BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027774
(219 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BRX|A Chain A, Crystal Structure Of Calcium-Bound Cotton Annexin Gh1
Length = 317
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 14/212 (6%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L KAFSG G +E +I ILG+ E R RK E + + +K L
Sbjct: 17 DCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYA---------ETYGEDLLKALD 67
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V+LWA+ P ERDA L EA K+ +SN V++EIA TRS+++LL AR+AYH
Sbjct: 68 KELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYH 127
Query: 122 SLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQN 181
+ ++ S+EEDVA H G KLL+ LVS+YRYEG +V +AK+EAK L + N
Sbjct: 128 ARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLLHEKISN----K 183
Query: 182 PIENDEVVRILSTRSKPHLKSVFKHYKEIAGQ 213
+D+V+R+L+TRSK + + HYK G
Sbjct: 184 AYSDDDVIRVLATRSKAQINATLNHYKNEYGN 215
>pdb|1N00|A Chain A, Annexin Gh1 From Cotton
Length = 321
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 125/212 (58%), Gaps = 14/212 (6%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L KAFSG G +E +I ILG+ E R RK E + + +K L
Sbjct: 21 DCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYA---------ETYGEDLLKALD 71
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V+LWA+ P ERDA L EA K+ +SN V++EIA TRS+++LL AR+AYH
Sbjct: 72 KELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYH 131
Query: 122 SLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQN 181
+ ++ S+EEDVA H G KLL+ LVS+YRYEG +V +AK+EAK L + N
Sbjct: 132 ARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLLHEKISN----K 187
Query: 182 PIENDEVVRILSTRSKPHLKSVFKHYKEIAGQ 213
+D+V+R+L+TRSK + + HYK G
Sbjct: 188 AYSDDDVIRVLATRSKAQINATLNHYKNEYGN 219
>pdb|1YCN|A Chain A, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|1YCN|B Chain B, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|2Q4C|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
pdb|2Q4C|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
Length = 317
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 16/213 (7%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
E L AF G G +E +ISIL + E R+ R+ E + + +K L E
Sbjct: 18 EQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQA---------YHETYGEDLLKTLDKE 68
Query: 65 FMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
F+ A++LW + P ERDA L EA K+ +SN V++E+A TR+S +LL AR+AYH+
Sbjct: 69 LSNDFERAILLWTLEPGERDALLANEATKRWTSSNQVLMEVACTRTSTQLLHARQAYHAR 128
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
++ S+EEDVA H G +KLLV+LV++YRYEG +V +AK EAK + +K+
Sbjct: 129 YKKSLEEDVAHHTTGDFRKLLVSLVTSYRYEGDEVNMTLAKQEAKLVHEKIKDKHY---- 184
Query: 184 ENDE-VVRILSTRSKPHLKSVFKHYKEIAGQHF 215
NDE V+RILSTRSK + + F Y++ G+
Sbjct: 185 -NDEDVIRILSTRSKAQINATFNRYQDDHGEEI 216
>pdb|1DK5|A Chain A, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
pdb|1DK5|B Chain B, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
Length = 322
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 126/217 (58%), Gaps = 17/217 (7%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L AF G G +EK +ISIL + R+ R+ E + + +K L
Sbjct: 24 DCEQLRSAFKGWGTNEKLIISILAHRTAAQRKLIRQTYA---------ETFGEDLLKELD 74
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V++W + P ERDA L KEA K+ SN V+VE+A TRS EL+ AR+AYH
Sbjct: 75 RELTHDFEKLVLVWTLDPSERDAHLAKEATKRWTKSNFVLVELACTRSPKELVLAREAYH 134
Query: 122 SLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQN 181
+ ++ S+EEDVA H G +KLLV LVS+YRY G +V +AK+E+K L + +
Sbjct: 135 ARYKKSLEEDVAYHTTGDHRKLLVPLVSSYRYGGEEVDLRLAKAESKILHEKISD----K 190
Query: 182 PIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDV 218
+DEV+RIL+TRSK L + HYK+ +H ED+
Sbjct: 191 AYSDDEVIRILATRSKAQLNATLNHYKD---EHGEDI 224
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
EA+ KA G G DEK +ISIL RQ KE + A + + +D L H
Sbjct: 25 EAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKE--YQAAYGKELK--DDLKGDLSGH- 79
Query: 65 FMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLF 124
F++ +V P DA+ +K+++K + ++EI +TR+S ++ +AY++++
Sbjct: 80 ---FEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVY 136
Query: 125 EHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIE 184
+ S+ +D++S G +K L+ L R E KV E +AK +A+ L A E + +
Sbjct: 137 KKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKA---GENRWGTD 193
Query: 185 NDEVVRILSTRSKPHLKSVFKHYKEIAGQ------------HFEDV 218
D+ IL RS P LK F Y+ I+ + HFED+
Sbjct: 194 EDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDL 239
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 23/228 (10%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ EA+ KA G G DEK +ISIL RQ KE + A + + +D L
Sbjct: 23 DAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKE--YQAAYGKELK--DDLKGDLSG 78
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
H F++ +V P DA+ +K+++K + ++EI +TR+S ++ +AY++
Sbjct: 79 H----FEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYT 134
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNP 182
+++ S+ +D++S G +K L+ L R E KV E +AK +A+ L A E +
Sbjct: 135 VYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKA---GENRWG 191
Query: 183 IENDEVVRILSTRSKPHLKSVFKHYKEIAGQ------------HFEDV 218
+ D+ IL RS P LK F Y+ I+ + HFED+
Sbjct: 192 TDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDL 239
>pdb|1SAV|A Chain A, Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +F+ +V DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALMKXSRLYDAYELKHALKGAGTNEKVLTEIIASRTXEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDXDAGIDEAQVEQDAQALFQA--- 182
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 225
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + E +Q + +E G ED+ + + V LL+
Sbjct: 99 ALKGAGTNEKVLTEIIASRTXEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 158
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 159 AN--RDXDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 213
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 214 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIXAYLAETLYYAMKGA--- 262
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 289
>pdb|1ALA|A Chain A, Structure Of Chicken Annexin V At 2.25-Angstroms
Resolution
Length = 321
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ EAL KA G G DE+T++ IL + RQ AF+ F D
Sbjct: 19 ADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKT---LFGRD----------L 65
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
V LK E +++ M P DA +K A+K + V+ EI ++R+ E+
Sbjct: 66 VDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y +E ++E+ + G ++LLV L+ A R +V+E + + +A+ L A
Sbjct: 126 KQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVEEALVEKDAQVLFRA--- 182
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDV 218
E + + + + IL TRS HL+ VF Y I+G E+
Sbjct: 183 GELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEET 224
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 32/210 (15%)
Query: 6 ALIKAFSGHGVDEKTVISILGNSQPEHRQAFRK----------EGGFFAEDERRFERWND 55
AL A G G +EK + IL + P Q ++ E E F+R
Sbjct: 95 ALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLV 154
Query: 56 HHVKLLKHEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDEL 113
++ + R + A+V E+DA+++ A LK G + + I I TRS L
Sbjct: 155 VLLQANRDPDGRVEEALV-------EKDAQVLFRAGELKWGTDEETFIT-ILGTRSVSHL 206
Query: 114 LGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISA 173
Y ++ IEE + G +KLL+A+V R V A+ L +
Sbjct: 207 RRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIR--------SVPAYFAETLYYS 258
Query: 174 VKNAEKQNPIENDEVVRILSTRSKPHLKSV 203
