Query 027765
Match_columns 219
No_of_seqs 160 out of 1232
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 14:50:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027765.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027765hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02547 dUTP pyrophosphatase 100.0 2.8E-48 6.1E-53 321.8 18.2 154 56-219 1-154 (157)
2 PHA03094 dUTPase; Provisional 100.0 1.1E-46 2.5E-51 307.8 17.4 140 80-219 4-143 (144)
3 PHA02703 ORF007 dUTPase; Provi 100.0 1.5E-45 3.3E-50 307.7 17.2 140 80-219 12-151 (165)
4 COG0756 Dut dUTPase [Nucleotid 100.0 3.2E-45 6.9E-50 299.7 15.6 137 83-219 8-147 (148)
5 TIGR00576 dut deoxyuridine 5'- 100.0 2.9E-44 6.4E-49 292.3 16.3 138 82-219 1-141 (141)
6 PRK00601 dut deoxyuridine 5'-t 100.0 8.2E-44 1.8E-48 292.6 17.0 139 81-219 7-149 (150)
7 PTZ00143 deoxyuridine 5'-triph 100.0 8.4E-43 1.8E-47 288.7 15.9 137 82-219 3-154 (155)
8 PRK13956 dut deoxyuridine 5'-t 100.0 5.8E-41 1.3E-45 275.5 14.5 132 83-219 8-147 (147)
9 KOG3370 dUTPase [Nucleotide tr 100.0 2.9E-40 6.3E-45 266.1 8.0 139 81-219 2-140 (140)
10 PF00692 dUTPase: dUTPase; In 100.0 1.2E-37 2.7E-42 247.4 12.6 128 90-218 2-129 (129)
11 PHA03124 dUTPase; Provisional 100.0 1.8E-34 4E-39 264.5 14.7 129 87-219 271-418 (418)
12 PHA03123 dUTPase; Provisional 100.0 8.6E-34 1.9E-38 260.8 17.3 211 4-219 131-401 (402)
13 PHA03126 dUTPase; Provisional 100.0 4.4E-30 9.5E-35 232.2 13.4 125 90-219 168-326 (326)
14 PHA03130 dUTPase; Provisional 100.0 2E-29 4.3E-34 229.4 14.1 125 89-219 203-368 (368)
15 PHA03127 dUTPase; Provisional 100.0 3.1E-29 6.8E-34 227.4 13.1 122 93-219 168-322 (322)
16 PHA03129 dUTPase; Provisional 100.0 5.5E-28 1.2E-32 225.1 13.0 125 90-219 278-436 (436)
17 PHA03131 dUTPase; Provisional 99.9 6E-27 1.3E-31 210.6 13.4 98 90-193 123-221 (286)
18 cd07557 trimeric_dUTPase Trime 99.9 9.4E-27 2E-31 174.4 9.9 88 102-190 1-92 (92)
19 PHA03131 dUTPase; Provisional 99.9 3.3E-24 7.2E-29 192.8 15.1 126 78-209 4-129 (286)
20 PHA01707 dut 2'-deoxyuridine 5 99.9 2E-22 4.4E-27 167.1 11.4 86 109-196 52-137 (158)
21 TIGR02274 dCTP_deam deoxycytid 99.9 5.3E-22 1.2E-26 167.0 13.3 90 109-199 68-159 (179)
22 PRK00416 dcd deoxycytidine tri 99.8 2.9E-20 6.2E-25 156.4 13.4 87 109-196 68-154 (177)
23 COG0717 Dcd Deoxycytidine deam 99.8 4E-18 8.8E-23 144.8 13.5 105 90-195 51-157 (183)
24 PHA03129 dUTPase; Provisional 99.8 1.5E-18 3.2E-23 162.3 8.8 78 118-199 76-159 (436)
25 PRK02253 deoxyuridine 5'-triph 99.8 3.7E-18 8.1E-23 142.5 10.1 85 110-196 70-154 (167)
26 PRK07559 2'-deoxycytidine 5'-t 99.5 4.3E-14 9.3E-19 131.2 9.1 83 109-193 79-169 (365)
27 PHA03127 dUTPase; Provisional 99.5 1.3E-13 2.9E-18 125.7 9.8 83 119-202 63-148 (322)
28 PHA03128 dUTPase; Provisional 99.3 1E-11 2.3E-16 114.2 9.5 95 90-192 202-297 (376)
29 PRK07559 2'-deoxycytidine 5'-t 99.2 4.1E-11 8.9E-16 111.5 9.5 83 110-196 246-338 (365)
30 PHA03128 dUTPase; Provisional 99.1 5.2E-10 1.1E-14 103.1 12.8 127 79-214 86-212 (376)
31 PHA03125 dUTPase; Provisional 99.1 6.2E-10 1.3E-14 102.4 9.7 95 90-193 247-342 (376)
32 PF06559 DCD: 2'-deoxycytidine 98.9 2.2E-09 4.8E-14 98.7 8.1 82 110-193 79-168 (364)
33 PHA03125 dUTPase; Provisional 98.8 9.2E-08 2E-12 88.3 13.1 117 78-205 130-249 (376)
34 PHA03126 dUTPase; Provisional 98.6 2.6E-07 5.6E-12 84.7 10.0 81 119-201 53-150 (326)
35 PHA03123 dUTPase; Provisional 97.4 0.00064 1.4E-08 64.0 8.7 78 119-197 85-164 (402)
36 PHA03130 dUTPase; Provisional 97.3 0.00082 1.8E-08 62.5 7.9 73 119-195 59-132 (368)
37 PF04797 Herpes_ORF11: Herpesv 96.5 0.017 3.7E-07 54.2 9.5 85 103-192 264-351 (379)
38 PF06559 DCD: 2'-deoxycytidine 96.4 0.013 2.9E-07 54.5 8.1 83 111-196 247-338 (364)
39 PF05784 Herpes_UL82_83: Betah 96.1 0.0014 3E-08 61.2 0.0 87 99-192 256-342 (348)
40 PHA03365 hypothetical protein; 88.1 5.2 0.00011 38.5 10.2 78 110-192 292-371 (419)
41 PF06284 Cytomega_UL84: Cytome 80.0 9.3 0.0002 37.1 8.1 84 100-193 372-455 (530)
42 PHA03124 dUTPase; Provisional 58.0 43 0.00092 32.2 7.3 82 110-194 33-131 (418)
43 PF05784 Herpes_UL82_83: Betah 53.5 4.4 9.5E-05 38.0 0.0 75 106-180 13-92 (348)
44 PF09160 FimH_man-bind: FimH, 48.2 20 0.00043 29.9 3.1 95 102-196 13-135 (147)
45 cd00235 TLP-20 Telokin-like pr 43.3 48 0.001 26.3 4.4 27 162-190 80-106 (108)
46 PF04489 DUF570: Protein of un 42.6 2E+02 0.0044 27.9 9.2 87 97-190 340-428 (429)
47 PF06030 DUF916: Bacterial pro 38.5 38 0.00082 26.9 3.2 30 109-140 84-114 (121)
48 COG4525 TauB ABC-type taurine 35.1 27 0.00059 31.3 2.1 42 125-167 23-64 (259)
49 COG1124 DppF ABC-type dipeptid 32.3 50 0.0011 29.9 3.3 64 125-194 25-92 (252)
50 PF06088 TLP-20: Nucleopolyhed 26.9 1.1E+02 0.0023 26.1 4.2 28 163-192 81-108 (169)
51 PF04254 DUF432: Protein of un 25.2 3.5E+02 0.0077 21.5 6.9 23 157-180 88-110 (123)
52 PLN03211 ABC transporter G-25; 23.2 2E+02 0.0044 29.0 6.1 47 121-167 82-129 (659)
53 PF00818 Ice_nucleation: Ice n 21.2 42 0.00092 17.9 0.5 6 213-218 1-6 (16)
No 1
>PLN02547 dUTP pyrophosphatase
Probab=100.00 E-value=2.8e-48 Score=321.77 Aligned_cols=154 Identities=86% Similarity=1.291 Sum_probs=147.3
Q ss_pred CCcCCCCCCCcccccCCccccCCcceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCce
Q 027765 56 PEVKEPSPKIPKLHQNGVENDNIGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTY 135 (219)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~ 135 (219)
|.+.||++|++| .-+.++||++++++++|+|++++||||||+++++++|+|++.++|+||+++++|+||+
T Consensus 1 ~~~~~~~~~~~~----------~~~~i~vk~l~~~a~lP~r~t~g~AG~DL~~~~d~~i~P~~~~li~tgi~v~iP~g~~ 70 (157)
T PLN02547 1 PAVQEPPPKIQK----------PSPLLRVKKLSEKATLPSRGSALAAGYDLSSAYDTVVPARGKALVPTDLSIAIPEGTY 70 (157)
T ss_pred CcccCCCccccC----------CCceEEEEEeCCCCCCCCcCCCCccCeeEecCCCeEECCCCEEEEEeceEEEcCCCeE
Confidence 567899999884 3458999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCC
Q 027765 136 ARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFG 215 (219)
Q Consensus 136 g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFG 215 (219)
|+|++||||++|++|.+.+|+||+||+|||++.|+|++++++.|++|||||||||.++..+++++|++|++|+||+||||
T Consensus 71 g~i~~RSgla~k~gi~~~~GvID~~Y~Gei~v~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFG 150 (157)
T PLN02547 71 ARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVGDRIAQLILEKIVTPEVVEVEDLDATVRGAGGFG 150 (157)
T ss_pred EEEEccccccccCcEecCCceECCCCCCceEEEEEeCCCCCEEEcCCCEEEEEEEEEeeeccEEEecccCcccccCCCcC
Confidence 99999999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCC
Q 027765 216 STGV 219 (219)
Q Consensus 216 STG~ 219 (219)
|||+
T Consensus 151 STG~ 154 (157)
T PLN02547 151 STGV 154 (157)
T ss_pred cCcc
Confidence 9995
No 2
>PHA03094 dUTPase; Provisional
Probab=100.00 E-value=1.1e-46 Score=307.85 Aligned_cols=140 Identities=53% Similarity=0.865 Sum_probs=136.6
Q ss_pred ceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcC
Q 027765 80 SLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDA 159 (219)
Q Consensus 80 ~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDs 159 (219)
+.+++++++++|.+|+|++++||||||+++++++|+|++.++|+||++++||+||+|+|++|||+++|+||.+.+|+||+
T Consensus 4 ~~~~~~~l~~~a~~P~~~~~~~aG~Dl~a~~~~~i~P~~~~lv~Tg~~i~ip~g~~g~i~~RSsla~k~Gl~v~~GvID~ 83 (144)
T PHA03094 4 SPVRCVKLSNFAKIPTRSSPKSAGYDLYSAYDYTVPPKERILVKTDISLSIPKFCYGRIAPRSGLSLNYGIDIGGGVIDE 83 (144)
T ss_pred ceEEEEEcCCCCCCCCcCCCCcccEEEecCCCeEECCCCEEEEEcCeEEEcCCCEEEEEEccccccccCCeeecCceECC
Confidence 46999999999999999999999999999999999999999999999999999999999999999988899888999999
Q ss_pred CCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 160 DYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 160 gYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||||||++.|+|++++++.|++|||||||||.++..+++++|++|++|+||+|||||||+
T Consensus 84 gYrGei~v~l~N~~~~~~~I~~G~RIaQlvf~~~~~~~~~~v~~l~~t~Rg~~GFGSTG~ 143 (144)
T PHA03094 84 DYRGNIGVIFINNGKCTFNIKTGDRIAQIIFERIEYPELKEVQSLDSTDRGDQGFGSSGL 143 (144)
T ss_pred CCCCceEEEEEECCCCCeEECCCCEEEEEEEEEcccCcEEEecccCcccccCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999995
No 3
>PHA02703 ORF007 dUTPase; Provisional
Probab=100.00 E-value=1.5e-45 Score=307.67 Aligned_cols=140 Identities=63% Similarity=0.917 Sum_probs=136.4
Q ss_pred ceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcC
Q 027765 80 SLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDA 159 (219)
Q Consensus 80 ~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDs 159 (219)
..++|+++++++.+|+|++++||||||+++++++|+|++.++|+||++++||+||++++++|||+++|++|.+..|+||+
T Consensus 12 ~~i~v~~l~~~a~lP~~at~g~AGyDL~a~~d~vi~P~~~~lv~TGi~i~iP~g~~g~i~~RSsla~kg~i~v~~GvID~ 91 (165)
T PHA02703 12 DALRVVRLSPNATIPTRGSPGAAGLDLCSACDCIVPAGCRCVVFTDLLIKLPDGCYGRIAPRSGLAVKHFIDVGAGVIDA 91 (165)
T ss_pred cEEEEEEeCCCCCCCCCCCCCCcCccEecCCCeEECCCCEEEEeCCeEEEcCCCeEEEEECCccchhcCCEecccceECC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999778888999999
Q ss_pred CCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 160 DYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 160 gYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||+|||++.|+|++++++.|++|+|||||||.++..+++++|++|++|+||+|||||||.
