E-value=36 Score=24.93 Aligned_cols=20 Identities=5% Similarity=0.177 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCcEEEEeCc
Q 027763 26 FQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~t~~ 45 (219)
..|+++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 68899999999999988754
No 138
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=29.63 E-value=69 Score=24.19 Aligned_cols=27 Identities=7% Similarity=0.014 Sum_probs=24.0
Q ss_pred CCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 17 PSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 17 p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
++.|=..-.+.|++.|+++|.+|.++=
T Consensus 14 t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 14 TEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 566899999999999999999999864
No 139
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.42 E-value=98 Score=20.16 Aligned_cols=33 Identities=15% Similarity=-0.025 Sum_probs=20.9
Q ss_pred CCccEEEeCCCcc-------cHHHHHHH-----cCCCeeEEechh
Q 027763 107 NPIDCVVYDAFLY-------WALDVAKG-----FGLFSAAFFTQT 139 (219)
Q Consensus 107 ~~~d~vI~D~~~~-------~~~~vA~~-----lgiP~v~~~~~~ 139 (219)
.++|+||.|..++ .+..+.++ -++|.+++....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 3589999998654 23344433 268888776554
No 140
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=29.42 E-value=94 Score=22.27 Aligned_cols=35 Identities=11% Similarity=0.019 Sum_probs=25.6
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++++-....|...-+..+++.|+++|+.|..+.-.
T Consensus 30 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 30 VIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 44444455677778899999999999987766544
No 141
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=29.40 E-value=70 Score=22.99 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=23.8
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
.+++-....|+-.-+..+++.|+++|+.|..+.
T Consensus 24 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 24 GVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 344444555777778999999999998876543
No 142
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=29.16 E-value=60 Score=23.00 Aligned_cols=43 Identities=7% Similarity=-0.030 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
..+.++.+.. .+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 40 ~~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 40 KDEALKLAGA--EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHHTT--SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHHhh--CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3455555532 46899999998753 44444432 57877776544
No 143
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=28.90 E-value=80 Score=22.00 Aligned_cols=38 Identities=16% Similarity=0.089 Sum_probs=23.0
Q ss_pred CceEEEEeCCCccCh-hHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHI-NPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~-~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++.|++++-.+.+.- .-...+++.|+++|++|..+.-+
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 456788775444322 22223456788899988776554
No 144
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=28.88 E-value=65 Score=26.79 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=23.6
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+++++++| |-||+- ..|++.+..-|++||++-+..
T Consensus 203 P~~rL~If---GAGhva--~ala~~a~~lg~~V~v~D~R~ 237 (386)
T 2we8_A 203 PRPRMLVF---GAIDFA--AAVAQQGAFLGYRVTVCDARP 237 (386)
T ss_dssp CCCEEEEE---CCSTHH--HHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEE---CCCHHH--HHHHHHHHhCCCEEEEECCch
Confidence 34566655 568873 345566666699999997654
No 145
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=28.80 E-value=81 Score=19.96 Aligned_cols=32 Identities=16% Similarity=-0.001 Sum_probs=21.1
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 4799999987753 44554433 57777776544
No 146
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.73 E-value=90 Score=20.14 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=23.7
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.++.++.+.+ .++|+||.|..++. +..+.+++ ++|.+++....
T Consensus 40 ~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 40 GVDALELLGG--FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHHTT--CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 3445554432 46899999987643 33444322 57877775544
No 147
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=28.73 E-value=91 Score=23.49 Aligned_cols=33 Identities=30% Similarity=0.302 Sum_probs=23.9
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+++++.-.+.| --..+|++|+++|++|.++..
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456777744432 357899999999999987654
No 148
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=28.57 E-value=1.2e+02 Score=19.98 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-------cCCCeeEEechh
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFTQT 139 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~~~ 139 (219)
..+.++.+.. .++|+||.|..++. +.++.++ -++|.+++....
T Consensus 40 ~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 40 GAKALYQVQQ--AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHHHTT--CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHHHhhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 3455555533 46899999987754 3444432 357777776543
No 149
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=28.50 E-value=36 Score=26.34 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=25.9
Q ss_pred ceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|+++.-+|- =- =-+..||.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGN--NGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999885543 21 1378899999999999997543
No 150
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=28.41 E-value=1.1e+02 Score=19.12 Aligned_cols=31 Identities=19% Similarity=0.071 Sum_probs=19.7
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEech
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQ 138 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~ 138 (219)
++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 5899999987753 44444433 4677666543
No 151
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=28.14 E-value=75 Score=20.79 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCccEEEeCCCcc---cHHHHHHH----cCCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLY---WALDVAKG----FGLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~---~~~~vA~~----lgiP~v~~~~~~ 139 (219)
.+.++.+.+ .++|+||.|..++ .+.++.++ .++|.+++....
T Consensus 44 ~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 44 EEAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 344444432 2589999997664 24444443 478888776544
No 152
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=28.10 E-value=74 Score=25.44 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHcCCCeeEEech
Q 027763 93 KTLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 93 ~~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~~~~~ 138 (219)
..+.++++.+.+ .++.||+++....- +..+|++.|++.+.+.+.
T Consensus 226 ~~l~~l~~~ik~--~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~l 271 (312)
T 2o1e_A 226 ASLAKLKTYAKE--HNVKVIYFEEIASSKVADTLASEIGAKTEVLNTL 271 (312)
T ss_dssp HHHHHHHHHTTS--SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCCT
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCcEEEeccc
Confidence 345566665543 35788888877654 568889999988776543
No 153
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=27.77 E-value=1e+02 Score=20.57 Aligned_cols=44 Identities=16% Similarity=0.078 Sum_probs=26.6
Q ss_pred HHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 94 TLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 94 ~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
..++.++.+.+ .++|+||.|.-++. +.++.+++ ++|.+++....
T Consensus 54 ~~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 54 NGQEAIQLLEK--ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp SHHHHHHHHTT--SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CHHHHHHHhhc--cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 34555665543 45899999987643 44444432 57777665543
No 154
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=27.67 E-value=36 Score=27.22 Aligned_cols=18 Identities=28% Similarity=0.161 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCcEEEEe
Q 027763 26 FQFAKRLASKGLKITLAI 43 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~t 43 (219)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 667899999999999984
No 155
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=27.52 E-value=36 Score=26.93 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=24.3
Q ss_pred ccCCCCceEEEEeCCCccChhHHHHHHHHHHhCCC--cEEEEeCc
Q 027763 3 EKKIHRAHVLIVPYPSQGHINPTFQFAKRLASKGL--KITLAITN 45 (219)
Q Consensus 3 ~~~~~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~--~VT~~t~~ 45 (219)
|++.+.++|.++-. |.+-- .++..|+.+|+ +|+++...
T Consensus 2 ~~~~~~mkI~IiGa---G~vG~--~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 2 ETTVKPTKLAVIGA---GAVGS--TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -----CCEEEEECC---SHHHH--HHHHHHHHTTCCSEEEEECSS
T ss_pred CcCCCCCEEEEECC---CHHHH--HHHHHHHhCCCCCEEEEEeCC
Confidence 44445678888864 54433 27788999999 99998664
No 156
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=27.46 E-value=43 Score=24.01 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=22.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|++.- +.|- --.+++++|+++|++|+.+.-.
T Consensus 5 ~ilVtG--atG~--iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFG--ATGQ--TGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEES--TTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCcH--HHHHHHHHHHHCCCeEEEEEeC
Confidence 565553 3343 3468899999999999988754
No 157
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=27.44 E-value=89 Score=20.54 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=24.1
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.. .++|+||.|. ++. +.++.+++ ++|.+++....
T Consensus 38 ~~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 38 QEAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 444554432 3589999998 643 33444332 57887776543
No 158
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.34 E-value=77 Score=21.36 Aligned_cols=42 Identities=12% Similarity=0.060 Sum_probs=24.5
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.+ .++|+||.|..++. +..+.+++ ++|.+++....
