Query 027767
Match_columns 219
No_of_seqs 136 out of 1507
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 14:52:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027767.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027767hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14116 gpmA phosphoglyceromu 100.0 2.2E-34 4.8E-39 231.9 15.0 182 2-209 9-218 (228)
2 PRK15004 alpha-ribazole phosph 100.0 3E-34 6.6E-39 226.8 14.0 175 2-209 8-185 (199)
3 PRK14119 gpmA phosphoglyceromu 100.0 5.5E-34 1.2E-38 229.7 15.5 183 2-210 9-219 (228)
4 TIGR03162 ribazole_cobC alpha- 100.0 5.9E-34 1.3E-38 221.0 14.9 170 2-205 6-177 (177)
5 PRK13463 phosphatase PhoE; Pro 100.0 5.1E-34 1.1E-38 226.2 13.7 176 2-209 10-188 (203)
6 PRK14118 gpmA phosphoglyceromu 100.0 2.3E-33 4.9E-38 225.9 14.9 182 2-209 8-217 (227)
7 KOG4754 Predicted phosphoglyce 100.0 3.5E-33 7.5E-38 214.1 14.3 190 3-207 31-224 (248)
8 PRK14117 gpmA phosphoglyceromu 100.0 4.4E-33 9.6E-38 224.6 15.3 182 2-209 9-218 (230)
9 PRK03482 phosphoglycerate muta 100.0 1.9E-32 4E-37 219.1 15.7 174 2-208 9-185 (215)
10 PRK01112 phosphoglyceromutase; 100.0 1.7E-32 3.7E-37 220.7 15.4 196 2-209 9-217 (228)
11 PRK01295 phosphoglyceromutase; 100.0 3.1E-32 6.7E-37 216.3 15.6 180 2-209 10-194 (206)
12 TIGR03848 MSMEG_4193 probable 100.0 1.8E-32 4E-37 217.5 14.3 173 2-209 7-188 (204)
13 TIGR01258 pgm_1 phosphoglycera 100.0 4.2E-32 9.1E-37 220.5 15.1 182 2-209 8-217 (245)
14 PRK13462 acid phosphatase; Pro 100.0 8.4E-32 1.8E-36 213.3 16.0 166 2-209 13-183 (203)
15 PRK14115 gpmA phosphoglyceromu 100.0 8E-32 1.7E-36 219.1 15.9 182 2-209 8-217 (247)
16 PRK14120 gpmA phosphoglyceromu 100.0 9.9E-32 2.1E-36 218.6 16.1 182 2-209 12-219 (249)
17 COG0406 phoE Broad specificity 100.0 8.9E-32 1.9E-36 214.0 15.5 178 2-210 10-190 (208)
18 PRK07238 bifunctional RNase H/ 100.0 2.8E-30 6.2E-35 222.1 14.8 174 2-208 179-355 (372)
19 PTZ00123 phosphoglycerate muta 100.0 5.4E-30 1.2E-34 207.4 14.8 171 12-208 7-204 (236)
20 KOG0235 Phosphoglycerate mutas 100.0 4.5E-29 9.7E-34 195.6 14.8 181 2-208 13-199 (214)
21 PF00300 His_Phos_1: Histidine 99.9 1.5E-28 3.2E-33 186.4 5.4 148 2-177 7-158 (158)
22 smart00855 PGAM Phosphoglycera 99.9 2.2E-27 4.8E-32 180.3 11.7 143 2-176 7-154 (155)
23 PTZ00322 6-phosphofructo-2-kin 99.9 1.2E-26 2.6E-31 212.4 15.0 195 2-209 427-626 (664)
24 COG0588 GpmA Phosphoglycerate 99.9 5.7E-26 1.2E-30 175.1 8.8 179 2-208 9-217 (230)
25 PTZ00122 phosphoglycerate muta 99.9 1.8E-23 3.9E-28 174.2 13.8 158 2-208 110-275 (299)
26 cd07067 HP_PGM_like Histidine 99.9 1.7E-22 3.8E-27 152.8 12.6 135 2-209 7-143 (153)
27 cd07040 HP Histidine phosphata 99.8 2.6E-19 5.5E-24 135.0 12.4 132 2-208 7-142 (153)
28 TIGR00249 sixA phosphohistidin 99.7 4.8E-17 1E-21 123.1 13.9 132 2-208 8-139 (152)
29 PRK10848 phosphohistidine phos 99.7 1.5E-16 3.2E-21 121.3 14.4 132 2-208 8-139 (159)
30 KOG3734 Predicted phosphoglyce 99.7 3.7E-16 8.1E-21 126.3 13.0 147 15-183 65-215 (272)
31 KOG0234 Fructose-6-phosphate 2 99.6 2.4E-15 5.1E-20 128.3 12.9 150 2-185 247-398 (438)
32 PRK06193 hypothetical protein; 99.6 3.9E-15 8.3E-20 117.3 12.4 121 2-183 50-176 (206)
33 KOG4609 Predicted phosphoglyce 99.6 1.7E-15 3.6E-20 117.1 9.3 142 19-208 113-260 (284)
34 PRK15416 lipopolysaccharide co 99.6 2.5E-14 5.4E-19 111.8 12.7 59 2-64 62-121 (201)
35 COG2062 SixA Phosphohistidine 99.6 3.7E-14 8E-19 107.3 11.7 134 2-209 9-142 (163)
36 cd07061 HP_HAP_like Histidine 97.4 0.00019 4.1E-09 58.2 4.0 50 18-67 17-74 (242)
37 PF00328 His_Phos_2: Histidine 95.3 0.013 2.8E-07 49.4 2.6 50 18-67 61-117 (347)
38 KOG3720 Lysosomal & prostatic 95.3 0.03 6.4E-07 49.2 4.9 50 18-67 69-128 (411)
39 KOG1057 Arp2/3 complex-interac 95.1 0.022 4.7E-07 52.7 3.5 49 18-66 510-571 (1018)
40 PRK10173 glucose-1-phosphatase 89.9 0.48 1E-05 41.7 4.4 52 16-67 67-129 (413)
41 PRK10172 phosphoanhydride phos 89.0 0.54 1.2E-05 41.6 4.1 52 17-68 70-132 (436)
42 PF12048 DUF3530: Protein of u 76.2 8.2 0.00018 32.6 6.0 44 144-187 174-217 (310)
43 KOG3672 Histidine acid phospha 60.8 14 0.00031 32.1 4.2 50 17-66 166-226 (487)
44 KOG2728 Uncharacterized conser 58.2 11 0.00024 30.8 3.0 36 139-174 7-42 (302)
45 PF14606 Lipase_GDSL_3: GDSL-l 56.9 12 0.00026 29.0 2.9 31 142-172 72-103 (178)
46 KOG1382 Multiple inositol poly 48.7 25 0.00054 31.3 3.8 55 13-67 126-183 (467)
47 PRK00865 glutamate racemase; P 46.6 1.4E+02 0.003 24.4 7.8 61 109-172 17-78 (261)
48 COG1136 SalX ABC-type antimicr 45.4 37 0.0008 27.4 4.1 35 145-179 176-210 (226)
49 COG1116 TauB ABC-type nitrate/ 42.9 39 0.00084 27.6 3.9 30 147-176 166-195 (248)
50 PF02450 LCAT: Lecithin:choles 41.9 32 0.0007 30.0 3.6 31 142-172 98-128 (389)
51 KOG3734 Predicted phosphoglyce 39.0 9.4 0.0002 31.6 -0.2 51 15-66 38-89 (272)
52 COG1125 OpuBA ABC-type proline 38.2 78 0.0017 26.4 4.9 63 109-172 122-196 (309)
53 cd00006 PTS_IIA_man PTS_IIA, P 33.5 50 0.0011 23.5 2.9 18 164-181 2-19 (122)
54 PF03610 EIIA-man: PTS system 33.3 37 0.00081 23.8 2.2 18 164-181 1-18 (116)
55 COG1134 TagH ABC-type polysacc 33.1 73 0.0016 26.1 4.0 29 144-173 180-208 (249)
56 PF13479 AAA_24: AAA domain 33.0 78 0.0017 24.9 4.2 36 140-175 105-140 (213)
57 TIGR03729 acc_ester putative p 32.3 99 0.0021 24.7 4.8 40 139-178 140-180 (239)
58 PRK04946 hypothetical protein; 31.8 1.9E+02 0.004 22.5 6.0 44 140-184 102-148 (181)
59 COG2893 ManX Phosphotransferas 31.3 54 0.0012 24.4 2.8 20 164-183 3-22 (143)
60 PF09370 TIM-br_sig_trns: TIM- 31.1 34 0.00075 28.2 1.9 37 139-176 190-226 (268)
61 PLN02517 phosphatidylcholine-s 29.9 67 0.0015 29.9 3.6 34 140-173 189-223 (642)
62 cd03255 ABC_MJ0796_Lo1CDE_FtsE 27.8 1E+02 0.0022 24.0 4.1 29 146-174 175-203 (218)
63 cd03229 ABC_Class3 This class 26.5 1.2E+02 0.0025 22.9 4.1 27 147-173 136-162 (178)
64 cd03293 ABC_NrtD_SsuB_transpor 26.5 1.1E+02 0.0024 23.9 4.1 27 147-173 167-193 (220)
65 PLN02449 ferrochelatase 26.5 1.7E+02 0.0037 26.5 5.6 44 17-64 155-202 (485)
66 COG3840 ThiQ ABC-type thiamine 26.4 1.2E+02 0.0025 24.2 3.9 29 145-173 163-191 (231)
67 TIGR00067 glut_race glutamate 26.3 3.5E+02 0.0077 21.9 7.8 60 109-171 10-71 (251)
68 TIGR00824 EIIA-man PTS system, 26.2 1.3E+02 0.0027 21.3 3.9 38 139-178 37-77 (116)
69 COG1122 CbiO ABC-type cobalt t 26.2 94 0.002 25.1 3.6 27 147-173 174-200 (235)
70 cd07397 MPP_DevT Myxococcus xa 25.6 77 0.0017 25.8 3.0 34 140-175 126-159 (238)
71 cd03237 ABC_RNaseL_inhibitor_d 25.6 1.2E+02 0.0025 24.6 4.1 28 147-174 151-178 (246)
72 COG1121 ZnuC ABC-type Mn/Zn tr 25.3 1E+02 0.0022 25.4 3.7 24 148-172 176-199 (254)
73 cd03222 ABC_RNaseL_inhibitor T 25.0 1.4E+02 0.0031 22.8 4.3 28 147-174 107-134 (177)
74 PRK00035 hemH ferrochelatase; 24.9 2.3E+02 0.005 23.9 6.0 31 146-176 172-203 (333)
75 cd03259 ABC_Carb_Solutes_like 24.9 1.2E+02 0.0026 23.5 4.0 28 146-173 165-192 (213)
76 cd03267 ABC_NatA_like Similar 24.5 1.3E+02 0.0029 23.9 4.2 28 146-173 188-215 (236)
77 cd03261 ABC_Org_Solvent_Resist 24.3 1.2E+02 0.0026 24.0 4.0 27 147-173 172-198 (235)
78 cd03296 ABC_CysA_sulfate_impor 24.2 1.2E+02 0.0027 24.0 4.1 27 147-173 172-198 (239)
79 TIGR01166 cbiO cobalt transpor 24.1 1.3E+02 0.0029 22.8 4.1 25 146-171 162-186 (190)
80 PRK12435 ferrochelatase; Provi 24.0 3.5E+02 0.0075 22.9 6.8 21 17-37 52-72 (311)
81 TIGR02315 ABC_phnC phosphonate 23.6 1.3E+02 0.0027 23.9 4.0 27 147-173 181-207 (243)
82 cd03256 ABC_PhnC_transporter A 23.4 1.3E+02 0.0029 23.7 4.1 27 147-173 180-206 (241)
83 TIGR02211 LolD_lipo_ex lipopro 23.3 1.4E+02 0.0029 23.3 4.1 27 147-173 177-203 (221)
84 cd03230 ABC_DR_subfamily_A Thi 23.1 1.4E+02 0.003 22.3 4.0 27 146-173 130-156 (173)
85 PRK14484 phosphotransferase ma 22.8 93 0.002 22.5 2.7 18 164-181 3-21 (124)
86 cd03258 ABC_MetN_methionine_tr 22.7 1.4E+02 0.0029 23.6 4.0 27 147-173 176-202 (233)
87 cd03257 ABC_NikE_OppD_transpor 22.7 1.4E+02 0.0029 23.4 4.0 27 147-173 181-207 (228)
88 cd04256 AAK_P5CS_ProBA AAK_P5C 22.7 1E+02 0.0022 25.7 3.3 29 146-175 32-60 (284)
89 PRK11248 tauB taurine transpor 22.6 1.4E+02 0.003 24.1 4.1 28 146-173 163-190 (255)
90 cd03301 ABC_MalK_N The N-termi 22.4 1.5E+02 0.0032 23.0 4.1 26 148-173 167-192 (213)
91 TIGR01184 ntrCD nitrate transp 22.2 1.5E+02 0.0032 23.5 4.1 27 147-173 150-176 (230)
92 cd03300 ABC_PotA_N PotA is an 22.1 1.5E+02 0.0032 23.4 4.1 27 147-173 166-192 (232)
93 COG1930 CbiN ABC-type cobalt t 22.0 1.1E+02 0.0024 20.9 2.7 29 108-141 35-63 (97)
94 PRK11629 lolD lipoprotein tran 22.0 1.5E+02 0.0033 23.4 4.1 28 147-174 181-208 (233)
95 PRK11831 putative ABC transpor 21.8 1.4E+02 0.0031 24.2 4.0 26 147-172 179-204 (269)
96 cd03295 ABC_OpuCA_Osmoprotecti 21.7 1.4E+02 0.0031 23.6 4.0 28 146-173 170-197 (242)
97 TIGR02769 nickel_nikE nickel i 21.6 1.5E+02 0.0032 24.1 4.0 28 147-174 186-213 (265)
98 cd03297 ABC_ModC_molybdenum_tr 21.5 1.5E+02 0.0034 22.9 4.0 27 147-173 167-193 (214)
99 COG4525 TauB ABC-type taurine 21.4 2.1E+02 0.0045 23.0 4.5 34 146-179 167-200 (259)
100 PRK10771 thiQ thiamine transpo 21.4 1.6E+02 0.0034 23.3 4.1 28 147-174 165-192 (232)
101 PRK13646 cbiO cobalt transport 21.4 1.5E+02 0.0033 24.4 4.1 27 147-173 181-207 (286)
102 PRK10584 putative ABC transpor 21.2 1.6E+02 0.0034 23.1 4.1 29 146-174 181-209 (228)
103 cd03225 ABC_cobalt_CbiO_domain 21.2 1.6E+02 0.0035 22.7 4.1 26 147-173 170-195 (211)
104 COG4107 PhnK ABC-type phosphon 21.2 2.6E+02 0.0057 22.0 5.0 40 140-179 180-219 (258)
105 cd03235 ABC_Metallic_Cations A 21.2 1.7E+02 0.0036 22.7 4.1 27 146-173 167-193 (213)
106 PF05990 DUF900: Alpha/beta hy 21.1 2.4E+02 0.0052 22.6 5.1 42 142-183 71-113 (233)
107 COG4586 ABC-type uncharacteriz 21.0 1.3E+02 0.0028 25.4 3.4 39 146-184 191-230 (325)
108 PF13175 AAA_15: AAA ATPase do 20.7 1.5E+02 0.0031 25.5 4.0 30 145-174 385-414 (415)
109 PF06821 Ser_hydrolase: Serine 20.7 1.5E+02 0.0031 22.6 3.6 21 161-181 53-73 (171)
110 TIGR01277 thiQ thiamine ABC tr 20.6 1.7E+02 0.0037 22.7 4.1 27 147-173 164-190 (213)
111 cd03265 ABC_DrrA DrrA is the A 20.5 1.7E+02 0.0037 22.8 4.1 27 147-173 167-193 (220)
112 cd03298 ABC_ThiQ_thiamine_tran 20.4 1.7E+02 0.0037 22.6 4.0 27 147-173 164-190 (211)
113 PRK09984 phosphonate/organopho 20.4 1.6E+02 0.0035 23.7 4.1 28 147-174 188-215 (262)
114 cd03216 ABC_Carb_Monos_I This 20.4 1.9E+02 0.0041 21.4 4.2 26 147-173 118-143 (163)
115 COG0634 Hpt Hypoxanthine-guani 20.3 1.9E+02 0.0042 22.4 4.0 33 142-174 13-48 (178)
116 cd03238 ABC_UvrA The excision 20.2 2E+02 0.0042 22.0 4.2 28 146-174 124-151 (176)
117 cd03214 ABC_Iron-Siderophores_ 20.2 1.8E+02 0.0039 21.9 4.1 29 146-174 132-160 (180)
118 TIGR02323 CP_lyasePhnK phospho 20.1 1.7E+02 0.0036 23.4 4.0 29 146-174 183-211 (253)
No 1
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.2e-34 Score=231.92 Aligned_cols=182 Identities=15% Similarity=0.102 Sum_probs=147.2
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|+.|.|||+.|++||+.+++.|+..+ .++++|||||+.||+|||+.|++..+
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~qTA~~i~~~~~------------- 73 (228)
T PRK14116 9 HGQSEWNLSNQFTGWVDVDLSEKGVEEAKKAGRLIKEAG--LEFDQAYTSVLTRAIKTLHYALEESD------------- 73 (228)
T ss_pred CCCCCCccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcC-------------
Confidence 9999999864 5889999999999999999999998633 37999999999999999999976541
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCC-----------------------CCCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWK 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~~ 136 (219)
....++.+++.|+|+ ||.|+ |++..++.+.||+..+..|..+.+ ..+.