T Consensus 92 gYrGei~v~l~N~~~~~~~I~~G~RIaQLVf~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 151 (165)
T PHA02703 92 DYRGNVGVVLFNFGHNDFEVKKGDRIAQLICERAAFPAVEEVACLDDTDRGAGGFGSTGS 151 (165)
T ss_pred CCcCceEEEEEECCCCCEEeCCCCEEEEEEEEEcccceEEEecccccCcCCCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999999999999995
No 4
>COG0756 Dut dUTPase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.2e-45 Score=299.73 Aligned_cols=137 Identities=51% Similarity=0.820 Sum_probs=132.2
Q ss_pred EEEEccCCCCCCcccCCCccceeeeCCCC-CeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc--cceEEcC
Q 027765 83 RVKKLSEKAVLPKRGSPLAAGYDLSSAAE-TKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDA 159 (219)
Q Consensus 83 ~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed-~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v--~~GVIDs 159 (219)
..+++.+.+.+|+|+++++|||||+++++ ++|.|+++.+||||++++||+|++++++||||++.|+||.+ ++|+||+
T Consensus 8 ~~~~~~~~~~lP~y~t~gsAG~DLrA~~~~~~i~pg~~~LVpTGl~~~ip~g~~~~v~PRSgla~k~Gi~~~Ns~G~IDs 87 (148)
T COG0756 8 LDKRLNEGAPLPKYATEGSAGYDLRAAEDEVTIAPGERKLVPTGLAIELPEGYEAQVRPRSGLALKHGITLGNSPGTIDS 87 (148)
T ss_pred EEeecCCCCcCCeeecCCccceeeecccceeEECCCCeEEecCCEEEEcCCCcEEEEeccccCceeceEEEecCCceECC
Confidence 36678889999999999999999999999 89999999999999999999999999999999999999975 5999999
Q ss_pred CCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 160 DYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 160 gYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||||||++.|+|+++++|+|++||||||+||.++..+++.+|+++++|+||+|||||||.
T Consensus 88 DYrGei~V~l~N~~~~~f~ie~GdRIaQ~V~~~v~~~~~~~v~~~~~t~rg~GGFGSTG~ 147 (148)
T COG0756 88 DYRGEIKVLLINLGDEDFVIEKGDRIAQLVFVKVLQAEFDEVENLDETERGTGGFGSTGV 147 (148)
T ss_pred CCCceEEEEEEeCCCCCEEecCCCEEEEEEEEEEEecceeeeecccccccccCCCCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999995
No 5
>TIGR00576 dut deoxyuridine 5'-triphosphate nucleotidohydrolase (dut). Changed role from 132 to 123. RTD
Probab=100.00 E-value=2.9e-44 Score=292.27 Aligned_cols=138 Identities=59% Similarity=0.937 Sum_probs=132.9
Q ss_pred EEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccc--cccceEEcC
Q 027765 82 LRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSM--DVGAGVIDA 159 (219)
Q Consensus 82 l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL--~v~~GVIDs 159 (219)
++++++++++.+|+|++++||||||+++++++|+|+++++|+|++++.+|+||++++++|||+++|+|| .+.+|+||+
T Consensus 1 ~~~~~~~~~a~~P~~~~~~~aGyDl~~~~d~~i~P~~~~lv~tg~~v~ip~g~~~~i~~RSsl~~k~gi~v~~~~GvID~ 80 (141)
T TIGR00576 1 LKFVKLSENAPLPTYATEGAAGYDLYAAEDVTIPPGERALVPTGIAIELPDGYYGRVAPRSGLALKHGVTIDNSPGVIDS 80 (141)
T ss_pred CeEEEcCCCCCCCCCCCCCccCeeEecCCCeEECCCCEEEEEeCcEEecCCCEEEEEEecccCcccCCEEEeecCceECC
Confidence 578999999999999999999999999999999999999999999999999999999999999988885 567999999
Q ss_pred CCccceEEEEEeCCCCcEEEeCCCEEEEEEEeeccc-ccEEEeccCCCCcCCCCCCCCcCC
Q 027765 160 DYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVT-PDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 160 gYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~-p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||+|||++.|+|+++.++.|++|+|||||||.++.. +++++++++++|+||+|||||||+
T Consensus 81 gy~Gei~v~l~N~~~~~~~i~~G~rIaQlV~~~~~~~~~~~~~~~~~~t~RG~~gfGSTg~ 141 (141)
T TIGR00576 81 DYRGEIKVILINLGKEDFTVKKGDRIAQLVVEKIVTVPEFEEVEELDETERGEGGFGSTGV 141 (141)
T ss_pred CCCCceeEEEEeCCCCCEEEcCCCEEEEEEEEeccccccEEEeCccCCccccCCCCCCCCC
Confidence 999999999999999999999999999999999988 889999999999999999999996
No 6
>PRK00601 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=8.2e-44 Score=292.62 Aligned_cols=139 Identities=43% Similarity=0.674 Sum_probs=134.3
Q ss_pred eEEEEEccCCCCCCcccCCCccceeeeCCC--CCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc--cceE
Q 027765 81 LLRVKKLSEKAVLPKRGSPLAAGYDLSSAA--ETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGV 156 (219)
Q Consensus 81 ~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~e--d~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v--~~GV 156 (219)
.++++++.+++.+|+|++++||||||++++ +++|+|+++++|+||+++.+|+||+++|++|||+++|+||.+ .+|+
T Consensus 7 ~~~~~~~~~~~~~P~~~~~~daG~Dl~~~~~~~i~i~P~~~~lv~tg~~v~~p~~~~~~i~~RSsla~k~Gl~v~~~~Gv 86 (150)
T PRK00601 7 KILDPRLGKEFPLPAYATEGSAGLDLRACLDEPVTLAPGERALVPTGLAIHIPDGYEAQILPRSGLAHKHGIVLGNLPGT 86 (150)
T ss_pred EEEEEEcCCCCCCCccCCCCCcCEeEEecCCCCCEECCCCeEEEEcCEEEECCCCeEEEEEeCCcccccCCEEEecCcce
Confidence 589999999999999999999999999987 899999999999999999999999999999999998888865 6899
Q ss_pred EcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 157 IDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 157 IDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||+||+||+++.|+|+++.++.|++|+|||||||.++..+++++|++|++|+||+|||||||.
T Consensus 87 ID~gy~Gei~i~l~N~~~~~v~I~~G~rIaQlv~~~~~~~~~~~~~~l~~t~RG~~gFGSTG~ 149 (150)
T PRK00601 87 IDSDYRGELKVSLWNRGQEPFTIEPGERIAQLVIVPVVQAEFEEVEEFDETERGAGGFGSTGR 149 (150)
T ss_pred eCCCCCCceEEEEEeCCCCCEEECCCCEEEEEEEecccccceEEecccCcccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999995
No 7
>PTZ00143 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=8.4e-43 Score=288.66 Aligned_cols=137 Identities=30% Similarity=0.411 Sum_probs=129.7
Q ss_pred EEEEEccCCCC----CCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCC---------CceEEEEcCCCccccc
Q 027765 82 LRVKKLSEKAV----LPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPE---------GTYARIAPRSGLAWKH 148 (219)
Q Consensus 82 l~Vkkl~~~a~----lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~---------g~~g~I~pRSSla~K~ 148 (219)
++|+++++.+. +|+|++++||||||+++++++|+|+++++|+||+++++|+ ||+++|++|||++ |+
T Consensus 3 ~~i~~~~~~~~~~~~~p~~~~~~dAG~DL~a~~~~~i~Pg~~~~V~tGi~i~~p~~~~~~~~~~g~~~~i~~RSsla-~~ 81 (155)
T PTZ00143 3 LKILPLNDEVRELYKNHKTFHEGDSGLDLFIVKDQTIKPGETAFIKLGIKAAAFQKDEDGSDGKNVSWLLFPRSSIS-KT 81 (155)
T ss_pred EEEEEcChhhhccccCCccCCCCccccCEecCCCeEECCCCEEEEECCeEEEcccccccccCCCCEEEEEEccCccc-cc
Confidence 88999987655 9999999999999999999999999999999999999986 9999999999999 55
Q ss_pred cccc--cceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 149 SMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 149 gL~v--~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
||.+ +.|+||+||+|||++.+.|+++++++|++|||||||||+++..+++++|++|++|+||+|||||||.
T Consensus 82 gl~l~n~~GvID~gYrGei~v~l~N~~~~~~~I~~G~RIaQlVi~~~~~~~~~~v~~l~~t~RG~gGFGSTG~ 154 (155)
T PTZ00143 82 PLRLANSIGLIDAGYRGELIAAVDNIKDEPYTIKKGDRLVQLVSFDGEPITFELVDELDETTRGEGGFGSTGR 154 (155)
T ss_pred CeEecccCCeECCCCCccEEEEEEECCCCCeEECCCCEEEEEEEEecceeeEEEeCcCCCccccCCccCCCCC
Confidence 8754 6999999999999999999999999999999999999999999999999999999999999999995
No 8
>PRK13956 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=5.8e-41 Score=275.55 Aligned_cols=132 Identities=33% Similarity=0.479 Sum_probs=121.2
Q ss_pred EEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc--cceEEcCC
Q 027765 83 RVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDAD 160 (219)
Q Consensus 83 ~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v--~~GVIDsg 160 (219)
.|+++.+.+++|+|++++||||||+++++++|+|++.++|+||+++++|+||+++|++|||+++|+||.+ ++|+||+|
T Consensus 8 ~~~~~~~~~~lP~r~t~~sAG~DL~a~~~~~i~p~~~~lv~TGi~i~lP~g~~~~I~~RSsla~k~Gl~l~n~~GvIDsd 87 (147)
T PRK13956 8 LVSSFTNENLLPKRETAHAAGYDLKVAERTVIAPGEIKLVPTGVKAYMQPGEVLYLYDRSSNPRKKGLVLINSVGVIDGD 87 (147)
T ss_pred EEEeccCCCCCCCcCCCCCCCcccccCCCeEECCCCEEEEECCeEEECCCCeEEEEecCchhhhhCCEEEcCcCCeEcCC
Confidence 4668888999999999999999999999999999999999999999999999999999999999988864 69999999
Q ss_pred Cc------cceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 161 YR------GPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 161 Yr------GEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
|| |+|++.+.|+++.+++|++|||||||||.++..++++ ..|.||+|||||||+
T Consensus 88 YrGe~~~~G~i~v~l~N~~~~~~~I~~GdRIAQlv~~p~~~~~~~-----~~~~r~~gGFGSTG~ 147 (147)
T PRK13956 88 YYGNPANEGHIFAQMKNITDQEVVLEVGERIVQGVFMPFLIADGD-----QADGERTGGFGSTGK 147 (147)
T ss_pred CCCCCCCCcEEEEEEEeCCCCCEEECCCCEEEEEEEEEEEEcccc-----ccccccCCCCCCCCC
Confidence 98 5699999999999999999999999999998765543 247799999999995
No 9
>KOG3370 consensus dUTPase [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=266.09 Aligned_cols=139 Identities=69% Similarity=1.096 Sum_probs=136.5
Q ss_pred eEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCC
Q 027765 81 LLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDAD 160 (219)
Q Consensus 81 ~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsg 160 (219)
++++.++++.|..|+|++.++||||||+.++.+++|....+|+|++.+++|.+++|.+.+||++|+|++|.+..|+||+|
T Consensus 2 ~l~~~~~s~~a~~p~Rgs~~aaGydl~sa~~~~vpa~gk~~V~td~q~~vP~g~ygRvaprsglA~k~~I~~gagvVd~d 81 (140)
T KOG3370|consen 2 MLRFAKLSESATIPTRGSAGAAGYDLYSAQDGTVPARGKAVVDTDLQIAVPSGYYGRVAPRSGLAWKHFIDVGAGVVDPD 81 (140)
T ss_pred ccchhhcchhhcccccCCccccccchhhhcccccCcccceeccccceeecCcceeeeecccccchhhccccccCceeccc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcCC
Q 027765 161 YRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219 (219)
Q Consensus 161 YrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG~ 219 (219)
|+||+.+.|+|+++.+|.+++|||||||++.++..|++..|+.|++|+||++||||||+
T Consensus 82 yrgeV~v~LfN~~~~~F~~k~Gdriaqli~~~i~~~~i~~v~sLe~t~Rg~~Gfgstg~ 140 (140)
T KOG3370|consen 82 YRGEVGVLLFNHSDRDFEYKKGDRIAQLIVEKIVTPEIVLVSSLEATERGAGGFGSTGV 140 (140)
T ss_pred ccceeEEEEecCCCcceeeecCCcceeeEEEecCCCceehhhhHHHHhhhccCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999995
No 10
>PF00692 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): dUTP diphosphatase, Deoxyuridine-triphosphatase The essential enzyme dUTP pyrophosphatase (3.6.1.23 from EC) is specific for dUTP and is critical for the fidelity of DNA replication and repair. dUTPase hydrolyzes dUTP to dUMP and pyrophosphate, simultaneously reducing dUTP levels and providing the dUMP for dTTP biosynthesis. dUTPase decreases the intracellular concentration of dUPT so that uracil cannot be incorporated into DNA []. The crystal structure of human dUTPase reveals that each subunit of the dUTPase trimer folds into an eight-stranded jelly-roll beta barrel, with the C-terminal beta strands interchanged among the subunits. The structure is similar to that of the Escherichia coli enzyme, despite low sequence homology between the two enzymes []. Other enzymes like deoxycytidine triphosphate deaminase (dCTP) (3.5.4.13 from EC) that specifically bind uridine also belong to this group suggesting that the signature may recognise a putative uridine-binding motif. Some retroviruses encode dUTPases. Retroviral dUTPase is synthesised as part of POL polyprotein that contains; an aspartyl protease, a reverse transcriptase, dUTPase and RNase H. ; GO: 0016787 hydrolase activity, 0046080 dUTP metabolic process; PDB: 4DHK_A 1DUC_A 1DUN_A 3LQW_A 2BT1_A 2WE1_A 2WE0_A 2WE2_A 2BSY_A 2WE3_A ....