T Consensus 48 ~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 48 TQALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 344444433 35899999987653 44444432 57777665443
No 159
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=27.31 E-value=91 Score=26.44 Aligned_cols=38 Identities=16% Similarity=0.319 Sum_probs=32.7
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCccc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
-|+++-.+|.|=..-...||..|+.+|++|.++.....
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 46666778889999999999999999999999987654
No 160
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=27.30 E-value=1.3e+02 Score=19.78 Aligned_cols=41 Identities=15% Similarity=-0.070 Sum_probs=23.5
Q ss_pred HHHHHHhhcCCCCccEEEeCCCcc---cHHHHHH----HcCCCeeEEec
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLY---WALDVAK----GFGLFSAAFFT 137 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~---~~~~vA~----~lgiP~v~~~~ 137 (219)
.+.++.+.+. .++|+||.|..++ .+..+.+ .-++|.+++..
T Consensus 39 ~~a~~~l~~~-~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 39 EAAVEKVSGG-WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp HHHHHHHHTT-CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred HHHHHHHhcC-CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 4444444322 3689999998763 2344443 34677766643
No 161
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=27.28 E-value=90 Score=24.19 Aligned_cols=40 Identities=15% Similarity=0.256 Sum_probs=32.0
Q ss_pred CCceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++.+++++. -++.|=..-...||..|+++|.+|.++-...
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 345666555 4677999999999999999999999987653
No 162
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=27.22 E-value=76 Score=25.21 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=25.7
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
..+|.++-....| ..+|+.|+++||+|+++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 3578888665555 56889999999999988654
No 163
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=27.21 E-value=86 Score=24.01 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=24.4
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+++++.-.+.| --..+|++|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 367777755544 457899999999999887654
No 164
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=27.11 E-value=68 Score=26.45 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=22.5
Q ss_pred CceEEEEeCCCccCh-hHHHHHHHHHHhCCCcEEEEeCccc
Q 027763 8 RAHVLIVPYPSQGHI-NPTFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~-~P~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
+++++++ |-||+ .++.++++.| |++||++-+...
T Consensus 199 ~~~L~I~---GaGhva~aLa~la~~l---gf~V~v~D~R~~ 233 (362)
T 3on5_A 199 KERLIIF---GAGPDVPPLVTFASNV---GFYTVVTDWRPN 233 (362)
T ss_dssp CEEEEEE---CCSTTHHHHHHHHHHH---TEEEEEEESCGG
T ss_pred CCEEEEE---CCCHHHHHHHHHHHHC---CCeEEEECCCcc
Confidence 4566555 67888 4444454444 999999987643
No 165
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=26.94 E-value=49 Score=24.31 Aligned_cols=36 Identities=22% Similarity=0.516 Sum_probs=28.8
Q ss_pred ceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|+++| |.|= -.+..+|++.|.++|.+|.|...+-
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3688887 4442 3689999999999999999988764
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=26.88 E-value=81 Score=26.86 Aligned_cols=39 Identities=18% Similarity=0.023 Sum_probs=28.8
Q ss_pred CCceEEEEeCCCccC--hhHHHHHHHH--HHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGH--INPTFQFAKR--LASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH--~~P~l~La~~--L~~rG~~VT~~t~~ 45 (219)
++++|+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 204 ~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 204 GPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 456888887554444 3557889999 67789999999864
No 167
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.80 E-value=88 Score=20.60 Aligned_cols=32 Identities=9% Similarity=-0.040 Sum_probs=21.2
Q ss_pred CccEEEeCCCccc--HHHHHHHc----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l----giP~v~~~~~~ 139 (219)
++|+||.|..++. +..+.+++ .+|.+++....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 48 KYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 5899999987753 44555443 57877775543
No 168
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=26.73 E-value=65 Score=24.44 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=30.3
Q ss_pred CceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.+++.+. -+|.|=..-...||..|+++|.+|.++-...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34554443 4566888999999999999999999987654
No 169
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=26.71 E-value=42 Score=26.21 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=26.1
Q ss_pred ceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|+++.-+|- =- =-+..||.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEec
Confidence 47999885543 21 2378899999999999998654
No 170
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=26.69 E-value=1.1e+02 Score=22.05 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=30.9
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
-+.+.-+.+.|=..-+..|++.|..+|.+|.++....
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 4667777788999999999999999999998887543
No 171
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=26.64 E-value=91 Score=20.69 Aligned_cols=30 Identities=7% Similarity=0.114 Sum_probs=18.8
Q ss_pred CCccEEEeCCCccc--HHHHHHHc-----CCCeeEEe
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFF 136 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~ 136 (219)
.++|+||.|.-++. +.++.+++ ++|.+++.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 35899999987753 44554433 45665553
No 172
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=26.63 E-value=48 Score=25.82 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=23.9
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++|.++-....| ..+|+.|+++||+|+++...
T Consensus 4 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 478887654444 45789999999999998653
No 173
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=26.55 E-value=91 Score=23.31 Aligned_cols=38 Identities=11% Similarity=-0.049 Sum_probs=27.1
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++-|++++- ..|+..-+..+++.|+++|++|..+.-..
T Consensus 46 ~p~vv~~hG-~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 46 GRTILLMHG-KNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp SCEEEEECC-TTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEEcC-CCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 345666664 44555668899999999999987765543
No 174
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=26.33 E-value=84 Score=26.66 Aligned_cols=25 Identities=20% Similarity=0.175 Sum_probs=19.4
Q ss_pred CccEEEeCCCcccHHHHHHHcCCCeeEE
Q 027763 108 PIDCVVYDAFLYWALDVAKGFGLFSAAF 135 (219)
Q Consensus 108 ~~d~vI~D~~~~~~~~vA~~lgiP~v~~ 135 (219)
++|+||... +...+|+++|||.+.+
T Consensus 375 ~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 578888765 4678899999998854
No 175
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=26.31 E-value=1.2e+02 Score=22.27 Aligned_cols=35 Identities=11% Similarity=0.007 Sum_probs=24.1
Q ss_pred eEEEEeCCCccC--hhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGH--INPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH--~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
-|+++. +..|+ ..-+..+++.|+++|+.|..+.-.
T Consensus 48 ~vv~~H-G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 48 MAIIFH-GFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEC-CTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEEc-CCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 344444 44444 566889999999999988766443
No 176
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=26.19 E-value=90 Score=19.64 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=21.2
Q ss_pred CccEEEeCCCccc--HHHHHH----HcCCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAK----GFGLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~----~lgiP~v~~~~~~ 139 (219)
++|+||.|..++. +..+.+ .-++|.+++....
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 5799999987653 444443 3468887776544
No 177
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=25.84 E-value=80 Score=20.65 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=20.7
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 5799999987753 44444433 47777765543
No 178
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.83 E-value=1.1e+02 Score=19.67 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=23.3
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc------CCCeeEEech
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF------GLFSAAFFTQ 138 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l------giP~v~~~~~ 138 (219)
.+.++.+.+ .++|+||.|..++. +..+.+++ ..|.+++.+.
T Consensus 40 ~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 40 FDAGIKLST--FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHHH--TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 344444432 35899999987754 44555433 3455555554
No 179
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=25.78 E-value=1.4e+02 Score=19.94 Aligned_cols=32 Identities=13% Similarity=0.026 Sum_probs=21.1
Q ss_pred CccEEEeCCCccc--HHHHHHHc-------CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 5899999987753 44444432 57777776544
No 180
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=25.76 E-value=1.3e+02 Score=23.46 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=23.5
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+++++.-.+ |-----..+|++|+++|++|.++.-.