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PRK14116 74 -----QLWIPETKTWRLNERHYGALQ---GLNKKETAEKYGDEQVHIWRRSYDVLPPLLDADDEGSAAKDRRYANLDPRI 145 (228)
T ss_pred -----cCCCCcccCcccccccchhhc---CCCHHHHHHHhhhhHHHHHhhcccccCcccccccccccccchhhhccCccC
Confidence 011467789999999 99996 999999999988642333432100 0135
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhh---cCCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~~---~~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
+|++||+.++.+|+..+++.++. .++++|+|||||++|+++++.+++.+.... ....+.||+++.|.|+.
T Consensus 146 ~pgGEs~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVsHg~vir~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 218 (228)
T PRK14116 146 IPGGENLKVTLERVIPFWEDHIAPDLLDGKNVIIAAHGNSLRALTKYIENISDEDI---MNLEMATGEPVVYDFDE 218 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCeEEEEcChHHHHHHHHHHhCCCHHHH---HhccCCCCCeEEEEECC
Confidence 78999999999999999998753 256899999999999999999998643322 23689999999999875
No 2
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=100.00 E-value=3e-34 Score=226.83 Aligned_cols=175 Identities=18% Similarity=0.104 Sum_probs=147.3
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|..|+|||+.|++||+.++..|+. .++++|||||+.||+|||+.+++..+
T Consensus 8 HG~t~~n~~~~~~G~~d~pLt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~------------- 70 (199)
T PRK15004 8 HGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLRD----VPFDLVLCSELERAQHTARLVLSDRQ------------- 70 (199)
T ss_pred CCCCccccCCcEeCCCCCCcCHHHHHHHHHHHHHHhC----CCCCEEEECchHHHHHHHHHHHhcCC-------------
Confidence 9999999853 46889999999999999999999987 37999999999999999999987652
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|+ +|.|+ |++..++...+|+. +..|..++. ...+|++||+.++.+|+..+++.+.+
T Consensus 71 --------~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~gEs~~~~~~Rv~~~l~~l~~ 137 (199)
T PRK15004 71 --------LPVHIIPELNEMFFGDWE---MRHHRDLMQEDAEN-YAAWCNDWQ-HAIPTNGEGFQAFSQRVERFIARLSA 137 (199)
T ss_pred --------CCceeChhheeCCCcccC---CCCHHHHHHHCHHH-HHHHHhChh-hcCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 578899999999 99996 99999998888864 666654322 23467899999999999999999976
Q ss_pred c-CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 160 ~-~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
. ++++|+|||||++|+++++.+++.+.... ....+.||+++.++++.
T Consensus 138 ~~~~~~iliVsHg~~i~~l~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~ 185 (199)
T PRK15004 138 FQHYQNLLIVSHQGVLSLLIARLLGMPAEAM---WHFRVEQGCWSAIDINQ 185 (199)
T ss_pred hCCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hccccCCceEEEEEecC
Confidence 5 56799999999999999999998633222 23578999999999864
No 3
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=5.5e-34 Score=229.75 Aligned_cols=183 Identities=15% Similarity=0.114 Sum_probs=146.8
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|+.|.|||+.|++||++++++|+..+ .++++|||||++||+|||+.+++..+
T Consensus 9 HGeT~~N~~~~~~G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~~TA~~i~~~~~------------- 73 (228)
T PRK14119 9 HGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENN--IAIDVAFTSLLTRALDTTHYILTESK------------- 73 (228)
T ss_pred CCCCCcccCCCccCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEeCccHHHHHHHHHHHHhcc-------------
Confidence 9999999864 5789999999999999999999998632 37999999999999999999976441
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCC-----------------------CCCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWK 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~~ 136 (219)
....++.+++.|+|+ ||.|+ |++.+++.+.||...+..|....+ ....
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~we---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 145 (228)
T PRK14119 74 -----QQWIPVYKSWRLNERHYGGLQ---GLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRM 145 (228)
T ss_pred -----cCCCCeeECCCcccccccccc---CCcHHHHHHHccHHHHHHHHcccccCCCccccccccccccccccccccccc
Confidence 012578889999999 99996 999999999998632334432211 0123
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhc---CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLFF 210 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~~~---~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~~ 210 (219)
+|++||+.++.+|+..+++.+... ++++|+|||||++|+++++.+++...... ....+.||++++|+++..
T Consensus 146 ~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 219 (228)
T PRK14119 146 MPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDI---INYEIKTGAPLVYELTDD 219 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHHHHHHHhCCCHHHH---hhcCCCCCceEEEEECCC
Confidence 578999999999999999997643 56899999999999999999998632222 235789999999998753
No 4
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=100.00 E-value=5.9e-34 Score=221.03 Aligned_cols=170 Identities=23% Similarity=0.233 Sum_probs=144.2
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCcc
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~ 81 (219)
||+|.+|.....+..|++||+.|++||+.++++|+. .++++|||||+.||+|||+.++..++
T Consensus 6 Hg~t~~n~~~~~g~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~-------------- 67 (177)
T TIGR03162 6 HGETDVNAGLCYGQTDVPLAEKGAEQAAALREKLAD----VPFDAVYSSPLSRCRELAEILAERRG-------------- 67 (177)
T ss_pred CCCCccCCCceeCCCCCCcChhHHHHHHHHHHHhcC----CCCCEEEECchHHHHHHHHHHHhhcC--------------
Confidence 999999986544788999999999999999999986 48999999999999999999987663
Q ss_pred ccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 027767 82 ATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~ 160 (219)
.++.+++.|+|+ +|.++ |++.+++.+.||. +..|..++ ..+.+|++||+.++.+|+..+++.+...
T Consensus 68 -------~~~~~~~~L~E~~~G~~~---g~~~~~~~~~~~~--~~~~~~~~-~~~~~~~gEs~~~~~~R~~~~~~~l~~~ 134 (177)
T TIGR03162 68 -------LPIIKDPRLREMDFGDWE---GRSWDEIPEAYPE--LDAWAADW-QHARPPGGESFADFYQRVSEFLEELLKA 134 (177)
T ss_pred -------CCceECCccccccCCccC---CCCHHHHHHhCHH--HHHHHhCc-ccCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 578899999999 99985 9999999988883 55565432 2356789999999999999999999876
Q ss_pred -CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEe
Q 027767 161 -QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFN 205 (219)
Q Consensus 161 -~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~ 205 (219)
++++|+|||||++|+++++.+++.+.... +...+.||+++.+
T Consensus 135 ~~~~~vlvVsHg~~i~~l~~~~~~~~~~~~---~~~~~~n~~i~~l 177 (177)
T TIGR03162 135 HEGDNVLIVTHGGVIRALLAHLLGLPLEQW---WSFDVEYGSITLI 177 (177)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCCHHHH---hccccCCeeEEeC
Confidence 57899999999999999999998633222 2368999999864
No 5
>PRK13463 phosphatase PhoE; Provisional
Probab=100.00 E-value=5.1e-34 Score=226.19 Aligned_cols=176 Identities=24% Similarity=0.255 Sum_probs=147.4
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|..|+|||+.|++||+.+++.|.. .++++|||||+.||+|||+.+....+
T Consensus 10 HG~t~~n~~~~~~G~~d~~Lt~~G~~Qa~~~~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~------------- 72 (203)
T PRK13463 10 HGETEWNVAKRMQGRKNSALTENGILQAKQLGERMKD----LSIHAIYSSPSERTLHTAELIKGERD------------- 72 (203)
T ss_pred CCCCccchhCcccCCCCCCcCHHHHHHHHHHHHHhcC----CCCCEEEECCcHHHHHHHHHHHhcCC-------------
Confidence 9999999864 47888999999999999999999987 37999999999999999999976542
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|+ +|.|+ |++..++.+.||.. +..|..++ ..+.+|++||+.++.+|+..+++.+.+
T Consensus 73 --------~~~~~~~~l~E~~~G~~e---G~~~~e~~~~~p~~-~~~~~~~~-~~~~~~~gEs~~~~~~R~~~~l~~i~~ 139 (203)
T PRK13463 73 --------IPIIADEHFYEINMGIWE---GQTIDDIERQYPDD-IQLFWNEP-HLFQSTSGENFEAVHKRVIEGMQLLLE 139 (203)
T ss_pred --------CCceECcCceeCCCCccC---CCcHHHHhhhCHHH-HHHHHhCh-hccCCCCCeEHHHHHHHHHHHHHHHHH
Confidence 678899999999 99995 99999999999974 66665443 336678999999999999999999876
Q ss_pred c-CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 160 ~-~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
. .+++|+|||||++|+++++++++.+...... ...+.||++++++|+.
T Consensus 140 ~~~~~~vlvVsHg~~ir~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~ 188 (203)
T PRK13463 140 KHKGESILIVSHAAAAKLLVGHFAGIEIENVWD--DPFMHSASLSIIEFED 188 (203)
T ss_pred hCCCCEEEEEeChHHHHHHHHHHhCCCHHHHhh--ccCccCceEEEEEEeC
Confidence 5 5679999999999999999999863322211 1246899999998853
No 6
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=2.3e-33 Score=225.92 Aligned_cols=182 Identities=15% Similarity=0.091 Sum_probs=145.3
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.||... .+|+.|.|||+.|++||+.+++.|+..+ .++++|||||+.||+|||+.|.+..+
T Consensus 8 HG~t~~n~~~~~~G~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSpl~Ra~~TA~~i~~~~~------------- 72 (227)
T PRK14118 8 HGFSEWNAKNLFTGWRDVNLTERGVEEAKAAGKKLKEAG--YEFDIAFTSVLTRAIKTCNIVLEESN------------- 72 (227)
T ss_pred cCCCccccccCcCCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEEeChHHHHHHHHHHHHhcC-------------
Confidence 9999999864 5788999999999999999999998632 37999999999999999999976441
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCC-----------------------CCCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWK 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~~ 136 (219)
....++.+++.|+|+ ||.|+ |++.+++.+.+|+..+..|....+ ....
T Consensus 73 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (227)
T PRK14118 73 -----QLWIPQVKNWRLNERHYGALQ---GLDKKATAEQYGDEQVHIWRRSYDTLPPDLDPQDPNSAHNDRRYAHLPADV 144 (227)
T ss_pred -----CCCCCeecCCccccccCcccc---CCcHHHHHHHhhHHHHHHHHhccccCCCccccccccccccchhhccCcCCC
Confidence 011467888999999 99996 999999999888532333322110 1134
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhc---CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~~~---~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
+|++||+.++.+|+..+++.+... ++++|+|||||++|+++++.+++.+.... ....+.||+++.+.++.
T Consensus 145 ~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHggvir~ll~~~l~~~~~~~---~~~~i~~~s~~~~~~~~ 217 (227)
T PRK14118 145 VPDAENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGNSLRALAKHIEGISDADI---MDLEIPTGQPLVYKLDD 217 (227)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hcccCCCCceEEEEECC
Confidence 689999999999999999987642 56899999999999999999998633222 23578999999998874
No 7
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=214.07 Aligned_cols=190 Identities=44% Similarity=0.699 Sum_probs=165.9
Q ss_pred CCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCccc
Q 027767 3 GNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTA 82 (219)
Q Consensus 3 G~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~~ 82 (219)
|+.+|+.|+...++||.||+.|++|+.+++..+...+++.+++.|++|||+||+||+...+.... ..+..++
T Consensus 31 g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~~~~--~e~g~~~------ 102 (248)
T KOG4754|consen 31 GEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFGGYL--AEDGEDP------ 102 (248)
T ss_pred cccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhccee--ccCCCcC------
Confidence 55666667777899999999999999999999998887778999999999999999999998662 2232332
Q ss_pred cccCCCCCeeecCch----hhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 027767 83 TATVNCPPIIAVELC----RERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (219)
Q Consensus 83 ~~~~~~~~~~~~~~l----~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~ 158 (219)
.++.+.|.+ ||.+|.++||.|+..+++++.||.++|+....+.++.|++...|+.++...|-+.|++++.
T Consensus 103 ------~p~~vsp~~i~~~rE~lG~hpCD~r~~v~~~~~lfp~~DFs~~~~dv~~~~~pdy~ed~e~~a~r~re~~~~l~ 176 (248)
T KOG4754|consen 103 ------APVKVSPPFIAVCRETLGDHPCDRRSSVTDLMKLFPAYDFSLCETDVDPLKKPDYREDDEESAARSREFLEWLA 176 (248)
T ss_pred ------CceeecchHHHHHHHHhCCCcccccchhHHHHhhcccccceeeccCcchhccCcchhhHHHHHHhHHHHHHHHH
Confidence 345555555 9999999999999999999999999999999988899999999999999999999999999
Q ss_pred hcCCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehH
Q 027767 159 TRQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNF 207 (219)
Q Consensus 159 ~~~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~ 207 (219)
.++.+.|.||||+++|+.+++.+...|.+.+..+. ..++||+...|.+
T Consensus 177 ~r~ek~iavvths~fl~~llk~i~k~cd~dv~~~~-~~~~Nce~r~~~i 224 (248)
T KOG4754|consen 177 KRPEKEIAVVTHSGFLRSLLKKIQKDCDPDVKPEI-LSFSNCEHRSFVI 224 (248)
T ss_pred hCccceEEEEEehHHHHHHHHHhccccCcccchhh-hccCCCcCCceeE
Confidence 99999999999999999999999999988877764 5669999987743
No 8
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=100.00 E-value=4.4e-33 Score=224.57 Aligned_cols=182 Identities=16% Similarity=0.091 Sum_probs=144.5
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|+.|.|||+.|++||+.+++.|+..+ .++++|||||++||+|||+.++....
T Consensus 9 HG~t~~n~~~~~qG~~D~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~sSpl~Ra~~TA~~i~~~~~------------- 73 (230)
T PRK14117 9 HGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAG--IEFDLAFTSVLKRAIKTTNLALEASD------------- 73 (230)
T ss_pred CccccCcccCCcCCCCCCCcCHHHHHHHHHHHHHHHHcC--CCCCEEEECCcHHHHHHHHHHHHhcc-------------
Confidence 9999999864 5889999999999999999999998632 37999999999999999999864220
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccC-----------------------CCCCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------------DKLWK 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~-----------------------~~~~~ 136 (219)
....++.+++.|+|+ ||.|+ |++.+++.+.||...+..|.... .....
T Consensus 74 -----~~~~~~~~~~~LrE~~fG~wE---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (230)
T PRK14117 74 -----QLWVPVEKSWRLNERHYGGLT---GKNKAEAAEQFGDEQVHIWRRSYDVLPPAMAKDDEYSAHTDRRYASLDDSV 145 (230)
T ss_pred -----cCCCCceeCCccccccchhhc---CCCHHHHHHHccHHHHHHHhcccccCCCcccccccccccccccccccccCC
Confidence 012578889999999 99996 99999999999863233333210 00125
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~-~~--~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
+|++||+.++.+|+..+++.+. .. .+++|+|||||++|+++++.+++.+.... ....+.||++++++++.
T Consensus 146 ~p~GEs~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~~ir~ll~~~lg~~~~~~---~~~~~~n~s~~~i~~~~ 218 (230)
T PRK14117 146 IPDAENLKVTLERALPFWEDKIAPALKDGKNVFVGAHGNSIRALVKHIKGLSDDEI---MDVEIPNFPPLVFEFDE 218 (230)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHHHHHHHHHHhCcCHHHH---hhcCCCCceEEEEEECC
Confidence 6899999999999999999975 22 35799999999999999999998633222 23579999999998863
No 9
>PRK03482 phosphoglycerate mutase; Provisional
Probab=100.00 E-value=1.9e-32 Score=219.10 Aligned_cols=174 Identities=22% Similarity=0.121 Sum_probs=140.8
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.+|... .++..|++||+.|++||+.++++|.. .++++|||||+.||+|||+.|++.++
T Consensus 9 HG~t~~n~~~~~~g~~d~~Lt~~G~~qA~~~~~~l~~----~~~~~I~sSpl~Ra~qTA~~i~~~~~------------- 71 (215)
T PRK03482 9 HGETQWNAERRIQGQSDSPLTAKGEQQAMQVAERAKE----LGITHIISSDLGRTRRTAEIIAQACG------------- 71 (215)
T ss_pred CCCcccccccccCCCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEECCcHHHHHHHHHHHHhcC-------------
Confidence 9999999853 46788999999999999999999987 37999999999999999999987663
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|+ +|.|+ |.+.+++...++.+ ...+.. ....+.+|++||+.++.+|+..+++.+..
T Consensus 72 --------~~~~~~~~L~E~~~G~~e---g~~~~~~~~~~~~~-~~~~~~-~~~~~~~p~gEs~~~~~~Rv~~~l~~~~~ 138 (215)
T PRK03482 72 --------CDIIFDPRLRELNMGVLE---KRHIDSLTEEEEGW-RRQLVN-GTVDGRIPEGESMQELSDRMHAALESCLE 138 (215)
T ss_pred --------CCeeEChhccccCCcccc---CCcHHHHHhhHHHH-HHhhhc-CCCccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 678999999999 99996 88888876543321 111111 12235678899999999999999999876
Q ss_pred c-CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 160 ~-~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
. .+++|+|||||++|+++++++++.+.... ....+.||+++.+++.
T Consensus 139 ~~~~~~vliVsHg~~i~~l~~~l~~~~~~~~---~~~~~~n~sis~~~~~ 185 (215)
T PRK03482 139 LPQGSRPLLVSHGIALGCLVSTILGLPAWAE---RRLRLRNCSISRVDYQ 185 (215)
T ss_pred hCCCCeEEEEeCcHHHHHHHHHHhCCChhhh---hccCCCCcEEEEEEEe
Confidence 5 46789999999999999999998633222 2357999999999885
No 10
>PRK01112 phosphoglyceromutase; Provisional
Probab=100.00 E-value=1.7e-32 Score=220.65 Aligned_cols=196 Identities=18% Similarity=0.150 Sum_probs=147.9
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCC-CCCCC-----
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGES-QTDGI----- 74 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~-~~~~~----- 74 (219)
||+|.+|... .+|+.|.+||+.|++||++++++|++ .++++|||||+.||+|||+.|++.++.. .+...