Probab=100.00 E-value=1.2e-37 Score=247.41 Aligned_cols=128 Identities=50% Similarity=0.788 Sum_probs=119.5
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVIL 169 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L 169 (219)
.+.+|++++++||||||+++++++|+|+++++|+|++.+.+|++++++|++|||++++ |+.+.+|+||+||+|+|++.+
T Consensus 2 ~~~~~~~~~~~~ag~Dl~~~~~~~i~p~~~~~v~t~~~~~~p~~~~~~i~~RSsl~~~-gl~v~~gvid~~y~G~i~i~i 80 (129)
T PF00692_consen 2 EAEIPKRARPGDAGYDLYAPEDFVIPPGETVLVPTGEEINIPPGYYALILPRSSLARK-GLIVHPGVIDPGYRGEIKIII 80 (129)
T ss_dssp TCCSBBESSTTSSSEEEE-SSSEEEETTEEEEEEEEEEEE-STTEEEEEEE-HHHHHH-TEEEETEEEETTBESEEEEEE
T ss_pred CccccCCCCCCceeEEEEcCCCEEECCCCEEEEEeCeEEECCCCcEEEEecCchHHhc-CccccCcccCCCcccceEEEE
Confidence 5789999999999999999999999999999999999999999999999999999865 888888999999999999999
Q ss_pred EeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCCCCcC
Q 027765 170 FNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTG 218 (219)
Q Consensus 170 ~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGFGSTG 218 (219)
.|+++.++.|++|+|||||+|.++..+.++.+++++.+.||++||||||
T Consensus 81 ~N~s~~~~~i~~G~riaQlv~~~~~~~~~~~~~~~~~~~rg~~Gfgstg 129 (129)
T PF00692_consen 81 YNHSDEPIRIEKGDRIAQLVFIPLSTPPVEPVEEFSNTERGEGGFGSTG 129 (129)
T ss_dssp EESSSSSEEEETTSEEEEEEEEEBESEEEEEESSTTTSSSTTTSTTTT-
T ss_pred EeccceeccccCCCEEEEEEEEecCccceEEccccCCccCCCCCCCCCC
Confidence 9999999999999999999999999988899999999999999999998
No 11
>PHA03124 dUTPase; Provisional
Probab=100.00 E-value=1.8e-34 Score=264.46 Aligned_cols=129 Identities=28% Similarity=0.351 Sum_probs=116.7
Q ss_pred ccCCCCCCcc-----cCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc-cceEEcCC
Q 027765 87 LSEKAVLPKR-----GSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV-GAGVIDAD 160 (219)
Q Consensus 87 l~~~a~lP~r-----~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v-~~GVIDsg 160 (219)
..+.+.+|-+ .+++||||||+++++++|+|+++.+|+||+++++|+||+++|++||||+.| |+.+ ..|+||+|
T Consensus 271 ~~~aa~~Pf~~~F~PKtaGDAGyDLyA~EDvvI~PGEt~lIpTGIaIeIP~G~~glI~pRSGLAlK-GILV~~~GVIDSD 349 (418)
T PHA03124 271 DCPAALFPFHDIFAPKEAEDAGYDIRAPEDCTILPGGSTRIILPQKLACGKFRAAFILGRSSMNLK-GLLVDPEHVQDDD 349 (418)
T ss_pred CCcccccchhhcCCCCCCccccccCccCCCeEECCCCeEEEECCEEEecCCCeEEEEEeccccccC-CeEeCCCceECCC
Confidence 3344555533 667899999999999999999999999999999999999999999999999 6644 58999999
Q ss_pred CccceEEEEEeCCCCcEEEeCCCEEEEEEEee--------cccccEEEeccCCC-----CcCCCCCCCCcCC
Q 027765 161 YRGPVGVILFNHSDVDFVVKVGDRIAQLIIEK--------IVTPDVLEVENLDS-----TVRGEGGFGSTGV 219 (219)
Q Consensus 161 YrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~--------~~~p~~~ev~~l~~-----t~RG~gGFGSTG~ 219 (219)
| +++.|+|+++++++|++|||||||||.+ +..++|++|++|++ |+||+|||||||+
T Consensus 350 Y---I~ViL~Nlsdep~tI~kGDRIAQLVIlP~r~e~l~~v~~~e~~eVeEL~e~~~~~TeRGeGGFGSTG~ 418 (418)
T PHA03124 350 W---ISFNITNIRDAAAFFHAGDRIAQLIALEDKLEFLGEPDALPWKIVNSVQDEKKNLSSRGDGGFGSSGK 418 (418)
T ss_pred c---EEEEEEECCCCCEEECCCCEEEEEEEeecccccccceeecceEEeeeccccCCCcccccCCCCCCCCC
Confidence 9 8999999999999999999999999998 67788999999987 9999999999995
No 12
>PHA03123 dUTPase; Provisional
Probab=100.00 E-value=8.6e-34 Score=260.78 Aligned_cols=211 Identities=23% Similarity=0.262 Sum_probs=154.9
Q ss_pred ceeeeeccCcceee-----eeeeeecchhhhccC--CCccccchhHHHhhCccccCCCCCCcCCCCC-CCcccccCCccc
Q 027765 4 GIFRATNWGRLEIA-----GFPIYKRSLEIASSQ--NPIRHQSLKLVFKMAPAVQQNGSPEVKEPSP-KIPKLHQNGVEN 75 (219)
Q Consensus 4 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 75 (219)
|+++|+-|-+.+.. |..||-.-..-+.+. +-.-.-||||.|++-.++++++|++.+|++. +++.--.+.+.+
T Consensus 131 G~i~avl~~~~~~t~ipp~~l~i~L~lvkL~~~~~l~~~~~~~ldp~f~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~~ 210 (402)
T PHA03123 131 GRICALLYYKKGVTIILPGDLMIYLFPVKLAQSRLLNKNVDKHLDPIFAEHMCQPLSNSPSGKEKIAIKEFADINNAIKQ 210 (402)
T ss_pred ceEEEEEEecCcceeeCCCceEEEEEeeeeecceeeccccccccCchhhhhhhhhhccCCccccccccccccCCcccccC
Confidence 56666666555544 444443222222111 0111268999999999999999999999887 544222121111
Q ss_pred cCC---------cceEEEEE-ccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCc--eEEeCC-CceEEEEcCC
Q 027765 76 DNI---------GSLLRVKK-LSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDL--SIAIPE-GTYARIAPRS 142 (219)
Q Consensus 76 ~~~---------~~~l~Vkk-l~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi--~v~iP~-g~~g~I~pRS 142 (219)
-.. .-++.|.. ......+|+|.. ||||||+++++++|+||++.+|+||+ .+.++. ||+++|++||
T Consensus 211 G~~~~~~~~~y~~th~~i~l~~~~~~F~pKR~g--DAGyDL~ApeDvtI~PGEt~lV~TGI~~~i~i~~pGy~a~I~pRS 288 (402)
T PHA03123 211 GEPCHKDHAEYTETHIDIPLIFKHTIFKPKRQE--DAGYDICAPFEITLKANEFIKITLPFIQDLDLNHPNIDAYIFGRS 288 (402)
T ss_pred CccccccccccccccccceeeecccccccCCCC--CccccccCCCCcEECCCCEEEEeCCccceeccCCCCEEEEEEccc
Confidence 100 01234443 344588999976 99999999999999999999999998 455654 9999999999
Q ss_pred CccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeeccc---------------------------
Q 027765 143 GLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVT--------------------------- 195 (219)
Q Consensus 143 Sla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~--------------------------- 195 (219)
||++| ||.+.+|+||+||+| ++.++|++++++.|++|||||||||++...
T Consensus 289 GLAkK-GLiV~~GvIDsGy~G--~V~L~N~~~epi~IkkGDRIAQLVfm~~~~~~~~~~~~~~~~~~~fP~~~~~~~~~~ 365 (402)
T PHA03123 289 SKNRI-GIIVCPTAWIAGEHC--EFYIFNATGDDIIIKPGDKIAQVLLIDHNNQSIHIHHDIINNFEAFPSAIFGKCGIE 365 (402)
T ss_pred ccccC-CeEeCCceEcCCCcc--EEEEEECCCCCeEeCCCCEEEEEEEEEcccccCCCCCCcccccCCCCCCCCCcccCC
Confidence 99954 999999999999998 689999999999999999999999987522
Q ss_pred --------ccEEEeccCC----CCcCCCCCCCCcCC
Q 027765 196 --------PDVLEVENLD----STVRGEGGFGSTGV 219 (219)
Q Consensus 196 --------p~~~ev~~l~----~t~RG~gGFGSTG~ 219 (219)
|.|....+|+ .|+||.|||||||+
T Consensus 366 ~~~~p~~~P~w~fT~~fD~~AppS~Rg~~GFGSTg~ 401 (402)
T PHA03123 366 GLNSPDVYPKWHFTKMFDLIAPPSDRGNKGFGSTDK 401 (402)
T ss_pred cccCCCCCcceEEeecccccCCcccccCCCCCCCCC
Confidence 2366666554 68999999999996
No 13
>PHA03126 dUTPase; Provisional
Probab=99.97 E-value=4.4e-30 Score=232.20 Aligned_cols=125 Identities=25% Similarity=0.345 Sum_probs=110.5
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeC-CCceEEEEcCCCccccccccccceEEcCCCccceEEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIP-EGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVI 168 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP-~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~ 168 (219)
....|+|. +||||||+++++++|+|+++++|+||+++.+| +||+++|++||||+.| ||.+.+|+||+|+ +|++.
T Consensus 168 ~~f~PKR~--gDAGyDL~A~edvvI~Pge~~lV~TGIai~ip~~g~~~~I~pRSGLA~K-GL~V~~g~id~Ge--eI~V~ 242 (326)
T PHA03126 168 DYFAPKRV--EDAGYDISAPTDATIEPDESHFVDLPIVFASSNPAVTPCIFGRSSMNRR-GLIVLPTRWVAGR--TCCFF 242 (326)
T ss_pred hccCCCCC--CccccCCcCCCCcEECCCCEEEEEcCeEEEcCCCCeEEEEeCccccccC-CeEecCcceecCC--eEEEE
Confidence 46788887 59999999999999999999999999999998 5999999999999988 8888899998773 79999
Q ss_pred EEeCCCCcEEEeCCCEEEEEEEeeccc-----------------------------ccEEEeccCC----CCcCCCCCCC
Q 027765 169 LFNHSDVDFVVKVGDRIAQLIIEKIVT-----------------------------PDVLEVENLD----STVRGEGGFG 215 (219)
Q Consensus 169 L~N~s~~~v~I~~GdRIAQLV~~~~~~-----------------------------p~~~ev~~l~----~t~RG~gGFG 215 (219)
|+|+++++++|++|||||||||++... +.|..+.+++ .|+||+||||
T Consensus 243 L~N~g~e~~~I~kGDRIAQLVIm~~~~~~~~p~~~~~~~~f~~~~~~~~~~~~~~p~~w~ft~~fd~eap~S~Rg~~GFG 322 (326)
T PHA03126 243 ILNVNKYPVSITKGQRVAQLLLTEDIDDALIPTTVNYDTPFPTYSPTGATKAPQSPVLWKFTTDFDREAPSSLRADGGFG 322 (326)
T ss_pred EEeCCCCCEEECCCCEEEEEEEcccchhhcCCCccCCCCcccccCCCccccCCCCCcceEEEeeccccCCcccccCCCCC
Confidence 999999999999999999999987411 2566666664 6999999999
Q ss_pred CcCC
Q 027765 216 STGV 219 (219)
Q Consensus 216 STG~ 219 (219)
|||.
T Consensus 323 STG~ 326 (326)
T PHA03126 323 STGL 326 (326)
T ss_pred CCCC
Confidence 9995
No 14
>PHA03130 dUTPase; Provisional
Probab=99.96 E-value=2e-29 Score=229.41 Aligned_cols=125 Identities=29% Similarity=0.451 Sum_probs=109.7
Q ss_pred CCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCC-CceE-EEEcCCCccccccccccceEEcCCCccce-
Q 027765 89 EKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPE-GTYA-RIAPRSGLAWKHSMDVGAGVIDADYRGPV- 165 (219)
Q Consensus 89 ~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~-g~~g-~I~pRSSla~K~gL~v~~GVIDsgYrGEI- 165 (219)
+.+.+|+|+ +||||||+++++++|+|+++++|+||+++.+|+ ++++ +|++||||+.| ||.+.+|+||+ ||+
T Consensus 203 ~~a~lPkRA--gDAGyDL~A~edVvI~PGet~lV~TGLaIeIP~~G~~g~~I~PRSGLA~K-GI~V~pG~id~---GEI~ 276 (368)
T PHA03130 203 APAFLPKRA--EDAGIDIVVHKRVEVPAGGTVVIQPSLRVLLAAGGPEAYYVLGRSSLNAR-GVLVTPTRWLP---GRQC 276 (368)
T ss_pred CCCCCCccC--CccCccccCCCCeEECCCCEEEEcCCeEEEcCCCCceEEEEeCccchhhC-CeeecccEEcc---CCEE
Confidence 458999999 499999999999999999999999999999985 8888 99999999998 88888888874 888
Q ss_pred EEEEEeCCCCcEEEeCCCEEEEEEEeecc----------------------------------cccEEEeccCC----CC
Q 027765 166 GVILFNHSDVDFVVKVGDRIAQLIIEKIV----------------------------------TPDVLEVENLD----ST 207 (219)
Q Consensus 166 ~v~L~N~s~~~v~I~~GdRIAQLV~~~~~----------------------------------~p~~~ev~~l~----~t 207 (219)
+++|+|+++++++|++|||||||||..-. .|.|....+|+ .|
T Consensus 277 ~ViL~N~g~ep~tIekGDRIAQLVI~~~~~l~wiP~~~~~~~~~f~~y~~~~~~~~~~~~~~~~p~w~ft~~fd~eAp~S 356 (368)
T PHA03130 277 AFSVHNITGAPVTLEAGSKVAQLLVAGSDALPWVPPDNVPGDGALRAYPRGVSPARATPAPPALPCLVFTAEFDAEAPPS 356 (368)
T ss_pred EEEEEECCCCCEEECCCCEEEEEEEeecccCceeCCCCCCCCCccccCcCCCCCCCCCCCCCCCceeeeeccccccCCcc
Confidence 59999999999999999999999996531 13466666774 68
Q ss_pred cCCCCCCCCcCC
Q 027765 208 VRGEGGFGSTGV 219 (219)
Q Consensus 208 ~RG~gGFGSTG~ 219 (219)
+||+|||||||.