T Consensus 31 k~vlVTGas-g~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGVA-NDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECCC-STTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeCC-CCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 566666443 21113468999999999999876543
No 181
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=25.76 E-value=1.1e+02 Score=23.86 Aligned_cols=44 Identities=18% Similarity=0.165 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHcCCCeeEEechh
Q 027763 94 TLAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGFGLFSAAFFTQT 139 (219)
Q Consensus 94 ~l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~~~~~~ 139 (219)
.+.++++.+.+ .++.||+++....- +..+|++.|++.+.+-+.+
T Consensus 211 ~l~~l~~~ik~--~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld~l~ 256 (284)
T 2prs_A 211 RLHEIRTQLVE--QKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLG 256 (284)
T ss_dssp HHHHHHHHHHH--TTCCEEEECTTSCSHHHHHHTTTSCCEEEECCTTC
T ss_pred HHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHcCCeEEEeccCc
Confidence 45555555543 35678888876543 5678888888877664443
No 182
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.75 E-value=1.2e+02 Score=19.41 Aligned_cols=42 Identities=26% Similarity=0.154 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc---HHHHHHHc-----CCCeeEEech
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW---ALDVAKGF-----GLFSAAFFTQ 138 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~---~~~vA~~l-----giP~v~~~~~ 138 (219)
.+.++.+.+. .++|+||.|..++. +..+.+++ ++|.+++...
T Consensus 39 ~~a~~~l~~~-~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 39 AKAIEMLKSG-AAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHTT-CCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHcC-CCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3444444321 25899999986642 34444432 5777776543
No 183
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=25.45 E-value=76 Score=24.23 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=27.1
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+++++. .|.| +.|++.+.+.|.++|.+|+++-...
T Consensus 111 ~~~llia-gGtG-itP~~s~l~~l~~~~~~v~l~~~~r 146 (262)
T 1ep3_B 111 DKILIIG-GGIG-VPPLYELAKQLEKTGCQMTILLGFA 146 (262)
T ss_dssp SEEEEEE-EGGG-SHHHHHHHHHHHHHTCEEEEEEEES
T ss_pred CeEEEEE-CcCc-HHHHHHHHHHHHHcCCeEEEEEEcC
Confidence 4566665 3445 8999999999998888888876543
No 184
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=25.44 E-value=81 Score=24.06 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=23.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+++++.-.+.| --..++++|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 46666644432 457899999999999988764
No 185
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=25.44 E-value=91 Score=21.23 Aligned_cols=37 Identities=14% Similarity=0.021 Sum_probs=23.4
Q ss_pred CCceEEEEeCCCccCh-hHHHHHHHHHHhCCCcEEEEe
Q 027763 7 HRAHVLIVPYPSQGHI-NPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~-~P~l~La~~L~~rG~~VT~~t 43 (219)
+++.|+++.-.+.+.. .-+..+++.|+++|+.|..+.
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 3455777764443222 245689999999998765543
No 186
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=25.39 E-value=1.1e+02 Score=23.31 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=24.5
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
.+++++.-.+.| --..+|++|+++|++|.++.
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEe
Confidence 357777755554 35789999999999998864
No 187
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=25.39 E-value=88 Score=24.39 Aligned_cols=39 Identities=8% Similarity=0.026 Sum_probs=30.7
Q ss_pred Cce-EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAH-VLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~h-vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.+ |+|..-+|.|=..-...||..|+++|.+|-++-...
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 344 445556666888999999999999999999986653
No 188
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=25.37 E-value=89 Score=20.26 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=22.6
Q ss_pred cChhHHHHHHHHHHhC-CC-cEEEEeCcccc
Q 027763 20 GHINPTFQFAKRLASK-GL-KITLAITNFIY 48 (219)
Q Consensus 20 GH~~P~l~La~~L~~r-G~-~VT~~t~~~~~ 48 (219)
......+.+|..+++. |+ +|+++-...-.
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 4456679999999998 99 99987776544
No 189
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=25.30 E-value=1.2e+02 Score=21.41 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=23.8
Q ss_pred CceEEEEeC----CCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 8 RAHVLIVPY----PSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 8 ~~hvvv~p~----p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
++-|+++.- .+.+.-.-+..+++.|+++|+.|..+.-
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNF 77 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEec
Confidence 344555552 1333444578899999999998776553
No 190
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=25.11 E-value=1.3e+02 Score=20.32 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=25.1
Q ss_pred EEeCCCccC--hhHHHHHHHHHHhCCCcE-EEEeCcccc
Q 027763 13 IVPYPSQGH--INPTFQFAKRLASKGLKI-TLAITNFIY 48 (219)
Q Consensus 13 v~p~p~~GH--~~P~l~La~~L~~rG~~V-T~~t~~~~~ 48 (219)
++..+-.|+ ....+.+|..+.+.||+| +++-...-.
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 344444443 467789999999999999 877665433
No 191
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=25.10 E-value=1e+02 Score=19.80 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=23.6
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-------CCCeeEEech
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQ 138 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~ 138 (219)
++.++.+.. .++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 41 ~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 41 EQGMKIMAQ--NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHHT--SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHHc--CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 344444432 35899999987753 55555544 3555555443
No 192
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.07 E-value=1.1e+02 Score=22.51 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=22.9
Q ss_pred CceEEEEeCCCccCh----hHHHHHHHHHHhCCCcEEEEeC
Q 027763 8 RAHVLIVPYPSQGHI----NPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~----~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+..|.|+.... +.- .-..+|++.|+++|+.| ++.
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~l--v~G 50 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTL--VWG 50 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEE--EEC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEE--EEC
Confidence 46788888655 443 34567778888899764 444
No 193
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.93 E-value=62 Score=24.68 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=22.3
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEE
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLA 42 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~ 42 (219)
||++ ....|+-.-+..+++.|+++|++|..+
T Consensus 54 Vlll-HG~~~s~~~~~~la~~La~~Gy~Via~ 84 (281)
T 4fbl_A 54 VLVS-HGFTGSPQSMRFLAEGFARAGYTVATP 84 (281)
T ss_dssp EEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEC
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4443 444567666888999999999887654
No 194
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=24.85 E-value=70 Score=25.27 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=24.8
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++|.++-..+.|- .+|..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 3688886666663 46889999999999987654
No 195
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=24.74 E-value=1.2e+02 Score=19.25 Aligned_cols=32 Identities=19% Similarity=0.078 Sum_probs=20.8
Q ss_pred CccEEEeCCCccc--HHHHHHH----cCCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKG----FGLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~----lgiP~v~~~~~~ 139 (219)
++|+||.|..++. +..+.++ -++|.+++....
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 47 DINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 5899999987653 4444443 367777765543
No 196
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=24.58 E-value=1.1e+02 Score=19.93 Aligned_cols=32 Identities=6% Similarity=-0.021 Sum_probs=20.3
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 47 FFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 5899999987753 44444332 57777665543
No 197
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=24.57 E-value=64 Score=24.77 Aligned_cols=31 Identities=10% Similarity=0.162 Sum_probs=22.1
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|.++-....| ..+|+.|+++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 46666543334 36789999999999998654
No 198
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=24.56 E-value=47 Score=26.64 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=26.2
Q ss_pred ceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|++++-+|- =- =-+..||.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEec
Confidence 47999885543 21 2378899999999999998654
No 199
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.50 E-value=46 Score=24.42 Aligned_cols=21 Identities=14% Similarity=0.165 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCCcEEEEeCcc
Q 027763 26 FQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~t~~~ 46 (219)
..++++|+++|++|+.+.-..
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESSG
T ss_pred HHHHHHHHHCCCEEEEEECCc
Confidence 688999999999999887543
No 200
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=24.47 E-value=52 Score=27.54 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=26.1
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+.||+++-+.-.| ..+++.|.++|++|+++-...
T Consensus 3 ~~~~viIiG~Gr~G-----~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFG-----QITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEECCH
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35688888653333 567899999999999998754
No 201
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=24.47 E-value=71 Score=21.75 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEech
Q 027763 95 LAELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQ 138 (219)
Q Consensus 95 l~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~ 138 (219)
.++.++.+.+...++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 70 ~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 70 GEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 34444444322125899999987643 44444433 5787766554
No 202
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=24.44 E-value=55 Score=26.02 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+.+|.++-..+.| ..+|..|++.||+|+++..