+K A ++D ++R++ +RS+ L +
Sbjct: 259 MKGA----GTDDDTLIRVMVSRSEIDLLDI 284
>pdb|2H0K|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
pdb|2H0K|B Chain B, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ E L KA G G DE +++++L RQ +E E F R V +
Sbjct: 16 ADAEVLEKAMEGLGTDEDSILNLLTARSNAQRQQIAEEF------ETLFGR---DLVNDM 66
Query: 62 KHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K E +++ M P DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 67 KSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 126
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 127 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 183
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ +E + IL TRS HL+ VF Y I+G E+
Sbjct: 184 WGTDEEEFITILGTRSVSHLRRVFDKYMTISGFQIEETI 222
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 68 FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHS 127
+ V ++ E DA ++++A++ I+ + + RS+ + + + +LF
Sbjct: 2 LRGTVTDFSGFDGEADAEVLEKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFETLFGRD 61
Query: 128 IEEDVASHIHGKEKKLLVALVSAYR-YEGPKVKEDVAKSEAKALISAVKNAEKQNPIEND 186
+ D+ S + GK +KL+VAL+ R Y+ ++K A+K A +
Sbjct: 62 LVNDMKSELTGKFEKLIVALMKPSRLYDAYELKH------------ALKGAGTDEKV--- 106
Query: 187 EVVRILSTRSKPHLKSVFKHYKEIAGQHFED 217
+ I+++R+ L+++ + Y+E G + ED
Sbjct: 107 -LTEIIASRTPEELRAIKQAYEEEYGSNLED 136
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 96 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGDT-SGYYQRMLVVLL 154
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 155 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEEFIT-ILGTRSVSHLRRVFDKYMTI 213
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 214 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 261
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 DDHTLIRVIVSRSEIDLFNIRKEFR 286
>pdb|1YII|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Ca2+
pdb|1YJ0|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Zn2+
Length = 320
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ EAL KA G G DE+T++ IL + RQ AF+ F D
Sbjct: 18 ADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKT---LFGRD----------L 64
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
V LK E +++ M P DA +K A+K + V+ EI ++R+ E+
Sbjct: 65 VDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y +E ++E+ + G ++LLV L+ A R +V E + + +A+ L A
Sbjct: 125 KQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRA--- 181
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDV 218
E + + + + IL TRS HL+ VF Y I+G E+
Sbjct: 182 GELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEET 223
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 32/210 (15%)
Query: 6 ALIKAFSGHGVDEKTVISILGNSQPEHRQAFRK----------EGGFFAEDERRFERWND 55
AL A G G +EK + IL + P Q ++ E E F+R
Sbjct: 94 ALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLV 153
Query: 56 HHVKLLKHEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDEL 113
++ + R A+V E+DA+++ A LK G + + I I TRS L
Sbjct: 154 VLLQANRDPDGRVDEALV-------EKDAQVLFRAGELKWGTDEETFIT-ILGTRSVSHL 205
Query: 114 LGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISA 173
Y ++ IEE + G +KLL+A+V R V A+ L +
Sbjct: 206 RRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIR--------SVPAYFAETLYYS 257
Query: 174 VKNAEKQNPIENDEVVRILSTRSKPHLKSV 203
+K A ++D ++R++ +RS+ L +
Sbjct: 258 MKGA----GTDDDTLIRVMVSRSEIDLLDI 283
>pdb|2H0L|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ E L KA G G DE +++++L RQ +E E F R V +
Sbjct: 16 ADAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEF------ETLFGR---DLVNDM 66
Query: 62 KHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K E +++ M P DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 67 KSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 126
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 127 EEEYGSNLEDDVVGDTSGYYQEMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 183
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ +E + IL TRS HL+ VF Y I+G E+
Sbjct: 184 WGTDEEEFITILGTRSVSHLRRVFDKYMTISGFQIEETI 222
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 68 FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHS 127
+ V ++ E DA ++++A++ I+ + + RS+ + + + +LF
Sbjct: 2 LRGTVTDFSGFDGEADAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFETLFGRD 61
Query: 128 IEEDVASHIHGKEKKLLVALVSAYR-YEGPKVKEDVAKSEAKALISAVKNAEKQNPIEND 186
+ D+ S + GK +KL+VAL+ R Y+ ++K A+K A +
Sbjct: 62 LVNDMKSELTGKFEKLIVALMKPSRLYDAYELKH------------ALKGAGTDEKV--- 106
Query: 187 EVVRILSTRSKPHLKSVFKHYKEIAGQHFED 217
+ I+++R+ L+++ + Y+E G + ED
Sbjct: 107 -LTEIIASRTPEELRAIKQAYEEEYGSNLED 136
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G DEK + I+ + PE +QA+ +E G ED+ + + + V LL+
Sbjct: 96 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLLQ 155
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
R + + A + A LK G + I I TRS L Y +
Sbjct: 156 AN--RDPDTAIDDAQVELDAQALFQAGELKWGTDEEEFIT-ILGTRSVSHLRRVFDKYMT 212
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNP 182
+ IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 213 ISGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----G 260
Query: 183 IENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 261 TDDHTLIRVIVSRSEIDLFNIRKEFR 286
>pdb|1HVF|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 181
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 224
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 98 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 157
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 158 AN--RDPDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 212
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 213 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAMKGA--- 261
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 288
>pdb|1HVE|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
pdb|1HVG|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +F+ +V DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 181
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 224
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 98 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 157
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 158 AN--RDPDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 212
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 213 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAMKGA--- 261
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 288
>pdb|1BC0|A Chain A, Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 AGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKAGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1ANW|A Chain A, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANW|B Chain B, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANX|A Chain A, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|B Chain B, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|C Chain C, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
Length = 319
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 181
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 224
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 98 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 157
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 158 AN--RDPDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 212
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 213 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAMKGA--- 261
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 288
>pdb|1W45|A Chain A, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus.