T Consensus 357 ~R~~~GFGSTGi 368 (368)
T PHA03130 357 ERGTGGFGSTGI 368 (368)
T ss_pred cccCCCCCCCCC
Confidence 999999999995
No 15
>PHA03127 dUTPase; Provisional
Probab=99.96 E-value=3.1e-29 Score=227.44 Aligned_cols=122 Identities=25% Similarity=0.346 Sum_probs=105.9
Q ss_pred CCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEe-CCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEe
Q 027765 93 LPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAI-PEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFN 171 (219)
Q Consensus 93 lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~i-P~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N 171 (219)
.|+|. +||||||+++++++|+|+++.+|++++.+.. +.+++++|++||||+.| ||.+..|+||+|| ++++.|+|
T Consensus 168 ~Pkr~--gdAGyDL~A~edvvI~Pge~~~V~lpv~~~~~~~~~~~~I~pRSGLA~K-GIiV~~gvID~G~--ei~V~L~N 242 (322)
T PHA03127 168 APKRD--EDAGYDIAMPYTAVLAPGENLHVRLPVAYAAGAHAAAPYVFGRSSLNLR-GIVVLPTAWPPGE--PCRFVIRN 242 (322)
T ss_pred CCCCC--CCccccCcCCCCeEECCCCEEEEECCCcccCCCccceEEEEccCCcccC-CEEecCccCcCCC--eEEEEEEe
Confidence 35554 6999999999999999999999999986542 24457899999999999 9988899999887 88999999
Q ss_pred CCCCcEEEeCCCEEEEEEEee---------------c-------------ccccEEEeccCC----CCcCCCCCCCCcCC
Q 027765 172 HSDVDFVVKVGDRIAQLIIEK---------------I-------------VTPDVLEVENLD----STVRGEGGFGSTGV 219 (219)
Q Consensus 172 ~s~~~v~I~~GdRIAQLV~~~---------------~-------------~~p~~~ev~~l~----~t~RG~gGFGSTG~ 219 (219)
+++++++|++|||||||||.+ + ..+.|..+++|+ .|+||+|||||||.
T Consensus 243 ~~~e~~~I~kGDRIAQLVf~~~~~~~ip~~~~~~~~f~~~~~~~~~~~~~~~~~w~~t~~~~~~ap~S~Rg~~GFGSTg~ 322 (322)
T PHA03127 243 VTQEPVVAAAGQRVAQLLLLEEPLEWLPTELNDREPFPTTPRAAPPAPMAHRLRWRFVADFAAVAPSSARGDRGFGSTGL 322 (322)
T ss_pred CCCCCEEECCCCEEEEEEEccccccccCCcCCCCCccccccccCCCCCCCCCCcEEEEehhcccCCcccccCCCCCCCCC
Confidence 999999999999999999982 1 125788888887 79999999999995
No 16
>PHA03129 dUTPase; Provisional
Probab=99.95 E-value=5.5e-28 Score=225.14 Aligned_cols=125 Identities=26% Similarity=0.361 Sum_probs=108.8
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEE-eCCCceEEEEcCCCccccccccccceEEcCCCccceEEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIA-IPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVI 168 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~-iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~ 168 (219)
+..+|+| ++||||||+++++++|+|++++.|.+++.+. +|+|++|+|++||||+.| ||.+..|.||.| +++++.
T Consensus 278 ~~f~PKR--~gdAGyDL~A~edvvI~Pge~~~Iai~i~~~~iP~G~~g~I~pRSGLA~K-GIiVl~g~id~G--eeI~V~ 352 (436)
T PHA03129 278 ETFNPKR--LEDAGYDIPAPRDIELEPLSSTTIKIQQRYNCKDSSVIPCIFGRSSMNLR-GLIVLPSRWLPN--SWLTLT 352 (436)
T ss_pred hhcCCCC--CCccccCccCCCCeEECCCCEEEEEEecccccCCCCeEEEEECccccccC-CeEeccccEeCC--CeEEEE
Confidence 3667888 5699999999999999999999998887665 699999999999999998 888888999876 469999
Q ss_pred EEeCCCCcEEEeCCCEEEEEEEeecc-----------------------------cccEEEeccCC----CCcCCCCCCC
Q 027765 169 LFNHSDVDFVVKVGDRIAQLIIEKIV-----------------------------TPDVLEVENLD----STVRGEGGFG 215 (219)
Q Consensus 169 L~N~s~~~v~I~~GdRIAQLV~~~~~-----------------------------~p~~~ev~~l~----~t~RG~gGFG 215 (219)
|+|+++++++|++|||||||||++.. .|.|..+.+|+ .|+||+||||
T Consensus 353 L~N~g~e~v~I~kGDRIAQLVIi~~~~~~~ip~~~~~~~~fP~~~~~~~p~~~~~~p~w~ft~~fd~eap~S~Rg~~GFG 432 (436)
T PHA03129 353 ICNLTEKTVFIKAGDRIAQLLLVDQDAATLIPPENNTTDCFPTVGKCSRPYVTYGEPVWRETLHFDTEAMTSERQEGGFG 432 (436)
T ss_pred EEeCCCCCeEeCCCCEEEEEEEeecccccccCCCCCCCCCCCCCCCCcCCcCCCCCcceEEEehhcccCCcccccCCCCC
Confidence 99999999999999999999998641 03677777664 6999999999
Q ss_pred CcCC
Q 027765 216 STGV 219 (219)
Q Consensus 216 STG~ 219 (219)
|||+
T Consensus 433 STG~ 436 (436)
T PHA03129 433 STGI 436 (436)
T ss_pred CCCC
Confidence 9995
No 17
>PHA03131 dUTPase; Provisional
Probab=99.94 E-value=6e-27 Score=210.55 Aligned_cols=98 Identities=24% Similarity=0.280 Sum_probs=91.7
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceE-EeCCCceEEEEcCCCccccccccccceEEcCCCccceEEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSI-AIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVI 168 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v-~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~ 168 (219)
...+|+| ++||||||+++++++|+|+++++|+||+.+ ++|+||+++|++|||+++| ||.+.++.|| +||+++.
T Consensus 123 ~l~~P~~--~~dAG~DL~a~~~~~I~P~~~~~V~tg~~~~~~p~~~~~~I~~RSsla~k-Gl~v~~~~~~---~Gei~v~ 196 (286)
T PHA03131 123 LLNPPQY--PDDAGFDVSLPQDLVIFPTTTFTFTLSLCCPPISPHFVPVIFGRSGLASK-GLTVKPTKWR---RSGLQLK 196 (286)
T ss_pred ccCCCCc--cccCCccEEeCCCEEECCCCEEEEeCCeEEecCCCCEEEEEEcCchhhcC-CeEEcCCeEE---CCEEEEE
Confidence 4668998 459999999999999999999999999995 9999999999999999988 8988888888 8999999
Q ss_pred EEeCCCCcEEEeCCCEEEEEEEeec
Q 027765 169 LFNHSDVDFVVKVGDRIAQLIIEKI 193 (219)
Q Consensus 169 L~N~s~~~v~I~~GdRIAQLV~~~~ 193 (219)
++|++++++.|++|||||||||.+.
T Consensus 197 l~N~~~~~v~I~~G~RIAQlVf~~~ 221 (286)
T PHA03131 197 LYNYTDETIFLPAGSRICQVVFMHK 221 (286)
T ss_pred EEECCCCCEEECCCCEEEEEEEEec
Confidence 9999999999999999999999875
No 18
>cd07557 trimeric_dUTPase Trimeric dUTP diphosphatases. Trimeric dUTP diphosphatases, or dUTPases, are the most common family of dUTPase, found in bacteria, eukaryotes, and archaea. They catalyze the hydrolysis of the dUTP-Mg complex (dUTP-Mg) into dUMP and pyrophosphate. This reaction is crucial for the preservation of chromosomal integrity as it removes dUTP and therefore reduces the cellular dUTP/dTTP ratio, and prevents dUTP from being incorporated into DNA. It also provides dUMP as the precursor for dTTP synthesis via the thymidylate synthase pathway. dUTPases are homotrimeric, except some monomeric viral dUTPases, which have been shown to mimic a trimer. Active sites are located at the subunit interface.
Probab=99.94 E-value=9.4e-27 Score=174.41 Aligned_cols=88 Identities=43% Similarity=0.689 Sum_probs=85.2
Q ss_pred cceeeeCCCC---CeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccc-eEEcCCCccceEEEEEeCCCCcE
Q 027765 102 AGYDLSSAAE---TKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGA-GVIDADYRGPVGVILFNHSDVDF 177 (219)
Q Consensus 102 AGyDL~a~ed---~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~-GVIDsgYrGEI~v~L~N~s~~~v 177 (219)
|||||+++++ ++|+|+++++|+|++++.+|+++++++++|||+++ +|+.+.. |+||+||+|++++.++|+++.++
T Consensus 1 ag~Dl~~~~~~~~~~i~P~~~~~v~t~~~i~~p~~~~~~i~~RSs~~~-~Gi~v~~~g~iD~gy~G~l~v~l~N~~~~~~ 79 (92)
T cd07557 1 AGYDLRLGEDFEGIVLPPGETVLVPTGEAIELPEGYVGLVFPRSSLAR-KGITVHNAGVIDPGYRGEITLELYNLGPEPV 79 (92)
T ss_pred CcEEEEcCCcCCCEEEcCCCEEEEEEeEEEEcCCCeEEEEEcCchhhc-CCEEecCCcccCCCCcceEEEEEEECCCCCE
Confidence 7999999999 99999999999999999999999999999999997 5998887 99999999999999999999999
Q ss_pred EEeCCCEEEEEEE
Q 027765 178 VVKVGDRIAQLII 190 (219)
Q Consensus 178 ~I~~GdRIAQLV~ 190 (219)
.|++|+|||||+|
T Consensus 80 ~i~~G~~iaQlvf 92 (92)
T cd07557 80 VIKKGDRIAQLVF 92 (92)
T ss_pred EECCCCEEEEEEC
Confidence 9999999999986
No 19
>PHA03131 dUTPase; Provisional
Probab=99.92 E-value=3.3e-24 Score=192.82 Aligned_cols=126 Identities=19% Similarity=0.235 Sum_probs=114.8
Q ss_pred CcceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEE
Q 027765 78 IGSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVI 157 (219)
Q Consensus 78 ~~~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVI 157 (219)
+.+.++.++...++..|.+.. .+++||++.++++|+||++.+|+||+++++|+||++++++++ .|+ |.+.+|+|
T Consensus 4 ~~~~v~y~~~~~~f~~~~~~~--~~~l~l~n~~~i~I~Pge~~lV~TGi~i~iP~g~~~~i~gla---~K~-i~~~~GvI 77 (286)
T PHA03131 4 QRPEVYYAFEPSKFLITSPAE--ESRLTLVNKTPILVRPGEPTVVPLGLYIRRPPGFAFILWGST---SKN-VTCHTGLI 77 (286)
T ss_pred cCceeEEEEcCCCcEEecccc--cCCeEEeCCCCEEECCCCEEEEeCCeEEEcCCCEEEEEeecc---cCc-EEccceeE
Confidence 357889999999999998744 899999999999999999999999999999999999999764 576 88899999
Q ss_pred cCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcC
Q 027765 158 DADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVR 209 (219)
Q Consensus 158 DsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~R 209 (219)
|+||||||++.++|+++++++|++|||+|||+++++.+|.+.+++++..-.|
T Consensus 78 DsdYrGEI~V~l~N~~~~~~~I~~Gd~~~qlv~~~~~~p~~~~v~~l~~P~~ 129 (286)
T PHA03131 78 DPGYRGELKLILLNKTKYNVTLRPGELKVSLLAFTYATPILTDDSLLNPPQY 129 (286)
T ss_pred CCCCCcceEEEEEeCCCCCEEECCCCEEEEEEEEEeecCceEeccccCCCCc
Confidence 9999999999999999999999999999999999999999999988764433
No 20
>PHA01707 dut 2'-deoxyuridine 5'-triphosphatase
Probab=99.88 E-value=2e-22 Score=167.09 Aligned_cols=86 Identities=26% Similarity=0.396 Sum_probs=80.4
Q ss_pred CCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEE
Q 027765 109 AAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQL 188 (219)
Q Consensus 109 ~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQL 188 (219)
.+.++|+||+.++++|++++.||++++|++.+|||++++ ||.+++|+|||||+|++++.++| +..++.|++|+|||||
T Consensus 52 ~~~~~l~Pg~~~l~~T~E~i~lP~~~~~~i~~RSslaR~-Gl~v~~~~iD~Gy~G~i~lel~n-~~~pi~i~~G~rIaQl 129 (158)
T PHA01707 52 GDEFIIYPHEHVLLTTKEYIKLPNDIIAFCNLRSTFARK-GLLIPPTIVDAGFEGQLTIELVG-SSIPVKLKSGERFLHL 129 (158)
T ss_pred CCcEEECCCCEEEEEEeEEEECCCCEEEEEECcchhhhC-CEEecceeECCCCCCEEEEEEEe-CCCCEEECCCCEEEEE
Confidence 356899999999999999999999999999999999976 99988999999999999999999 6799999999999999
Q ss_pred EEeecccc
Q 027765 189 IIEKIVTP 196 (219)
Q Consensus 189 V~~~~~~p 196 (219)
+|+++..+
T Consensus 130 vf~~~~~~ 137 (158)
T PHA01707 130 IFARTLTP 137 (158)
T ss_pred EEEEcccc
Confidence 99998754
No 21
>TIGR02274 dCTP_deam deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation.
