BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027772
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSIV 79
YDVFLSFRGEDTR FT +L+ L G F+DD+ L+ G I EL KAIEES +IV
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 80 ILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVRKQKGEDFERVFAKYEE 139
+ S+NYA+S WCL+EL KI+EC + K + V +FY VDP+ VR QK E F + F ++E
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFK-QTVIPIFYDVDPSHVRNQK-ESFAKAFEEHET 129
Query: 140 EFKENHEKVLKWRAALTTVASLAG 163
++K++ E + +WR AL A+L G
Sbjct: 130 KYKDDVEGIQRWRIALNEAANLKG 153
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 91/153 (59%), Gaps = 11/153 (7%)
Query: 19 KYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSI 78
+YDVF SFRGED RNNF +L G + F+DD + R + I EL AI ES +S+
Sbjct: 10 RYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDH-IKRSHTIGHELRAAIRESKISV 68
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVRKQKGE---DFERVFA 135
V+ S+NYASS WCLDEL +I++C + + KV VFY VDP+D+RKQ G+ F
Sbjct: 69 VLFSENYASSSWCLDELIEIMKC-KEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCC 127
Query: 136 KYEEEFKENHEKVLKWRAALTTVASLAGWHLQD 168
EE + N WR ALT A++ G H Q+
Sbjct: 128 GKTEERQHN------WRRALTDAANILGDHPQN 154
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 6/149 (4%)
Query: 19 KYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSI 78
+YDVF SFRGED R++F +L L R I F DDE ++R I EL AI+ES ++I
Sbjct: 11 RYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDE-IERSRSIGPELLSAIKESRIAI 68
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVRKQKGEDFERVFAKYE 138
VI SKNYASS WCL+EL +I +C ++ V +F+ VD ++V+KQ GE F +VF +
Sbjct: 69 VIFSKNYASSTWCLNELVEIHKCYTNL-NQMVIPIFFHVDASEVKKQTGE-FGKVFEETC 126
Query: 139 EEFKENHEKVLKWRAALTTVASLAGWHLQ 167
+ E+ ++ W+ AL VA +AG+ L+
Sbjct: 127 KAKSEDEKQ--SWKQALAAVAVMAGYDLR 153
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 13/169 (7%)
Query: 2 AASHTSSSSTHHQILQSKYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKD-DETLDRG 60
A+S + T Q VF++FRG+D RN F L A+ F D DE + G
Sbjct: 3 ASSSVRPTPTGPQ-------VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVV--G 53
Query: 61 NEISSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPA 120
++ + L I+ES V++VI SK+Y SS WCLDELA+I +C N+ +FY + P+
Sbjct: 54 TDLVN-LFVRIQESRVAVVIFSKDYTSSEWCLDELAEIKDCINQ-GGLNAIPIFYKLAPS 111
Query: 121 DVRKQKGEDFERVFAKYEEEFKENHEKVLKWRAALTTVASLAGWHLQDR 169
V + KG F F +E++K + E+ KW+ AL ++ L G L ++
Sbjct: 112 SVLELKG-GFGDTFRVLKEKYKNDPERTQKWQEALESIPKLKGLRLAEK 159
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 4 SHTSSSSTHHQILQSKYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEI 63
S+ +SS+ H I +Y VF++FRG++ RN+F L A+ F D+ L RG +
Sbjct: 342 SNAASSTDDHGITLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVEL-RGTNL 400
Query: 64 SSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVR 123
+ L + IEES V++ I S+ Y S WCLDEL K+ E + K V VFY ++ +
Sbjct: 401 NY-LFRRIEESRVAVAIFSERYTESCWCLDELVKMKEQMEQGK-LVVVPVFYRLNATACK 458
Query: 124 KQKGEDFERVFAKYEEEFKENHEKVLKWRAALTTVASLAGWHLQDRFFPLI 174
+ G F E E++ E++ KW+ AL++V S G R + LI
Sbjct: 459 RFMGA-FGDNLRNLEWEYRSEPERIQKWKEALSSVFSNIGLTSDIRRYNLI 508
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 15 ILQSKYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEES 74
++ + VF++FRG+D R F L AL + F D++ +RG + S L I ES
Sbjct: 17 LIPTGPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQE-ERGKYLIS-LFDTIGES 74
Query: 75 NVSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVD---PADVRKQKGEDFE 131
+++VI S+ Y S WC+DEL KI E ++ + + +FY +D D+ + G++F
Sbjct: 75 KIALVIFSEGYCESHWCMDELVKIKEYMDQNR-LIIIPIFYRLDLDVVKDLTGKFGDNFW 133