pdb|1W45|B Chain B, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
E L KA G G +E+ +I +L RQ K F A+ + + LK E
Sbjct: 28 ETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAK--SFKAQ-------FGKDLTETLKSE 78
Query: 65 FM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
+F+ +V P+ +A+ + +A+K VI+EI ++R+ ++L KAY
Sbjct: 79 LSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEED 138
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPK-VKEDVAKSEAKALISAVKNAEKQNP 182
+ S+EED+ + G +++LV L+ R + V +A +A+ L +A EK
Sbjct: 139 YGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAA---GEKIRG 195
Query: 183 IENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFED 217
+ + + IL TRS HL VF+ Y++IA + ED
Sbjct: 196 TDEMKFITILCTRSATHLLRVFEEYEKIANKSIED 230
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 102 VEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKED 161
+ I TRS+ LL + Y + SIE+ + S HG ++ ++ +V K ++
Sbjct: 202 ITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVV--------KCTQN 253
Query: 162 VAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHF 215
+ A+ L A+K A ++ ++R + +RS+ L + H+K++ G+
Sbjct: 254 LHSYFAERLYYAMKGAGTRDGT----LIRNIVSRSEIDLNLIKCHFKKMYGKTL 303
>pdb|1HVD|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 181
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 182 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 224
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 98 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 157
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 158 AN--RDPDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 212
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 213 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAMKGA--- 261
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 288
>pdb|1W3W|A Chain A, The 2.1 Angstroem Resolution Structure Of Annexin A8
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
E L KA G G +E+ +I +L RQ K F A+ + + LK E
Sbjct: 28 ETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAK--SFKAQ-------FGKDLTETLKSE 78
Query: 65 FM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
+F+ +V P+ +A+ + +A+K VI+EI ++R+ ++L KAY
Sbjct: 79 LSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEED 138
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPK-VKEDVAKSEAKALISAVKNAEKQNP 182
+ S+EED+ + G +++LV L+ R + V +A +A+ L +A EK
Sbjct: 139 YGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAA---GEKIRG 195
Query: 183 IENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFED 217
+ + + IL TRS HL VF+ Y++IA + ED
Sbjct: 196 TDEMKFITILCTRSATHLLRVFEEYEKIANKSIED 230
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 102 VEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKED 161
+ I TRS+ LL + Y + SIE+ + S HG ++ ++ +V K ++
Sbjct: 202 ITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVV--------KCTQN 253
Query: 162 VAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHF 215
+ A+ L A+K A ++ ++R + +RS+ L + H+K++ G+
Sbjct: 254 LHSYFAERLYYAMKGAGTRDGT----LIRNIVSRSEIDLNLIKCHFKKMYGKTL 303
>pdb|1AVH|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1AVH|B Chain B, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
Length = 320
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G +++LV L+ A R + E + +A+AL A
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 182
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETI 225
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 99 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQ 158
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 159 AN--RDPDAGIDEA--QVEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 213
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A+K A
Sbjct: 214 MTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAMKGA--- 262
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 -GTDDHTLIRVMVSRSEIDLFNIRKEFR 289
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|2IE6|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Xenon
pdb|2IE7|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Nitrous Oxide
Length = 318
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 16 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 65
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 66 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 125
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 126 YEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 182
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 183 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 222
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 96 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 154
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 155 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 213
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 214 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 261
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 DDHTLIRVIVSRSEIDLFNIRKEFR 286
>pdb|1A8A|A Chain A, Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B|A Chain A, Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 319
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 127 YEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 183
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|2RAN|A Chain A, Rat Annexin V Crystal Structure: Ca2+-Induced
Conformational Changes
Length = 316
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 16 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 70
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 71 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 126
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 127 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 183
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 222
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 96 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 154
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 155 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 213
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 214 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 261
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 DDHTLIRVIVSRSEIDLFNIRKEFR 286