Probab=99.88 E-value=5.3e-22 Score=166.99 Aligned_cols=90 Identities=29% Similarity=0.425 Sum_probs=82.2
Q ss_pred CCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc--cceEEcCCCccceEEEEEeCCCCcEEEeCCCEEE
Q 027765 109 AAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIA 186 (219)
Q Consensus 109 ~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v--~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIA 186 (219)
.++++|+||+.++++|++++.+|++++|++++|||+++ .||.+ .+|+|||||+|++++.+.|+++.++.|++|+|||
T Consensus 68 ~~~~~l~Pg~~~lv~t~e~i~lP~~~~~~i~~RSslar-~Gl~v~~~~g~iD~Gy~G~i~l~l~N~~~~~i~i~~g~rIa 146 (179)
T TIGR02274 68 GEEFVIPPGEFALATTLEYVKLPDDVVGFLEGRSSLAR-LGLFIHVTAGRIDPGFEGNITLELFNAGKLPVKLRPGMRIA 146 (179)
T ss_pred CCcEEECCCCEEEEEeceEEEcCCCeEEEEEecccccc-CCEEecCCCCcCCcCCCCEEEEEEEeCCCCCEEECCCCEEE
Confidence 35689999999999999999999999999999999995 58865 4699999999999999999999999999999999
Q ss_pred EEEEeecccccEE
Q 027765 187 QLIIEKIVTPDVL 199 (219)
Q Consensus 187 QLV~~~~~~p~~~ 199 (219)
||+|+++..+...
T Consensus 147 Qlvf~~~~~~~~~ 159 (179)
T TIGR02274 147 QLVFERLSSPAER 159 (179)
T ss_pred EEEEEECcccccc
Confidence 9999999876433
No 22
>PRK00416 dcd deoxycytidine triphosphate deaminase; Reviewed
Probab=99.84 E-value=2.9e-20 Score=156.35 Aligned_cols=87 Identities=22% Similarity=0.274 Sum_probs=81.3
Q ss_pred CCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEE
Q 027765 109 AAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQL 188 (219)
Q Consensus 109 ~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQL 188 (219)
.+.++|+||+.++++|++++.+|++++|++.+|||+++ .||.+.+++|||||+|++++.++|++..++.|++|+|||||
T Consensus 68 ~~~~~l~pg~~~lv~t~e~i~lP~~~~~~i~~RSslar-~Gl~v~~~~iD~Gy~G~i~l~l~n~~~~~i~I~~g~rIaQl 146 (177)
T PRK00416 68 GEVFILPPGEFALARTLEYFKLPDDVVGILEGRSSLAR-LGLIVHVTAIDPGWEGHITLEFSNSGPLPVKLYPGEGIGQL 146 (177)
T ss_pred CCeEEECCCCEEEEEeeeEEECCCCeEEEEEeCchhhc-CCEEecCceECcCCcCEEEEEEEeCCCCCEEECCCCEEEEE
Confidence 34589999999999999999999999999999999995 59988889999999999999999999999999999999999
Q ss_pred EEeecccc
Q 027765 189 IIEKIVTP 196 (219)
Q Consensus 189 V~~~~~~p 196 (219)
+|+++..+
T Consensus 147 vf~~~~~~ 154 (177)
T PRK00416 147 LFFELSEP 154 (177)
T ss_pred EEEECCCc
Confidence 99998654
No 23
>COG0717 Dcd Deoxycytidine deaminase [Nucleotide transport and metabolism]
Probab=99.78 E-value=4e-18 Score=144.81 Aligned_cols=105 Identities=25% Similarity=0.286 Sum_probs=89.7
Q ss_pred CCCCCcccCCCccceeeeCCCC--CeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAE--TKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGV 167 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed--~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v 167 (219)
..+-|+.....+--.+....++ ++|+|++.+++.|.+.++||+++++++.+|||++ |.|+.+++|+|||||+|.+++
T Consensus 51 ~~iD~~~~~~~~~~~~~~~~e~~~~il~P~~~~L~~t~E~i~iP~~v~~~~~gRSSla-R~G~~~~~~~~DpGf~G~itl 129 (183)
T COG0717 51 GVIDPDNPDEEDPLVEEEELEDGEFILPPGEFYLAVTLEYVEIPEDVAAFCTGRSSLA-RLGLIVHVGVIDPGFEGRITL 129 (183)
T ss_pred cEEcCCccccccccceeeeccCCcEEECCCcEEEEEEEEEEEcCcceEEEEEccCchh-hCcEEecCccCCCCcCceEEE
Confidence 3455544333333444444554 8999999999999999999999999999999998 459999999999999999999
Q ss_pred EEEeCCCCcEEEeCCCEEEEEEEeeccc
Q 027765 168 ILFNHSDVDFVVKVGDRIAQLIIEKIVT 195 (219)
Q Consensus 168 ~L~N~s~~~v~I~~GdRIAQLV~~~~~~ 195 (219)
.+.|+++.++.|++|+|||||||.++..
T Consensus 130 e~~n~~~~p~~L~~g~rI~QLvF~~l~~ 157 (183)
T COG0717 130 ELVNSGPLPIRLYPGERIAQLVFLELDS 157 (183)
T ss_pred EEEecCCCCeEEcCCCEEEEEEEEEccc
Confidence 9999999999999999999999999874
No 24
>PHA03129 dUTPase; Provisional
Probab=99.76 E-value=1.5e-18 Score=162.25 Aligned_cols=78 Identities=24% Similarity=0.454 Sum_probs=73.2
Q ss_pred CeEEEecCceEEeCCCceEEEE------cCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEe
Q 027765 118 GKALVPTDLSIAIPEGTYARIA------PRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIE 191 (219)
Q Consensus 118 e~~lV~Tgi~v~iP~g~~g~I~------pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~ 191 (219)
...+|+||+++++|+||+++|. |||+ +.| ||.+..|+||+||||||+++|+|+ ++++|++||||||||+.
T Consensus 76 ~~~lV~TGlaiaiP~Gy~~~V~~~~~~~PRSG-a~k-gI~v~NGvIDSdYRGEIkviL~N~--~~~tI~~GdRIAQLVi~ 151 (436)
T PHA03129 76 QICLLDLGVRVAVPQNYVVVLAKLTDPDPTSR-GIP-VIRVANGVIDSGYRGTIRAVLFYE--KSCTIPKNGLAIRLALV 151 (436)
T ss_pred EEEEECCceEEecCCCEEEEEEecCCCCCCcc-CcC-ceEeccccccCCCCcEEEEEEEcC--CCEEeCCCCEEEEEEEE
Confidence 3579999999999999999999 9999 998 998877999999999999999998 89999999999999999
Q ss_pred ecccccEE
Q 027765 192 KIVTPDVL 199 (219)
Q Consensus 192 ~~~~p~~~ 199 (219)
++.+++++
T Consensus 152 ~v~~~~~~ 159 (436)
T PHA03129 152 KLASPNIN 159 (436)
T ss_pred Eeeeccee
Confidence 99987764
No 25
>PRK02253 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=99.76 E-value=3.7e-18 Score=142.55 Aligned_cols=85 Identities=25% Similarity=0.303 Sum_probs=71.4
Q ss_pred CCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEE
Q 027765 110 AETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLI 189 (219)
Q Consensus 110 ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV 189 (219)
+.++|+||+.. +.|.+++.+|+++++++.+|||++ |.|+.+++++||+||+|.+.+.+.|....++.|++|+||||||
T Consensus 70 ~~~~l~pg~~l-~~t~E~v~ip~~~~~~~~~RSsl~-R~Gl~v~~~~iD~Gy~G~~~i~l~~~n~~~~~i~~G~rIaQlv 147 (167)
T PRK02253 70 GWIRLEPGIYK-VRYNEVVNIPEDHVGFAYPRSSLL-RNGCTLETAVWDAGYEGRGEGLLVVHNPHGIRLERGARIAQLV 147 (167)
T ss_pred CeEEECCCCEE-EEeeeEEECCCCcEEEEECCcHHh-hCCeEcCCccCCcCCCCCCEEEEEEeCCCCEEECCCCEEEEEE
Confidence 45789999865 567899999999999999999996 6699888999999999855444444435799999999999999
Q ss_pred Eeecccc
Q 027765 190 IEKIVTP 196 (219)
Q Consensus 190 ~~~~~~p 196 (219)
|.++..+
T Consensus 148 f~~~~~~ 154 (167)
T PRK02253 148 FATLDHE 154 (167)
T ss_pred EEECccC
Confidence 9988764
No 26
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional
Probab=99.51 E-value=4.3e-14 Score=131.23 Aligned_cols=83 Identities=20% Similarity=0.282 Sum_probs=75.4
Q ss_pred CCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc--------cceEEcCCCccceEEEEEeCCCCcEEEe
Q 027765 109 AAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV--------GAGVIDADYRGPVGVILFNHSDVDFVVK 180 (219)
Q Consensus 109 ~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v--------~~GVIDsgYrGEI~v~L~N~s~~~v~I~ 180 (219)
.+.++|+||+.++++|.+++.+|++++|++.+|||++ |.||.+ ..++||+||+|.+.+.++| +..++.++
T Consensus 79 ~eg~vL~Pg~~yL~~t~E~v~LP~dl~a~~~~RSSlg-RlGl~i~~~a~~~~~~~~iDpGy~G~itLEi~~-~~~pI~l~ 156 (365)
T PRK07559 79 TDGAVLETGCVYIVPLLESLALPADLSASANPKSSTG-RLDVFTRVITDGAQEFDKIPAGYHGPLYAEISP-RTFPILVR 156 (365)
T ss_pred CCceEEcCCeEEEEEEEEEEeCCcceEEEEeccchhh-hCCeEEEEecccccccCccCCCccceEEEEEec-CCccEEEe
Confidence 4668999999999999999999999999999999998 458854 3489999999999999998 77899999
Q ss_pred CCCEEEEEEEeec
Q 027765 181 VGDRIAQLIIEKI 193 (219)
Q Consensus 181 ~GdRIAQLV~~~~ 193 (219)
+|+|||||+|.+-
T Consensus 157 pG~RI~QlvF~~~ 169 (365)
T PRK07559 157 TGSRLSQIRFRRG 169 (365)
T ss_pred CCCEEEEEEEEcC
Confidence 9999999999874
No 27
>PHA03127 dUTPase; Provisional
Probab=99.48 E-value=1.3e-13 Score=125.72 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=71.4
Q ss_pred eEEEecCceEEeCCCceEEEEc-CCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeec--cc
Q 027765 119 KALVPTDLSIAIPEGTYARIAP-RSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKI--VT 195 (219)
Q Consensus 119 ~~lV~Tgi~v~iP~g~~g~I~p-RSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~--~~ 195 (219)
+.+|+||+++++|+||+++|.+ |||++.|+|+.+..|+||+||||||+++|+|++. ..+|.+|+-=.++.+.++ ..
T Consensus 63 ~~lV~tGl~i~~P~Gy~~~v~p~RSGla~k~gi~~~nG~IDsgYRGei~vil~N~~~-~~~~~pg~l~l~l~l~~~~~~~ 141 (322)
T PHA03127 63 SRLVNLGLRAAAPGGYAILMSQMCSGQTPSRPPAVAVGIVDSGYRGILRAIVWAPPC-IETIPEAGLALRLTLARLAKTT 141 (322)
T ss_pred EEEecCceEEecCCCEEEEEeeccCCccccCCcccccCCCCCCCCceEEEEEEeCCC-CeeecCCceEEEEEEeeeeccC
Confidence 4689999999999999999999 9999999999998999999999999999999988 999999976666666554 34
Q ss_pred ccEEEec
Q 027765 196 PDVLEVE 202 (219)
Q Consensus 196 p~~~ev~ 202 (219)
|.+..+.
T Consensus 142 p~l~~~~ 148 (322)
T PHA03127 142 PRLAACD 148 (322)
T ss_pred CccccCC
Confidence 5554443
No 28
>PHA03128 dUTPase; Provisional
Probab=99.30 E-value=1e-11 Score=114.23 Aligned_cols=95 Identities=13% Similarity=0.124 Sum_probs=82.4
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccce-EEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPV-GVI 168 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI-~v~ 168 (219)
+...|.| .|||||+.++++.|+|+.+..+.....-...+.+.++|++||+|+.| ||.+-+.+|-++ -+ .|.
T Consensus 202 nL~PP~y----~agFDL~l~~~l~I~P~~t~tv~fda~p~~~p~~~aLI~GrsgLA~k-GLlV~PtiW~~~---tlp~lk 273 (376)
T PHA03128 202 NIPPPNE----HYFFGLRTRQTIIIQPGHTQTVYFDAAYVHAPGICALIVGTRQFSQS-DLIIRPTIWLPG---TVATVT 273 (376)
T ss_pred cCCCCCc----ccceEEecCCcEEECCCCcEEEEEeccCCCCCcceeEEEcCchhhhC-CcEEeeeEeCCC---CcceEE
Confidence 3445554 39999999999999999999999884444578999999999999987 898888888754 47 899
Q ss_pred EEeCCCCcEEEeCCCEEEEEEEee
Q 027765 169 LFNHSDVDFVVKVGDRIAQLIIEK 192 (219)
Q Consensus 169 L~N~s~~~v~I~~GdRIAQLV~~~ 192 (219)
++|.+++.+.|++|+||||+||..