Query: 132 RVFAKYEEEFKENHEKVLKWRAALTTVASL 161
+ KY+ E K+ H KW AL +V L
Sbjct: 134 DLVDKYQPEPKKLH----KWTEALFSVCEL 159
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 7 SSSSTHHQILQSKYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSE 66
+SSS+ + + VF+ FRG D R +F L AL R I DE G+E+++
Sbjct: 2 ASSSSVVKPTPTGPQVFICFRGADVRKHFISFLVPAL-REANINVFIDENEFLGSEMANL 60
Query: 67 LSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKDRK---VFAVFYGVDPADVR 123
L++ IEES +++VI S ++ S CL+ELAKI E RKD+ V +FY V P+ V+
Sbjct: 61 LTR-IEESELALVIFSVDFTRSHRCLNELAKIKE----RKDQGRLIVIPIFYKVKPSAVK 115
Query: 124 KQKGEDFERVFAKYEEEFKENHEKVLKWRAALTTVASLAGWHLQDR 169
+G+ F F E + KW+ AL ++ G L ++
Sbjct: 116 FLEGK-FGDNFRALERNNRHMLPITQKWKEALESIPGSIGMPLAEQ 160
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 28/151 (18%)
Query: 20 YDVFLSFRGEDTRN-NFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSI 78
YDV + + D N +F +L +L R G + ++ NE+ A+ + V I
Sbjct: 668 YDVVIRYGRADISNEDFISHLRASLCRRGISVY------EKFNEVD-----ALPKCRVLI 716
Query: 79 VILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVRKQKGEDFERVFAKYE 138
++L+ Y S L I+E +DR V+ +FY + P D +++ER + + E
Sbjct: 717 IVLTSTYVPS-----NLLNILE-HQHTEDRVVYPIFYRLSPYDFVCNS-KNYERFYLQDE 769
Query: 139 EEFKENHEKVLKWRAALTTVASLAGWHLQDR 169
+ KW+AAL + + G+ L D+
Sbjct: 770 PK---------KWQAALKEITQMPGYTLTDK 791
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 29 EDTRNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNYASS 88
E+ R +F +L AL R G D +D + + E IE++ VS+++L N S
Sbjct: 17 EEVRYSFVSHLSEALRRKGINNVVVDVDID--DLLFKESQAKIEKAGVSVMVLPGNCDPS 74
Query: 89 PWCLDELAKIVECGNKRKDRKVFAVFYG 116
LD+ AK++EC KD+ V +V YG
Sbjct: 75 EVWLDKFAKVLECQRNNKDQAVVSVLYG 102
>sp|A4FK76|IDI_SACEN Isopentenyl-diphosphate Delta-isomerase OS=Saccharopolyspora
erythraea (strain NRRL 23338) GN=idi PE=3 SV=1
Length = 194
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 48 FIAFKDDETLDRGNEISSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKD 107
F AF DDE E++ + + S S +L+ SPWC ++A++VE G +
Sbjct: 119 FAAFTDDEPAPNREEVAG--TAWADWSGFSAEVLAGTTDISPWCRQQVAELVELGANPAE 176
Query: 108 RKVFAVFYGVDPADV 122
+ DPAD+
Sbjct: 177 ------WPAADPADL 185
>sp|Q9QUN7|TLR2_MOUSE Toll-like receptor 2 OS=Mus musculus GN=Tlr2 PE=1 SV=1
Length = 784
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ ++ +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDS--HWVENLMVQQLENSDPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVRSEWCKYEL 717
>sp|Q15399|TLR1_HUMAN Toll-like receptor 1 OS=Homo sapiens GN=TLR1 PE=1 SV=3
Length = 786
Score = 34.7 bits (78), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 19 KYDVFLSFRGEDT---RNNFTDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESN 75
++ F+S+ G D+ +N NL + G + G I + IE+S
Sbjct: 636 QFHAFISYSGHDSFWVKNELLPNLE----KEGMQICLHERNFVPGKSIVENIITCIEKSY 691
Query: 76 VSIVILSKNYASSPWCLDEL 95
SI +LS N+ S WC EL
Sbjct: 692 KSIFVLSPNFVQSEWCHYEL 711
>sp|Q9R1F8|TLR2_CRIGR Toll-like receptor 2 OS=Cricetulus griseus GN=TLR2 PE=2 SV=2
Length = 784
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQQLENSEPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TLFVLSENFVRSEWCKYEL 717
>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=TLR10 PE=1 SV=2
Length = 811
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 5 HTSSSSTHHQILQS-KYDVFLSFRGEDT---RNNFTDNLHTALIRNGFIAFKDDET-LDR 59
H +T Q+ ++ ++ F+S+ D+ +N NL +G I E+ D
Sbjct: 618 HRVRKTTQEQLKRNVRFHAFISYSEHDSLWVKNELIPNLEK---EDGSILICLYESYFDP 674
Query: 60 GNEISSELSKAIEESNVSIVILSKNYASSPWC 91
G IS + IE+S SI +LS N+ + WC
Sbjct: 675 GKSISENIVSFIEKSYKSIFVLSPNFVQNEWC 706