>pdb|1BCY|A Chain A, Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 127 YEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 183
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1BC3|A Chain A, Recombinant Rat Annexin V, Triple Mutant (T72k, S144k,
S228k)
Length = 319
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 127 YEEEYGSNLEDDVVGDTKGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 183
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 10 AFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFK 69
A G G DEK + I+ + PE +A ++ A +E D V K + R
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQ-----AYEEEYGSNLEDDVVGDTKGYYQRML 151
Query: 70 NAVVLWAMHP--------WERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKA 119
++ P E DA+ + +A LK G + I I TRS L
Sbjct: 152 VVLLQANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDK 210
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y ++ IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 211 YMTISGFQIEETIDRETKGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA-- 260
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 261 --GTDDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1BC1|A Chain A, Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k,
S228k, S303k)
Length = 319
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 127 YEEEYGSNLEDDVVGDTKGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 183
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 28/209 (13%)
Query: 10 AFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFK 69
A G G DEK + I+ + PE +A ++ A +E D V K + R
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQ-----AYEEEYGSNLEDDVVGDTKGYYQRML 151
Query: 70 NAVVLWAMHP--------WERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKA 119
++ P E DA+ + +A LK G + I I TRS L
Sbjct: 152 VVLLQANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDK 210
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y ++ IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 211 YMTISGFQIEETIDRETKGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA-- 260
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 261 --GTDDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1N41|A Chain A, Crystal Structure Of Annexin V K27e Mutant
Length = 319
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1N44|A Chain A, Crystal Structure Of Annexin V R23e Mutant
Length = 319
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLEKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1BCW|A Chain A, Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 AG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|2H0M|A Chain A, Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDCAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDCAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1BCZ|A Chain A, Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELSGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + ++E+DV G +++LV L+ A R + + + +A+AL A E
Sbjct: 127 YEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GEL 183
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ + ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 184 KWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFERWNDHHVKLLKHEF 65
A G G DEK + I+ + PE +QA+ +E G ED+ + + ++ ++L
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGD-TSGYYQRMLVVLL 155
Query: 66 MRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
++ E DA+ + +A LK G + I I TRS L Y ++
Sbjct: 156 QANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMTI 214
Query: 124 FEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPI 183
IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 215 SGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----GT 262
Query: 184 ENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 263 DDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|1N42|A Chain A, Crystal Structure Of Annexin V R149e Mutant
Length = 319
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 72 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 127
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ ++E+DV G +++LV L+ A R + + + +A+AL A E +
Sbjct: 128 EEEYGSNLEDDVVGDTSGYYQEMLVVLLQANRDPDTAIDDAQVELDAQALFQA---GELK 184
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
+ ++ + IL TRS HL+ VF Y I+G E+
Sbjct: 185 WGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETI 223
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G DEK + I+ + PE +QA+ +E G ED+ + + + V LL+
Sbjct: 97 ALKGAGTDEKVLTEIIASRTPEELRAIKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLLQ 156
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
R + + A + A LK G + I I TRS L Y +
Sbjct: 157 AN--RDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFIT-ILGTRSVSHLRRVFDKYMT 213
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNP 182
+ IEE + G + LL+A+V + R + A+ L A+K A
Sbjct: 214 ISGFQIEETIDRETSGNLENLLLAVVKSIR--------SIPAYLAETLYYAMKGA----G 261
Query: 183 IENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R++ +RS+ L ++ K ++
Sbjct: 262 TDDHTLIRVIVSRSEIDLFNIRKEFR 287
>pdb|2XO2|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Azidohomoalanine
pdb|2XO3|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Homopropargylglycine
Length = 320
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAXKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +F+ +V DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALXKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
++ Y + S+E+DV G ++ LV L+ A R + E + +A+AL A
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSGYYQRXLVVLLQANRDPDAGIDEAQVEQDAQALFQA--- 182
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFEDVC 219
E + + ++ + I TRS HL+ VF Y I+G E+
Sbjct: 183 GELKWGTDEEKFITIFGTRSVSHLRKVFDKYXTISGFQIEETI 225
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 10 AFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERRFER---WNDHHVKLLK 62
A G G +EK + I+ + PE +Q + +E G ED+ + + V LL+
Sbjct: 99 ALKGAGTNEKVLTEIIASRTPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRXLVVLLQ 158
Query: 63 HEFMRFKNAVVLWAMHPWERDARLIKEA--LKKGPNSNSVIVEIASTRSSDELLGARKAY 120
R +A + A E+DA+ + +A LK G + I I TRS L Y
Sbjct: 159 AN--RDPDAGIDEAQ--VEQDAQALFQAGELKWGTDEEKFIT-IFGTRSVSHLRKVFDKY 213
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