T Consensus 274 i~N~T~~Tv~i~agsrIAQVVFth 297 (376)
T PHA03128 274 VVNTSSTTVCISPTTTVAKVVFTT 297 (376)
T ss_pred EEeCCCceEEecCCCEEEEEEEee
Confidence 999999999999999999999975
No 29
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional
Probab=99.22 E-value=4.1e-11 Score=111.47 Aligned_cols=83 Identities=17% Similarity=0.293 Sum_probs=73.8
Q ss_pred CCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccc-cc-cceEEcCCCc--------cceEEEEEeCCCCcEEE
Q 027765 110 AETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSM-DV-GAGVIDADYR--------GPVGVILFNHSDVDFVV 179 (219)
Q Consensus 110 ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL-~v-~~GVIDsgYr--------GEI~v~L~N~s~~~v~I 179 (219)
+.++|.|++.+++.|-+++.+|++++|++.+|||- .|. .+ .+|+|||||. |.+.+.+.| ++.++.|
T Consensus 246 ~~~iL~Pgef~L~~t~E~v~lP~d~~a~~~~~~s~---~G~~~vh~Ag~~DpGf~~~~~~~~~g~~tLEi~~-~~~P~~L 321 (365)
T PRK07559 246 GELILDPGEFYILASREAVHVPPDYAAEMVPFDPL---VGEFRVHYAGFFDPGFGHAEAGGTGSRAVLEVRS-HEVPFIL 321 (365)
T ss_pred CcEEECCCCEEEEEEEEEEeCChhHeEEEeccCcc---eeeeeccccceECCCCCcccccCCCceEEEEEEe-CCCcEEe
Confidence 56899999999999999999999999999977762 233 35 6899999999 999999998 6789999
Q ss_pred eCCCEEEEEEEeecccc
Q 027765 180 KVGDRIAQLIIEKIVTP 196 (219)
Q Consensus 180 ~~GdRIAQLV~~~~~~p 196 (219)
++|+|||||+|+++..+
T Consensus 322 ~~G~ri~qlvf~~~~~~ 338 (365)
T PRK07559 322 EHGQIVGRLVYERMLER 338 (365)
T ss_pred cCCCEEEEEEEEEcCCC
Confidence 99999999999998754
No 30
>PHA03128 dUTPase; Provisional
Probab=99.15 E-value=5.2e-10 Score=103.13 Aligned_cols=127 Identities=10% Similarity=0.038 Sum_probs=108.8
Q ss_pred cceEEEEEccCCCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEc
Q 027765 79 GSLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVID 158 (219)
Q Consensus 79 ~~~l~Vkkl~~~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVID 158 (219)
.+.+..|....++..+ . ....+-|+....+.+.|++...+++|+++.+|+||+|+++..++- + .+...+|+||
T Consensus 86 ~p~V~Ykf~~S~Fi~~--q--~~srL~LtNk~iI~V~p~~~~Iv~LGI~L~iPeG~fgi~L~~~s~--~-~v~ChtgLId 158 (376)
T PHA03128 86 RPKVPYKWIPSSFIVK--Q--CHTQLAFYNKHIIWLSRERKTPTSLGISLYIPEGFFGITFYKCLD--A-QFVCMPELIE 158 (376)
T ss_pred cceeEEEeeCceEEec--c--CcceEEEEcceeEEEeCCCceEEcceeEEecCCCeEEEEEecCCC--C-CeEecccccC
Confidence 4688888888888662 2 257888999999999999999999999999999999999988875 4 5777899999
Q ss_pred CCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCCCCcCCCCCC
Q 027765 159 ADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGF 214 (219)
Q Consensus 159 sgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~~t~RG~gGF 214 (219)
+||+| +++.+.|.++.++.|.+|+-=.-|.++++..|+.-++..|..-.. ..||
T Consensus 159 pGy~g-ikLiL~N~Ts~~v~L~PGeLevsI~aFpy~vPePwq~~nL~PP~y-~agF 212 (376)
T PHA03128 159 PGLQN-PQMDVVNLNYTFQAIFPGTIEGDIGVFPCFCPEPWQLMNIPPPNE-HYFF 212 (376)
T ss_pred CCCcc-eEEEEEeCCCccceecCCceEEEEEEEEccCCCccccccCCCCCc-ccce
Confidence 99999 999999999999999999999999999999999877777763322 2455
No 31
>PHA03125 dUTPase; Provisional
Probab=99.07 E-value=6.2e-10 Score=102.42 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=81.2
Q ss_pred CCCCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccce-EEE
Q 027765 90 KAVLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPV-GVI 168 (219)
Q Consensus 90 ~a~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI-~v~ 168 (219)
+...|+|. .|||+.++++.|+|+.++.++.-.....|+...++|+|||+|+.| ||.+-+.+|-++ -+ .|.
T Consensus 247 nL~PP~y~-----~FDL~l~r~l~I~P~~~~~~~f~~a~~CPp~~~aLI~GrsgLA~k-GLlV~PtiW~~~---tlp~lk 317 (376)
T PHA03125 247 NLSPPEFA-----KFHLKTNREFIVKPNSYTIQNFDAMYVCADELKALMIPSKEILKL-GLLIETYIWNKD---TIPSIK 317 (376)
T ss_pred CCCCCCcc-----ceeEeeCccEEECCCccceeeeEEEeeCCCcceeEEEcCchhhhC-CcEEeeeEeCCC---CcceEE
Confidence 34556653 399999999999999777777766777899999999999999987 898888888754 47 899
Q ss_pred EEeCCCCcEEEeCCCEEEEEEEeec
Q 027765 169 LFNHSDVDFVVKVGDRIAQLIIEKI 193 (219)
Q Consensus 169 L~N~s~~~v~I~~GdRIAQLV~~~~ 193 (219)
++|.+++.+.+++|+||||+||..-
T Consensus 318 i~N~T~~Tv~i~AgsrIAQVVFth~ 342 (376)
T PHA03125 318 IFNSTRKTIYIPTGICIARIIFTCG 342 (376)
T ss_pred EEecCCceEEecCCCEEEEEEEEeC
Confidence 9999999999999999999999753
No 32
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=98.95 E-value=2.2e-09 Score=98.70 Aligned_cols=82 Identities=22% Similarity=0.303 Sum_probs=62.2
Q ss_pred CCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccc--------eEEcCCCccceEEEEEeCCCCcEEEeC
Q 027765 110 AETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGA--------GVIDADYRGPVGVILFNHSDVDFVVKV 181 (219)
Q Consensus 110 ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~--------GVIDsgYrGEI~v~L~N~s~~~v~I~~ 181 (219)
...+|+||+.++++|-+++.+|.+..+..-+|||++ |.+|.+.. .-||+||.|.|.+.+.|. .-++.+++
T Consensus 79 ~GaVLE~GcVYlvpl~EsL~LP~di~A~anpKSStG-RLdlftRvitd~~~~Fd~I~~Gy~GpLylEIspr-tfpI~vrp 156 (364)
T PF06559_consen 79 DGAVLEPGCVYLVPLMESLALPADISARANPKSSTG-RLDLFTRVITDGGAEFDRIPPGYSGPLYLEISPR-TFPILVRP 156 (364)
T ss_dssp S-EEE-TT-EEEEEEEEEEE--TTEEEEEEE-HHHH-HTTEEEEEEETT-SSTTEE-TT-EEEEEEEEEES-SS-EEE-T
T ss_pred CCceecCCeEEEEEeEeeecCCcCcEEEEcCccccc-ccceEEEEeccCccccCccCCCCcccEEEEEcCC-eeeEEEcC
Confidence 456999999999999999999999999999999998 45765431 359999999999999994 78999999
Q ss_pred CCEEEEEEEeec
Q 027765 182 GDRIAQLIIEKI 193 (219)
Q Consensus 182 GdRIAQLV~~~~ 193 (219)
|+|+.||.|.+-
T Consensus 157 G~rL~QirFr~g 168 (364)
T PF06559_consen 157 GMRLSQIRFRRG 168 (364)
T ss_dssp T-EEEEEEEEES
T ss_pred CCceeeEEEecC
Confidence 999999999873
No 33
>PHA03125 dUTPase; Provisional
Probab=98.79 E-value=9.2e-08 Score=88.27 Aligned_cols=117 Identities=20% Similarity=0.245 Sum_probs=97.3
Q ss_pred CcceEEEEEccCC-C--CCCcccCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccc
Q 027765 78 IGSLLRVKKLSEK-A--VLPKRGSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGA 154 (219)
Q Consensus 78 ~~~~l~Vkkl~~~-a--~lP~r~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~ 154 (219)
..+.+.|....+. . ..| .+.+-|.....+.+.|++...+++|+++.+|+||+|++.++++ . -.-...+
T Consensus 130 ~~~~~~~Y~f~~skF~V~s~------~srL~LtNk~iI~V~p~r~~IvpLGI~L~iPeG~fgIL~gkss-~--v~cvcht 200 (376)
T PHA03125 130 EEPSILVSHHRNSKMDVFMD------TNKITLVNRELIWVPHDQVRIVKLDISLNIPDGFFGVITGHSN-D--VFCECVT 200 (376)
T ss_pred CCCceEEEEecCceEEEEcC------CceEEEEcceeEEEeCCCceEEeceEEEecCCCeEEEEECCCC-C--Cceeecc
Confidence 3455666555543 1 123 4788888888999999999999999999999999999999998 2 1233479
Q ss_pred eEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccccEEEeccCC
Q 027765 155 GVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTPDVLEVENLD 205 (219)
Q Consensus 155 GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p~~~ev~~l~ 205 (219)
|+||+| |++++.+.|.++.++.|.+|+-=.-|.++++..|+.-++..|.
T Consensus 201 gLIdpG--geikLiL~N~Ts~~v~L~PGeLeVsI~aFpy~vPEPwq~~nL~ 249 (376)
T PHA03125 201 EIITDE--TDISVFLMNLSEHSLMLLPGDVEFSINFLPCYIPEPWEMINLS 249 (376)
T ss_pred eeECCC--CcEEEEEEeCCCCcceecCCceEEEEEEEEccCCCcccccCCC
Confidence 999999 9999999999999999999999999999999999877776665
No 34
>PHA03126 dUTPase; Provisional
Probab=98.61 E-value=2.6e-07 Score=84.67 Aligned_cols=81 Identities=22% Similarity=0.335 Sum_probs=68.5
Q ss_pred eEEEecCceEEeCCCceEEEEcCCCc--------cccccc---------cccceEEcCCCccceEEEEEeCCCCcEEEeC
Q 027765 119 KALVPTDLSIAIPEGTYARIAPRSGL--------AWKHSM---------DVGAGVIDADYRGPVGVILFNHSDVDFVVKV 181 (219)
Q Consensus 119 ~~lV~Tgi~v~iP~g~~g~I~pRSSl--------a~K~gL---------~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~ 181 (219)
..++++|+++..|+||+.++..-+++ ..+ .+ ..+.|+||+||||+|+++ .|..+...+|.+
T Consensus 53 ~~~~~lGv~~~~~~gyA~~L~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~GlID~GYrG~lk~i-~~~~~~~~~i~~ 130 (326)
T PHA03126 53 SVLTDVGVRVACSSGYAIVLTQISGLLPVEPEPGNFS-NVTFPGNSAKYYTAYGIVDSGYRGVVKAV-QFAPGVNTSVPP 130 (326)
T ss_pred EEEecceeEEeCCCCeEEEEEeccCCCcccccccccc-ccccccccccceeeeceECCCcceEEEeE-eccCCCceeecC
Confidence 35899999999999999999988864 012 23 447999999999999999 688888899999
Q ss_pred CCEEEEEEEeecccccEEEe
Q 027765 182 GDRIAQLIIEKIVTPDVLEV 201 (219)
Q Consensus 182 GdRIAQLV~~~~~~p~~~ev 201 (219)
|+-=.+|+.+++.++.+...
T Consensus 131 g~L~v~L~~~~~~t~~~~~~ 150 (326)
T PHA03126 131 GQMSLGLVLVKLATETIHVT 150 (326)
T ss_pred CceEEEEEEEEeecceeecc
Confidence 99999999999999887633
No 35
>PHA03123 dUTPase; Provisional
Probab=97.44 E-value=0.00064 Score=64.00 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=57.8
Q ss_pred eEEEecCceEEeCCCceEEEE-cCCCc-cccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeecccc
Q 027765 119 KALVPTDLSIAIPEGTYARIA-PRSGL-AWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVTP 196 (219)
Q Consensus 119 ~~lV~Tgi~v~iP~g~~g~I~-pRSSl-a~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~p 196 (219)
..++.+|++++.|.||+-++. -+++- ..+.-+.+..||||+||||.|++.++-. +.-..|.+|.--.+|.+.++.+.
T Consensus 85 ~~~ldlgvr~A~p~~Yavll~q~~~~~~~~~~~~~iAnGviDsGYRG~i~avl~~~-~~~t~ipp~~l~i~L~lvkL~~~ 163 (402)
T PHA03123 85 IQQLDLGVKAAPPNEYALLLIQCIDSALADEDDFFIANGVIDAGYRGRICALLYYK-KGVTIILPGDLMIYLFPVKLAQS 163 (402)
T ss_pred EEEeccceeeecCCCeEEEEEeecCCCCCCCcceEEEeeeeccCccceEEEEEEec-CcceeeCCCceEEEEEeeeeecc
Confidence 467889999999999997665 33332 2232244569999999999999999852 33344999999999999887754
Q ss_pred c
Q 027765 197 D 197 (219)
Q Consensus 197 ~ 197 (219)
.
T Consensus 164 ~ 164 (402)
T PHA03123 164 R 164 (402)
T ss_pred e
Confidence 3
No 36
>PHA03130 dUTPase; Provisional
Probab=97.32 E-value=0.00082 Score=62.53 Aligned_cols=73 Identities=26% Similarity=0.406 Sum_probs=58.3
Q ss_pred eEEEecCceEEeCCCceEEEE-cCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEEEEEeeccc
Q 027765 119 KALVPTDLSIAIPEGTYARIA-PRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQLIIEKIVT 195 (219)
Q Consensus 119 ~~lV~Tgi~v~iP~g~~g~I~-pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQLV~~~~~~ 195 (219)
..+|++++++.+|.||+..|. +-+|-+ +-.+..|+||+||||-++..++- ....-.+.+|+--.+|.|.++..
T Consensus 59 ~~~v~~~lr~a~p~~~~~~~~~~~~~~~---~~~~~~g~idsgyrg~~~av~~a-p~~~~~~~pg~l~~~l~~~~~~~ 132 (368)
T PHA03130 59 VGRVPLDLRVAMPTDFCAVVHAPPTAGA---PYRVALGLIDSGYRGTVQAVVLA-PGETRRFAPGELRVDLTFLRVSG 132 (368)
T ss_pred EEEecCceEEecCCCeEEEEeccccCCC---CceeEEEEeccCccceEEEEEEc-CCcccccCCCceEeeeEEEEeec
Confidence 468999999999999999998 444422 11235799999999999987764 35677889999999999999864
No 37
>PF04797 Herpes_ORF11: Herpesvirus dUTPase protein; InterPro: IPR006882 This family of proteins are found in Herpesvirus. This family includes proteins called ORF10 and ORF11 amongst others.