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIAR 50 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEc
Confidence 35678888666555 4578899999999999933
No 203
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.38 E-value=54 Score=23.36 Aligned_cols=34 Identities=24% Similarity=0.132 Sum_probs=24.3
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhC-CCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASK-GLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~ 46 (219)
..||+++-+ |.+ -..+++.|.++ |++|+++....
T Consensus 39 ~~~v~IiG~---G~~--G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGM---GRI--GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECC---SHH--HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECC---CHH--HHHHHHHHHhccCCeEEEEECCH
Confidence 357888843 432 35678899998 99999987643
No 204
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.34 E-value=1.2e+02 Score=20.28 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=24.0
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-----cCCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-----FGLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 139 (219)
.+.++.+.+. .++|+||.|..++. +.++.++ -++|.+++....
T Consensus 37 ~~a~~~l~~~-~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 86 (151)
T 3kcn_A 37 PEALACIKKS-DPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQ 86 (151)
T ss_dssp HHHHHHHHHS-CCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGG
T ss_pred HHHHHHHHcC-CCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCC
Confidence 3444444322 35799999987643 4444433 256766665543
No 205
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=24.30 E-value=60 Score=27.38 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=24.6
Q ss_pred EEEeCCC---ccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 12 LIVPYPS---QGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 12 vv~p~p~---~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+=|..- -||+.|++.+ +.|.+.||++.++....
T Consensus 36 G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd~ 72 (419)
T 2ts1_A 36 GFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGGA 72 (419)
T ss_dssp EECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred eeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 3445533 3999987665 58888999999887653
No 206
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=23.96 E-value=28 Score=27.44 Aligned_cols=31 Identities=23% Similarity=0.020 Sum_probs=22.6
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+|+++-...-| +..|..|+++|++|+++-.
T Consensus 9 ~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 467777543323 6678889999999999865
No 207
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=23.95 E-value=73 Score=25.00 Aligned_cols=23 Identities=13% Similarity=0.303 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 22 INPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 22 ~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.|+-.|++.+..-..+|+ ++++
T Consensus 17 ~~pl~~~v~~I~Gd~v~V~-l~~~ 39 (284)
T 3cx3_A 17 FYPIYAMVKEVSGDLNDVR-MIQS 39 (284)
T ss_dssp SHHHHHHHHHHHTTSSEEE-ECCC
T ss_pred cHHHHHHHHHHcCCceEEE-EcCC
Confidence 5678888888887667888 6654
No 208
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=23.82 E-value=82 Score=20.13 Aligned_cols=32 Identities=13% Similarity=0.081 Sum_probs=20.7
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 5799999987653 44444433 57777775543
No 209
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=23.74 E-value=89 Score=23.72 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=29.8
Q ss_pred CCceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++.+++.+. -+|.|=..-...||..|+ +|.+|.++-...
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 445666553 456688899999999999 999999986653
No 210
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=23.72 E-value=53 Score=24.47 Aligned_cols=20 Identities=15% Similarity=0.017 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCcEEEEeC
Q 027763 25 TFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~ 44 (219)
-.+++++|+++|++|+++.-
T Consensus 14 G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 14 GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHhCCCEEEEEeC
Confidence 46789999999999998764
No 211
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=23.69 E-value=52 Score=25.86 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=26.0
Q ss_pred ceEEEEeCCCccChh-HHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHIN-PTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~-P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|+++.-+|- =- =-+..||.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGN--NGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 47888886543 21 1378899999999999997653
No 212
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=23.67 E-value=82 Score=24.85 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=22.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+|.++-....| ..+|+.|+++||+|++...
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 58887766666 3689999999999998753
No 213
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=23.61 E-value=1.6e+02 Score=19.60 Aligned_cols=33 Identities=18% Similarity=-0.012 Sum_probs=21.6
Q ss_pred CCccEEEeCCCccc--HHHHHHH-------cCCCeeEEechh
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFTQT 139 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~~~ 139 (219)
.++|+||.|..++. +.++.++ .++|.+++....
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 99 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTD 99 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 46899999987753 4444432 357777776544
No 214
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=23.61 E-value=44 Score=26.27 Aligned_cols=41 Identities=7% Similarity=-0.091 Sum_probs=34.7
Q ss_pred CCceEEEEeCCCccChhHHHHHHHH--------HHhC-CCcEEEEeCccc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKR--------LASK-GLKITLAITNFI 47 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~--------L~~r-G~~VT~~t~~~~ 47 (219)
++.+|++...++-.|-+...-++.. |.++ |++|..+...-.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp 168 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVA 168 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBC
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCC
Confidence 4568999999999999999988877 9998 999998876543
No 215
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=23.52 E-value=49 Score=27.63 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=24.7
Q ss_pred EEEeCCC---ccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 12 LIVPYPS---QGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 12 vv~p~p~---~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+=|..- -||+.|++.+. .|.+.||++.++....
T Consensus 70 G~dPTg~sLHlGhlv~l~~l~-~lQ~~G~~~~~lIgD~ 106 (392)
T 1y42_X 70 GIDPTAPSLHVGHLLPLMPLF-WMYLEGYKAFTLIGGS 106 (392)
T ss_dssp EECCCSSSCBGGGHHHHHHHH-HHHHHTCEEEEEECTT
T ss_pred eecCCCCCccHHHHHHHHHHH-HHHHcCCcEEEEEcCc
Confidence 3445433 39999877765 7788899999887764
No 216
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.45 E-value=55 Score=24.26 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCcEEEEeCc
Q 027763 25 TFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~~ 45 (219)
-..++++|+++|++|+++.-.
T Consensus 18 G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 18 GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 478999999999999887643
No 217
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=23.38 E-value=1e+02 Score=23.28 Aligned_cols=41 Identities=15% Similarity=0.023 Sum_probs=26.5
Q ss_pred HHHHHHHhhcC-CCCccEEEeCCCcccHHHHHHHcCCCeeEEe
Q 027763 95 LAELITKYKSS-SNPIDCVVYDAFLYWALDVAKGFGLFSAAFF 136 (219)
Q Consensus 95 l~~~l~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 136 (219)
++++++++... .-.+.+||++.- --+...|+++|||.+.+.
T Consensus 26 l~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 26 LRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp HHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 44555544211 113678888874 235688999999999884
No 218
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=23.29 E-value=97 Score=22.15 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=20.8
Q ss_pred CCccEEEeCCCccc--HHHHHHHc-----CCCeeEEech
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQ 138 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~ 138 (219)
.+||+||.|..++. +.++.+++ ++|.+++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 35899999987753 44444433 5787777553
No 219
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.25 E-value=67 Score=25.47 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=24.7
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|.++-...+|. .+|+.|+++||+|++..-.
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 577777766664 6799999999999998653
No 220
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.12 E-value=89 Score=19.85 Aligned_cols=30 Identities=23% Similarity=0.142 Sum_probs=18.9
Q ss_pred CccEEEeCCCccc--HHHHHHHc-------CCCeeEEec
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFT 137 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~ 137 (219)
++|+||.|..++. +.++.+++ ++|.+++..
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 5799999987753 44444432 467766644
No 221
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=23.11 E-value=1.2e+02 Score=22.04 Aligned_cols=37 Identities=16% Similarity=0.028 Sum_probs=25.9
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++-|++++ +..|+..-+..+++.|+++|++|..+.-.
T Consensus 26 ~~~vv~~h-G~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 26 HPVVLCIH-GILEQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp SCEEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEC-CCCcccchHHHHHHHhhhcCeEEEEECCC
Confidence 34566666 34455556788999999999998776544
No 222
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=23.10 E-value=1.7e+02 Score=19.47 Aligned_cols=42 Identities=19% Similarity=0.141 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-----cCCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-----FGLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 139 (219)
.+.++.+.. .++|+||.|..++. +..+.++ -++|.+++....
T Consensus 41 ~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 41 GEAYRLYRE--TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHHT--TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 344444432 35899999987642 3444433 257887776543
No 223
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=23.09 E-value=1.5e+02 Score=18.62 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=20.5
Q ss_pred CccEEEeCCCccc--HHHHHHH-----cCCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKG-----FGLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~-----lgiP~v~~~~~~ 139 (219)
++|+||.|..++. +..+.++ -++|.+++....