++ IEE + G ++LL+A+V + R + A+ L A K A
Sbjct: 214 XTISGFQIEETIDRETSGNLEQLLLAVVKSIR--------SIPAYLAETLYYAXKGA--- 262
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
++ ++R+ +RS+ L ++ K ++
Sbjct: 263 -GTDDHTLIRVXVSRSEIDLFNIRKEFR 289
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
+++EAL KA + GVDE T+I IL RQ + + E + + + L
Sbjct: 46 SDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIK--AAYLQEKGKPLD-------EAL 96
Query: 62 KHEFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K V L + P + DA ++ A+K + EI ++R++ E+ + Y
Sbjct: 97 KKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVY 156
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ + +D+ S G +K L++L R E + +D+A ++A+AL A E++
Sbjct: 157 KEELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEA---GERR 213
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHY 207
+ + + IL+TRS PHL+ VF+ Y
Sbjct: 214 KGTDLNVFITILTTRSYPHLRRVFQKY 240
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 7/137 (5%)
Query: 15 GVDEKTVISILGN-SQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKNAVV 73
G D I+IL S P R+ F+K + D + LK + VV
Sbjct: 215 GTDLNVFITILTTRSYPHLRRVFQKYSKYSKHDMNKVLDLE------LKGDIENCLTVVV 268
Query: 74 LWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVA 133
A A + +A+K + ++ I +RS ++ + Y L+ S+ + +
Sbjct: 269 KCATSKPMFFAEKLHQAMKGIGTRHKTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAIL 328
Query: 134 SHIHGKEKKLLVALVSA 150
G +K+LVAL
Sbjct: 329 DETKGDYEKILVALCGG 345
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
+++ AL KA GVDE T+I IL RQ + + E + + L
Sbjct: 14 SDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIK--AAYLQETGKPLDET-------L 64
Query: 62 KHEFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K VVL + P + DA ++ A+K ++EI ++R++ E+ + Y
Sbjct: 65 KKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINRVY 124
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+ + +D+ S G + L++L R E V ED+A S+A+AL A E++
Sbjct: 125 REELKRDLAKDITSDTSGDFRNALLSLAKGDRSEDFGVNEDLADSDARALYEA---GERR 181
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHY 207
+ + IL+TRS P L+ VF+ Y
Sbjct: 182 KGTDVNVFNTILTTRSYPQLRRVFQKY 208
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 17/142 (11%)
Query: 15 GVDEKTVISILGN-SQPEHRQAFRKEGGFFAEDERRFERWNDHHVKL-----LKHEFMRF 68
G D +IL S P+ R+ F+K + +++ H + LK + +
Sbjct: 183 GTDVNVFNTILTTRSYPQLRRVFQK-----------YTKYSKHDMNKVLDLELKGDIEKC 231
Query: 69 KNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSI 128
A+V A A + +A+K + ++ I +RS ++ + Y ++ S+
Sbjct: 232 LTAIVKCATSKPAFFAEKLHQAMKGVGTRHKALIRIMVSRSEIDMNDIKAFYQKMYGISL 291
Query: 129 EEDVASHIHGKEKKLLVALVSA 150
+ + G +K+LVAL
Sbjct: 292 CQAILDETKGDYEKILVALCGG 313
>pdb|2ZHI|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.58 A Resolution
pdb|2ZHJ|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.34 A Resolution
Length = 322
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 23/218 (10%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHHVK 59
+ L KA G G DE +I +L RQ R G ED
Sbjct: 24 QVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLED------------- 70
Query: 60 LLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARK 118
LK E V+L M P D + ++ A+K ++EI ++R+ +E+ +
Sbjct: 71 -LKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQ 129
Query: 119 AYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAE 178
Y + S+EED+ S +++LV+L + R EG + + + K +A+ L A E
Sbjct: 130 TYQQQYGRSLEEDICSDTSFMFQRVLVSLTAGGRDEGNYLDDALVKQDAQDLYEA---GE 186
Query: 179 KQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
K+ + + + IL +R++ HL VF YK I+ + E
Sbjct: 187 KRWGTDEVKFLSILCSRNRNHLLHVFDEYKRISQKDIE 224
>pdb|1M9I|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant
T356d Of Annexin Vi
Length = 672
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ +AL KA G G DE T+I I+ + RQ R+ + F R D L
Sbjct: 366 ADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTF------KSHFGR--DLMTDLK 417
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
++ M P DA+ +K+A++ ++EI +TR++ E+ +AY
Sbjct: 418 SEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYK 477
Query: 122 SLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEG----PKVKEDVAKSEAKALISAVKNA 177
+ S+E+ ++S G +++L++L + +R EG + +ED A+ A+ L A +
Sbjct: 478 EDYHKSLEDALSSDTSGHFRRILISLATGHREEGGENLDQARED-AQVAAEILEIADTPS 536
Query: 178 EKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
+ +E + IL TRS PHL+ VF+ + ++ E
Sbjct: 537 GDKTSLET-RFMTILCTRSYPHLRRVFQEFIKMTNYDVE 574
Score = 70.1 bits (170), Expect = 9e-13, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAF-RKEGGFFAEDERRFERWNDHHVKLL 61
+ EAL A G G D++ ++ I+ + RQ + + +D + L
Sbjct: 24 DAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKD----------LIADL 73
Query: 62 KHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K+E +F+ +V P DA+ IK+A+ ++EI ++R+++++ AY
Sbjct: 74 KYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAY 133
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+E +E D+ G +K+LV L+ R E V ED+ + + + L A E +
Sbjct: 134 KDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEA---GELK 190
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
+ + + IL RSK HL+ VF Y + G+ E
Sbjct: 191 WGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIE 226
Score = 40.8 bits (94), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKE 140
+ DA+ +++A+K I++I + RS+ + R+ + S F + D+ S I G
Sbjct: 365 DADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDL 424
Query: 141 KKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHL 200
+L++ L+ A +AK L A++ A + ++ IL+TR+ +
Sbjct: 425 ARLILGLMMP-----------PAHYDAKQLKKAMEGAGT----DEKALIEILATRTNAEI 469
Query: 201 KSVFKHYKEIAGQHFED 217
+++ + YKE + ED
Sbjct: 470 RAINEAYKEDYHKSLED 486
Score = 35.4 bits (80), Expect = 0.025, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 82 RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEK 141
+DA + A+K + I++I ++RS+ + ++Y SL+ + D+ + GK +
Sbjct: 23 QDAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFE 82
Query: 142 KLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLK 201
+L+V L+ Y K E K IS + EK ++ IL++R+ +
Sbjct: 83 RLIVGLMRPPAYCDAK--------EIKDAISGIGTDEKC-------LIEILASRTNEQMH 127
Query: 202 SVFKHYKE 209
+ YK+
Sbjct: 128 QLVAAYKD 135