T Consensus 9 HGqt~~n~~~~~~G~~D~~Lte~G~~Qa~~l~~~L~~----~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~~~ 84 (228)
T PRK01112 9 HGQSVWNAKNLFTGWVDIPLSQQGIAEAIAAGEKIKD----LPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIVHEEDD 84 (228)
T ss_pred CCCCccccccccCCCCCCCcCHHHHHHHHHHHHHhhc----CCCCEEEEcCcHHHHHHHHHHHHhhcccccccccccccc
Confidence 9999999854 47889999999999999999999987 3899999999999999999997532100 00000
Q ss_pred CCCCCccc--cccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHH
Q 027767 75 DAHPSLTA--TATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGM 151 (219)
Q Consensus 75 ~~~~~~~~--~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~ 151 (219)
...+.+.+ .......++.+.+.|+|+ +|.|+ |++.+++.+.||...+..|.. +....+|++||+.++.+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~e---G~~~~ei~~~~~~~~~~~w~~--~~~~~~p~GES~~d~~~Rv~ 159 (228)
T PRK01112 85 KKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQ---GKNKAETAEKFGEEQVKLWRR--SYKTAPPQGESLEDTGQRTL 159 (228)
T ss_pred cccccccccccccccCCCeeecCccccccccccC---CCCHHHHHHHCcHHHHHHHhC--cCCCCCCCCCCHHHHHHHHH
Confidence 00000000 000123578899999999 99996 999999999998642344542 22367899999999999999
Q ss_pred HHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 152 EFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 152 ~~~~~l~-~~--~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.+++.++ +. .+++|+|||||++|+++++.+++.+.... ....+.||++++|+++.
T Consensus 160 ~~l~~~~~~~~~~~~~ilVVsHg~vir~l~~~ll~~~~~~~---~~~~~~~~~~~~~~~~~ 217 (228)
T PRK01112 160 PYFQNRILPHLQQGKNVFVSAHGNSLRSLIMDLEKLSEEEV---LSLELPTGKPIVYEWTG 217 (228)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhcccCCcceEEEEECC
Confidence 9999764 32 56899999999999999999998643322 13578999999998874
No 11
>PRK01295 phosphoglyceromutase; Provisional
Probab=100.00 E-value=3.1e-32 Score=216.25 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=145.9
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|+.|.|||+.|++||+.++.+|++.+ .++++|||||+.||+|||++|+..++
T Consensus 10 HGet~~n~~~~~~G~~d~~Lt~~G~~qA~~~~~~L~~~~--~~~d~i~sSpl~Ra~qTA~~i~~~~~------------- 74 (206)
T PRK01295 10 HGQSEWNLKNLFTGWRDPDLTEQGVAEAKAAGRKLKAAG--LKFDIAFTSALSRAQHTCQLILEELG------------- 74 (206)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEeCCcHHHHHHHHHHHHHcC-------------
Confidence 9999999864 4788999999999999999999998643 36999999999999999999987652
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHH-HHHh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFM-KWLW 158 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~-~~l~ 158 (219)
....++.+++.|+|+ +|.|+ |++.+++.+.||......|.. +....+|++||+.++.+|+..++ +.+.
T Consensus 75 -----~~~~~~~~~~~L~E~~~G~~e---g~~~~e~~~~~~~~~~~~~~~--~~~~~~p~GES~~~~~~Rv~~~~~~~i~ 144 (206)
T PRK01295 75 -----QPGLETIRDQALNERDYGDLS---GLNKDDARAKWGEEQVHIWRR--SYDVPPPGGESLKDTGARVLPYYLQEIL 144 (206)
T ss_pred -----CCCCCeEECCccccccccccc---CCcHHHHHHHchHHHHHHhhc--ccCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 122578899999999 99996 999999999998642334532 23467899999999999999974 5565
Q ss_pred hc--CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 159 TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 159 ~~--~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.. .+++|+|||||++|++++.++++.+.... ....+.|++..++.++.
T Consensus 145 ~~~~~~~~vliVtHg~~ir~l~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~ 194 (206)
T PRK01295 145 PRVLRGERVLVAAHGNSLRALVMVLDGLTPEQI---LKLELATGVPIVYRLNA 194 (206)
T ss_pred HhccCCCeEEEEcChHHHHHHHHHHhCCCHHHH---hhcCCCCCCcEEEEecC
Confidence 43 56899999999999999999998643322 13578899888887753
No 12
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=100.00 E-value=1.8e-32 Score=217.46 Aligned_cols=173 Identities=18% Similarity=0.141 Sum_probs=140.3
Q ss_pred CCCCCCCccc-CCCCc-CCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCC
Q 027767 2 EGNNGPEALL-SQEFF-DAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPS 79 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~-D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~ 79 (219)
||||.+|... .++.. |.|||+.|++||++++++|+. .++++|||||+.||+|||+.+++.++
T Consensus 7 HG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~----~~~~~i~sSpl~Ra~qTA~~i~~~~~------------ 70 (204)
T TIGR03848 7 HGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLAD----LPIAAIVSSPLERCRETAEPIAEARG------------ 70 (204)
T ss_pred CCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhc----CCCCEEEeCcHHHHHHHHHHHHHhcC------------
Confidence 9999999854 45666 699999999999999999986 48999999999999999999987653
Q ss_pred ccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 027767 80 LTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (219)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~ 158 (219)
.++.+++.|+|+ +|.|+ |++.+++... + .+..|...+ ....+|++||+.++.+|+..+++.+.
T Consensus 71 ---------~~~~~~~~L~E~~~G~~e---G~~~~e~~~~-~--~~~~~~~~~-~~~~~p~gEs~~~~~~R~~~~l~~~~ 134 (204)
T TIGR03848 71 ---------LPPRVDERLGECDYGDWT---GRELKELAKE-P--LWPVVQAHP-SAAVFPGGESLAQVQARAVAAVREHD 134 (204)
T ss_pred ---------CCceECcccccCCCCeeC---CcCHHHHhCc-H--HHHHHhcCc-ccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999 99996 9998888653 1 133333222 22456889999999999999999886
Q ss_pred hc------CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 159 TR------QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 159 ~~------~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
+. .+++|+|||||++|+++++.+++...... ....+.||+++.+++..
T Consensus 135 ~~~~~~~~~~~~vliVsHg~~ir~ll~~~lg~~~~~~---~~~~~~n~sit~l~~~~ 188 (204)
T TIGR03848 135 ARLAAEHGPDAVWVACSHGDVIKSVLADALGMHLDLF---QRIVVDPCSVSVVRYTP 188 (204)
T ss_pred HHhhhccCCCCEEEEEeCChHHHHHHHHHhCCCHHHh---heeeeCCCeEEEEEEeC
Confidence 53 45789999999999999999998633222 13579999999998864
No 13
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=100.00 E-value=4.2e-32 Score=220.49 Aligned_cols=182 Identities=17% Similarity=0.120 Sum_probs=144.8
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+++.|.+||+.|++||+.++++|+..+ .++++|||||++||+|||++|+..++
T Consensus 8 HGqt~~n~~~~~~G~~D~~Lt~~G~~QA~~la~~L~~~~--~~~d~iysSpl~Ra~qTA~ii~~~~~------------- 72 (245)
T TIGR01258 8 HGESEWNALNLFTGWVDVKLSEKGQQEAKRAGELLKEEG--YEFDVAYTSLLKRAIHTLNIALDELD------------- 72 (245)
T ss_pred CCCcCccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcChHHHHHHHHHHHHhcC-------------
Confidence 9999999864 4788999999999999999999998743 36899999999999999999987552
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccC-----------------CCCC------C
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------DKLW------K 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~-----------------~~~~------~ 136 (219)
....++.+++.|+|+ ||.|+ |++.+++...||...+..|.... ++.+ .
T Consensus 73 -----~~~~~i~~~~~L~E~~~G~~e---G~~~~ei~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~d~~y~~~~~~~ 144 (245)
T TIGR01258 73 -----QLWIPVKKSWRLNERHYGALQ---GLNKAETAAKYGEEQVNIWRRSFDVPPPPIDESDPRSPHNDPRYAHLDPKV 144 (245)
T ss_pred -----CCCCCeeeCcccccccCCCCc---CCCHHHHHHHhhHHHHHHHHhhccCCCCcCCcccccccccChhhhcCCccc
Confidence 011467889999999 99996 99999999988853233332210 1111 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhc---CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~~~---~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.|++||+.++.+|+..+++.+... ++++|+|||||++|+++++.+++.+.... ....+.||++++++++.
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vir~l~~~l~~l~~~~~---~~~~~~~~~~~~~~~~~ 217 (245)
T TIGR01258 145 LPLTESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSLRALVKHLEGISDEEI---LELNIPTGIPLVYELDE 217 (245)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHHHHHHHHHHCcCHHHH---hheecCCCceEEEEECC
Confidence 678999999999999999997632 56799999999999999999998633222 23578999999998763
No 14
>PRK13462 acid phosphatase; Provisional
Probab=100.00 E-value=8.4e-32 Score=213.26 Aligned_cols=166 Identities=17% Similarity=0.132 Sum_probs=137.9
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCC--EEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCC
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID--LVITSPLLRTLQTAVGVFGGDGESQTDGIDAHP 78 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~--~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~ 78 (219)
||+|.+|... .++..|.|||+.|++||+.+++.|+.. +++ .|||||+.||+|||+.+ ..
T Consensus 13 HG~t~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~----~~~~~~i~sSpl~Ra~qTA~~i--~~------------ 74 (203)
T PRK13462 13 HGETEWSKSGRHTGRTELELTETGRTQAELAGQALGEL----ELDDPLVISSPRRRALDTAKLA--GL------------ 74 (203)
T ss_pred CCCCCcccCCCccCCCCCCCCHHHHHHHHHHHHHHHhC----CCCCCEEEECchHHHHHHHHHh--cC------------
Confidence 9999999854 578899999999999999999999874 455 79999999999999987 22
Q ss_pred CccccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 027767 79 SLTATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWL 157 (219)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l 157 (219)
....+++.|+|+ ||.|+ |++..++.+.||. +..|. ...|++||+.++.+|+..+++.+
T Consensus 75 ----------~~~~~~~~LrE~~~G~~e---G~~~~ei~~~~~~--~~~~~------~~~p~gES~~~~~~Rv~~~l~~i 133 (203)
T PRK13462 75 ----------TVDEVSGLLAEWDYGSYE---GLTTPQIRESEPD--WLVWT------HGCPGGESVAQVNERADRAVALA 133 (203)
T ss_pred ----------cccccCccccccCCcccc---CCcHHHHHHhCch--HHhhc------CCCCCCccHHHHHHHHHHHHHHH
Confidence 123568999999 99996 9999999999886 33342 22468999999999999999998
Q ss_pred hhc-CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 158 WTR-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 158 ~~~-~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.+. ++++|+|||||++|+++++++++.+.... ..+.+.||++++++|+.
T Consensus 134 ~~~~~~~~vliVsHg~vir~ll~~~l~~~~~~~---~~~~~~~~s~s~~~~~~ 183 (203)
T PRK13462 134 LEHMESRDVVFVSHGHFSRAVITRWVELPLAEG---SRFAMPTASIAICGFEH 183 (203)
T ss_pred HHhCCCCCEEEEeCCHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEeeC
Confidence 765 56789999999999999999998632221 23688999999999865
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.98 E-value=8e-32 Score=219.10 Aligned_cols=182 Identities=17% Similarity=0.105 Sum_probs=145.5
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+|+.|.|||+.|++||+.++++|+..+ .++++|||||+.||+|||+.|...++
T Consensus 8 HGqt~~n~~~~~~G~~D~pLte~G~~QA~~la~~L~~~~--~~~d~IysSpl~Ra~qTA~~i~~~~~------------- 72 (247)
T PRK14115 8 HGESQWNKENRFTGWTDVDLSEKGVSEAKAAGKLLKEEG--YTFDVAYTSVLKRAIRTLWIVLDELD------------- 72 (247)
T ss_pred CCCcccccccCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEEcCCHHHHHHHHHHHHHcC-------------
Confidence 9999999864 4788999999999999999999998643 37899999999999999999987552
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccC-----------------CC------CCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESED-----------------DK------LWK 136 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~-----------------~~------~~~ 136 (219)
....++.+++.|+|+ ||.|+ |++.+++.+.+|...+..|.... ++ ...
T Consensus 73 -----~~~~~~~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (247)
T PRK14115 73 -----QMWLPVEKSWRLNERHYGALQ---GLNKAETAAKYGDEQVKIWRRSYDVPPPALEKDDERYPGHDPRYAKLPEEE 144 (247)
T ss_pred -----CCCCCceECcccccccccccc---CCCHHHHHHHhhHHHHHHHhcccccCCCcccccccccccccchhhcccCCC
Confidence 011478889999999 99996 99999999888753233332210 00 124
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhh---cCCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 137 ADAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 137 ~~~~Es~~~~~~R~~~~~~~l~~---~~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.|++||+.++.+|+..+++.++. .++++|+|||||++|+++++.+++.+.... ....+.||+++.++|+.
T Consensus 145 ~p~GES~~~~~~Rv~~~l~~~i~~~~~~~~~vlvVtHggvir~l~~~ll~~~~~~~---~~~~~~~~~~~~l~~~~ 217 (247)
T PRK14115 145 LPLTESLKDTIARVLPYWNETIAPQLKSGKRVLIAAHGNSLRALVKYLDNISDEEI---LELNIPTGVPLVYELDE 217 (247)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeChHHHHHHHHHHhCCCHHHh---heeecCCCceEEEEECC
Confidence 68999999999999999998653 256899999999999999999998643322 24689999999998874
No 16
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.98 E-value=9.9e-32 Score=218.58 Aligned_cols=182 Identities=17% Similarity=0.115 Sum_probs=144.2
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+++.|.|||+.|++||+.+++.|+..+ ..++.|||||+.||+|||+.+++..+
T Consensus 12 HGqt~~n~~~~~~G~~D~pLTe~G~~QA~~~a~~l~~~~--~~~~~IysSpl~Ra~qTA~~i~~~~~------------- 76 (249)
T PRK14120 12 HGESEWNAKNLFTGWVDVDLTEKGEAEAKRGGELLAEAG--VLPDVVYTSLLRRAIRTANLALDAAD------------- 76 (249)
T ss_pred CCCCcccccCCcCCCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEecChHHHHHHHHHHHHhcc-------------
Confidence 9999999864 4788999999999999999999998643 26899999999999999999975431
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCC----------CC-------C----CCC
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD----------KL-------W----KAD 138 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~----------~~-------~----~~~ 138 (219)
....++.+++.|+|+ ||.|+ |++..++.+.||...+..|..... .+ + .+|
T Consensus 77 -----~~~~~i~~~~~L~E~~fG~~e---G~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~~d~~~~~~~~~p 148 (249)
T PRK14120 77 -----RLWIPVRRSWRLNERHYGALQ---GKDKAETKAEYGEEQFMLWRRSYDTPPPPIEDGSEYSQDNDPRYADLGVGP 148 (249)
T ss_pred -----cCCCCeEECCCcccccccccC---CCCHHHHHHHccHHHHHHHHhccccCCCccccccccccccCccccccCCCC
Confidence 012578899999999 99996 999999999888532444432110 00 1 148
Q ss_pred CCCCHHHHHHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 139 AREPFEEVTARGMEFMKWLW-TR--QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 139 ~~Es~~~~~~R~~~~~~~l~-~~--~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
++||+.++..|+..++++++ .. ++++|+|||||++|++++..+++.+.... ....+.||+++.|.++.
T Consensus 149 ~GES~~~~~~Rv~~~l~~~~~~~~~~~~~iliVsHggvir~l~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~ 219 (249)
T PRK14120 149 RTECLKDVVARFLPYWEDDIVPDLKAGKTVLIAAHGNSLRALVKHLDGISDEDI---AGLNIPTGIPLVYELDE 219 (249)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhCCCEEEEEeCHHHHHHHHHHHhCCCHHHh---heeccCCCceEEEEECC
Confidence 99999999999999999853 32 56789999999999999999998633222 23588999999999853
No 17
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.98 E-value=8.9e-32 Score=214.03 Aligned_cols=178 Identities=22% Similarity=0.167 Sum_probs=150.2
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||+|.+|... .+++.|+|||+.|++||+.++++|+... ..+++||+||+.||+|||+++++.++
T Consensus 10 HGqt~~n~~~~~~G~~d~pLt~~G~~QA~~l~~~l~~~~--~~~~~i~sS~l~Ra~~TA~~~a~~~~------------- 74 (208)
T COG0406 10 HGETEWNVEGRLQGWTDSPLTEEGRAQAEALAERLAARD--IGFDAIYSSPLKRAQQTAEPLAEELG------------- 74 (208)
T ss_pred cCCccccccccccCCCCCCCCHHHHHHHHHHHHHHhhcC--CCCCEEEECchHHHHHHHHHHHHhcC-------------
Confidence 9999999754 4678999999999999999999999532 48999999999999999999998874
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|. +|.|+ |++..++.+.+|.. +..|..++ .....+++||+.++..|+..++..+..