T Consensus 44 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 44 IPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 5899999987753 4444433 257777775543
No 224
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=23.09 E-value=1.2e+02 Score=19.22 Aligned_cols=32 Identities=13% Similarity=0.093 Sum_probs=20.7
Q ss_pred CccEEEeCCCccc--HHHHHHHc----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l----giP~v~~~~~~ 139 (219)
++|+||.|.-++. +..+.+++ ++|.+++....
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 5899999987653 44555543 57776665543
No 225
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=23.03 E-value=1.4e+02 Score=18.98 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=24.3
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-------CCCeeEEech
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-------GLFSAAFFTQ 138 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~~~~~ 138 (219)
.+.++.+.. .++|+||.|..++. +..+.+++ .+|.+++...
T Consensus 39 ~~a~~~~~~--~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 39 VDALNKLQA--GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHHTT--CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 344444432 35899999987753 45555443 4566666543
No 226
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=22.88 E-value=66 Score=24.68 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=27.1
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+++|.++-....|- .||+.|.++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457899888777764 4789999999999987764
No 227
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=22.84 E-value=1.4e+02 Score=22.22 Aligned_cols=33 Identities=9% Similarity=0.125 Sum_probs=22.5
Q ss_pred CceEEEEeCCCccC----hhHHHHHHHHHHhCCCcEEE
Q 027763 8 RAHVLIVPYPSQGH----INPTFQFAKRLASKGLKITL 41 (219)
Q Consensus 8 ~~hvvv~p~p~~GH----~~P~l~La~~L~~rG~~VT~ 41 (219)
++.|.|+.... +. ..-..+|++.|+++|+.|..
T Consensus 22 ~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~ 58 (199)
T 3qua_A 22 QWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVS 58 (199)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 45788887554 33 34557888888999976533
No 228
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=22.75 E-value=87 Score=24.70 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=24.5
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
..+|.++-....| ..+|+.|+++||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4578887544434 56789999999999988654
No 229
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=22.71 E-value=76 Score=23.42 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=23.3
Q ss_pred CceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 8 RAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
..+|.++-....| ..+|+.|+++|++|+++...
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 4567777544334 56789999999999987543
No 230
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.71 E-value=1e+02 Score=19.69 Aligned_cols=40 Identities=18% Similarity=0.020 Sum_probs=22.9
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH-------cCCCeeEEec
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG-------FGLFSAAFFT 137 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~-------lgiP~v~~~~ 137 (219)
++.++.+.+ .++|+||.|..++. +.++.++ -++|.+++..
T Consensus 37 ~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 37 TDALHAMST--RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp HHHHHHHHH--SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 444444433 35899999987643 4444432 3466666644
No 231
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=22.63 E-value=54 Score=22.55 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=13.0
Q ss_pred HHHHHHHHhCCCcEEEE
Q 027763 26 FQFAKRLASKGLKITLA 42 (219)
Q Consensus 26 l~La~~L~~rG~~VT~~ 42 (219)
..||++|...|.+|++=
T Consensus 78 ~~Lc~RL~~AG~~V~lk 94 (139)
T 3noh_A 78 DSLCERLNDAGADVQIK 94 (139)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhcCCCceec
Confidence 35677777789999974
No 232
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=22.62 E-value=1.6e+02 Score=22.56 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=27.4
Q ss_pred CceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 8 RAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 8 ~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
+++.+++. -.+.|=..-.+.|++.|.++|.+|.++=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 34444444 3355888999999999999999999874
No 233
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=22.55 E-value=1.2e+02 Score=23.78 Aligned_cols=38 Identities=8% Similarity=-0.012 Sum_probs=27.8
Q ss_pred CceEEEEeCCCccC-----hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGH-----INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH-----~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.+|+++- .|.+. +..-..++++|.+.||+|..+.+..
T Consensus 13 ~~~v~vl~-gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLF-GGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEEC-CCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEE-CCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35677665 34443 4567899999999999999988543
No 234
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=22.29 E-value=1.5e+02 Score=19.20 Aligned_cols=32 Identities=13% Similarity=-0.057 Sum_probs=20.1
Q ss_pred CCccEEEeCCCccc--HHHHHHHc------CCCeeEEech
Q 027763 107 NPIDCVVYDAFLYW--ALDVAKGF------GLFSAAFFTQ 138 (219)
Q Consensus 107 ~~~d~vI~D~~~~~--~~~vA~~l------giP~v~~~~~ 138 (219)
.++|+||.|..++. +.++.+++ .+|.++++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 35899999988753 44444322 4676666544
No 235
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.15 E-value=55 Score=23.98 Aligned_cols=34 Identities=9% Similarity=0.335 Sum_probs=24.1
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|++.- +.|.+ -..|+++|+++|++|+.+.-..
T Consensus 5 ~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEcCc
Confidence 3566554 44544 3588999999999999887653
No 236
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=22.05 E-value=61 Score=24.12 Aligned_cols=21 Identities=19% Similarity=0.189 Sum_probs=17.3
Q ss_pred HHHHHHHHHhCCCcEEEEeCc
Q 027763 25 TFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~~ 45 (219)
-.+++++|+++|++|+++.-.
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 20 GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 467899999999999887643
No 237
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.99 E-value=1.1e+02 Score=22.33 Aligned_cols=33 Identities=6% Similarity=0.053 Sum_probs=27.0
Q ss_pred EEEEe-CCCccChhHHHHHHHHHHhCCCcEEEEe
Q 027763 11 VLIVP-YPSQGHINPTFQFAKRLASKGLKITLAI 43 (219)
Q Consensus 11 vvv~p-~p~~GH~~P~l~La~~L~~rG~~VT~~t 43 (219)
|.+.. -+|.|=..-...||..|+++|++|-++-
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 44444 3677999999999999999999999863
No 238
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=21.98 E-value=1.1e+02 Score=23.22 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=29.0
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
|.+..-+|.|=..-...||..|+++|++|.++-..
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 44555667788899999999999999999997654
No 239
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.92 E-value=1.2e+02 Score=22.81 Aligned_cols=42 Identities=17% Similarity=0.039 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHH----cCCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKG----FGLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~----lgiP~v~~~~~~ 139 (219)
.+.++.+.. .+||+||.|..++. +.++.++ -++|.+++....
T Consensus 71 ~~al~~~~~--~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 71 MNGLIKARE--DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHHH--SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 344444433 35899999998764 3455544 358887776654
No 240
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=21.82 E-value=1e+02 Score=25.04 Aligned_cols=39 Identities=18% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
++.+++.+. -+|-|=..-...||..|+++|.+|-++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345655444 567799999999999999999999999866
No 241
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=21.81 E-value=67 Score=25.19 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=24.5
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|.|+-....|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4688886655565 5788999999999988764
No 242
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.70 E-value=62 Score=24.09 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=22.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.+++. .+.| .--.+++++|+++|++|+++.-.
T Consensus 8 ~~vlVt-Gasg--giG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 8 KVSLVT-GSTR--GIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CEEEET-TCSS--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-CCCc--hHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555 3333 23467899999999999887643
No 243
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=21.68 E-value=56 Score=25.10 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=19.9
Q ss_pred CCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 17 PSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 17 p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+.|-+ -.+|+++|+++|++|+.+.-
T Consensus 19 GatG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 19 GANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp STTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred CCCChH--HHHHHHHHHhCCCeEEeccC
Confidence 455644 46789999999999998754
No 244
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=21.62 E-value=1.3e+02 Score=22.03 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=23.5
Q ss_pred eEE-EEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVL-IVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvv-v~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|+ ++..+...+-.....+++.+.++|++|.++...