Score = 33.9 bits (76), Expect = 0.079, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 15 GVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE I ILGN +H + + K G E R E L +F +
Sbjct: 192 GTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGE---------LSGDFEKLML 242
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV E A + +A+K ++ ++ I +RS ++L R+ + + +E S+
Sbjct: 243 AVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYS 302
Query: 131 DVASHIHGKEKKLLVAL 147
+ + G+ KK L+ L
Sbjct: 303 MIKNDTSGEYKKTLLKL 319
>pdb|1XJL|A Chain A, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
pdb|1XJL|B Chain B, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
Length = 319
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N E RQ FA +RR ++ LK
Sbjct: 22 IETAIKT---KGVDEVTIVNILTNRSNEQRQDIA-----FAY-QRRTKK---ELASALKS 69
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 70 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 129
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYE-GPKVKEDVAKSEAKALISA-VKNAEKQ 180
+++ +E+D+ S G +KL+VAL R E G + ++ +A+ L A VK
Sbjct: 130 MYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTD 189
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
P + + I++ RS PHL+ VF YK
Sbjct: 190 VP----KWISIMTERSVPHLQKVFDRYK 213
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKE 140
ERDA I+ A+K IV I + RS+++ AY + + + S + G
Sbjct: 16 ERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHL 75
Query: 141 KKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHL 200
+ +++ L+ K+ A+ S +K + K + D ++ I+ +R+ L
Sbjct: 76 ETVILGLL---------------KTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 120
Query: 201 KSVFKHYKEIAGQHFE 216
+ + + YKE+ E
Sbjct: 121 QEINRVYKEMYKTDLE 136
>pdb|1W7B|A Chain A, Annexin A2: Does It Induce Membrane Aggregation By A New
Multimeric State Of The Protein
Length = 339
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N E RQ FA +RR ++ LK
Sbjct: 42 IETAIKT---KGVDEVTIVNILTNRSNEQRQDIA-----FAY-QRRTKK---ELASALKS 89
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 90 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 149
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYE-GPKVKEDVAKSEAKALISA-VKNAEKQ 180
+++ +E+D+ S G +KL+VAL R E G + ++ +A+ L A VK
Sbjct: 150 MYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTD 209
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
P + + I++ RS PHL+ VF YK
Sbjct: 210 VP----KWISIMTERSVPHLQKVFDRYK 233
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKE 140
ERDA I+ A+K IV I + RS+++ AY + + + S + G
Sbjct: 36 ERDALNIETAIKTKGVDEVTIVNILTNRSNEQRQDIAFAYQRRTKKELASALKSALSGHL 95
Query: 141 KKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHL 200
+ +++ L+ K+ A+ S +K + K + D ++ I+ +R+ L
Sbjct: 96 ETVILGLL---------------KTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 140
Query: 201 KSVFKHYKEIAGQHFE 216
+ + + YKE+ E
Sbjct: 141 QEINRVYKEMYKTDLE 156
>pdb|1AVC|A Chain A, Bovine Annexin Vi (Calcium-Bound)
Length = 673
Score = 70.5 bits (171), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAF-RKEGGFFAEDERRFERWNDHHVKLL 61
+ E L A G G D++ +I+++ + + RQ + + +D + L
Sbjct: 25 DAETLYNAMKGFGSDKEAIINLITSRSNKQRQEICQNYKSLYGKD----------LIADL 74
Query: 62 KHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K+E +F+ +V P DA+ IK+A+ ++EI ++R+++++ AY
Sbjct: 75 KYELTGKFERLIVGLMRPPAYADAKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAY 134
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
+E +E D+ G +K+LV L+ R E V ED+ + + + L A E +
Sbjct: 135 KDAYERDLEADITGDTSGHFRKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEA---GELK 191
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
+ + + IL RSK HL+ VF Y + G+ E
Sbjct: 192 WGTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIE 227
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ +AL KA G G DE T+I I+ + RQ R+ + F R D L
Sbjct: 367 ADAKALRKAMKGLGTDEDTIIDIITHRSNAQRQQIRQTF------KSHFGR--DLMADLK 418
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
++ M P DA+ +K+A++ ++EI +TR++ E+ KAY
Sbjct: 419 SELSGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIQAINKAYK 478
Query: 122 SLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEG----PKVKEDVAKSEAKALISAVKNA 177
+ ++E+ ++S G K++L++L + R EG + +ED A+ A+ L A +
Sbjct: 479 EDYHKTLEDALSSDTSGHFKRILISLATGNREEGGEDRERARED-AQVAAEILEIADTTS 537
Query: 178 EKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
++ +E + IL TRS P L+ VF+ + ++ E
Sbjct: 538 GDKSSLET-RFMMILCTRSYPDLRRVFQEFVKMTNYDVE 575
Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKE 140
+ DA+ +++A+K I++I + RS+ + R+ + S F + D+ S + G
Sbjct: 366 DADAKALRKAMKGLGTDEDTIIDIITHRSNAQRQQIRQTFKSHFGRDLMADLKSELSGDL 425
Query: 141 KKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHL 200
+L++ L+ A +AK L A++ A + ++ IL+TR+ +
Sbjct: 426 ARLILGLMMP-----------PAHYDAKQLKKAMEGAGT----DEKALIEILATRTNAEI 470
Query: 201 KSVFKHYKEIAGQHFED 217
+++ K YKE + ED
Sbjct: 471 QAINKAYKEDYHKTLED 487
Score = 34.3 bits (77), Expect = 0.052, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 82 RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEK 141
+DA + A+K + I+ + ++RS+ + + Y SL+ + D+ + GK +
Sbjct: 24 QDAETLYNAMKGFGSDKEAIINLITSRSNKQRQEICQNYKSLYGKDLIADLKYELTGKFE 83
Query: 142 KLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHLK 201
+L+V L+ Y K E K IS + EK ++ IL++R+ +
Sbjct: 84 RLIVGLMRPPAYADAK--------EIKDAISGIGTDEKC-------LIEILASRTNEQIH 128
Query: 202 SVFKHYKE 209
+ YK+
Sbjct: 129 QLVAAYKD 136
Score = 33.9 bits (76), Expect = 0.065, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 15 GVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE I ILGN +H + + K G E R E L +F +
Sbjct: 193 GTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGE---------LSGDFEKLML 243
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV E A + +A+K ++ ++ I +RS ++L R+ + + +E S+
Sbjct: 244 AVVKCIRSTAEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYS 303
Query: 131 DVASHIHGKEKKLLVAL 147
+ + G+ KK L+ L
Sbjct: 304 MIKNDTSGEYKKTLLKL 320
>pdb|2ZOC|A Chain A, Crystal Structure Of Recombinant Human Annexin Iv
pdb|2ZOC|B Chain B, Crystal Structure Of Recombinant Human Annexin Iv
Length = 319
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 1 MAEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKL 60
M + + L KA G G DE +IS+L RQ R + + R +