T Consensus 75 --------~~~~~~~~l~E~~~G~~e---g~~~~e~~~~~p~~-~~~~~~~~-~~~~~~~gEs~~~~~~R~~~~~~~~~~ 141 (208)
T COG0406 75 --------LPLEVDDRLREIDFGDWE---GLTIDELAEEPPEE-LAAWLADP-YLAPPPGGESLADVSKRVVAALAELLR 141 (208)
T ss_pred --------CCceecCCeeEeeccccc---CCcHHHHHHhCHHH-HHHHhcCc-cccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 458899999999 99996 99999999999975 55665432 224455699999999999999999987
Q ss_pred cC-CCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHHH
Q 027767 160 RQ-EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLFF 210 (219)
Q Consensus 160 ~~-~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~~ 210 (219)
.. +++|+|||||++|++++.++++.+.. ......+.||+++.+.++.+
T Consensus 142 ~~~~~~vlvVsHg~~ir~l~~~~~~~~~~---~~~~~~~~~~si~~l~~~~~ 190 (208)
T COG0406 142 SPPGNNVLVVSHGGVIRALLAYLLGLDLE---ELWRLRLDNASVTVLEFDDG 190 (208)
T ss_pred hcCCCeEEEEEChHHHHHHHHHhcCCChh---hHHhcCCCCceEEEEEeeCC
Confidence 63 34799999999999999999986432 22357999999999999865
No 18
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.97 E-value=2.8e-30 Score=222.14 Aligned_cols=174 Identities=18% Similarity=0.149 Sum_probs=148.0
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.+|... ..+..|++||+.|++||+.+++.|+.. .+++.|||||+.||+|||+.++..++
T Consensus 179 HGet~~n~~~~~~g~~D~~Lt~~G~~QA~~l~~~l~~~---~~~d~i~sSpl~Ra~qTA~~i~~~~~------------- 242 (372)
T PRK07238 179 HGQTELSVQRRYSGRGNPELTEVGRRQAAAAARYLAAR---GGIDAVVSSPLQRARDTAAAAAKALG------------- 242 (372)
T ss_pred CCCCCcccCCeeeCCCCCCcCHHHHHHHHHHHHHHhcc---CCCCEEEECChHHHHHHHHHHHHhcC-------------
Confidence 9999999864 467789999999999999999999873 17999999999999999999987663
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|+ +|.|+ |++.+++.+.||.. +..|..++ .+.+|++||+.++.+|+..+++.|..
T Consensus 243 --------~~~~~~~~L~E~~~G~~e---g~~~~ei~~~~p~~-~~~w~~~~--~~~~p~gEs~~~~~~Rv~~~l~~l~~ 308 (372)
T PRK07238 243 --------LDVTVDDDLIETDFGAWE---GLTFAEAAERDPEL-HRAWLADT--SVAPPGGESFDAVARRVRRARDRLIA 308 (372)
T ss_pred --------CCcEECccceeCCCCccC---CCCHHHHHHHCHHH-HHHHHhCC--CCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 578899999999 99995 99999999999875 66676543 46788999999999999999999876
Q ss_pred c-CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 160 R-QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 160 ~-~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
. .+++|+|||||++|+++++++++...... ....+.||+++.++|.
T Consensus 309 ~~~~~~vlvVtHg~~ir~ll~~~l~~~~~~~---~~~~~~~~~~s~l~~~ 355 (372)
T PRK07238 309 EYPGATVLVVSHVTPIKTLLRLALDAGPGVL---YRLHLDLASLSIAEFY 355 (372)
T ss_pred HCCCCeEEEEEChHHHHHHHHHHhCCCHHHh---hhcccCCceEEEEEEE
Confidence 5 56799999999999999999998632221 2357899999999875
No 19
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.97 E-value=5.4e-30 Score=207.38 Aligned_cols=171 Identities=20% Similarity=0.134 Sum_probs=135.5
Q ss_pred CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCccccccCCCCCe
Q 027767 12 SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPI 91 (219)
Q Consensus 12 ~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (219)
.+|+.|+|||+.|++||+.+++.|+..+ .++++|||||+.||+|||+.|++.++ ....++
T Consensus 7 ~qG~~D~pLTe~G~~QA~~l~~~L~~~~--~~~d~iysSpl~Ra~qTA~~i~~~~~------------------~~~~~~ 66 (236)
T PTZ00123 7 FTGWTDVPLSEKGVQEAREAGKLLKEKG--FRFDVVYTSVLKRAIKTAWIVLEELG------------------QLHVPV 66 (236)
T ss_pred eeCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHHHHHHHHHHHhcC------------------CCCCCc
Confidence 4788999999999999999999998644 37999999999999999999987652 012567
Q ss_pred eecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCC-----------------------CCCCCCCCCCHHHHH
Q 027767 92 IAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDD-----------------------KLWKADAREPFEEVT 147 (219)
Q Consensus 92 ~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~Es~~~~~ 147 (219)
.+++.|+|+ +|.|+ |++..++.+.||...+..|..... ....+|++||+.++.
T Consensus 67 ~~~~~L~E~~~G~~E---G~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gES~~~~~ 143 (236)
T PTZ00123 67 IKSWRLNERHYGALQ---GLNKSETAEKHGEEQVKIWRRSYDIPPPPLEKSDERYPGNDPVYKDIPKDALPNTECLKDTV 143 (236)
T ss_pred eeCchhhhccccccc---CCCHHHHHHHccHHHHHHHhcccCCCCCCcccccccccccchhhhccccCCCCCCCCHHHHH
Confidence 889999999 99996 999999998888532222321100 012347899999999
Q ss_pred HHHHHHHHHHhh---cCCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 148 ARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 148 ~R~~~~~~~l~~---~~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
+|+..+++.++. .++++|+|||||++|++++..+++.+.... ....+.||++++|+|+
T Consensus 144 ~Rv~~~l~~li~~~~~~~~~vliVsHG~vir~ll~~l~~~~~~~~---~~~~~~n~~~~~~~~~ 204 (236)
T PTZ00123 144 ERVLPYWEDHIAPDILAGKKVLVAAHGNSLRALVKYLDKMSEEDI---LELNIPTGVPLVYELD 204 (236)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEeCHHHHHHHHHHHhCCCHHHH---hhccCCCCceEEEEEC
Confidence 999999998643 256799999999999999999998633222 2368999999999887
No 20
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.5e-29 Score=195.55 Aligned_cols=181 Identities=18% Similarity=0.117 Sum_probs=149.0
Q ss_pred CCCCCCCcccC-CCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALLS-QEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~~-~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||||.||..+. +||.|.+||+.|.+||++++++|.+.+ ..++.+||||++||.|||+.|++...
T Consensus 13 HGes~wN~e~~~~G~~D~~Lte~G~~qA~~~~~~l~~~~--~~~~~~~tS~l~RakqT~~~il~~~~------------- 77 (214)
T KOG0235|consen 13 HGESEWNKENIFQGWIDAPLTEKGEEQAKAAAQRLKDLN--IEFDVCYTSDLKRAKQTAELILEELK------------- 77 (214)
T ss_pred cCchhhhhhCcccccccCccChhhHHHHHHHHHHHHhcC--CcccEEecCHHHHHHHHHHHHHHhhc-------------
Confidence 99999999865 899999999999999999999999976 37889999999999999999998772
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCcc-ccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDF-KLIESEDDKLWKADAREPFEEVTARGMEFMKWLW 158 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~ 158 (219)
....|+.....|+|+ ||.+. |+...++.+.+++... ..+.........+|.+||..++.+|+..++++.+
T Consensus 78 -----~~~~pv~~~~~L~ER~yG~l~---Gl~~~e~~~~~g~~~~~~~~r~~~~~~~~~p~~EsL~~~~~R~~~~~~e~i 149 (214)
T KOG0235|consen 78 -----QKKVPVLYTWRLNERHYGDLQ---GLNKRETAKRYGEEQVYEDPRLSDLDEIPLPDGESLKDCLDRLLPFWNEEI 149 (214)
T ss_pred -----cCCcceEechhhchhhhcccc---CccHHHHHHHcchhccccchhhccCCcCCCCCCccHHHHHHHHHHHHHHhh
Confidence 234799999999999 99995 9999999999986532 3333222233557889999999999999999866
Q ss_pred hc---CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 159 TR---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 159 ~~---~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
.. ++++|+|++||..+++++.++.+...+.+ .. ....++-..+|.+|
T Consensus 150 ~~~~~~gk~Vli~aHGnsLR~i~~~l~g~s~~~i-~~--~~~~t~vp~v~~ld 199 (214)
T KOG0235|consen 150 AKESKEGKNVLIVAHGNSLRAIVKHLEGISDEAI-KE--LNLPTGVPIVYELD 199 (214)
T ss_pred hhhhcCCcEEEEEcCcHHHHHHHHHHhcCCHhhh-hh--eecccCCceEEEcc
Confidence 43 67899999999999999999998655544 22 45666666666655
No 21
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.95 E-value=1.5e-28 Score=186.44 Aligned_cols=148 Identities=28% Similarity=0.346 Sum_probs=121.9
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.+|... ..++.|+|||+.|++||+.++..|.... .++++|||||+.||+|||..+++.++
T Consensus 7 Hg~~~~n~~~~~~~~~d~~Lt~~G~~qA~~~~~~l~~~~--~~~~~i~~Sp~~R~~qTA~~~~~~~~------------- 71 (158)
T PF00300_consen 7 HGESEFNAEGRVQGDSDPPLTERGREQARQLGEYLAERD--IQIDVIYSSPLRRCIQTAEIIAEGLG------------- 71 (158)
T ss_dssp -S-BHHHHTTBCGTTSSTGBEHHHHHHHHHHHHHHHHTT--SSCSEEEEESSHHHHHHHHHHHHHHT-------------
T ss_pred CCccccccCCCcCCCCCccccHHHHHHHHhhcccccccc--cCceEEecCCcchhhhhhchhhcccc-------------
Confidence 9999988754 4667788999999999999999999533 58999999999999999999988652
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.++.+++.|+|+ +|.++ |.+..++...|+.. +..|... ...+.++++||+.++..|+.++++.+..
T Consensus 72 --------~~~~~~~~l~E~~~g~~~---g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 138 (158)
T PF00300_consen 72 --------IEIIVDPRLREIDFGDWE---GRPFDEIEEKFPDE-FEAWWSD-PYFYRPPGGESWEDFQQRVKQFLDELIA 138 (158)
T ss_dssp --------SEEEEEGGGSCCGCGGGT---TSBHHHHHHHHHHH-HHHHHHH-TSSCGSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred --------cccccccccccccchhhc---ccchhhHHhhhhcc-cchhhcc-ccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 689999999999 77663 99999999988842 4444432 2346778999999999999999999984
Q ss_pred --cCCCeEEEEeCHHHHHHH
Q 027767 160 --RQEKEIAVVSHGIFLQQT 177 (219)
Q Consensus 160 --~~~~~ilivtH~~~i~~~ 177 (219)
.++++|+|||||++|+++
T Consensus 139 ~~~~~~~vliVsHg~~i~~~ 158 (158)
T PF00300_consen 139 YKRPGENVLIVSHGGFIRAL 158 (158)
T ss_dssp HHHTTSEEEEEE-HHHHHHH
T ss_pred HhCCCCEEEEEecHHHHHhC
Confidence 588999999999999875
No 22
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.95 E-value=2.2e-27 Score=180.34 Aligned_cols=143 Identities=21% Similarity=0.179 Sum_probs=117.6
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.+|... ..+..|.|||+.|++||+.++++|.... ..+++.|||||+.||+|||+.+++.++
T Consensus 7 HG~s~~n~~~~~~g~~d~~Lt~~G~~qa~~~a~~l~~~~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~------------- 72 (155)
T smart00855 7 HGETEANREGRLTGWTDSPLTELGRAQAEALGELLASLG-RLRFDVIYSSPLLRARETAEALAIALG------------- 72 (155)
T ss_pred CCCCcccccCeEcCCCCCCCCHHHHHHHHHHHHHHHhcc-CCCCCEEEeCchHHHHHHHHHHHHhcC-------------
Confidence 9999999643 2456999999999999999999998631 138999999999999999999987662
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
.+ .+.+.|+|+ +|.++ |++..++...++.. +..| ....++++||+.++..|+.++++.+..
T Consensus 73 --------~~-~~~~~L~E~~~G~~~---g~~~~~~~~~~~~~-~~~~-----~~~~~~~gEs~~~~~~Rv~~~~~~i~~ 134 (155)
T smart00855 73 --------LG-EVDPRLRERDYGAWE---GLTKEEERAKAWTR-PADW-----LGAAPPGGESLADVVERLVRALEELIA 134 (155)
T ss_pred --------CC-CCChhhhhcccceec---CCcHHHHHHHHHHH-Hhcc-----CCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 22 378999999 99985 99998988877653 2222 235678899999999999999999976
Q ss_pred c---CCCeEEEEeCHHHHHH
Q 027767 160 R---QEKEIAVVSHGIFLQQ 176 (219)
Q Consensus 160 ~---~~~~ilivtH~~~i~~ 176 (219)
. .+++|+|||||++|++
T Consensus 135 ~~~~~~~~vlvVtHg~~ir~ 154 (155)
T smart00855 135 THDKSGQNVLIVSHGGVIRA 154 (155)
T ss_pred hcccCCCeEEEEECCccccc
Confidence 4 5678999999999875
No 23
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.94 E-value=1.2e-26 Score=212.40 Aligned_cols=195 Identities=14% Similarity=0.023 Sum_probs=143.4
Q ss_pred CCCCCCCcccC-CCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALLS-QEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~~-~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||||.||.... +| |+|||+.|++||++++++|+... ...++.|||||+.||+|||+.+..... .......+-..+
T Consensus 427 HGeT~~n~~~r~~G--d~pLt~~G~~qA~~l~~~l~~~~-~~~~~~V~sSpl~Ra~~TA~~i~~~~~-~~~~~~~~a~~~ 502 (664)
T PTZ00322 427 AGEYVDLLSGRIGG--NSRLTERGRAYSRALFEYFQKEI-STTSFTVMSSCAKRCTETVHYFAEESI-LQQSTASAASSQ 502 (664)
T ss_pred cccchhhhcCccCC--CCccCHHHHHHHHHHHHHHHhcc-CCCCcEEEcCCcHHHHHHHHHHHhccc-cccccccccccc
Confidence 99999998654 44 89999999999999999998731 024679999999999999999864310 000000000000
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHH-HHHHHHHHHHh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVT-ARGMEFMKWLW 158 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~-~R~~~~~~~l~ 158 (219)
. .....++.+++.|+|+ ||.|+ |++.+++.+.||+. +..|..++ ..+.+|+|||+.++. .|+..+++.+.
T Consensus 503 ~---~~~~~~~~~~~~L~Ei~fG~wE---G~t~~ei~~~~p~~-~~~~~~d~-~~~~~P~GES~~d~~~~R~~~~i~~l~ 574 (664)
T PTZ00322 503 S---PSLNCRVLYFPTLDDINHGDCE---GQLLSDVRRTMPNT-LQSMKADP-YYTAWPNGECIHQVFNARLEPHIHDIQ 574 (664)
T ss_pred c---ccccccccchhhhCcCCCcccC---CCCHHHHHHhCcHH-HHHHHhCC-CcCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 0 0012568889999999 99996 99999999999985 77776543 235678999999966 79999999985
Q ss_pred hcCCCeEEEEeCHHHHHHHHHHhhcCCCC--CCCCccCCCCCCceeEEehHHH
Q 027767 159 TRQEKEIAVVSHGIFLQQTLNALLNDCQT--SPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 159 ~~~~~~ilivtH~~~i~~~~~~l~~~~~~--~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
. ..++|+|||||++|++++..+++.... .+.......+.+++++.+.+..
T Consensus 575 ~-~~~~ilvVsHg~vir~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~ 626 (664)
T PTZ00322 575 A-STTPVLVVSHLHLLQGLYSYFVTDGDNIVAPQNAYKIDIPFEHVIKIRMVG 626 (664)
T ss_pred c-cCCCEEEEeCcHHHHHHHHHHhcCCccccCcccCceeeccCCcEEEEEEec
Confidence 4 347899999999999999999984210 1112224678899999987653
No 24
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.93 E-value=5.7e-26 Score=175.10 Aligned_cols=179 Identities=16% Similarity=0.145 Sum_probs=148.0
Q ss_pred CCCCCCCcccC-CCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALLS-QEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~~-~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
|||+.||.... .||.|.+||+.|++||...|+.|+..++ .||.+|||-++||++|+..+++..+
T Consensus 9 HGqSeWN~~NlFtGW~Dv~LtekG~~EA~~ag~llk~~~~--~~dia~TS~L~RAi~T~~i~L~e~d------------- 73 (230)
T COG0588 9 HGQSEWNKENLFTGWVDVDLTEKGISEAKAAGKLLKEEGL--EFDIAYTSVLKRAIKTLNIVLEESD------------- 73 (230)
T ss_pred cCchhhhhcCceeeeeecCcchhhHHHHHHHHHHHHHcCC--CcceeehHHHHHHHHHHHHHhhhhc-------------
Confidence 99999999865 7999999999999999999999999874 8999999999999999999998773
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCC----------------------
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKA---------------------- 137 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------------- 137 (219)
...+|+...-.|+|+ ||.+ +|.+..+..++|.+-.+..|...-+ ..|
T Consensus 74 -----~~~ipv~kswrLNERhYG~L---qGlnK~~t~~kyGeeqv~~wRRsyd--i~PP~~~~~~~~~~~~d~ry~~~~~ 143 (230)
T COG0588 74 -----QLWIPVIKSWRLNERHYGAL---QGLNKAETAAKYGEEQVLIWRRSYD--IPPPKLEKDDERSPHRDRRYAHLDI 143 (230)
T ss_pred -----ccCcchhhHHHhhhhhhhhh---hcCChHHHHHHHhHHHHHHHHHhcC--CCCCCcccccccccccccccccccc
Confidence 134677777899999 9988 5999999999997655555543110 111
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhh---cCCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 138 ---DAREPFEEVTARGMEFMKWLWT---RQEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 138 ---~~~Es~~~~~~R~~~~~~~l~~---~~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
|..||..+..+|+..+|+..+. +.+++|+|++||..+++++.++.+.+...+.. ..++++--.+|++|
T Consensus 144 ~~~p~~EsLkdt~~Rv~Pyw~~~I~p~l~~Gk~VlI~AHGNSlRaLiK~L~~iSd~dI~~---l~IPtg~Plvyeld 217 (230)
T COG0588 144 GGLPLTESLKDTVERVLPYWEDDIAPNLKSGKNVLIVAHGNSLRALIKYLEGISDEDILD---LNIPTGIPLVYELD 217 (230)
T ss_pred cCCCccchHHHHHHHhhHHHHHHhhHHHhCCCeEEEEecchhHHHHHHHHhCCCHHHhhh---cccCCCCcEEEEEC
Confidence 2459999999999999998654 27899999999999999999999987666633 57777777777766
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.91 E-value=1.8e-23 Score=174.17 Aligned_cols=158 Identities=18% Similarity=0.088 Sum_probs=113.4
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCC----CCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCC
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLT----QKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAH 77 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~----~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~ 77 (219)
|||++++. ..+..+.+||+.|++||+.+|++|++.... .++++||||||.||+|||++|++.+
T Consensus 110 HGq~~~~~--~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~~----------- 176 (299)
T PTZ00122 110 HGQYINES--SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEAF----------- 176 (299)
T ss_pred CCCCCCCC--CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHhC-----------
Confidence 99987763 111222349999999999999999873110 1799999999999999999998755
Q ss_pred CCccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 027767 78 PSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWL 157 (219)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l 157 (219)
...++.++++|+|.. .+. + .|. + ..+.++++|+ .++.+|+..+++.+
T Consensus 177 ---------~~~~v~~d~~LrEG~---~~~---~-------~~~--~--------~~~~~~gee~-~~~~~Rv~~al~~i 223 (299)
T PTZ00122 177 ---------PGVRLIEDPNLAEGV---PCA---P-------DPP--S--------RGFKPTIEEI-LEDMKRIEAAFEKY 223 (299)
T ss_pred ---------CCCCceeCcccccCC---ccc---c-------Ccc--c--------cccCCCcchH-HHHHHHHHHHHHHH
Confidence 226788899999941 110 0 010 0 1133444555 66799999999998
Q ss_pred hhc----CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 158 WTR----QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 158 ~~~----~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
..+ ++++++|||||++|+++++.+++.+... .+...+.||+++.+.+.