Probab=96.52 E-value=0.017 Score=54.19 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=67.6
Q ss_pred ceeeeCCCCCeEeCCCeEEEecCceEEeCCC-c-e-EEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEE
Q 027765 103 GYDLSSAAETKVPARGKALVPTDLSIAIPEG-T-Y-ARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVV 179 (219)
Q Consensus 103 GyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g-~-~-g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I 179 (219)
-.=+|...+++|+|+++..|..+..+..+.. . . .+|.+-+.. ..+.+.+.+|-|+ ..+.+.++|.++.+++|
T Consensus 264 v~~iY~~~~~~IpP~es~~v~~~~~y~~~~~~~~~~~~I~~~~~~---~~~~i~p~~W~P~--~~~~ltv~N~s~~p~~I 338 (379)
T PF04797_consen 264 VPPIYPGPEKTIPPGESTKVKYNNMYEQGNPSKITAFFICGLNDN---SDFVISPCEWLPG--SPLQLTVHNPSNFPITI 338 (379)
T ss_pred eeeEeCCCceEECCCCEEEEEEccEEEecCCCccceEEEEcCCCC---ceEEEeeeEECCC--CceEEEEEcCCCceEEe
Confidence 6778888999999999999999888876542 2 2 345554443 2456678888875 47899999999999999
Q ss_pred eCCCEEEEEEEee
Q 027765 180 KVGDRIAQLIIEK 192 (219)
Q Consensus 180 ~~GdRIAQLV~~~ 192 (219)
+.|+++||.+|..
T Consensus 339 ~~gt~la~Aif~~ 351 (379)
T PF04797_consen 339 SRGTPLAQAIFIY 351 (379)
T ss_pred cCCCEEEEEEEEe
Confidence 9999999999985
No 38
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=96.43 E-value=0.013 Score=54.55 Aligned_cols=83 Identities=20% Similarity=0.359 Sum_probs=55.3
Q ss_pred CCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccc-cceEEcCCCc-------cc-eEEEEEeCCCCcEEEeC
Q 027765 111 ETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDV-GAGVIDADYR-------GP-VGVILFNHSDVDFVVKV 181 (219)
Q Consensus 111 d~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v-~~GVIDsgYr-------GE-I~v~L~N~s~~~v~I~~ 181 (219)
.++|.|++.+++-..+.+.||++|++-+.|--.+. .-..+ .+|+-||||- |. -.+.+..| +.||.++.
T Consensus 247 ~liLdP~eFYil~Sre~v~iPp~~aAEM~p~~~~v--GEfRvHYAGFFDPGFG~~~agg~Gsr~VLEVR~h-evPF~leh 323 (364)
T PF06559_consen 247 ELILDPGEFYILASREAVHIPPDYAAEMVPFDPLV--GEFRVHYAGFFDPGFGHAEAGGAGSRAVLEVRSH-EVPFILEH 323 (364)
T ss_dssp EEEE-TT--EEEEEEEEE-B-TTEEEEEEE-GGGT--TTEEEES--EE-TTTT-S-TTSS-EEEEEEEEES-SS-EEEET
T ss_pred eEEECCcceEEEeecccccCChhHhhhcccccccc--CceEEeeccccCCCCCcccccCCCceEEEEEecC-CCCeeeeC
Confidence 37899999999999999999999999998866553 12334 5999999983 11 23566654 78999999
Q ss_pred CCEEEEEEEeecccc
Q 027765 182 GDRIAQLIIEKIVTP 196 (219)
Q Consensus 182 GdRIAQLV~~~~~~p 196 (219)
|+.|++||++++...
T Consensus 324 GQ~vgrLvyE~m~~~ 338 (364)
T PF06559_consen 324 GQIVGRLVYERMAER 338 (364)
T ss_dssp T-EEEEEEEEEBSS-
T ss_pred CcEEEEEEehhhccC
Confidence 999999999998753
No 39
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp., such as Human cytomegalovirus (HHV-5) (Human herpesvirus 5). As viruses are reliant upon their host cell to serve as proper environments for their replication, many have evolved mechanisms to alter intracellular conditions to suit their own needs. HHV-5 induces quiescent cells to enter the cell cycle and then arrests them in late G(1), before they enter the S phase, a cell cycle compartment that is presumably favourable for viral replication. The protein product of the HHV-5 UL82 gene, pp71, can accelerate the movement of cells through the G(1) phase of the cell cycle. This activity would help infected cells reach the late G(1) arrest point sooner and thus may stimulate the infectious cycle. pp71 also induces DNA synthesis in quiescent cells, but a pp71 mutant protein that is unable to induce quiescent cells to enter the cell cycle still retains the ability to accelerate the G(1) phase. Thus, the mechanism through which pp71 accelerates G(1) cell cycle progression appears to be distinct from the one that it employs to induce quiescent cells to exit G(0) and subsequently enter the S phase [].; GO: 0009405 pathogenesis; PDB: 3BW9_C.
Probab=96.15 E-value=0.0014 Score=61.20 Aligned_cols=87 Identities=9% Similarity=0.135 Sum_probs=0.0
Q ss_pred CCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEE
Q 027765 99 PLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFV 178 (219)
Q Consensus 99 ~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~ 178 (219)
..+.||-+.++.++.++||++..+.+...++-...|.|+++|+.- .|+.++.|.|.+.= .|.+.+.|.++ ++.
T Consensus 256 h~~NGf~V~~Pr~i~l~pg~~~~v~id~~feS~~~~~~lF~Pk~i----pGlsis~~~w~~~~--~l~i~i~a~~~-~v~ 328 (348)
T PF05784_consen 256 HPRNGFTVLCPRNIHLKPGKTSHVTIDNAFESDQTYIGLFFPKDI----PGLSISCGPWMERQ--PLFIEIRATGK-NVE 328 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEECCcceecCCCCeEEEEEeeeEecCCceEEEEecccC----CCceeeeeccCCCc--eEEEEEEeccc-cee
Confidence 458999999999999999999999998888887789999999974 48999999998743 68899999866 999
Q ss_pred EeCCCEEEEEEEee
Q 027765 179 VKVGDRIAQLIIEK 192 (219)
Q Consensus 179 I~~GdRIAQLV~~~ 192 (219)
|+.++.++.+-|++
T Consensus 329 i~~~q~LG~lhFf~ 342 (348)
T PF05784_consen 329 IRYGQPLGSLHFFP 342 (348)
T ss_dssp --------------
T ss_pred ecccceeeeEEEee
Confidence 99999999999876
No 40
>PHA03365 hypothetical protein; Provisional
Probab=88.07 E-value=5.2 Score=38.48 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=54.5
Q ss_pred CCCeEeCCCeEEEecCceEEe--CCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEeCCCEEEE
Q 027765 110 AETKVPARGKALVPTDLSIAI--PEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVKVGDRIAQ 187 (219)
Q Consensus 110 ed~vI~Pge~~lV~Tgi~v~i--P~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~~GdRIAQ 187 (219)
-.+.|+|++.+.|.-+-+... ....-++|..-++. . ...+..-.|-|+ ....+.+.|.+..+++|..|+.+||
T Consensus 292 p~V~IP~~~~t~V~YnN~Y~~~~~~~iTAiI~n~~~~--~-~f~i~~ceW~p~--~ta~I~V~N~S~fp~~i~~Gt~lg~ 366 (419)
T PHA03365 292 PPVIIPPNCSTVVEYNNTYYSPLSLKITAIIVNHETN--P-DFYIYDCEWKPG--QTAKLMVTNTSNFPITISTGTHLGQ 366 (419)
T ss_pred CcEEeCCCceEEEEeCCEEEeccCCceEEEEEcCCCC--C-cEEEEeeecCCC--CeeEEEEEecCCCcEEeeCCCEeeE
Confidence 457788888888887766644 45566788764442 1 233333333332 2467899999999999999999999
Q ss_pred EEEee
Q 027765 188 LIIEK 192 (219)
Q Consensus 188 LV~~~ 192 (219)
.+|+-
T Consensus 367 A~Fi~ 371 (419)
T PHA03365 367 AIFIL 371 (419)
T ss_pred EEEEE
Confidence 99964
No 41
>PF06284 Cytomega_UL84: Cytomegalovirus UL84 protein; InterPro: IPR010436 This family consists of several Cytomegalovirus UL84 proteins. The open reading frame UL84 of human cytomegalovirus encodes a multifunctional regulatory protein which is required for viral DNA replication and binds with high affinity to the immediate-early transactivator IE2-p86 [].
Probab=80.03 E-value=9.3 Score=37.15 Aligned_cols=84 Identities=7% Similarity=0.021 Sum_probs=57.9
Q ss_pred CccceeeeCCCCCeEeCCCeEEEecCceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEE
Q 027765 100 LAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVV 179 (219)
Q Consensus 100 ~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I 179 (219)
++.|+|++++.|+.++ ..+.+.. +=..---|.|++.|.-- -|+.+.+|+|-|--+=||.+...| ...+.|
T Consensus 372 ~~~~LdV~~PyDl~lk--~s~~LRi--YRrfYGp~LGLFvP~~r----~~l~mpVtiWlPRTWLEi~l~~~~--~~g~tl 441 (530)
T PF06284_consen 372 GEGGLDVRLPYDLPLK--TSYTLRI--YRRFYGPFLGLFVPKNR----QGLKMPVTIWLPRTWLEITLVGSN--EHGVTL 441 (530)
T ss_pred CCCceEEecccceecC--Chhheeh--hhhhcccceeEecccCc----cceeeeEEeeeccceEEEEEEeec--cccccc
Confidence 5789999999999773 2222221 11222346778888764 367778999999654445554444 568999
Q ss_pred eCCCEEEEEEEeec
Q 027765 180 KVGDRIAQLIIEKI 193 (219)
Q Consensus 180 ~~GdRIAQLV~~~~ 193 (219)
++|+-+.||.|..-
T Consensus 442 ~R~~vLG~LYFiss 455 (530)
T PF06284_consen 442 PRDDVLGRLYFISS 455 (530)
T ss_pred ccCceeeEEEEecc
Confidence 99999999999763
No 42
>PHA03124 dUTPase; Provisional
Probab=58.02 E-value=43 Score=32.24 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=52.4
Q ss_pred CCCeEeCCC---eEEEecCceEEeCCCceEEEEcCCCcccccc--ccccceEEcCCCccceEEEE--EeCCC--------
Q 027765 110 AETKVPARG---KALVPTDLSIAIPEGTYARIAPRSGLAWKHS--MDVGAGVIDADYRGPVGVIL--FNHSD-------- 174 (219)
Q Consensus 110 ed~vI~Pge---~~lV~Tgi~v~iP~g~~g~I~pRSSla~K~g--L~v~~GVIDsgYrGEI~v~L--~N~s~-------- 174 (219)
|++.-+|+. ...+..-++..+|+||--.|-. .+..|- -.+.+|++|+||.|-+.+.+ .|.+.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (418)
T PHA03124 33 EAIIAEPRADSPVLKIDSAIRTALPPGYGIVISD---TAEGHAAAWEIIPGLVDADYTGLLGILLVLTDDGGNTLAGGEA 109 (418)
T ss_pred hhhhccccCCCceEeehhhhhhcCCCcceEEEec---ccccchhhhhhccceecCCccceeeEEEEEecCCCcccccccc
Confidence 334445542 3456777888899998776644 222221 23459999999999876554 55432
Q ss_pred --CcEEEeCCCEEEEEEEeecc
Q 027765 175 --VDFVVKVGDRIAQLIIEKIV 194 (219)
Q Consensus 175 --~~v~I~~GdRIAQLV~~~~~ 194 (219)
.-+.+.+|.--|.|-+.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~ 131 (418)
T PHA03124 110 GDGIVIFPPGGVHARLNVIKLA 131 (418)
T ss_pred CCceEEeCCCceEEEEEEEEec
Confidence 24677788877887776654
No 43
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp., such as Human cytomegalovirus (HHV-5) (Human herpesvirus 5). As viruses are reliant upon their host cell to serve as proper environments for their replication, many have evolved mechanisms to alter intracellular conditions to suit their own needs. HHV-5 induces quiescent cells to enter the cell cycle and then arrests them in late G(1), before they enter the S phase, a cell cycle compartment that is presumably favourable for viral replication. The protein product of the HHV-5 UL82 gene, pp71, can accelerate the movement of cells through the G(1) phase of the cell cycle. This activity would help infected cells reach the late G(1) arrest point sooner and thus may stimulate the infectious cycle. pp71 also induces DNA synthesis in quiescent cells, but a pp71 mutant protein that is unable to induce quiescent cells to enter the cell cycle still retains the ability to accelerate the G(1) phase. Thus, the mechanism through which pp71 accelerates G(1) cell cycle progression appears to be distinct from the one that it employs to induce quiescent cells to exit G(0) and subsequently enter the S phase [].; GO: 0009405 pathogenesis; PDB: 3BW9_C.
Probab=53.49 E-value=4.4 Score=38.04 Aligned_cols=75 Identities=20% Similarity=0.223 Sum_probs=0.0
Q ss_pred eeCCCCCeEeCCCeEEEecCceEEeCCCceEEE---EcCCCccc--cccccccceEEcCCCccceEEEEEeCCCCcEEEe
Q 027765 106 LSSAAETKVPARGKALVPTDLSIAIPEGTYARI---APRSGLAW--KHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVK 180 (219)
Q Consensus 106 L~a~ed~vI~Pge~~lV~Tgi~v~iP~g~~g~I---~pRSSla~--K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~ 180 (219)
|+...+..+.|+|++.+.||+.+..+.-.+-++ .+-|.-.. +..|.+...++|..=.+.|.+.+.|.++.++.-.