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 70 AIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFA-VFYGVDPADVR 123
A+ +S V L +N+ ++ +DE K VE +KR+D VF+ +F G P ++R
Sbjct: 104 AVNDSRWHAVTLRRNFKNTTLVVDEEIKWVEVKSKRRDMTVFSHLFLGGIPPELR 158
>sp|Q9JLZ8|SIGIR_MOUSE Single Ig IL-1-related receptor OS=Mus musculus GN=Sigirr PE=1 SV=2
Length = 409
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALI--RNGFIAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F +D L E S++L +
Sbjct: 164 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRKDRKVFAVFYG 116
IV+LS + S PWC + L +++E R +F F G
Sbjct: 224 IVVLSDAFLSRPWCSQSFREGLCRLLELTR----RPIFITFEG 262
>sp|P22354|RM20_YEAST 54S ribosomal protein L20, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MRPL20 PE=1
SV=2
Length = 195
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 36 TDNLHTALIRNGFIAFKDDETLDRGNEISSELSKAIEESNVSI---VILSKNYASSPWCL 92
T ++++ I F+A D RG ++ + +KA + NV + + K Y P +
Sbjct: 63 TGSVNSETIPRSFMAASDPR---RGLDMPVQSTKAKQCPNVLVGKSTVNGKTYHLGPQEI 119
Query: 93 DELAKIVECGNKRKDRKVFAVFYGVDP 119
DE+ K+ ++ RK A YG+ P
Sbjct: 120 DEIRKLRLDNPQKYTRKFLAAKYGISP 146
>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1
Length = 505
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 161 LAGWHLQDRFFPLIYLLLFNYLFTLIIFCLFSGDVSPLAFYKH 203
+ GW +F P I+L Y FT IF L G S +A Y H
Sbjct: 157 ILGWEALTKFVPTIFLDSMGYAFTFPIFSLIGG--STVACYVH 197
>sp|Q8TWY1|SYA_METKA Alanine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=alaS PE=3 SV=2
Length = 915
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 114 FYGVDPADVRK---QKGEDFERVFAKYEEEFKENHEKVLKWRAAL-TTVASLA 162
F G PA V+ + GE+F R F +++ E + + V +WR + T+AS+A
Sbjct: 49 FIGDPPASVKLDVWEAGEEFFRFFERHDHEVLDRYPVVARWRDDIHLTIASIA 101
>sp|Q4V892|SIGIR_RAT Single Ig IL-1-related receptor OS=Rattus norvegicus GN=Sigirr PE=2
SV=1
Length = 409
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALI--RNGFIAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F +D L E S++L +
Sbjct: 164 YDAYVSYSDRPEDRKFVNFILKPQLERRRGYKLFLEDRDLLPRAEPSADLLVNLSRCRRL 223
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRKDRKVFAVFYG 116
IV+LS + PWC + L +++E R +F F G
Sbjct: 224 IVVLSDAFLRRPWCSQSFREGLCRLLELTR----RPIFITFEG 262
>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
Length = 1097
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 19 KYDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESN 75
K+D F+S+ +D +F ++ + +G F+ + G I + +++ +S
Sbjct: 858 KFDAFISYSHKD--QSFIEDYLVPQLEHGPQKFQLCVHERDWLVGGHIPENIMRSVADSR 915
Query: 76 VSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVRK 124
+I++LS+N+ S W E ++ + Y D DV K
Sbjct: 916 RTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYS-DIGDVEK 963
>sp|Q2PZH4|TLR2_BUBBU Toll-like receptor 2 OS=Bubalus bubalis GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + +NL + + FK G I + +IE+S+
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVKSEWCKYEL 717
>sp|P97357|TAF1A_MOUSE TATA box-binding protein-associated factor RNA polymerase I subunit
A OS=Mus musculus GN=Taf1a PE=1 SV=1
Length = 453
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 61 NEISSELSK-AIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKD 107
++ EL+K A+ E N +LSK PW + +V G KRKD
Sbjct: 3 SDFGEELTKLAVAEDNPETSVLSKTGMHFPWLHKHVEAVVTGGKKRKD 50
>sp|Q704V6|TLR6_BOVIN Toll-like receptor 6 OS=Bos taurus GN=TLR6 PE=2 SV=1
Length = 793
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 19 KYDVFLSFRGEDT---RNNFTDNLHTALIR-----NGFIAFKDDETLDRGNEISSELSKA 70
++ F+S+ D+ +N NL IR F+A G I +
Sbjct: 641 QFHAFISYSEHDSAWVKNELIPNLEKEDIRICLHERNFVA---------GKSIVENIINC 691