Sbjct: 17 MEDAQTLRKAMKGLGTDEDAIISVLAYRNTAQRQEIRT--AYKSTIGRDL-------IDD 67
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
LK E V++ M P D + ++ A+K ++EI ++R+ +E+ +
Sbjct: 68 LKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQT 127
Query: 120 YHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEK 179
Y + S+E+D+ S +++LV+L + R EG + + + + +A+ L A EK
Sbjct: 128 YQQQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDEGNYLDDALVRQDAQDLYEA---GEK 184
Query: 180 QNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
+ + + + +L +R++ HL VF YK I+ + E
Sbjct: 185 KWGTDEVKFLTVLCSRNRNHLLHVFDEYKRISQKDIE 221
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 1 MAEIEALIKAFSGHGVDEKTVISILGNSQPEH----RQAFRKEGGFFAEDERR------F 50
+ +++ L +A G G DE +I IL + PE Q ++++ G ED+ R F
Sbjct: 89 LYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQTYQQQYGRSLEDDIRSDTSFMF 148
Query: 51 ERWNDHHVKLLKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSV-IVEIASTRS 109
+R + E +A+V +DA+ + EA +K ++ V + + +R+
Sbjct: 149 QRVLVSLSAGGRDEGNYLDDALV-------RQDAQDLYEAGEKKWGTDEVKFLTVLCSRN 201
Query: 110 SDELLGARKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKA 169
+ LL Y + + IE+ + S G + L+A+V R + E + KS K
Sbjct: 202 RNHLLHVFDEYKRISQKDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAEKLYKS-MKG 260
Query: 170 LISAVKNAEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHF 215
L +++ ++R++ +R++ + + H+K + G+
Sbjct: 261 L-----------GTDDNTLIRVMVSRAEIDMLDIRAHFKRLYGKSL 295
>pdb|2HYU|A Chain A, Human Annexin A2 With Heparin Tetrasaccharide Bound
pdb|2HYV|A Chain A, Human Annexin A2 With Heparin Hexasaccharide Bound
pdb|2HYW|A Chain A, Human Annexin A2 With Calcium Bound
pdb|2HYW|B Chain B, Human Annexin A2 With Calcium Bound
Length = 308
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N RQ FA +RR ++ LK
Sbjct: 11 IETAIKT---KGVDEVTIVNILTNRSNAQRQDIA-----FAY-QRRTKK---ELASALKS 58
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 59 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 118
Query: 123 LFEHSIEEDVASHIHGKEKKLLVALVSAYRYE-GPKVKEDVAKSEAKALISA-VKNAEKQ 180
+++ +E+D+ S G +KL+VAL R E G + ++ +A+ L A VK
Sbjct: 119 MYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTD 178
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYK 208
P + + I++ RS PHL+ VF YK
Sbjct: 179 VP----KWISIMTERSVPHLQKVFDRYK 202
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKE 140
ERDA I+ A+K IV I + RS+ + AY + + + S + G
Sbjct: 5 ERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELASALKSALSGHL 64
Query: 141 KKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIENDEVVRILSTRSKPHL 200
+ +++ L+ K+ A+ S +K + K + D ++ I+ +R+ L
Sbjct: 65 ETVILGLL---------------KTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 109
Query: 201 KSVFKHYKEIAGQHFE 216
+ + + YKE+ E
Sbjct: 110 QEINRVYKEMYKTDLE 125
>pdb|1AOW|A Chain A, Annexin Iv
Length = 309
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 23/218 (10%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHHVK 59
+ L KA G G DE +I++L RQ R G +D
Sbjct: 11 QTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD------------- 57
Query: 60 LLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARK 118
LK E V+L M P D + +++A+K ++EI ++R+ +E+ +
Sbjct: 58 -LKSELSGNFEQVILGMMTPTVLYDVQEVRKAMKGAGTDEGCLIEILASRTPEEIRRINQ 116
Query: 119 AYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAE 178
Y + S+E+D+ S +++LV+L + R E + + + + +A+ L A E
Sbjct: 117 TYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEA---GE 173
Query: 179 KQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
K+ + + + +L +R++ HL VF YK IA + E
Sbjct: 174 KKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIE 211
>pdb|1I4A|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant T6d
Of Annexin Iv
Length = 318
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I++L RQ R G +D
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD----------- 66
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + +++A+K ++EI ++R+ +E+
Sbjct: 67 ---LKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRI 123
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
+ Y + S+E+D+ S +++LV+L + R E + + + + +A+ L A
Sbjct: 124 NQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEA--- 180
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
EK+ + + + +L +R++ HL VF YK IA + E
Sbjct: 181 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIE 220
>pdb|1ANN|A Chain A, Annexin Iv
Length = 318
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I++L RQ R G +D
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD----------- 66
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + +++A+K ++EI ++R+ +E+
Sbjct: 67 ---LKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRI 123
Query: 117 RKAYHSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKN 176
+ Y + S+E+D+ S +++LV+L + R E + + + + +A+ L A
Sbjct: 124 NQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMRQDAQDLYEA--- 180
Query: 177 AEKQNPIENDEVVRILSTRSKPHLKSVFKHYKEIAGQHFE 216
EK+ + + + +L +R++ HL VF YK IA + E
Sbjct: 181 GEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIE 220
>pdb|1DM5|A Chain A, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|B Chain B, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|C Chain C, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|D Chain D, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|E Chain E, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|F Chain F, Annexin Xii E105k Homohexamer Crystal Structure
Length = 315
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG----GFFAEDERRFERWNDHHVKL 60
E L KA G G DEK++ IL RQ + + G EDE + E +
Sbjct: 19 ETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGN----- 73
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
++ A + P E A + A+K + +++I T+S+ ++ + A+
Sbjct: 74 -------YEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAF 126
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
L++ +E+++ S G ++LLV+++ R E V A +A A+ A E Q
Sbjct: 127 KLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQA---GEGQ 183
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIA 211
+ +L+TRS P L +F Y +I+
Sbjct: 184 IGTDESRFNAVLATRSYPQLHQIFHEYSKIS 214
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I I +TRS+ + + Y +LF +E+++ S + G +