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 444 444444445666778888888888888776543
No 245
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=21.62 E-value=1.5e+02 Score=22.37 Aligned_cols=35 Identities=6% Similarity=0.220 Sum_probs=23.3
Q ss_pred ceEEEEeCCCcc----ChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQG----HINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~G----H~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
..|.|+.....+ +..-..+|++.|+++|+.| ++..
T Consensus 10 ~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~l--V~GG 48 (216)
T 1ydh_A 10 RKICVFCGSHSGHREVFSDAAIELGNELVKRKIDL--VYGG 48 (216)
T ss_dssp SEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred CeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEE--EECC
Confidence 358888655544 3356678888888999765 5553
No 246
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=21.61 E-value=61 Score=22.80 Aligned_cols=22 Identities=27% Similarity=0.156 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCcEEEEeCcc
Q 027763 25 TFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~~~ 46 (219)
-+.+|..|+++|.+||++....
T Consensus 13 Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 13 GLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEECSC
T ss_pred HHHHHHHHHHCCCcEEEEeCCC
Confidence 4788999999999999997654
No 247
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=21.58 E-value=1.1e+02 Score=22.58 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=30.7
Q ss_pred CceEEEEe--CCCccChhHHHHHHHHHHhC-CCcEEEEeCcc
Q 027763 8 RAHVLIVP--YPSQGHINPTFQFAKRLASK-GLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p--~p~~GH~~P~l~La~~L~~r-G~~VT~~t~~~ 46 (219)
+.+++.+. -+|.|=..-...||..|+++ |.+|-++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 34544443 46778999999999999998 99999987764
No 248
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=21.56 E-value=1.5e+02 Score=22.70 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=24.1
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
.+++++.-.+.| --..+|++|+++|++|.++..
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 356777755442 346899999999999988763
No 249
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.49 E-value=69 Score=25.40 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=24.6
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
++|.++-..+.| ..+|..|++.||+|+++.-..
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh
Confidence 467777655555 356889999999999987654
No 250
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=21.46 E-value=1.2e+02 Score=23.64 Aligned_cols=32 Identities=13% Similarity=-0.062 Sum_probs=21.6
Q ss_pred CCccEEEeCCCcc-c--H----HHHHHHcCCCeeEEech
Q 027763 107 NPIDCVVYDAFLY-W--A----LDVAKGFGLFSAAFFTQ 138 (219)
Q Consensus 107 ~~~d~vI~D~~~~-~--~----~~vA~~lgiP~v~~~~~ 138 (219)
.+||+||.|..++ . + ..+-+..++|.+.++..
T Consensus 204 ~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 204 RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 3589999999887 2 2 23333338998877653
No 251
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.46 E-value=51 Score=25.20 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=23.9
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+|++.- + |.+ -.+|+++|.++||+|+.++-..
T Consensus 6 ~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GYT--ARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CHH--HHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cHH--HHHHHHHHHHCCCEEEEEEcCh
Confidence 4666664 4 544 3578999999999999887543
No 252
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=21.40 E-value=99 Score=24.56 Aligned_cols=42 Identities=24% Similarity=0.165 Sum_probs=29.5
Q ss_pred HHHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEe
Q 027763 93 KTLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFF 136 (219)
Q Consensus 93 ~~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 136 (219)
..+++++.+..... -.+.+||+|-- .+..+|+++|||.+.+-
T Consensus 107 ~~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 107 HCLADLLFRWKMGELKMDIVGIVSNHP--DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp HHHHHHHHHHHHTSSCCEEEEEEESSS--TTHHHHHHTTCCEEECC
T ss_pred cCHHHHHHHHHcCCCCcEEEEEEeCcH--HHHHHHHHcCCCEEEeC
Confidence 46778887764321 23678888763 35678999999998764
No 253
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=21.36 E-value=58 Score=27.44 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=25.1
Q ss_pred EEEEeCCC---ccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 11 VLIVPYPS---QGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 11 vvv~p~p~---~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
..+=|..- -||+.|++.+ ++|.+.||++.++....
T Consensus 37 ~G~dPTg~sLHlGh~v~l~~~-~~lQ~~G~~~~~lIgd~ 74 (420)
T 1jil_A 37 CGADPTADSLHIGHLLPFLTL-RRFQEHGHRPIVLIGGG 74 (420)
T ss_dssp EEECCSSSSCBHHHHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred EeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 33455533 2999987665 58888999999887654
No 254
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.34 E-value=1.2e+02 Score=19.81 Aligned_cols=31 Identities=6% Similarity=-0.006 Sum_probs=19.8
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEech
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQ 138 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~ 138 (219)
++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 44 ~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (139)
T 2jk1_A 44 WVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGY 81 (139)
T ss_dssp CEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCC
Confidence 5899999987753 44444432 4676666543
No 255
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=21.30 E-value=55 Score=22.31 Aligned_cols=32 Identities=16% Similarity=0.073 Sum_probs=24.2
Q ss_pred cChhHHHHHHHHHHhCCCcEEEEeCccccccc
Q 027763 20 GHINPTFQFAKRLASKGLKITLAITNFIYKTK 51 (219)
Q Consensus 20 GH~~P~l~La~~L~~rG~~VT~~t~~~~~~~~ 51 (219)
||++=+-.|-+.|.++|.+.-+++.+.|...+
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~Yl 32 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYL 32 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceee
Confidence 78887778888999999999999988776544
No 256
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=21.24 E-value=1.9e+02 Score=20.07 Aligned_cols=38 Identities=18% Similarity=0.029 Sum_probs=26.1
Q ss_pred CceEEEEeCCCccChhHHHH--HHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVPYPSQGHINPTFQ--FAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p~p~~GH~~P~l~--La~~L~~rG~~VT~~t~~~ 46 (219)
++.|+++. ...|+..-+.. +++.|+++|+.|..+....
T Consensus 32 ~~~vv~~h-G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 71 (210)
T 1imj_A 32 RFSVLLLH-GIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71 (210)
T ss_dssp SCEEEECC-CTTCCHHHHHHHTHHHHHHHTTCEEEEECCTT
T ss_pred CceEEEEC-CCCCccceeecchhHHHHHHCCCeEEEecCCC
Confidence 34455554 44567677777 6999999999887765543
No 257
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=21.20 E-value=64 Score=24.26 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=22.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.+++.-.+ |- --..++++|+++|++|.++.-.
T Consensus 14 k~vlItGas-gg--iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QN--IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 345555332 22 3478999999999999887643
No 258
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=21.20 E-value=1.1e+02 Score=24.19 Aligned_cols=42 Identities=14% Similarity=0.024 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhcCC--CCccEEEeCCCcccHHHHHHHcCCCeeEEe
Q 027763 93 KTLAELITKYKSSS--NPIDCVVYDAFLYWALDVAKGFGLFSAAFF 136 (219)
Q Consensus 93 ~~l~~~l~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 136 (219)
..+++++.+..... -.+.+||+|-- .+..+|+++|||.+.+-
T Consensus 102 ~~l~~ll~~~~~g~l~~~i~~Visn~~--~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 102 HCLNDLLYRQRIGQLGMDVVAVVSNHP--DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEEESSS--TTHHHHHHTTCCEEECC
T ss_pred CCHHHHHHHHHCCCCCcEEEEEEeCcH--HHHHHHHHcCCCEEEeC
Confidence 46788888765321 23678888863 35678999999998764
No 259
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=21.16 E-value=1.3e+02 Score=24.28 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=34.2
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+...|+++-.|+.|=..-+..|+..|+.+|++|.++....
T Consensus 78 ~~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp 117 (355)
T 3p32_A 78 NAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDP 117 (355)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC-
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecCC
Confidence 3456888889999999999999999999999999987764
No 260
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.11 E-value=88 Score=20.38 Aligned_cols=28 Identities=11% Similarity=0.180 Sum_probs=22.7
Q ss_pred cChhHHHHHHHHHHhCCCcEEEEeCccc
Q 027763 20 GHINPTFQFAKRLASKGLKITLAITNFI 47 (219)
Q Consensus 20 GH~~P~l~La~~L~~rG~~VT~~t~~~~ 47 (219)
-.-|-+-++.++..+||++|.-+|++..