T Consensus 13 l~~~~~~~~~p~E~k~l~tgl~V~v~~psVicv~q~~~~~~~~~~~~~~L~vkft~~~~~~~~nl~v~V~N~s~r~l~~~ 92 (348)
T PF05784_consen 13 LFSTQDTPFKPHETKILKTGLSVKVSQPSVICVTQETPSSQPPHRDDTDLQVKFTVFDGQEIDNLTVDVHNPSDRPLSPS 92 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCCccCCCcEEEEecCceEEeCCCeEEEEEeccCCCCCcccccccceeeEEEeccccccceEEEEECCCCCcCCCC
Confidence 445667889999999999999999876433333 33332221 1135555667777545789999999987764433
No 44
>PF09160 FimH_man-bind: FimH, mannose binding; InterPro: IPR015243 This domain adopts a secondary structure consisting of a beta sandwich, with nine strands arranged in two sheets in a Greek key topology. It is predominantly found in bacterial mannose-specific adhesins, and is capable of binding to D-mannose []. ; PDB: 3MCY_C 1KLF_D 1QUN_L 1KIU_L 3RFZ_D 2VCO_B 1TR7_A 1UWF_A 3JWN_N.
Probab=48.16 E-value=20 Score=29.88 Aligned_cols=95 Identities=20% Similarity=0.203 Sum_probs=50.4
Q ss_pred cceeeeCCCCCeEeCCCeEEEecCceEEe----CC-CceEEEEcCCCcccccccccc-ceE-------------------
Q 027765 102 AGYDLSSAAETKVPARGKALVPTDLSIAI----PE-GTYARIAPRSGLAWKHSMDVG-AGV------------------- 156 (219)
Q Consensus 102 AGyDL~a~ed~vI~Pge~~lV~Tgi~v~i----P~-g~~g~I~pRSSla~K~gL~v~-~GV------------------- 156 (219)
.-.|+|..-.=.|.+|+..+|.+.-.+.+ |. .+.=++..+++.+.-.-+... .++
T Consensus 13 G~anvyV~L~p~V~~gqNlVvDLS~~i~CkND~p~g~~~Dyv~l~~Gs~~~~~l~~f~g~l~~~g~~YpfPl~s~t~~~~ 92 (147)
T PF09160_consen 13 GSANVYVNLSPSVQVGQNLVVDLSQQIFCKNDDPSGQNVDYVNLTSGSAFGGVLKNFTGSLRYYGSSYPFPLNSETTVVN 92 (147)
T ss_dssp EEEEEEE---SBE-TTSEEEEEGGGTEEEE-SSTT-T--EEEEEEEEEEEHHHHHHEEEEEEETTEEEEES-SS----EE
T ss_pred cceeEEEecCCccccCccEEEEccceEEEECCCCCcceeeeEEEccCCccCchhhhccceEEEeCcCccccccCCceEEE
Confidence 34588877777789999988888765544 44 355677777655431111111 111
Q ss_pred EcCC-Ccc-ceEEEEEeCC-CCcEEEeCCCEEEEEEEeecccc
Q 027765 157 IDAD-YRG-PVGVILFNHS-DVDFVVKVGDRIAQLIIEKIVTP 196 (219)
Q Consensus 157 IDsg-YrG-EI~v~L~N~s-~~~v~I~~GdRIAQLV~~~~~~p 196 (219)
+.++ |+. .+++.|.-.+ -.-+.|++||.||+|.+.++.+.
T Consensus 93 ~~~~~~~p~p~~LYLtp~~~a~Gv~I~~G~~iAtl~~~k~~t~ 135 (147)
T PF09160_consen 93 YQSGNYQPWPIKLYLTPVSAAGGVVINKGDLIATLNMHKTNTY 135 (147)
T ss_dssp E-SSS-EE--EEEEEEESTTSSEEEE-TTSEEEEEEEEEEESS
T ss_pred ecCCCcccccEEEEEEEccCCCcEEEeCCCEEEEEEEEEeccc
Confidence 1111 111 2344443322 33589999999999999987653
No 45
>cd00235 TLP-20 Telokin-like protein-20 (TLP-20) domain; a baculovirus protein that shares some antigenic similarities to the smooth muscle protein telokin, a kinase-related protein
Probab=43.34 E-value=48 Score=26.32 Aligned_cols=27 Identities=30% Similarity=0.470 Sum_probs=23.0
Q ss_pred ccceEEEEEeCCCCcEEEeCCCEEEEEEE
Q 027765 162 RGPVGVILFNHSDVDFVVKVGDRIAQLII 190 (219)
Q Consensus 162 rGEI~v~L~N~s~~~v~I~~GdRIAQLV~ 190 (219)
++.+.++|+|. ++..+++|+.|.|++.
T Consensus 80 ~~~i~viLfn~--kp~~lkk~~~iFki~~ 106 (108)
T cd00235 80 SNGINVILFNK--KPIILKKGSCIFKIKY 106 (108)
T ss_pred CCCeEEEEEEc--cceEEEcCcEEEEEEe
Confidence 45688999994 5899999999999975
No 46
>PF04489 DUF570: Protein of unknown function (DUF570) ; InterPro: IPR007578 This proteins in this entry belong to the herpesvirus U10 family; there function is unknown.
Probab=42.61 E-value=2e+02 Score=27.95 Aligned_cols=87 Identities=17% Similarity=0.234 Sum_probs=63.2
Q ss_pred cCCCccceeeeCCCCCeEeCCCeEEEecCceEEeCCCc-eEEEEcCCCccccccccccceEEcCCCccc-eEEEEEeCCC
Q 027765 97 GSPLAAGYDLSSAAETKVPARGKALVPTDLSIAIPEGT-YARIAPRSGLAWKHSMDVGAGVIDADYRGP-VGVILFNHSD 174 (219)
Q Consensus 97 ~t~~dAGyDL~a~ed~vI~Pge~~lV~Tgi~v~iP~g~-~g~I~pRSSla~K~gL~v~~GVIDsgYrGE-I~v~L~N~s~ 174 (219)
.++...-+-++||.|+...++....|.++++..=+.+. +.+|.. +.-.+.--....+|-+ |+ |+|.|+-.+
T Consensus 340 ~ePn~~~ltVhAPYDI~F~~~~~h~V~ldIrY~~~~~r~cFLVs~---~p~e~~F~T~m~vW~~---~~PLkiTL~S~~- 412 (429)
T PF04489_consen 340 NEPNPFELTVHAPYDIHFYHSRRHTVELDIRYTQPNDRQCFLVSN---LPNEDSFHTGMTVWRP---DEPLKITLWSPS- 412 (429)
T ss_pred cCCCCceEEEeCcceEEecCCccEEEEeeeEEcccCCceEEEEec---CCCCCeeEeeeEEecC---CCceEEEEecCC-
Confidence 34556677889999999999999999999999888887 566643 3222212223445654 45 999999865
Q ss_pred CcEEEeCCCEEEEEEE
Q 027765 175 VDFVVKVGDRIAQLII 190 (219)
Q Consensus 175 ~~v~I~~GdRIAQLV~ 190 (219)
....|..|..||-|..
T Consensus 413 ~~LviPqGtPIA~Ly~ 428 (429)
T PF04489_consen 413 RNLVIPQGTPIATLYQ 428 (429)
T ss_pred CceEccCCCceeEEEe
Confidence 4789999999998754
No 47
>PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function.
Probab=38.46 E-value=38 Score=26.87 Aligned_cols=30 Identities=20% Similarity=0.247 Sum_probs=23.7
Q ss_pred CCCCeEeCCCeEEEecCceEEeCCC-ceEEEEc
Q 027765 109 AAETKVPARGKALVPTDLSIAIPEG-TYARIAP 140 (219)
Q Consensus 109 ~ed~vI~Pge~~lV~Tgi~v~iP~g-~~g~I~p 140 (219)
+..++|+|++...|+. .+.||+. |-|.+++
T Consensus 84 ~~~Vtl~~~~sk~V~~--~i~~P~~~f~G~ilG 114 (121)
T PF06030_consen 84 PKEVTLPPNESKTVTF--TIKMPKKAFDGIILG 114 (121)
T ss_pred CcEEEECCCCEEEEEE--EEEcCCCCcCCEEEe
Confidence 3458999999999996 6778975 7777765
No 48
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=35.12 E-value=27 Score=31.27 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=30.6
Q ss_pred CceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEE
Q 027765 125 DLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGV 167 (219)
Q Consensus 125 gi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v 167 (219)
++.+.|-.|-.-.+.++|+++...-+.+.+|+++|. +|++++
T Consensus 23 ~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~-~G~i~l 64 (259)
T COG4525 23 DVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS-RGSIQL 64 (259)
T ss_pred ccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc-cceEEE
Confidence 445555666666788999998554456679999998 788765
No 49
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=32.26 E-value=50 Score=29.90 Aligned_cols=64 Identities=19% Similarity=0.135 Sum_probs=41.6
Q ss_pred CceEEeCCCceEEEEcCCCccccccccccceEEcCCCccceEEEEEeCCCCcEEEe----CCCEEEEEEEeecc
Q 027765 125 DLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFVVK----VGDRIAQLIIEKIV 194 (219)
Q Consensus 125 gi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsgYrGEI~v~L~N~s~~~v~I~----~GdRIAQLV~~~~~ 194 (219)
++.+.+.+|-+.=|.+.||.+.-.-..+..|.-.+ +.|+|.+-= .+..-+ .--|.+||||....
T Consensus 25 ~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p-~~G~I~~~G-----~~~~~~~~~~~~~~~VQmVFQDp~ 92 (252)
T COG1124 25 NVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP-SSGSILLDG-----KPLAPKKRAKAFYRPVQMVFQDPY 92 (252)
T ss_pred ceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-CCceEEECC-----cccCccccchhhccceeEEecCCc
Confidence 56778888888888899998733222345787666 689886522 112111 34688999998643
No 50
>PF06088 TLP-20: Nucleopolyhedrovirus telokin-like protein-20 (TLP20); InterPro: IPR009092 The baculovirus, Autographa californica nuclear polyhedrosis virus (AcMNPV), telokin-like protein (Tlp20) lies in a region of the baculoviral genome that is expressed late in the viral replication cycle, however its function is unknown. Tlp20 was discovered using anti-telokin antibodies, telokin being the C-terminal domain of smooth-muscle myosin light-chain kinase []. Both Tlp20 and telokin display a seven-stranded antiparallel beta-barrel structure, although the 3-dimensional structures of the beta-barrels are different and there is no sequence homology between the two. Tlp20 is structurally similar to dUTPase in its fold and trimeric assembly [].; PDB: 1TUL_A.
Probab=26.94 E-value=1.1e+02 Score=26.15 Aligned_cols=28 Identities=29% Similarity=0.396 Sum_probs=19.3
Q ss_pred cceEEEEEeCCCCcEEEeCCCEEEEEEEee
Q 027765 163 GPVGVILFNHSDVDFVVKVGDRIAQLIIEK 192 (219)
Q Consensus 163 GEI~v~L~N~s~~~v~I~~GdRIAQLV~~~ 192 (219)
+.+.++|+|. +++.|++|+.|+|+++-.
T Consensus 81 ~~ln~iLfn~--k~~~lkK~~~iF~i~~~~ 108 (169)
T PF06088_consen 81 NGLNAILFNI--KPIVLKKGQCIFKIVYWN 108 (169)
T ss_dssp S--EEEEEES--S-EEE-TT-EEEEEEEE-
T ss_pred CCceEEEEEe--cceeeecCceEEEEEecC
Confidence 4578888995 499999999999999976
No 51
>PF04254 DUF432: Protein of unknown function (DUF432); InterPro: IPR007366 This is an archaeal protein of unknown function.
Probab=25.17 E-value=3.5e+02 Score=21.51 Aligned_cols=23 Identities=26% Similarity=0.118 Sum_probs=17.2
Q ss_pred EcCCCccceEEEEEeCCCCcEEEe
Q 027765 157 IDADYRGPVGVILFNHSDVDFVVK 180 (219)
Q Consensus 157 IDsgYrGEI~v~L~N~s~~~v~I~ 180 (219)
.|+. +|-+++.+.|.+++...+.
T Consensus 88 ~~~~-~av~~v~I~N~s~~~~~v~ 110 (123)
T PF04254_consen 88 SDPL-EAVTKVTIRNNSDEWVTVS 110 (123)
T ss_pred CCCe-eEEEEEEEEcCCCCeEEEE
Confidence 3444 7888899999888777665
No 52
>PLN03211 ABC transporter G-25; Provisional
Probab=23.16 E-value=2e+02 Score=29.03 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=34.8
Q ss_pred EEecCceEEeCCCceEEEEcCCCccccccccccceEEcCC-CccceEE
Q 027765 121 LVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDAD-YRGPVGV 167 (219)
Q Consensus 121 lV~Tgi~v~iP~g~~g~I~pRSSla~K~gL~v~~GVIDsg-YrGEI~v 167 (219)
.+=-++.+.+.+|-.--|.+.||-+.-.-+.+..|...++ +.|+|.+
T Consensus 82 ~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~i 129 (659)
T PLN03211 82 TILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILA 129 (659)
T ss_pred eeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEE
Confidence 3455788889999888899999987443445568887775 6888753
No 53
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=21.21 E-value=42 Score=17.95 Aligned_cols=6 Identities=67% Similarity=1.221 Sum_probs=4.8
Q ss_pred CCCCcC
Q 027765 213 GFGSTG 218 (219)
Q Consensus 213 GFGSTG 218 (219)
|||||-
T Consensus 1 GYGSTq 6 (16)
T PF00818_consen 1 GYGSTQ 6 (16)
T ss_pred CCCccc
Confidence 789984
Done!