T Consensus 224 ~~r~~~~~~~~vLVVsHGgvIR~ll~~lLglp~~~---~~~~~~~N~sit~l~~~ 275 (299)
T PTZ00122 224 FHRPVEDEDSVEIIVCHGNVIRYLVCRALQLPPEA---WLRLSLYNCGITWIVIS 275 (299)
T ss_pred HHhcccCCCCeEEEEeCChHHHHHHHHHhCcCHHH---HhhccCCCceEEEEEEe
Confidence 754 2357899999999999999999853221 12357899999999875
No 26
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.89 E-value=1.7e-22 Score=152.84 Aligned_cols=135 Identities=27% Similarity=0.228 Sum_probs=108.1
Q ss_pred CCCCCCCccc-CCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALL-SQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~-~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.++... ..+..|.+||+.|++||+.++++|...+ .+++.|||||+.||+|||+.+.+.+
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~~~~~l~~~~--~~~~~i~~Sp~~Ra~qTa~~l~~~~-------------- 70 (153)
T cd07067 7 HGESEWNAEGRFQGWTDVPLTEKGREQARALGKRLKELG--IKFDRIYSSPLKRAIQTAEIILEEL-------------- 70 (153)
T ss_pred CCCCcccccCcccCCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECcHHHHHHHHHHHHHhc--------------
Confidence 9999998764 4577899999999999999999999843 3799999999999999999998754
Q ss_pred cccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 027767 81 TATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~ 160 (219)
...++.+.+.|+| .|+..+++.+.+.
T Consensus 71 ------~~~~~~~~~~L~e------------------------------------------------~R~~~~~~~l~~~ 96 (153)
T cd07067 71 ------PGLPVEVDPRLRE------------------------------------------------ARVLPALEELIAP 96 (153)
T ss_pred ------CCCCceeCccchH------------------------------------------------HHHHHHHHHHHHh
Confidence 0134444433333 7888999988765
Q ss_pred -CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 161 -QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 161 -~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
.+++|+||||+++|+.++..+.+.+.... ....+.||+++.+.++.
T Consensus 97 ~~~~~iliV~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~s~~~~~~~~ 143 (153)
T cd07067 97 HDGKNVLIVSHGGVLRALLAYLLGLSDEDI---LRLNLPNGSISVLELDE 143 (153)
T ss_pred CCCCeEEEEeChHHHHHHHHHHhCCCHHHH---HhcCCCCceEEEEEEeC
Confidence 57899999999999999999998632221 23689999999998864
No 27
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.82 E-value=2.6e-19 Score=134.96 Aligned_cols=132 Identities=27% Similarity=0.264 Sum_probs=103.8
Q ss_pred CCCCCCCcccC-CCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALLS-QEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~~-~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++.++.... .+..|.+||+.|++||..++++|+... ..++.|||||+.||+|||+.+...+.
T Consensus 7 Hg~~~~~~~~~~~~~~d~~Lt~~G~~qa~~l~~~l~~~~--~~~~~v~sSp~~R~~~Ta~~~~~~~~------------- 71 (153)
T cd07040 7 HGEREPNAEGRFTGWGDGPLTEKGRQQARELGKALRERY--IKFDRIYSSPLKRAIQTAEIILEGLF------------- 71 (153)
T ss_pred CCCCccccCCCccCCCCCCcCHHHHHHHHHHHHHHHHhC--CCCCEEEECChHHHHHHHHHHHHHhc-------------
Confidence 99999987654 678999999999999999999999843 27999999999999999999987651
Q ss_pred cccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 027767 81 TATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR 160 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~ 160 (219)
...++.+.+ ..|+..++..+...
T Consensus 72 ------~~~~~~~~~---------------------------------------------------~~r~~~~~~~~~~~ 94 (153)
T cd07040 72 ------EGLPVEVDP---------------------------------------------------RARVLNALLELLAR 94 (153)
T ss_pred ------CCCCeEECH---------------------------------------------------HHHHHHHHHHHHHh
Confidence 001111100 08888888888765
Q ss_pred ---CCCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 161 ---QEKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 161 ---~~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
.+++|+||||+++|+.++.++.+...... ....+.+|++..++++
T Consensus 95 ~~~~~~~iliv~H~~~i~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~ 142 (153)
T cd07040 95 HLLDGKNVLIVSHGGTIRALLAALLGLSDEEI---LSLNLPNGSILVLELD 142 (153)
T ss_pred hCCCCCEEEEEeCCHHHHHHHHHHhCcCHHHh---ccccCCCCceEEEEEc
Confidence 57899999999999999999998532222 2357899999998875
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.75 E-value=4.8e-17 Score=123.13 Aligned_cols=132 Identities=14% Similarity=0.043 Sum_probs=95.3
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCcc
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~ 81 (219)
||++.++.. +..|.+||+.|++||+.++.+|...+ ..++.|||||+.||+|||+.+.+.++
T Consensus 8 Hg~a~~~~~---~d~dr~Lt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~~-------------- 68 (152)
T TIGR00249 8 HGDAALDAA---SDSVRPLTTNGCDESRLVAQWLKGQG--VEIERILVSPFVRAEQTAEIVGDCLN-------------- 68 (152)
T ss_pred CCCcccccC---CCCCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCcHHHHHHHHHHHHHcC--------------
Confidence 999988765 56799999999999999999998754 37899999999999999999987652
Q ss_pred ccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 027767 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~ 161 (219)
....+... +. .. | .++..+ +..+++.+....
T Consensus 69 -----~~~~~~~~-------------------------~~-------------l~-p-~~~~~~----~~~~l~~~~~~~ 99 (152)
T TIGR00249 69 -----LPSSAEVL-------------------------EG-------------LT-P-CGDIGL----VSDYLEALTNEG 99 (152)
T ss_pred -----CCcceEEc-------------------------cC-------------cC-C-CCCHHH----HHHHHHHHHhcC
Confidence 00111100 00 00 1 122222 444444544334
Q ss_pred CCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 162 ~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
.++|+||+|+..|..++..+.+...+ ..++.|++..++|+
T Consensus 100 ~~~vliVgH~P~i~~l~~~l~~~~~~-------~~~~~~~~~~l~~~ 139 (152)
T TIGR00249 100 VASVLLVSHLPLVGYLVAELCPGENP-------IMFTTGAIASLLWD 139 (152)
T ss_pred CCEEEEEeCCCCHHHHHHHHhCCCCC-------CcCcceeEEEEEEe
Confidence 67999999999999999999874211 46889999999886
No 29
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.73 E-value=1.5e-16 Score=121.32 Aligned_cols=132 Identities=16% Similarity=0.092 Sum_probs=93.1
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCcc
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~ 81 (219)
||++.++.. +..|.|||+.|++||+.++.+|...+ ..++.|||||+.||+|||+.+.+.++
T Consensus 8 Hg~a~~~~~---~d~~rpLt~~G~~qa~~~~~~l~~~~--~~~d~i~sSp~~Ra~qTa~~l~~~~~-------------- 68 (159)
T PRK10848 8 HGDAALDAA---SDSVRPLTTCGCDESRLMANWLKGQK--VDIERVLVSPYLRAEQTLEVVGECLN-------------- 68 (159)
T ss_pred CCCCCCCCC---CCcCCCcCHHHHHHHHHHHHHHHhCC--CCCCEEEECCHHHHHHHHHHHHHHhC--------------
Confidence 999998853 45578999999999999999998754 36899999999999999999987652
Q ss_pred ccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 027767 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~ 161 (219)
....+... . ..+|. .+. ..+..+++.+...+
T Consensus 69 -----~~~~~~~~---~------------------~l~~~-------------------~~~----~~~~~~l~~~~~~~ 99 (159)
T PRK10848 69 -----LPASAEVL---P------------------ELTPC-------------------GDV----GLVSAYLQALANEG 99 (159)
T ss_pred -----CCCceEEc---c------------------CCCCC-------------------CCH----HHHHHHHHHHHhcC
Confidence 00111100 0 00010 000 23444555554445
Q ss_pred CCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 162 ~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
.++|+||+|...+..++..+.+.... ..|++|++..++|+
T Consensus 100 ~~~vllVgH~P~l~~l~~~L~~~~~~-------~~~~t~~i~~l~~~ 139 (159)
T PRK10848 100 VASVLVISHLPLVGYLVAELCPGETP-------PMFTTSAIACVTLD 139 (159)
T ss_pred CCeEEEEeCcCcHHHHHHHHhCCCCC-------CCcCCceEEEEEec
Confidence 57999999999999999998864211 14889999999987
No 30
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=3.7e-16 Score=126.25 Aligned_cols=147 Identities=19% Similarity=0.107 Sum_probs=111.4
Q ss_pred CcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCccccccCCCCCeeec
Q 027767 15 FFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAV 94 (219)
Q Consensus 15 ~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (219)
..|+|||..|.-||+..|+.|.+.+ ..++.||+||..||+|||..+.+.++. .....+.++
T Consensus 65 ~~d~pit~~g~~~~~~~gr~l~~a~--~~i~~ifcSPs~r~VqTa~~i~~~~g~-----------------e~~~~i~ve 125 (272)
T KOG3734|consen 65 PIDPPITVSGFIQCKLIGRELLNAG--IAIDVIFCSPSLRCVQTAAKIKKGLGI-----------------EKKLKIRVE 125 (272)
T ss_pred ccCCCccchhHHHHHHHHHHHHhcC--CCcceeecCCchhHHHHHHHHHHhhch-----------------hcCeeEEec
Confidence 3699999999999999999999987 489999999999999999999998841 134678889
Q ss_pred Cchhhhc-CCCCC--CCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc-CCCeEEEEeC
Q 027767 95 ELCRERL-GVHPC--DKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR-QEKEIAVVSH 170 (219)
Q Consensus 95 ~~l~E~~-g~~~~--~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~-~~~~ilivtH 170 (219)
|+|-|.. -.... +.-.+..++....+.++....- ..-..+.++||.+++..|+..+++.|+.+ +++++|||||
T Consensus 126 PgL~e~~~~~~~~~~p~~is~~el~~~~~~VD~~y~P---~~~~~~~~~es~e~~~~R~~~~~k~i~~k~~~~~lLIV~H 202 (272)
T KOG3734|consen 126 PGLFEPEKWPKDGKFPFFISPDELKFPGFPVDLNYDP---VYKETPRWGESLEDCNDRIQKVFKAIADKYPNENLLIVAH 202 (272)
T ss_pred chhcchhhhcccCCCCCcCCHHHHhccCCCcccccch---hhhhcccccccHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 9999972 11110 1123455655544433222110 00022567899999999999999999987 7778999999
Q ss_pred HHHHHHHHHHhhc
Q 027767 171 GIFLQQTLNALLN 183 (219)
Q Consensus 171 ~~~i~~~~~~l~~ 183 (219)
|..+.+..+.+.|
T Consensus 203 ~~sv~~~~~~l~~ 215 (272)
T KOG3734|consen 203 GSSVDTCSAQLQG 215 (272)
T ss_pred cchHHHHHHHhcC
Confidence 9999999998877
No 31
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.65 E-value=2.4e-15 Score=128.28 Aligned_cols=150 Identities=23% Similarity=0.191 Sum_probs=122.3
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCC-EEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCc
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKID-LVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSL 80 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~-~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~ 80 (219)
||++..|..+..+. |++|++.|.+-|+.+.+++.... ..+ .||||++.||+|||. .++.-
T Consensus 247 ~geS~~n~~grigg-ds~ls~~g~~ya~~l~~f~~~~~---~~dl~vwts~~~rti~ta~-~l~~~-------------- 307 (438)
T KOG0234|consen 247 HGESEFNVEGRIGG-DSPLSERGSQYAKSLIKFVEEQS---SSDLDVWTSQRKRTIQTAE-GLKLD-------------- 307 (438)
T ss_pred cCCCccccccccCC-cccccHHHHHHHHHHHHHHhhhc---ccCceeccchHHHHhhhHh-hcCcc--------------
Confidence 89999999876544 99999999999999999998863 455 899999999999999 43321
Q ss_pred cccccCCCCCeeecCchhhh-cCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 027767 81 TATATVNCPPIIAVELCRER-LGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWT 159 (219)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~E~-~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~ 159 (219)
..+..+..|+|. .|..+ |++..+++..||.. |..-..+ ...++-|++||+.|+..|++..+-.+-.
T Consensus 308 --------~~~~~~~~Ldei~ag~~~---g~t~eeI~~~~p~e-~~~r~~d-ky~yry~~gESy~D~v~RlePvImElEr 374 (438)
T KOG0234|consen 308 --------YSVEQWKALDEIDAGVCE---GLTYEEIETNYPEE-FALRDKD-KYRYRYPGGESYSDLVQRLEPVIMELER 374 (438)
T ss_pred --------hhhhhHhhcCcccccccc---cccHHHHHHhCchh-hhhccCC-cceeecCCCCCHHHHHHhhhhHhHhhhh
Confidence 124667788998 88764 99999999999974 4443332 3447788999999999999999999854
Q ss_pred cCCCeEEEEeCHHHHHHHHHHhhcCC
Q 027767 160 RQEKEIAVVSHGIFLQQTLNALLNDC 185 (219)
Q Consensus 160 ~~~~~ilivtH~~~i~~~~~~l~~~~ 185 (219)
+. +|+||||..+|++++..+++..
T Consensus 375 ~~--~Vlvi~Hqavircll~Yf~~~~ 398 (438)
T KOG0234|consen 375 QE--NVLVITHQAVIRCLLAYFLNCS 398 (438)
T ss_pred cc--cEEEEecHHHHHHHHHHHhcCC
Confidence 33 4999999999999999999853
No 32
>PRK06193 hypothetical protein; Provisional
Probab=99.64 E-value=3.9e-15 Score=117.30 Aligned_cols=121 Identities=17% Similarity=0.114 Sum_probs=86.4
Q ss_pred CCCCCCCccc--CCCC----cCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCC
Q 027767 2 EGNNGPEALL--SQEF----FDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGID 75 (219)
Q Consensus 2 hG~~~~~~~~--~~~~----~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~ 75 (219)
||++.+|... ..+. .|.+||++|++||+.++++|+..+ ..++.|||||+.||+|||+.++....
T Consensus 50 HGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~--~~~d~V~sSpl~Ra~qTA~il~~~~~-------- 119 (206)
T PRK06193 50 HAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALA--IPVGKVISSPYCRAWETAQLAFGRHE-------- 119 (206)
T ss_pred CccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECCcHHHHHHHHHHhcccc--------
Confidence 9999766532 2222 267999999999999999999754 37899999999999999999864320
Q ss_pred CCCCccccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHH
Q 027767 76 AHPSLTATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMK 155 (219)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~ 155 (219)
.++ . ++.. + ...+..|+...+.+|+..+++
T Consensus 120 -------------~~~----~----l~~~---------------~--------------~~~~~~~~~~~y~~~l~~~I~ 149 (206)
T PRK06193 120 -------------KEI----R----LNFL---------------N--------------SEPVPAERNALLKAGLRPLLT 149 (206)
T ss_pred -------------cCc----c----cccc---------------c--------------ccCCChhhHHHHHHHHHHHHh
Confidence 000 0 0000 0 001134677777799999999
Q ss_pred HHhhcCCCeEEEEeCHHHHHHHHHHhhc
Q 027767 156 WLWTRQEKEIAVVSHGIFLQQTLNALLN 183 (219)
Q Consensus 156 ~l~~~~~~~ilivtH~~~i~~~~~~l~~ 183 (219)
.+. ...++|+||+|+..|..++..+.+
T Consensus 150 ~l~-~~~~~vLlVgHnp~i~~l~g~~~~ 176 (206)
T PRK06193 150 TPP-DPGTNTVLVGHDDNLEAATGIYPE 176 (206)
T ss_pred hCC-CCCCeEEEEeCchHHHHHhCCCCc
Confidence 885 456789999999999988765544
No 33
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.63 E-value=1.7e-15 Score=117.14 Aligned_cols=142 Identities=20% Similarity=0.182 Sum_probs=101.4
Q ss_pred CCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCccccccCCCCCeeecCchh
Q 027767 19 HLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCR 98 (219)
Q Consensus 19 ~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (219)
.||++|++||+.+|++|++.++ ++|.|+.|.|.||.+||.+|++++. .....+..+.|+
T Consensus 113 hLTelGReQAE~tGkRL~elgl--k~d~vv~StM~RA~ETadIIlk~l~-------------------d~lk~~s~~ll~ 171 (284)
T KOG4609|consen 113 HLTELGREQAELTGKRLAELGL--KFDKVVASTMVRATETADIILKHLP-------------------DDLKRVSCPLLR 171 (284)
T ss_pred hcchhhHHHHHHHhHHHHHcCC--chhhhhhhhhhhhHHHHHHHHHhCC-------------------Cccceecccccc
Confidence 8999999999999999999985 9999999999999999999999882 224566677777
Q ss_pred hhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhc------CCCeEEEEeCHH
Q 027767 99 ERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTR------QEKEIAVVSHGI 172 (219)
Q Consensus 99 E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~------~~~~ilivtH~~ 172 (219)
|--. ++ |+-+...| ++...+=+. =-+|+..++...+.+ ++.-.+||+|+.