T Consensus 85 qdqnrleefsrevrrrgfevrtvtspdd 112 (134)
T 2l69_A 85 QDQNRLEEFSREVRRRGFEVRTVTSPDD 112 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEESSHHH
T ss_pred CchhHHHHHHHHHHhcCceEEEecChHH
Confidence 3567788899999999999988887653
No 261
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.09 E-value=1.1e+02 Score=20.18 Aligned_cols=32 Identities=13% Similarity=-0.119 Sum_probs=20.2
Q ss_pred CccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 108 PIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
++|+||.|..++. +.++.+++ ++|.+++....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 4799999987753 44444433 46666665443
No 262
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.00 E-value=61 Score=25.48 Aligned_cols=34 Identities=32% Similarity=0.172 Sum_probs=25.0
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+.+|.++-....| ..+|+.|+++||+|+++...
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 34678888554444 36789999999999998654
No 263
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.89 E-value=65 Score=24.54 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=22.1
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+++++.-.+ | .--..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGA-R--GMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-C--HHHHHHHHHHHHCCCEEEEEeC
Confidence 455565333 3 2346789999999999988754
No 264
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=20.85 E-value=61 Score=24.85 Aligned_cols=31 Identities=26% Similarity=0.459 Sum_probs=23.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+|+|.- + | .--.+|+++|.++||+|+.+.-.
T Consensus 5 ~ilVtG--a-G--~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 5 KILIAG--C-G--DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CEEEEC--C-S--HHHHHHHHHHHHTTCCEEEEECT
T ss_pred cEEEEC--C-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 577663 4 6 34568899999999999988654
No 265
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.82 E-value=1.6e+02 Score=20.34 Aligned_cols=36 Identities=25% Similarity=0.450 Sum_probs=25.1
Q ss_pred EEEEeCCCccChhH--HHHHHHHHHhCCCcE-EEEeCcc
Q 027763 11 VLIVPYPSQGHINP--TFQFAKRLASKGLKI-TLAITNF 46 (219)
Q Consensus 11 vvv~p~p~~GH~~P--~l~La~~L~~rG~~V-T~~t~~~ 46 (219)
++++..+-.|+-.. -+.+|+.+.+.||+| +++-...
T Consensus 16 ~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 16 AIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp EEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 44555555666544 578899999999999 7665544
No 266
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.77 E-value=1.2e+02 Score=23.30 Aligned_cols=34 Identities=24% Similarity=0.439 Sum_probs=24.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+++++.-.+.| --.++|++|+++|++|.++.-.
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 457777755443 3468999999999998887643
No 267
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=20.75 E-value=66 Score=24.37 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=22.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+++++.-.+ | .--..++++|+++|++|+++.-
T Consensus 15 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTAST-D--GIGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCS-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-c--HHHHHHHHHHHHCCCEEEEEeC
Confidence 566666333 3 2356899999999999988754
No 268
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=20.75 E-value=67 Score=24.09 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=24.0
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+.+++.-.+.| --.++|++|+++|++|.++.-.
T Consensus 14 ~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 14 GKTSLITGASSG---IGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 456666644432 3578999999999999887653
No 269
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.71 E-value=76 Score=25.27 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=23.9
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|.++-....| ..+|+.|+++||+|+++...
T Consensus 5 mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 578888654444 34788899999999988653
No 270
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=20.67 E-value=72 Score=26.39 Aligned_cols=25 Identities=12% Similarity=0.384 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 22 INPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 22 ~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.-+|.+|.+.|.++|++|.+++...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 4679999999999999999998764
No 271
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=20.67 E-value=67 Score=24.04 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=22.1
Q ss_pred EEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 11 VLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 11 vvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+++. .+.|-+ -..++++|+++|++|.++.-.
T Consensus 9 ~vlVT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 9 RVLIT-GSSQGI--GLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp EEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEe-CCCChH--HHHHHHHHHHCCCEEEEECCC
Confidence 44554 333433 467899999999999887643
No 272
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.61 E-value=99 Score=20.48 Aligned_cols=16 Identities=19% Similarity=0.256 Sum_probs=11.2
Q ss_pred HHHHHHhCCCcEEEEe
Q 027763 28 FAKRLASKGLKITLAI 43 (219)
Q Consensus 28 La~~L~~rG~~VT~~t 43 (219)
.....++.|.+|.+++
T Consensus 71 ~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 71 QVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHCCCeEEEEe
Confidence 3334456799999988
No 273
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=20.53 E-value=70 Score=23.38 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=17.5
Q ss_pred HHHHHHHHH-hCCCcEEEEeCc
Q 027763 25 TFQFAKRLA-SKGLKITLAITN 45 (219)
Q Consensus 25 ~l~La~~L~-~rG~~VT~~t~~ 45 (219)
-..++++|+ ++|++|+.+.-.
T Consensus 18 G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 18 AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHHhcCCceEEEEecC
Confidence 468899999 899999987654
No 274
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=20.48 E-value=1.7e+02 Score=25.46 Aligned_cols=38 Identities=24% Similarity=0.224 Sum_probs=31.6
Q ss_pred ceEEEE-eCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIV-PYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~-p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
.+++++ .-+|-|=..-...||..|+++|.+|-++.+..
T Consensus 8 ~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 455554 45677999999999999999999999999875
No 275
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=20.48 E-value=1.4e+02 Score=21.07 Aligned_cols=31 Identities=6% Similarity=-0.067 Sum_probs=25.5
Q ss_pred CccChhHHHHHHHHHHhCCCcEEEEeCcccc
Q 027763 18 SQGHINPTFQFAKRLASKGLKITLAITNFIY 48 (219)
Q Consensus 18 ~~GH~~P~l~La~~L~~rG~~VT~~t~~~~~ 48 (219)
..|...-+.+.++.+.++|..|..+|.....
T Consensus 105 ~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s 135 (183)
T 2xhz_A 105 NSGESSEITALIPVLKRLHVPLICITGRPES 135 (183)
T ss_dssp SSSCCHHHHHHHHHHHTTTCCEEEEESCTTS
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4577788899999999999999988886543
No 276
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=20.43 E-value=68 Score=23.92 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCcEEEEeC
Q 027763 25 TFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~t~ 44 (219)
-..++++|+++|++|+++.-
T Consensus 15 G~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 15 GLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 46889999999999988764
No 277
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=20.41 E-value=1.4e+02 Score=24.01 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=32.6
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
....|++...|..+|..|..+++++..++|.+|...+..
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~ 119 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKS 119 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCH
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCch
Confidence 345689889899999999999999999999887765543
No 278
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=20.38 E-value=63 Score=23.99 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=16.0
Q ss_pred HHHHHHHHHhCCCcEEEE
Q 027763 25 TFQFAKRLASKGLKITLA 42 (219)
Q Consensus 25 ~l~La~~L~~rG~~VT~~ 42 (219)
-..++++|+++|++|+++
T Consensus 14 G~~~a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 14 GRAIALRLAEDGFALAIH 31 (245)
T ss_dssp HHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 468999999999999987
No 279
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.36 E-value=1.8e+02 Score=21.26 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=23.5
Q ss_pred eEEEEeCCCccC--hhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGH--INPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH--~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
-|+++. ...|+ ..-+..+++.|+++|++|..+--
T Consensus 29 ~vvl~H-G~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 29 LCIIIH-GFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEC-CTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEEc-CCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 344444 45566 56678899999999998766443
No 280
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=20.36 E-value=1.2e+02 Score=20.37 Aligned_cols=42 Identities=12% Similarity=0.036 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCCCccEEEeCCCccc--HHHHHHHc-----CCCeeEEechh
Q 027763 96 AELITKYKSSSNPIDCVVYDAFLYW--ALDVAKGF-----GLFSAAFFTQT 139 (219)
Q Consensus 96 ~~~l~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~~~~~~ 139 (219)
.+.++.+.. .++|+||.|..++. +.++.+.+ ++|.+++....