Query: 71 IEESNVSIVILSKNYASSPWCLDEL 95
IE+S SI +LS N+ S WC EL
Sbjct: 692 IEKSYKSIFVLSPNFVQSEWCHYEL 716
>sp|Q9DGB6|TLR22_CHICK Toll-like receptor 2 type-2 OS=Gallus gallus GN=TLR2-2 PE=2 SV=1
Length = 781
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ N+ +N+ + F+ G I + +IE+S+
Sbjct: 638 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 695
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+++ S WC EL
Sbjct: 696 TLFVLSEHFVQSEWCKYEL 714
>sp|B3Y618|TLR2_MACMU Toll-like receptor 2 OS=Macaca mulatta GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|Q95M53|TLR2_MACFA Toll-like receptor 2 OS=Macaca fascicularis GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|Q6IA17|SIGIR_HUMAN Single Ig IL-1-related receptor OS=Homo sapiens GN=SIGIRR PE=1 SV=3
Length = 410
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALI--RNGFIAFKDDETLDRGNEISSELSKAIEESNVS 77
YD ++S+ F + + + R G+ F DD L E S++L +
Sbjct: 165 YDAYVSYSDCPEDRKFVNFILKPQLERRRGYKLFLDDRDLLPRAEPSADLLVNLSRCRRL 224
Query: 78 IVILSKNYASSPWC----LDELAKIVECGNKRKDRKVFAVFYGV--DPA 120
IV+LS + S WC + L +++E R +F F G DPA
Sbjct: 225 IVVLSDAFLSRAWCSHSFREGLCRLLELTR----RPIFITFEGQRRDPA 269
>sp|Q9DD78|TLR21_CHICK Toll-like receptor 2 type-1 OS=Gallus gallus GN=TLR2-1 PE=2 SV=1
Length = 793
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D+ N+ +N+ + F+ G I + +IE+S+
Sbjct: 650 YDAFVSYSENDS--NWVENIMVQQLEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHK 707
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+++ S WC EL
Sbjct: 708 TLFVLSEHFVQSEWCKYEL 726
>sp|O60603|TLR2_HUMAN Toll-like receptor 2 OS=Homo sapiens GN=TLR2 PE=1 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B3Y615|TLR2_GORGO Toll-like receptor 2 OS=Gorilla gorilla gorilla GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B3Y613|TLR2_PANTR Toll-like receptor 2 OS=Pan troglodytes GN=TLR2 PE=2 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B3Y614|TLR2_PANPA Toll-like receptor 2 OS=Pan paniscus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ D + +NL + N FK G I + +IE+S+
Sbjct: 641 YDAFVSYSERDAY--WVENLMVQELENFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
++ +LS+N+ S WC EL
Sbjct: 699 TVFVLSENFVKSEWCKYEL 717
>sp|B2LT62|TLR2_CAPIB Toll-like receptor 2 OS=Capra ibex GN=TLR2 PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + +NL + + FK G I + +IE+S
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVRSEWCKYEL 717
>sp|Q9UKX3|MYH13_HUMAN Myosin-13 OS=Homo sapiens GN=MYH13 PE=1 SV=2
Length = 1938
Score = 30.8 bits (68), Expect = 7.5, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 64 SSELSKAIEESNVSIVILSKNYASSPWCLDELAKIVECGNKRKDRKVFAVFYGVDPADVR 123
+ ELS +EE I L+K+ + L+EL + +E K K+ A+ D+
Sbjct: 1288 NGELSHRVEEKESLISQLTKSKQALTQQLEELKRQMEEETKAKNAMAHALQSSRHDCDLL 1347
Query: 124 KQKGEDFERVFAKYEEEFKENHEKVLKWRAALTTVA 159
+++ E+ + A+ + + + +V +WR T A
Sbjct: 1348 REQYEEEQEAKAELQRALSKANSEVAQWRTKYETDA 1383
>sp|Q0GC71|TLR2_CAPHI Toll-like receptor 2 OS=Capra hircus GN=TLR2 PE=2 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 YDVFLSFRGEDTRNNFTDNLHTALIRNGFIAFK---DDETLDRGNEISSELSKAIEESNV 76
YD F+S+ +D+ + +NL + + FK G I + +IE+S
Sbjct: 641 YDAFVSYSEQDSY--WVENLMVQELEHFNPPFKLCLHKRDFVPGKWIIDNIIDSIEKSRK 698
Query: 77 SIVILSKNYASSPWCLDEL 95
+I +LS+N+ S WC EL
Sbjct: 699 TIFVLSENFVRSEWCKYEL 717
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,210,677
Number of Sequences: 539616
Number of extensions: 3073496
Number of successful extensions: 9408
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 9346
Number of HSP's gapped (non-prelim): 77
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)