T Consensus 172 EGaP-~p--------------pdPp~k~w--------rp~~~qy~r-dgaRIEaafRryfhRA~p~QeedSy~liV~HaN 227 (284)
T KOG4609|consen 172 EGAP-YP--------------PDPPVKHW--------RPLDPQYYR-DGARIEAAFRRYFHRASPSQEEDSYELIVCHAN 227 (284)
T ss_pred cCCC-CC--------------CCCCcccC--------CccChHhhh-cchHHHHHHHHHHhhcCcccccccEEEEEeecc
Confidence 7521 11 11112233 222111111 137888888877653 345689999999
Q ss_pred HHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHH
Q 027767 173 FLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFL 208 (219)
Q Consensus 173 ~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~ 208 (219)
+|+-+++..+.. |.- ..+...+.|||++-+.+.
T Consensus 228 VIRY~icRALq~--Ppe-gWlR~nlnh~SiTWlti~ 260 (284)
T KOG4609|consen 228 VIRYFICRALQF--PPE-GWLRMNLNHCSITWLTIS 260 (284)
T ss_pred hhhhhhhhhhcC--Ccc-hhheecccCcceEEEEEc
Confidence 999999988764 221 223568899999977665
No 34
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.59 E-value=2.5e-14 Score=111.82 Aligned_cols=59 Identities=17% Similarity=0.006 Sum_probs=46.2
Q ss_pred CCCC-CCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhc
Q 027767 2 EGNN-GPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFG 64 (219)
Q Consensus 2 hG~~-~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~ 64 (219)
||++ .|... .....+.|||++|++||+.++++|++.. ..+.|||||+.||+|||+.+..
T Consensus 62 HGet~~~~~~-~~~sD~RpLTerG~~qA~~lg~~L~~~~---~~d~I~sSpa~Ra~qTAe~ia~ 121 (201)
T PRK15416 62 HAERCDRSDN-QCLSDKTGITVKGTQDARELGKAFSADI---PDYDLYSSNTVRTIQSATWFSA 121 (201)
T ss_pred CccccCccCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCCEEEECCCHHHHHHHHHHhc
Confidence 9998 44422 1122237999999999999999998642 3479999999999999999965
No 35
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.57 E-value=3.7e-14 Score=107.27 Aligned_cols=134 Identities=19% Similarity=0.155 Sum_probs=95.9
Q ss_pred CCCCCCCcccCCCCcCCCCChhHHHHHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHhhcCCCCCCCCCCCCCCCcc
Q 027767 2 EGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLT 81 (219)
Q Consensus 2 hG~~~~~~~~~~~~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~~~~~~~~~~~~ 81 (219)
||++.|.... ...+|-+||+.|+++|+.+|++|+..+. .||+|+|||..||+|||+.+.+.++
T Consensus 9 HgkA~~~~~~-~~D~dR~Lt~~G~~ea~~~a~~L~~~~~--~~D~VL~Spa~Ra~QTae~v~~~~~-------------- 71 (163)
T COG2062 9 HGKAEWAAPG-IADFDRPLTERGRKEAELVAAWLAGQGV--EPDLVLVSPAVRARQTAEIVAEHLG-------------- 71 (163)
T ss_pred cccccccCCC-CCCccCcCCHHHHHHHHHHHHHHHhcCC--CCCEEEeChhHHHHHHHHHHHHhhC--------------
Confidence 8888887765 2356999999999999999999999873 7999999999999999999998772
Q ss_pred ccccCCCCCeeecCchhhhcCCCCCCCCCChhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcC
Q 027767 82 ATATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQ 161 (219)
Q Consensus 82 ~~~~~~~~~~~~~~~l~E~~g~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~ 161 (219)
.....+ + ++ . .|++ . ..-+.+.++.+.+ .
T Consensus 72 ------~~~~~~----------~---------------~~-----l---------~p~~-d----~~~~l~~l~~~~d-~ 100 (163)
T COG2062 72 ------EKKVEV----------F---------------EE-----L---------LPNG-D----PGTVLDYLEALGD-G 100 (163)
T ss_pred ------ccccee----------c---------------cc-----c---------CCCC-C----HHHHHHHHHHhcc-c
Confidence 000100 0 00 0 0000 0 1233344444433 3
Q ss_pred CCeEEEEeCHHHHHHHHHHhhcCCCCCCCCccCCCCCCceeEEehHHH
Q 027767 162 EKEIAVVSHGIFLQQTLNALLNDCQTSPNQELCPRSASTNYIFNNFLF 209 (219)
Q Consensus 162 ~~~ilivtH~~~i~~~~~~l~~~~~~~~~~~~~~~~~N~~v~~~~~~~ 209 (219)
-.+++||+|-..+..++..+.+. ..+...|+-+++..++|+.
T Consensus 101 v~~vllVgH~P~l~~l~~~L~~~------~~~~~~fptsgia~l~~~~ 142 (163)
T COG2062 101 VGSVLLVGHNPLLEELALLLAGG------ARLPVKFPTSGIAVLEFDG 142 (163)
T ss_pred CceEEEECCCccHHHHHHHHccc------cccccCCCcccEEEEEecc
Confidence 46899999999999999888774 2234688888999998884
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.38 E-value=0.00019 Score=58.17 Aligned_cols=50 Identities=26% Similarity=0.195 Sum_probs=41.5
Q ss_pred CCCChhHHHHHHHHHHHHHHcCC--------CCCCCEEEEcCcHHHHHHHHHhhcCCC
Q 027767 18 AHLSPLGWQQVGNLRKRVEASGL--------TQKIDLVITSPLLRTLQTAVGVFGGDG 67 (219)
Q Consensus 18 ~~Lt~~G~~QA~~l~~~l~~~~~--------~~~~~~i~sSpl~Ra~qTa~~i~~~~~ 67 (219)
..||+.|.+|+..+|++|+.... ....-.+++|+..||++||..++.++.
T Consensus 17 ~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~gl~ 74 (242)
T cd07061 17 GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLAGLF 74 (242)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHHhcC
Confidence 68999999999999999987321 112338899999999999999999884
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=95.28 E-value=0.013 Score=49.39 Aligned_cols=50 Identities=26% Similarity=0.242 Sum_probs=40.5
Q ss_pred CCCChhHHHHHHHHHHHHHHcCC---CC----CCCEEEEcCcHHHHHHHHHhhcCCC
Q 027767 18 AHLSPLGWQQVGNLRKRVEASGL---TQ----KIDLVITSPLLRTLQTAVGVFGGDG 67 (219)
Q Consensus 18 ~~Lt~~G~~QA~~l~~~l~~~~~---~~----~~~~i~sSpl~Ra~qTa~~i~~~~~ 67 (219)
..||+.|.+|...+|++|+.... .. .--.|++|...||++||..++.++.
T Consensus 61 g~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl~ 117 (347)
T PF00328_consen 61 GQLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGLY 117 (347)
T ss_dssp TSBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHHh
Confidence 34999999999999999998421 11 2237899999999999999998874
No 38
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=95.27 E-value=0.03 Score=49.20 Aligned_cols=50 Identities=22% Similarity=0.164 Sum_probs=40.3
Q ss_pred CCCChhHHHHHHHHHHHHHH---cCC---C----CCCCEEEEcCcHHHHHHHHHhhcCCC
Q 027767 18 AHLSPLGWQQVGNLRKRVEA---SGL---T----QKIDLVITSPLLRTLQTAVGVFGGDG 67 (219)
Q Consensus 18 ~~Lt~~G~~QA~~l~~~l~~---~~~---~----~~~~~i~sSpl~Ra~qTa~~i~~~~~ 67 (219)
-.||+.|.+|+.+||++|++ ... . .+--.|.||+..||+.||..++.++.
T Consensus 69 GqLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGlf 128 (411)
T KOG3720|consen 69 GQLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGLF 128 (411)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhhC
Confidence 46999999999999999998 321 1 11126779999999999999998884
No 39
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=95.09 E-value=0.022 Score=52.68 Aligned_cols=49 Identities=18% Similarity=0.062 Sum_probs=39.9
Q ss_pred CCCChhHHHHHHHHHHHHHHcCC----------C---CCCCEEEEcCcHHHHHHHHHhhcCC
Q 027767 18 AHLSPLGWQQVGNLRKRVEASGL----------T---QKIDLVITSPLLRTLQTAVGVFGGD 66 (219)
Q Consensus 18 ~~Lt~~G~~QA~~l~~~l~~~~~----------~---~~~~~i~sSpl~Ra~qTa~~i~~~~ 66 (219)
-.||..|+.||+.||++|+.... . ...-+||+|.-.|.+.||+++++++
T Consensus 510 GelT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 510 GELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred CEecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 35899999999999999997421 0 1122899999999999999999876
No 40
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=89.87 E-value=0.48 Score=41.69 Aligned_cols=52 Identities=19% Similarity=0.089 Sum_probs=39.6
Q ss_pred cCCCCChhHHHHHHHHHHHHHHc----CCCC-----C--CCEEEEcCcHHHHHHHHHhhcCCC
Q 027767 16 FDAHLSPLGWQQVGNLRKRVEAS----GLTQ-----K--IDLVITSPLLRTLQTAVGVFGGDG 67 (219)
Q Consensus 16 ~D~~Lt~~G~~QA~~l~~~l~~~----~~~~-----~--~~~i~sSpl~Ra~qTa~~i~~~~~ 67 (219)
..-.||++|.++-..+|++++.. ++.. . .-.|++++..||++||+.++..+.
T Consensus 67 ~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~~~~RT~~Sa~afl~Gl~ 129 (413)
T PRK10173 67 PGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYANSLQRTVATAQFFITGAF 129 (413)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeCCchHHHHHHHHHHHhcC
Confidence 45679999999999999977652 2211 1 236789999999999999987764
No 41
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=89.04 E-value=0.54 Score=41.55 Aligned_cols=52 Identities=21% Similarity=0.104 Sum_probs=39.6
Q ss_pred CCCCChhHHHHHHHHHHHHHHcC----CCC-----CCC--EEEEcCcHHHHHHHHHhhcCCCC
Q 027767 17 DAHLSPLGWQQVGNLRKRVEASG----LTQ-----KID--LVITSPLLRTLQTAVGVFGGDGE 68 (219)
Q Consensus 17 D~~Lt~~G~~QA~~l~~~l~~~~----~~~-----~~~--~i~sSpl~Ra~qTa~~i~~~~~~ 68 (219)
.-.||++|.+|...+|+++++.. +.. .++ .|++++..||+.||+.++.++.-
T Consensus 70 ~GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~GlyP 132 (436)
T PRK10172 70 LGWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGLAP 132 (436)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhcCC
Confidence 46799999999999999888742 111 122 67788889999999999877743
No 42
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=76.25 E-value=8.2 Score=32.58 Aligned_cols=44 Identities=18% Similarity=0.133 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhhcCCCC
Q 027767 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQT 187 (219)
Q Consensus 144 ~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~~~~~~l~~~~~~ 187 (219)
..+.+|+..++..+..+++++|+|++||..-..++..+-....+
T Consensus 174 ~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~ 217 (310)
T PF12048_consen 174 ERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPP 217 (310)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCc
Confidence 45778888888888777888899999999888777777664433
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=60.79 E-value=14 Score=32.12 Aligned_cols=50 Identities=22% Similarity=0.104 Sum_probs=38.3
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCC---------CCC--EEEEcCcHHHHHHHHHhhcCC
Q 027767 17 DAHLSPLGWQQVGNLRKRVEASGLTQ---------KID--LVITSPLLRTLQTAVGVFGGD 66 (219)
Q Consensus 17 D~~Lt~~G~~QA~~l~~~l~~~~~~~---------~~~--~i~sSpl~Ra~qTa~~i~~~~ 66 (219)
=-.||.+|.-|-..+|+.|++..... ..+ .|+|+-..|+.|+|.+++=.+
T Consensus 166 ~G~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~lf~~ 226 (487)
T KOG3672|consen 166 SGMLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFLFLY 226 (487)
T ss_pred ccceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHHHHh
Confidence 34589999999999999998753211 122 589999999999999986433
No 44
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=58.15 E-value=11 Score=30.76 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 139 ~~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
..++..+...-+..|++.-.+..++.|++||+||+.
T Consensus 7 ~p~~~~d~~s~~~eFi~~q~s~~~rrIVlVTSGGTt 42 (302)
T KOG2728|consen 7 VPESLDDPGSLIEEFIKLQASLQGRRIVLVTSGGTT 42 (302)
T ss_pred CcccccchhHHHHHHHHHHhhccCceEEEEecCCeE
Confidence 345555555556777776655567789999999874
No 45
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=56.86 E-value=12 Score=28.99 Aligned_cols=31 Identities=26% Similarity=0.143 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHHHHhhc-CCCeEEEEeCHH
Q 027767 142 PFEEVTARGMEFMKWLWTR-QEKEIAVVSHGI 172 (219)
Q Consensus 142 s~~~~~~R~~~~~~~l~~~-~~~~ilivtH~~ 172 (219)
+..++.+|+..|++.|.+. ++..|++|+|-.
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~ 103 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVSPIP 103 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 5567899999999999876 688899999754
No 46
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=48.69 E-value=25 Score=31.33 Aligned_cols=55 Identities=18% Similarity=0.069 Sum_probs=42.7
Q ss_pred CCCcCCCCChhHHHHHHHHHHHHHHcC--C-CCCCCEEEEcCcHHHHHHHHHhhcCCC
Q 027767 13 QEFFDAHLSPLGWQQVGNLRKRVEASG--L-TQKIDLVITSPLLRTLQTAVGVFGGDG 67 (219)
Q Consensus 13 ~~~~D~~Lt~~G~~QA~~l~~~l~~~~--~-~~~~~~i~sSpl~Ra~qTa~~i~~~~~ 67 (219)
..-.+..|...|+..|.++++.+-+.- + ....-.|+++...||.+||+....++.
T Consensus 126 ~~~~~~~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GLf 183 (467)
T KOG1382|consen 126 EAELVDQLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGLF 183 (467)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhhc
Confidence 344567788999999999999877642 1 112337899999999999999998886
No 47
>PRK00865 glutamate racemase; Provisional
Probab=46.63 E-value=1.4e+02 Score=24.44 Aligned_cols=61 Identities=16% Similarity=0.242 Sum_probs=43.5
Q ss_pred CCC-hhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHH
Q 027767 109 RRS-ISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGI 172 (219)
Q Consensus 109 g~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~ 172 (219)
|++ ..++.+.+|+.++-.+- |.-.-|.+..|.+++.+|+.+.++++.+.+-+-|+|-|-..
T Consensus 17 GLtvl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d~iVIaCNTa 78 (261)
T PRK00865 17 GLTVLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGVKMLVIACNTA 78 (261)
T ss_pred HHHHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEeCchH
Confidence 444 56778888987665553 23345666779999999999999999876666666666553
No 48
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=45.40 E-value=37 Score=27.39 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHH
Q 027767 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 179 (219)
Q Consensus 145 ~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~~~~~ 179 (219)
+-...+...+..+.++.+.+|++|||-..+.....
T Consensus 176 ~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~d 210 (226)
T COG1136 176 KTAKEVLELLRELNKERGKTIIMVTHDPELAKYAD 210 (226)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCC
Confidence 34566677777776666889999999988876543
No 49
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=42.89 E-value=39 Score=27.64 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 176 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i~~ 176 (219)
...+++.+.+|+++...+|++|||.--=..
T Consensus 166 R~~lq~~l~~lw~~~~~TvllVTHdi~EAv 195 (248)
T COG1116 166 REELQDELLRLWEETRKTVLLVTHDVDEAV 195 (248)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHHHHH
Confidence 344667888888888899999999955443
No 50
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=41.94 E-value=32 Score=29.98 Aligned_cols=31 Identities=10% Similarity=0.303 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHHHhhcCCCeEEEEeCHH
Q 027767 142 PFEEVTARGMEFMKWLWTRQEKEIAVVSHGI 172 (219)
Q Consensus 142 s~~~~~~R~~~~~~~l~~~~~~~ilivtH~~ 172 (219)
...++..++++.++.+.+..++.|+||+|+.
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~~~kv~li~HSm 128 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSM 128 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 4557788888888888766688999999973
No 51
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=38.96 E-value=9.4 Score=31.60 Aligned_cols=51 Identities=14% Similarity=0.090 Sum_probs=40.9
Q ss_pred CcCCCCChhHHHHHHHHHHHHHHcCCCCCCCE-EEEcCcHHHHHHHHHhhcCC
Q 027767 15 FFDAHLSPLGWQQVGNLRKRVEASGLTQKIDL-VITSPLLRTLQTAVGVFGGD 66 (219)
Q Consensus 15 ~~D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~-i~sSpl~Ra~qTa~~i~~~~ 66 (219)
..|+++.+.|...+..++++.+.... .++|. |..|+..||++|+..++.+.