T Consensus 37 ~~a~~~l~~--~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 37 TEALAGLSA--DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHHHTCCT--TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 344444422 45899999987642 34444332 68888776544
No 281
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.35 E-value=68 Score=24.23 Aligned_cols=33 Identities=15% Similarity=-0.047 Sum_probs=23.5
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.+++.-.+.| --.++|++|+++|++|.++.-.
T Consensus 23 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 23 KNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 46666644432 3478999999999998877644
No 282
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=20.33 E-value=69 Score=23.98 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=22.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+.+++.- +.|- --..++++|+++|++|+++.-
T Consensus 12 k~vlITG-asgg--iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTG-AGSG--IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEET-TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC-CCcH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4555553 3332 356899999999999988764
No 283
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=20.23 E-value=55 Score=26.68 Aligned_cols=26 Identities=15% Similarity=0.264 Sum_probs=22.8
Q ss_pred cChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 20 GHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 20 GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
||+.|.+.-.+.|.+.||++.++...
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 89998888888899999999988765
No 284
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.20 E-value=69 Score=23.90 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=22.5
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.+++.- +.| .--..++++|+++|++|+++.-.
T Consensus 7 k~vlVtG-asg--giG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 7 KVAIITG-GTL--GIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp CEEEETT-TTS--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeC-CCC--hHHHHHHHHHHHCCCEEEEEeCC
Confidence 3455553 333 23568999999999999887643
No 285
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.17 E-value=57 Score=24.30 Aligned_cols=32 Identities=13% Similarity=-0.026 Sum_probs=22.0
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+.+++.-.+ | ---..++++|+++|++|+++.-
T Consensus 4 k~vlITGas-~--gIG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 4 GKVIVYGGK-G--ALGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp EEEEEETTT-S--HHHHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEECCC-c--HHHHHHHHHHHHCCCEEEEEec
Confidence 345555333 3 2347899999999999988754
No 286
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=20.16 E-value=1.4e+02 Score=21.72 Aligned_cols=39 Identities=10% Similarity=-0.047 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCccChh---HHHHHHHHHHhCCCcEEEEeCc
Q 027763 7 HRAHVLIVPYPSQGHIN---PTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~---P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+++.|+++..-+.+.-. -+..+++.|.++|++|.++..+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p 45 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAP 45 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCS
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCC
Confidence 45677777754443222 2447899999999999887766
No 287
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.15 E-value=1.8e+02 Score=18.98 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=13.6
Q ss_pred CccEEEeCCCccc--HHHHHHH
Q 027763 108 PIDCVVYDAFLYW--ALDVAKG 127 (219)
Q Consensus 108 ~~d~vI~D~~~~~--~~~vA~~ 127 (219)
++|+||.|..++. +.++.++
T Consensus 54 ~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 54 QFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp CCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHH
Confidence 5899999987753 4444443
No 288
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.14 E-value=70 Score=24.07 Aligned_cols=32 Identities=6% Similarity=0.053 Sum_probs=22.0
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+++++.-.+ | ---..++++|+++|++|+++.-
T Consensus 6 k~vlVTGas-~--giG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAA-H--GIGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-C--HHHHHHHHHHHHCCCEEEEEeC
Confidence 345555333 3 2356789999999999988754
No 289
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=20.12 E-value=70 Score=23.68 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=22.3
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
+++++.-.+.| --..+|++|+++|++|.++.-
T Consensus 3 k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45556643332 346899999999999887654
No 290
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=20.12 E-value=69 Score=24.14 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=22.8
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+.+++.-.+ |- --.+++++|+++|++|+++.-.
T Consensus 13 k~vlVTGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 13 LVAVITGGA-SG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555333 32 3578999999999999887543
No 291
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=20.09 E-value=1.3e+02 Score=22.10 Aligned_cols=36 Identities=14% Similarity=0.053 Sum_probs=24.7
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
+-|+++. ...|+..-+..+++.|+++|++|..+.-.
T Consensus 43 ~~vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 43 ALIFVSH-GAGEHSGRYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp EEEEEEC-CTTCCGGGGHHHHHHHHHTTEEEEEECCT
T ss_pred eEEEEEC-CCCchhhHHHHHHHHHHhCCCcEEEeCCC
Confidence 3455555 44456667788999999999887766543
No 292
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=20.08 E-value=1e+02 Score=22.90 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=26.4
Q ss_pred eEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 10 HVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 10 hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.++++-..+.|+..-+..+++.|+++|+.|..+...
T Consensus 50 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 85 (258)
T 2fx5_A 50 PVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETS 85 (258)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCS
T ss_pred eEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCC
Confidence 345555555567778889999999999988766543
No 293
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=20.08 E-value=1.1e+02 Score=23.96 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=31.1
Q ss_pred CceEEEEe--CCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 8 RAHVLIVP--YPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 8 ~~hvvv~p--~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.+++++. -++.|=..-...||..|+++|.+|-++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34555554 3678999999999999999999999987654
No 294
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=20.07 E-value=98 Score=22.41 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=25.8
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCcc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITNF 46 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~~ 46 (219)
+.|++++-.+ |+..-...++..|+++|++|..+.-..
T Consensus 5 ~~vv~lHG~~-~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 5 HHFVLVHNAY-HGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp CEEEEECCTT-CCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CcEEEECCCC-CccccHHHHHHHHHhCCCEEEEecCCC
Confidence 4577776444 444447789999999999987765443
No 295
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=20.03 E-value=1e+02 Score=25.71 Aligned_cols=33 Identities=21% Similarity=0.212 Sum_probs=24.1
Q ss_pred CCceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeC
Q 027763 7 HRAHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAIT 44 (219)
Q Consensus 7 ~~~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~ 44 (219)
++.+|+|+-....| +..|..|+++|++|+++--
T Consensus 10 ~~~~v~IIGaG~aG-----l~aA~~L~~~g~~v~v~E~ 42 (489)
T 2jae_A 10 GSHSVVVLGGGPAG-----LCSAFELQKAGYKVTVLEA 42 (489)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 44578887644333 5678889999999999743
No 296
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=20.02 E-value=63 Score=25.89 Aligned_cols=32 Identities=22% Similarity=-0.107 Sum_probs=24.9
Q ss_pred ccEEEeCCCccc--HHHHHHHcCCCeeEEechhh
Q 027763 109 IDCVVYDAFLYW--ALDVAKGFGLFSAAFFTQTC 140 (219)
Q Consensus 109 ~d~vI~D~~~~~--~~~vA~~lgiP~v~~~~~~a 140 (219)
..-+|.|+|++. +..+|.++|..++.+=....
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~ 285 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMKPE 285 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHH
Confidence 466899999976 46888999998888755543
No 297
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.02 E-value=1.4e+02 Score=23.03 Aligned_cols=33 Identities=15% Similarity=-0.034 Sum_probs=25.6
Q ss_pred CCccEEEeCCCcc----------cHHHHHHHcCCCeeEEechh
Q 027763 107 NPIDCVVYDAFLY----------WALDVAKGFGLFSAAFFTQT 139 (219)
Q Consensus 107 ~~~d~vI~D~~~~----------~~~~vA~~lgiP~v~~~~~~ 139 (219)
..+|+||.|.... ...++|+.++.|++......
T Consensus 125 ~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 125 RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 4689999987422 24689999999999887664
No 298
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=20.01 E-value=64 Score=25.18 Aligned_cols=33 Identities=12% Similarity=0.031 Sum_probs=23.6
Q ss_pred ceEEEEeCCCccChhHHHHHHHHHHhCCCcEEEEeCc
Q 027763 9 AHVLIVPYPSQGHINPTFQFAKRLASKGLKITLAITN 45 (219)
Q Consensus 9 ~hvvv~p~p~~GH~~P~l~La~~L~~rG~~VT~~t~~ 45 (219)
.+|+|.- +.|.+ -..++++|+++||+|+.++-.
T Consensus 5 ~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIYG--GTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEEc--CCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 3566554 44554 347899999999999988754
Done!