Sbjct: 17 DAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEA 76
Query: 143 LLVALV 148
+AL+
Sbjct: 77 AALALL 82
>pdb|1AEI|A Chain A, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|B Chain B, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|C Chain C, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|D Chain D, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|E Chain E, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|F Chain F, Crystal Structure Of The Annexin Xii Hexamer
Length = 315
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG----GFFAEDERRFERWNDHHVKL 60
E L KA G G DEK++ IL RQ + + G EDE + E +
Sbjct: 19 ETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGN----- 73
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
++ A + P E A + A+K + +++I T+S+ ++ + A+
Sbjct: 74 -------YEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAF 126
Query: 121 HSLFEHSIEEDVASHIHGKEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQ 180
L++ +E+++ S G ++LLV+++ R E V A +A A+ A E Q
Sbjct: 127 KLLYKEDLEKEIISETSGNFQRLLVSMLQGGRKEDEPVNAAHAAEDAAAIYQA---GEGQ 183
Query: 181 NPIENDEVVRILSTRSKPHLKSVFKHYKEIA 211
+ +L+TRS P L +F Y +I+
Sbjct: 184 IGTDESRFNAVLATRSYPQLHQIFHEYSKIS 214
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I I +TRS+ + + Y +LF +E+++ S + G +
Sbjct: 17 DAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYEA 76
Query: 143 LLVALV 148
+AL+
Sbjct: 77 AALALL 82
>pdb|4A2P|A Chain A, Structure Of Duck Rig-I Helicase Domain
pdb|4A36|A Chain A, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
pdb|4A36|B Chain B, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
Dsrna And Atp Transition State Analogue
Length = 556
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 139 KEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIEN 185
K ++L+ L AYRY P+ + + ++ +AL+SA+K ++NPI N
Sbjct: 373 KLEELVCILDDAYRY-NPQTR-TLLFAKTRALVSALKKCMEENPILN 417
>pdb|1W61|A Chain A, Proline Racemase In Complex With 2 Molecules Of
Pyrrole-2- Carboxylic Acid (Holo Form)
pdb|1W61|B Chain B, Proline Racemase In Complex With 2 Molecules Of
Pyrrole-2- Carboxylic Acid (Holo Form)
pdb|1W62|A Chain A, Proline Racemase In Complex With One Molecule Of
Pyrrole-2- Carboxylic Acid (hemi Form)
pdb|1W62|B Chain B, Proline Racemase In Complex With One Molecule Of
Pyrrole-2- Carboxylic Acid (hemi Form)
Length = 414
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSN 98
K E MRFK + MH AR++ L P SN
Sbjct: 36 KREIMRFKKSFTCIDMHTEGEAARIVTSGLPHIPGSN 72
>pdb|1BO9|A Chain A, Nmr Solution Structure Of Domain 1 Of Human Annexin I
Length = 73
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGG 41
+++ AL KA GVDE T+I IL RQ A+ +E G
Sbjct: 6 SDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETG 49
>pdb|4A2Q|A Chain A, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
pdb|4A2Q|B Chain B, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
pdb|4A2Q|D Chain D, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
pdb|4A2Q|E Chain E, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
Length = 797
Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 139 KEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIEN 185
K ++L+ L AYRY P+ + + ++ +AL+SA+K ++NPI N
Sbjct: 614 KLEELVCILDDAYRYN-PQTRT-LLFAKTRALVSALKKCMEENPILN 658
>pdb|4A2W|A Chain A, Structure Of Full-Length Duck Rig-I
pdb|4A2W|B Chain B, Structure Of Full-Length Duck Rig-I
Length = 936
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 139 KEKKLLVALVSAYRYEGPKVKEDVAKSEAKALISAVKNAEKQNPIEN 185
K ++L+ L AYRY P+ + + ++ +AL+SA+K ++NPI N
Sbjct: 614 KLEELVCILDDAYRYN-PQTRT-LLFAKTRALVSALKKCMEENPILN 658
>pdb|2WVV|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
pdb|2WVV|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
pdb|2WVV|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
Length = 450
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 130 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 184
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 185 RYPTVKDFWFDGTWD 199
>pdb|2WVV|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
Length = 450
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 130 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 184
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 185 RYPTVKDFWFDGTWD 199
>pdb|2XIB|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XII|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With An Extended
9- Fluorenone Iminosugar Inhibitor
pdb|2XII|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With An Extended
9- Fluorenone Iminosugar Inhibitor
Length = 453
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 133 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 187
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 188 RYPTVKDFWFDGTWD 202
>pdb|2WVT|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With A Novel
Iminosugar Fucosidase Inhibitor
pdb|2WVT|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With A Novel
Iminosugar Fucosidase Inhibitor
pdb|2WVU|A Chain A, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|B Chain B, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|C Chain C, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|D Chain D, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
Length = 443
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 134 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 188
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 189 RYPTVKDFWFDGTWD 203
>pdb|2WVS|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
Length = 443
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 134 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 188
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 189 RYPTVKDFWFDGTWD 203
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,414,946
Number of Sequences: 62578
Number of extensions: 246116
Number of successful extensions: 906
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 641
Number of HSP's gapped (non-prelim): 141
length of query: 219
length of database: 14,973,337
effective HSP length: 95
effective length of query: 124
effective length of database: 9,028,427
effective search space: 1119524948
effective search space used: 1119524948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)