T Consensus 38 ~~~~~y~~~d~n~p~~l~qr~~~~~~-y~~d~pit~~g~~~~~~~gr~l~~a~ 89 (272)
T KOG3734|consen 38 RPDGKYVPDDMNMPFRLPQRIRSPKG-YPIDPPITVSGFIQCKLIGRELLNAG 89 (272)
T ss_pred CCCCCcCCCCccCCccccccccCccc-CccCCCccchhHHHHHHHHHHHHhcC
Confidence 34788999999999999988544211 46776 99999999999999998766
No 52
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=38.20 E-value=78 Score=26.40 Aligned_cols=63 Identities=24% Similarity=0.209 Sum_probs=35.8
Q ss_pred CCChhHHHhhCCCCccccccccCC-----CCCCCC---CCCCHH--H--HHHHHHHHHHHHhhcCCCeEEEEeCHH
Q 027767 109 RRSISEYHSLFPAIDFKLIESEDD-----KLWKAD---AREPFE--E--VTARGMEFMKWLWTRQEKEIAVVSHGI 172 (219)
Q Consensus 109 g~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~---~~Es~~--~--~~~R~~~~~~~l~~~~~~~ilivtH~~ 172 (219)
|+++.++..+||.- ++.-....- ....|+ -.|++. | ....+++-+..+.+.-+++|++|||-.
T Consensus 122 gL~p~~~~~RyP~e-LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDi 196 (309)
T COG1125 122 GLDPSEYADRYPHE-LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDI 196 (309)
T ss_pred CCCHHHHhhcCchh-cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCH
Confidence 77888888888853 443322100 001111 023332 2 234566777777767789999999973
No 53
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=33.45 E-value=50 Score=23.46 Aligned_cols=18 Identities=33% Similarity=0.493 Sum_probs=13.0
Q ss_pred eEEEEeCHHHHHHHHHHh
Q 027767 164 EIAVVSHGIFLQQTLNAL 181 (219)
Q Consensus 164 ~ilivtH~~~i~~~~~~l 181 (219)
.++|+|||.+-..+...+
T Consensus 2 ~ili~sHG~~A~gi~~~~ 19 (122)
T cd00006 2 GIIIATHGGFASGLLNSA 19 (122)
T ss_pred eEEEEcCHHHHHHHHHHH
Confidence 489999998766555443
No 54
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=33.27 E-value=37 Score=23.82 Aligned_cols=18 Identities=28% Similarity=0.438 Sum_probs=13.2
Q ss_pred eEEEEeCHHHHHHHHHHh
Q 027767 164 EIAVVSHGIFLQQTLNAL 181 (219)
Q Consensus 164 ~ilivtH~~~i~~~~~~l 181 (219)
.|+|+|||.+-..+...+
T Consensus 1 giii~sHG~~A~g~~~~~ 18 (116)
T PF03610_consen 1 GIIIASHGSLAEGLLESA 18 (116)
T ss_dssp EEEEEEETTHHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHH
Confidence 489999998866655544
No 55
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=33.14 E-value=73 Score=26.08 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 144 EEVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 144 ~~~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
..|.+++.+-+.++.++. ..|++|||..-
T Consensus 180 ~~F~~K~~~rl~e~~~~~-~tiv~VSHd~~ 208 (249)
T COG1134 180 AAFQEKCLERLNELVEKN-KTIVLVSHDLG 208 (249)
T ss_pred HHHHHHHHHHHHHHHHcC-CEEEEEECCHH
Confidence 457788888788776544 89999999843
No 56
>PF13479 AAA_24: AAA domain
Probab=33.03 E-value=78 Score=24.88 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=29.2
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHHHHH
Q 027767 140 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQ 175 (219)
Q Consensus 140 ~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~ 175 (219)
+--|.++..++.++++.+.+..+.+|++++|...-.
T Consensus 105 ~~~yg~~~~~~~~~i~~l~~~~~~~VI~tah~~~~~ 140 (213)
T PF13479_consen 105 GKGYGELQQEFMRFIDKLLNALGKNVIFTAHAKEEE 140 (213)
T ss_pred cchHHHHHHHHHHHHHHHHHHCCCcEEEEEEEEEEE
Confidence 556788888999999987766788999999986544
No 57
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=32.30 E-value=99 Score=24.65 Aligned_cols=40 Identities=18% Similarity=0.098 Sum_probs=25.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHH
Q 027767 139 AREPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTL 178 (219)
Q Consensus 139 ~~Es~~~~~~R~~~~~~~l~~~-~~~~ilivtH~~~i~~~~ 178 (219)
.++...++.++..+.++..... .++.+++|||-.+....+
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~ 180 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFI 180 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCCEEEEEcccchHHHh
Confidence 3445566666666666654433 567899999987665433
No 58
>PRK04946 hypothetical protein; Provisional
Probab=31.81 E-value=1.9e+02 Score=22.50 Aligned_cols=44 Identities=16% Similarity=0.012 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCH---HHHHHHHHHhhcC
Q 027767 140 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHG---IFLQQTLNALLND 184 (219)
Q Consensus 140 ~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~---~~i~~~~~~l~~~ 184 (219)
|-+..+....+..|+...... +...+.|-|| ++++..+..++..
T Consensus 102 G~~~eeA~~~L~~fl~~a~~~-g~r~v~IIHGkG~gvLk~~V~~wL~q 148 (181)
T PRK04946 102 GLTQLQAKQELGALIAACRKE-HVFCACVMHGHGKHILKQQTPLWLAQ 148 (181)
T ss_pred CCCHHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCHhHHHHHHHHHHcC
Confidence 567888888899999887653 4456778898 8999999999975
No 59
>COG2893 ManX Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]
Probab=31.30 E-value=54 Score=24.36 Aligned_cols=20 Identities=35% Similarity=0.507 Sum_probs=15.9
Q ss_pred eEEEEeCHHHHHHHHHHhhc
Q 027767 164 EIAVVSHGIFLQQTLNALLN 183 (219)
Q Consensus 164 ~ilivtH~~~i~~~~~~l~~ 183 (219)
.|+|+|||.+-..+++.+-.
T Consensus 3 ~iii~tHG~~A~~l~~s~em 22 (143)
T COG2893 3 GIIIATHGRFAEGLLNSLEM 22 (143)
T ss_pred eEEEEeCHHHHHHHHHHHHH
Confidence 58999999998887766543
No 60
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=31.12 E-value=34 Score=28.24 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=25.6
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHH
Q 027767 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQ 176 (219)
Q Consensus 139 ~~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~~ 176 (219)
...|..+..+++++.++...+. ...|++.+|||+|..
T Consensus 190 ~~~sl~~a~~~~~~i~~aa~~v-~~dii~l~hGGPI~~ 226 (268)
T PF09370_consen 190 TALSLEEAAERIQEIFDAARAV-NPDIIVLCHGGPIAT 226 (268)
T ss_dssp -S--HHHHHHHHHHHHHHHHCC--TT-EEEEECTTB-S
T ss_pred ccCCHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCCCCC
Confidence 4678899999999988887543 456899999999864
No 61
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=29.88 E-value=67 Score=29.93 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhc-CCCeEEEEeCHHH
Q 027767 140 REPFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIF 173 (219)
Q Consensus 140 ~Es~~~~~~R~~~~~~~l~~~-~~~~ilivtH~~~ 173 (219)
.|...++..|++..++.+.+. .++.|+||+|+.=
T Consensus 189 le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMG 223 (642)
T PLN02517 189 TEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMG 223 (642)
T ss_pred hhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCc
Confidence 466678889999999988765 4688999999843
No 62
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=27.77 E-value=1e+02 Score=24.02 Aligned_cols=29 Identities=28% Similarity=0.262 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...++.+.+.++.+..+..|+++||-...
T Consensus 175 ~~~~l~~~l~~~~~~~~~tii~~sH~~~~ 203 (218)
T cd03255 175 TGKEVMELLRELNKEAGTTIVVVTHDPEL 203 (218)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCHHH
Confidence 34556677777654346789999998643
No 63
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=26.52 E-value=1.2e+02 Score=22.91 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
..++.+.+.++.++.+..++++||-.-
T Consensus 136 ~~~l~~~l~~~~~~~~~tiii~sH~~~ 162 (178)
T cd03229 136 RREVRALLKSLQAQLGITVVLVTHDLD 162 (178)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 455667777765544679999999854
No 64
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=26.48 E-value=1.1e+02 Score=23.93 Aligned_cols=27 Identities=22% Similarity=0.308 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+++.++....+..|+++||-..
T Consensus 167 ~~~~~~~l~~~~~~~~~tiii~sH~~~ 193 (220)
T cd03293 167 REQLQEELLDIWRETGKTVLLVTHDID 193 (220)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 455666666665445679999999864
No 65
>PLN02449 ferrochelatase
Probab=26.48 E-value=1.7e+02 Score=26.49 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=28.9
Q ss_pred CCCCChhHHHHHHHHHHHHHHcCCCCCCCEE----EEcCcHHHHHHHHHhhc
Q 027767 17 DAHLSPLGWQQVGNLRKRVEASGLTQKIDLV----ITSPLLRTLQTAVGVFG 64 (219)
Q Consensus 17 D~~Lt~~G~~QA~~l~~~l~~~~~~~~~~~i----~sSpl~Ra~qTa~~i~~ 64 (219)
-+||...-.+||+.+.+.|...+. .+... |..|+. -++.+.+.+
T Consensus 155 gSPL~~iT~~Qa~~Lq~~L~~~~~--~~~V~~aMRY~~P~i--edal~~l~~ 202 (485)
T PLN02449 155 GSPLRKITDEQAEALAKALEAKNL--PAKVYVGMRYWHPFT--EEAIDQIKA 202 (485)
T ss_pred CCchHHHHHHHHHHHHHHHhccCC--CeEEEEhhhcCCCCH--HHHHHHHHh
Confidence 479999999999999999976421 12211 456654 345555543
No 66
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=26.45 E-value=1.2e+02 Score=24.16 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 145 ~~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
.+.+-+...+..+..+.+-++++|||..-
T Consensus 163 ~LR~eMl~Lv~~l~~E~~~TllmVTH~~~ 191 (231)
T COG3840 163 ALRAEMLALVSQLCDERKMTLLMVTHHPE 191 (231)
T ss_pred HHHHHHHHHHHHHHHhhCCEEEEEeCCHH
Confidence 45566777788887777789999999854
No 67
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=26.31 E-value=3.5e+02 Score=21.92 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=41.0
Q ss_pred CCC-hhHHHhhCCCCccccccccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-hcCCCeEEEEeCH
Q 027767 109 RRS-ISEYHSLFPAIDFKLIESEDDKLWKADAREPFEEVTARGMEFMKWLW-TRQEKEIAVVSHG 171 (219)
Q Consensus 109 g~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Es~~~~~~R~~~~~~~l~-~~~~~~ilivtH~ 171 (219)
|++ ..++.+.+|..++-.+- |.-+-|.+.-|.+++..++.+.++++. +.+-+.|+|-|..
T Consensus 10 Gltv~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~d~ivIaCNT 71 (251)
T TIGR00067 10 GLSVLKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNIKLLVVACNT 71 (251)
T ss_pred HHHHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence 444 56677888876565442 233556667799999999999999998 5555556655543
No 68
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=26.24 E-value=1.3e+02 Score=21.28 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=25.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeC---HHHHHHHH
Q 027767 139 AREPFEEVTARGMEFMKWLWTRQEKEIAVVSH---GIFLQQTL 178 (219)
Q Consensus 139 ~~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH---~~~i~~~~ 178 (219)
.+++..++.+|+.++++.+- .++.|+|+|- |.+-..++
T Consensus 37 ~~~~~~~~~~~l~~~i~~~~--~~~~vivltDl~GGSp~n~a~ 77 (116)
T TIGR00824 37 PGENAETLQEKYNAALADLD--TEEEVLFLVDIFGGSPYNAAA 77 (116)
T ss_pred CCcCHHHHHHHHHHHHHhcC--CCCCEEEEEeCCCCCHHHHHH
Confidence 46788999999999999872 3445666664 44444443
No 69
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=26.23 E-value=94 Score=25.12 Aligned_cols=27 Identities=26% Similarity=0.303 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+....+.+|+++||-.-
T Consensus 174 ~~~l~~~l~~L~~~~~~tii~~tHd~~ 200 (235)
T COG1122 174 RRELLELLKKLKEEGGKTIIIVTHDLE 200 (235)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCcHH
Confidence 344667777776656789999999844
No 70
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=25.56 E-value=77 Score=25.75 Aligned_cols=34 Identities=15% Similarity=0.034 Sum_probs=22.9
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHHHHH
Q 027767 140 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQ 175 (219)
Q Consensus 140 ~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~ 175 (219)
..|+.+..+|+.+.+..+ .+++..++|||+++..
T Consensus 126 i~s~~eA~~~ive~~~~~--~~~~~~VliaH~~~~G 159 (238)
T cd07397 126 VISLEESAQRIIAAAKKA--PPDLPLILLAHNGPSG 159 (238)
T ss_pred CCCHHHHHHHHHHHhhhc--CCCCCeEEEeCcCCcC
Confidence 456777777776666422 3566789999998754
No 71
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=25.55 E-value=1.2e+02 Score=24.56 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
..++.+.+.++....+..|++|||-...
T Consensus 151 ~~~l~~~l~~~~~~~~~tiiivsHd~~~ 178 (246)
T cd03237 151 RLMASKVIRRFAENNEKTAFVVEHDIIM 178 (246)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 4456667777665557899999999553
No 72
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=25.29 E-value=1e+02 Score=25.35 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeCHH
Q 027767 148 ARGMEFMKWLWTRQEKEIAVVSHGI 172 (219)
Q Consensus 148 ~R~~~~~~~l~~~~~~~ilivtH~~ 172 (219)
..+.+.++++.++ +..|++|||-.
T Consensus 176 ~~i~~lL~~l~~e-g~tIl~vtHDL 199 (254)
T COG1121 176 KEIYDLLKELRQE-GKTVLMVTHDL 199 (254)
T ss_pred HHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 4455666777655 88999999973
No 73
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=25.02 E-value=1.4e+02 Score=22.80 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...+.+.+..+..+.+..|+++||-...
T Consensus 107 ~~~l~~~l~~~~~~~~~tiiivsH~~~~ 134 (177)
T cd03222 107 RLNAARAIRRLSEEGKKTALVVEHDLAV 134 (177)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCHHH
Confidence 4455666666654444789999998643
No 74
>PRK00035 hemH ferrochelatase; Reviewed
Probab=24.90 E-value=2.3e+02 Score=23.93 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHH
Q 027767 146 VTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQ 176 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~-~~~~ilivtH~~~i~~ 176 (219)
+.+|+.+.+...-.. .+..++++.||...+.
T Consensus 172 l~~~I~~~~~~~~~~~~~~~llfs~HG~P~~~ 203 (333)
T PRK00035 172 LAESIREALAKHGEDPEPDRLLFSAHGLPQRY 203 (333)
T ss_pred HHHHHHHHHHhcCcccCCcEEEEecCCCchHH
Confidence 456666666544211 2457999999966554
No 75
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=24.89 E-value=1.2e+02 Score=23.48 Aligned_cols=28 Identities=18% Similarity=-0.034 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...++.+.+..+.++.+..|+++||-..
T Consensus 165 ~~~~l~~~l~~~~~~~~~tii~~sH~~~ 192 (213)
T cd03259 165 LREELREELKELQRELGITTIYVTHDQE 192 (213)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 3455666666665444678999999854
No 76
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=24.46 E-value=1.3e+02 Score=23.86 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
....+.+++..+.++.+..|+++||-..
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~ 215 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMK 215 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHH
Confidence 3455666777665545679999999965
No 77
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=24.32 E-value=1.2e+02 Score=23.96 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-.-
T Consensus 172 ~~~l~~~l~~~~~~~~~tvi~vsH~~~ 198 (235)
T cd03261 172 SGVIDDLIRSLKKELGLTSIMVTHDLD 198 (235)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCHH
Confidence 455566666665444678999999864
No 78
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=24.20 E-value=1.2e+02 Score=23.96 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
..++.+.+.++.++.+..|+++||-.-
T Consensus 172 ~~~l~~~l~~~~~~~~~tvii~sH~~~ 198 (239)
T cd03296 172 RKELRRWLRRLHDELHVTTVFVTHDQE 198 (239)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 455566666665444679999999864
No 79
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=24.05 E-value=1.3e+02 Score=22.78 Aligned_cols=25 Identities=8% Similarity=0.235 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHG 171 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~ 171 (219)
...++.+.+.++.+ .+..|+++||-
T Consensus 162 ~~~~~~~~l~~~~~-~~~tili~sH~ 186 (190)
T TIGR01166 162 GREQMLAILRRLRA-EGMTVVISTHD 186 (190)
T ss_pred HHHHHHHHHHHHHH-cCCEEEEEeec
Confidence 34566667776644 46799999995
No 80
>PRK12435 ferrochelatase; Provisional
Probab=24.00 E-value=3.5e+02 Score=22.87 Aligned_cols=21 Identities=19% Similarity=0.161 Sum_probs=18.5
Q ss_pred CCCCChhHHHHHHHHHHHHHH
Q 027767 17 DAHLSPLGWQQVGNLRKRVEA 37 (219)
Q Consensus 17 D~~Lt~~G~~QA~~l~~~l~~ 37 (219)
-+||...-++||+++.+.|..
T Consensus 52 ~SPL~~~T~~qa~~L~~~L~~ 72 (311)
T PRK12435 52 ISPLAKITDEQAKALEKALNE 72 (311)
T ss_pred cChHHHHHHHHHHHHHHHHhh
Confidence 369999999999999999976
No 81
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=23.58 E-value=1.3e+02 Score=23.90 Aligned_cols=27 Identities=11% Similarity=0.225 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-..
T Consensus 181 ~~~l~~~l~~~~~~~~~tiii~tH~~~ 207 (243)
T TIGR02315 181 SKQVMDYLKRINKEDGITVIINLHQVD 207 (243)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 445556666665444678999999854
No 82
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=23.39 E-value=1.3e+02 Score=23.70 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-..
T Consensus 180 ~~~l~~~l~~~~~~~~~tii~~tH~~~ 206 (241)
T cd03256 180 SRQVMDLLKRINREEGITVIVSLHQVD 206 (241)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 345556666665445678999999854
No 83
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=23.30 E-value=1.4e+02 Score=23.33 Aligned_cols=27 Identities=19% Similarity=0.136 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+....+..|+++||-..
T Consensus 177 ~~~l~~~l~~~~~~~~~tii~~tH~~~ 203 (221)
T TIGR02211 177 AKIIFDLMLELNRELNTSFLVVTHDLE 203 (221)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 445556666665444679999999854
No 84
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=23.10 E-value=1.4e+02 Score=22.34 Aligned_cols=27 Identities=22% Similarity=0.110 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...++.+.+..+.++ +..++++||-..
T Consensus 130 ~~~~l~~~l~~~~~~-g~tiii~th~~~ 156 (173)
T cd03230 130 SRREFWELLRELKKE-GKTILLSSHILE 156 (173)
T ss_pred HHHHHHHHHHHHHHC-CCEEEEECCCHH
Confidence 345666777777554 678999999854
No 85
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=22.75 E-value=93 Score=22.54 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=11.7
Q ss_pred eEEEEeCH-HHHHHHHHHh
Q 027767 164 EIAVVSHG-IFLQQTLNAL 181 (219)
Q Consensus 164 ~ilivtH~-~~i~~~~~~l 181 (219)
-|+||||| .+-..++..+
T Consensus 3 GIVlVSHs~~lA~gl~~~~ 21 (124)
T PRK14484 3 GIVIVSHSKKIAEGVKDLI 21 (124)
T ss_pred eEEEEeCcHHHHHHHHHHH
Confidence 48999999 5544444433
No 86
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.75 E-value=1.4e+02 Score=23.59 Aligned_cols=27 Identities=11% Similarity=0.148 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-.-
T Consensus 176 ~~~l~~~l~~~~~~~~~tvii~sH~~~ 202 (233)
T cd03258 176 TQSILALLRDINRELGLTIVLITHEME 202 (233)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 345556666665544679999999853
No 87
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=22.74 E-value=1.4e+02 Score=23.39 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+.++.++.+..|+++||-..
T Consensus 181 ~~~l~~~l~~~~~~~~~tii~~sH~~~ 207 (228)
T cd03257 181 QAQILDLLKKLQEELGLTLLFITHDLG 207 (228)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 455666666665444679999999854
No 88
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=22.68 E-value=1e+02 Score=25.67 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFLQ 175 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i~ 175 (219)
...++.+.+..+.. .+..|++||||..-.
T Consensus 32 ~l~~l~~~i~~l~~-~g~~vilVssGAv~~ 60 (284)
T cd04256 32 RLASIVEQVSELQS-QGREVILVTSGAVAF 60 (284)
T ss_pred HHHHHHHHHHHHHH-CCCEEEEEeeCcHHh
Confidence 34444444444433 467899999997643
No 89
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=22.60 E-value=1.4e+02 Score=24.15 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
....+.+.+..+....+..|+++||-.-
T Consensus 163 ~~~~l~~~L~~~~~~~g~tviivsH~~~ 190 (255)
T PRK11248 163 TREQMQTLLLKLWQETGKQVLLITHDIE 190 (255)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 3455666677665445678999999864
No 90
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=22.44 E-value=1.5e+02 Score=22.98 Aligned_cols=26 Identities=19% Similarity=0.095 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 148 ARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 148 ~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
..+.+.+.++..+.+..|+++||-.-
T Consensus 167 ~~l~~~l~~~~~~~~~tvi~~sH~~~ 192 (213)
T cd03301 167 VQMRAELKRLQQRLGTTTIYVTHDQV 192 (213)
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 44556666665444679999999853
No 91
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=22.19 E-value=1.5e+02 Score=23.46 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-..
T Consensus 150 ~~~l~~~l~~~~~~~~~tii~~sH~~~ 176 (230)
T TIGR01184 150 RGNLQEELMQIWEEHRVTVLMVTHDVD 176 (230)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 455666666665445678999999865
No 92
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=22.11 E-value=1.5e+02 Score=23.44 Aligned_cols=27 Identities=15% Similarity=-0.048 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+.++.++.+.+|+|+||-..
T Consensus 166 ~~~l~~~l~~~~~~~~~tiii~sh~~~ 192 (232)
T cd03300 166 RKDMQLELKRLQKELGITFVFVTHDQE 192 (232)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 345556666665444779999999975
No 93
>COG1930 CbiN ABC-type cobalt transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=22.02 E-value=1.1e+02 Score=20.92 Aligned_cols=29 Identities=14% Similarity=0.277 Sum_probs=21.2
Q ss_pred CCCChhHHHhhCCCCccccccccCCCCCCCCCCC
Q 027767 108 KRRSISEYHSLFPAIDFKLIESEDDKLWKADARE 141 (219)
Q Consensus 108 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~E 141 (219)
.+..-+.|.+.-|. ++.|+. +.|.||.+|
T Consensus 35 D~~Ae~~I~ei~p~--YePWF~---Pl~EPpSGE 63 (97)
T COG1930 35 DGEAEEVITEIKPG--YEPWFQ---PLWEPPSGE 63 (97)
T ss_pred cchhhHHHHHhCCC--CCcccc---cccCCCCcc
Confidence 46667777777776 788874 568888776
No 94
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=21.98 E-value=1.5e+02 Score=23.36 Aligned_cols=28 Identities=21% Similarity=0.201 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...+.+.+.++....+..|+++||-.-.
T Consensus 181 ~~~l~~~l~~~~~~~g~tvii~sH~~~~ 208 (233)
T PRK11629 181 ADSIFQLLGELNRLQGTAFLVVTHDLQL 208 (233)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 4455566666654456799999998543
No 95
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=21.80 E-value=1.4e+02 Score=24.22 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGI 172 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~ 172 (219)
...+.+.+..+.++.+..|+++||-.
T Consensus 179 ~~~l~~~l~~~~~~~g~tiiivsH~~ 204 (269)
T PRK11831 179 MGVLVKLISELNSALGVTCVVVSHDV 204 (269)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCH
Confidence 44556666666544467999999984
No 96
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.74 E-value=1.4e+02 Score=23.64 Aligned_cols=28 Identities=29% Similarity=0.188 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...++.+.+..+.++.+..|+++||-.-
T Consensus 170 ~~~~l~~~L~~~~~~~g~tvii~sH~~~ 197 (242)
T cd03295 170 TRDQLQEEFKRLQQELGKTIVFVTHDID 197 (242)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 3455666666665444678999999864
No 97
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=21.58 E-value=1.5e+02 Score=24.09 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...+.+.+.++.+..+.+|+++||-...
T Consensus 186 ~~~l~~~l~~~~~~~g~tiiivsH~~~~ 213 (265)
T TIGR02769 186 QAVILELLRKLQQAFGTAYLFITHDLRL 213 (265)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEeCCHHH
Confidence 4556677777655446799999998654
No 98
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=21.46 E-value=1.5e+02 Score=22.92 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++.+..|+++||-.-
T Consensus 167 ~~~l~~~l~~~~~~~~~tiii~sH~~~ 193 (214)
T cd03297 167 RLQLLPELKQIKKNLNIPVIFVTHDLS 193 (214)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCHH
Confidence 344556666665444678999999864
No 99
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.43 E-value=2.1e+02 Score=23.05 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 179 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i~~~~~ 179 (219)
..+|++..+-.+++..++-+++|||+.--..++.
T Consensus 167 tRe~mQelLldlw~~tgk~~lliTH~ieEAlfla 200 (259)
T COG4525 167 TREQMQELLLDLWQETGKQVLLITHDIEEALFLA 200 (259)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhh
Confidence 4567888888888888899999999965544443
No 100
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=21.36 E-value=1.6e+02 Score=23.27 Aligned_cols=28 Identities=11% Similarity=0.151 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
..++.+.+..+.++.+..|+++||-...
T Consensus 165 ~~~~~~~l~~~~~~~~~tiii~sH~~~~ 192 (232)
T PRK10771 165 RQEMLTLVSQVCQERQLTLLMVSHSLED 192 (232)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence 3456666766655446799999999763
No 101
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=21.35 E-value=1.5e+02 Score=24.39 Aligned_cols=27 Identities=33% Similarity=0.401 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
..++.+.+..+..+.+.+|+++||-.-
T Consensus 181 ~~~l~~~l~~l~~~~g~tvl~vtH~~~ 207 (286)
T PRK13646 181 KRQVMRLLKSLQTDENKTIILVSHDMN 207 (286)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 455667777775555789999999965
No 102
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=21.25 E-value=1.6e+02 Score=23.10 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
....+.+.+.++..+.+..|+++||-...
T Consensus 181 ~~~~l~~~l~~~~~~~~~tii~~sH~~~~ 209 (228)
T PRK10584 181 TGDKIADLLFSLNREHGTTLILVTHDLQL 209 (228)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 34556666666654446799999999653
No 103
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=21.24 E-value=1.6e+02 Score=22.66 Aligned_cols=26 Identities=27% Similarity=0.328 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+.++ +..|+++||-.-
T Consensus 170 ~~~~~~~l~~~~~~-~~tvi~~sH~~~ 195 (211)
T cd03225 170 RRELLELLKKLKAE-GKTIIIVTHDLD 195 (211)
T ss_pred HHHHHHHHHHHHHc-CCEEEEEeCCHH
Confidence 45556666666543 678999999854
No 104
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.22 E-value=2.6e+02 Score=22.02 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCHHHHHHHHH
Q 027767 140 REPFEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLN 179 (219)
Q Consensus 140 ~Es~~~~~~R~~~~~~~l~~~~~~~ilivtH~~~i~~~~~ 179 (219)
+----.+.+|..+.+..+...-+=.++||||-.....+++
T Consensus 180 GGLDVSVQARLLDllrgLv~~l~la~viVTHDl~VarLla 219 (258)
T COG4107 180 GGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLA 219 (258)
T ss_pred CCcchhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhh
Confidence 3333456789999999887666667899999977655554
No 105
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=21.21 E-value=1.7e+02 Score=22.70 Aligned_cols=27 Identities=22% Similarity=0.227 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...++.+.+..+.+ .+..|+++||-..
T Consensus 167 ~~~~l~~~l~~~~~-~~~tvi~~sH~~~ 193 (213)
T cd03235 167 TQEDIYELLRELRR-EGMTILVVTHDLG 193 (213)
T ss_pred HHHHHHHHHHHHHh-cCCEEEEEeCCHH
Confidence 34556666666654 4678999999854
No 106
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=21.13 E-value=2.4e+02 Score=22.56 Aligned_cols=42 Identities=19% Similarity=0.103 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhc
Q 027767 142 PFEEVTARGMEFMKWLWTR-QEKEIAVVSHGIFLQQTLNALLN 183 (219)
Q Consensus 142 s~~~~~~R~~~~~~~l~~~-~~~~ilivtH~~~i~~~~~~l~~ 183 (219)
+.........+++..+.+. ..++|-|++|+.=-+.++..+..
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred hHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHH
Confidence 4444556677888888776 67899999999776666665544
No 107
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=21.00 E-value=1.3e+02 Score=25.40 Aligned_cols=39 Identities=15% Similarity=0.104 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHH-HHHHHHHhhcC
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIF-LQQTLNALLND 184 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~-i~~~~~~l~~~ 184 (219)
..+|+++|+++..+..+-+|++.||-.. |..+...++..
T Consensus 191 aq~~ir~Flke~n~~~~aTVllTTH~~~di~~lc~rv~~I 230 (325)
T COG4586 191 AQANIREFLKEYNEERQATVLLTTHIFDDIATLCDRVLLI 230 (325)
T ss_pred HHHHHHHHHHHHHHhhCceEEEEecchhhHHHhhhheEEe
Confidence 4678999999998777889999999754 66777776654
No 108
>PF13175 AAA_15: AAA ATPase domain
Probab=20.71 E-value=1.5e+02 Score=25.45 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 145 EVTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 145 ~~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
.+..-+.+++..+....+.-|++.||+..|
T Consensus 385 ~~q~~~~~~L~~~~~~~~~QiiitTHSp~i 414 (415)
T PF13175_consen 385 QAQRKFIDFLKKLSKNNNIQIIITTHSPFI 414 (415)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEECCChhh
Confidence 344556666766665456679999999765
No 109
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=20.69 E-value=1.5e+02 Score=22.58 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=15.8
Q ss_pred CCCeEEEEeCHHHHHHHHHHh
Q 027767 161 QEKEIAVVSHGIFLQQTLNAL 181 (219)
Q Consensus 161 ~~~~ilivtH~~~i~~~~~~l 181 (219)
-++++++|+||--.-+++..+
T Consensus 53 ~~~~~ilVaHSLGc~~~l~~l 73 (171)
T PF06821_consen 53 IDEPTILVAHSLGCLTALRWL 73 (171)
T ss_dssp -TTTEEEEEETHHHHHHHHHH
T ss_pred cCCCeEEEEeCHHHHHHHHHH
Confidence 355799999997777777666
No 110
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=20.61 E-value=1.7e+02 Score=22.71 Aligned_cols=27 Identities=15% Similarity=0.335 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+.++.++.+..|+++||-..
T Consensus 164 ~~~~~~~l~~~~~~~~~tii~vsh~~~ 190 (213)
T TIGR01277 164 REEMLALVKQLCSERQRTLLMVTHHLS 190 (213)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 344556666665444678999999964
No 111
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.54 E-value=1.7e+02 Score=22.78 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+..+..+.+..|+++||-..
T Consensus 167 ~~~l~~~l~~~~~~~~~tvi~~tH~~~ 193 (220)
T cd03265 167 RAHVWEYIEKLKEEFGMTILLTTHYME 193 (220)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 344556666665444678999999854
No 112
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=20.41 E-value=1.7e+02 Score=22.61 Aligned_cols=27 Identities=15% Similarity=0.147 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+.++..+.+..|+++||-.-
T Consensus 164 ~~~l~~~l~~~~~~~~~tii~~sH~~~ 190 (211)
T cd03298 164 RAEMLDLVLDLHAETKMTVLMVTHQPE 190 (211)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 344556666665444678999999764
No 113
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=20.41 E-value=1.6e+02 Score=23.70 Aligned_cols=28 Identities=11% Similarity=0.061 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...+.+++..+.++.+..|+++||-...
T Consensus 188 ~~~l~~~l~~~~~~~g~tvii~tH~~~~ 215 (262)
T PRK09984 188 ARIVMDTLRDINQNDGITVVVTLHQVDY 215 (262)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 4556677777655456799999999763
No 114
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=20.38 E-value=1.9e+02 Score=21.44 Aligned_cols=26 Identities=19% Similarity=0.271 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeCHHH
Q 027767 147 TARGMEFMKWLWTRQEKEIAVVSHGIF 173 (219)
Q Consensus 147 ~~R~~~~~~~l~~~~~~~ilivtH~~~ 173 (219)
...+.+.+.++.+ .+..|+++||-..
T Consensus 118 ~~~l~~~l~~~~~-~~~tiii~sh~~~ 143 (163)
T cd03216 118 VERLFKVIRRLRA-QGVAVIFISHRLD 143 (163)
T ss_pred HHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 4556666666643 3678999999965
No 115
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=20.31 E-value=1.9e+02 Score=22.37 Aligned_cols=33 Identities=27% Similarity=0.249 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHHHhhc-CCCeEEEEe--CHHHH
Q 027767 142 PFEEVTARGMEFMKWLWTR-QEKEIAVVS--HGIFL 174 (219)
Q Consensus 142 s~~~~~~R~~~~~~~l~~~-~~~~ilivt--H~~~i 174 (219)
|.+++.+|+.+.-++|.+. .+++.++|+ +|+++
T Consensus 13 see~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~ 48 (178)
T COG0634 13 SEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFP 48 (178)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchh
Confidence 6688999999999999876 445555444 55543
No 116
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=20.22 E-value=2e+02 Score=22.01 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
...++.+.+..+.+ .+..|+++||-.-.
T Consensus 124 ~~~~l~~~l~~~~~-~g~tvIivSH~~~~ 151 (176)
T cd03238 124 DINQLLEVIKGLID-LGNTVILIEHNLDV 151 (176)
T ss_pred HHHHHHHHHHHHHh-CCCEEEEEeCCHHH
Confidence 34555566666643 57799999999754
No 117
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=20.20 E-value=1.8e+02 Score=21.89 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
....+.+.+..+.++.+..|+++||-...
T Consensus 132 ~~~~~~~~l~~~~~~~~~tiii~sh~~~~ 160 (180)
T cd03214 132 HQIELLELLRRLARERGKTVVMVLHDLNL 160 (180)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 34566667776654336789999998553
No 118
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=20.12 E-value=1.7e+02 Score=23.44 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Q 027767 146 VTARGMEFMKWLWTRQEKEIAVVSHGIFL 174 (219)
Q Consensus 146 ~~~R~~~~~~~l~~~~~~~ilivtH~~~i 174 (219)
....+.+.+..+..+.+..|+++||-.-.
T Consensus 183 ~~~~l~~~l~~~~~~~~~tii~vsH~~~~ 211 (253)
T TIGR02323 183 VQARLLDLLRGLVRDLGLAVIIVTHDLGV 211 (253)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 34556677777655456799999998553
Done!