Query 027788
Match_columns 219
No_of_seqs 106 out of 1289
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 15:12:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027788.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027788hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0595 Serine/threonine-prote 100.0 4.5E-42 9.8E-47 270.6 14.7 191 20-217 6-207 (429)
2 KOG0615 Serine/threonine prote 100.0 3.7E-39 8E-44 254.4 16.0 192 24-219 171-374 (475)
3 KOG0575 Polo-like serine/threo 100.0 7E-39 1.5E-43 263.4 18.1 190 18-213 11-205 (592)
4 KOG0581 Mitogen-activated prot 100.0 4.8E-39 1E-43 251.1 16.1 180 31-218 85-271 (364)
5 KOG0598 Ribosomal protein S6 k 100.0 3.2E-38 7E-43 246.3 13.1 187 24-216 24-215 (357)
6 KOG0584 Serine/threonine prote 100.0 2.3E-38 4.9E-43 261.0 9.7 203 10-213 25-230 (632)
7 KOG0616 cAMP-dependent protein 100.0 9.8E-37 2.1E-41 231.8 13.4 183 28-218 47-235 (355)
8 KOG0600 Cdc2-related protein k 100.0 1E-36 2.3E-41 245.8 13.5 185 24-215 117-310 (560)
9 KOG0591 NIMA (never in mitosis 100.0 1.1E-38 2.5E-43 241.1 2.1 186 24-213 19-215 (375)
10 KOG0583 Serine/threonine prote 100.0 6.8E-36 1.5E-40 243.4 16.9 189 21-214 14-211 (370)
11 KOG0582 Ste20-like serine/thre 100.0 1.2E-35 2.7E-40 236.6 17.8 192 18-217 19-223 (516)
12 KOG0663 Protein kinase PITSLRE 100.0 2.3E-36 4.9E-41 233.3 12.2 190 20-216 72-269 (419)
13 KOG0659 Cdk activating kinase 100.0 2.4E-36 5.2E-41 226.6 11.4 183 25-216 3-193 (318)
14 KOG0592 3-phosphoinositide-dep 100.0 1.7E-36 3.7E-41 246.4 10.8 182 27-214 75-275 (604)
15 KOG0593 Predicted protein kina 100.0 9E-36 1.9E-40 227.4 8.8 182 24-213 2-189 (396)
16 KOG0611 Predicted serine/threo 100.0 7.1E-36 1.5E-40 236.2 8.4 185 25-215 53-242 (668)
17 KOG0661 MAPK related serine/th 100.0 2.5E-36 5.4E-41 242.1 5.8 184 21-213 7-197 (538)
18 KOG0197 Tyrosine kinases [Sign 100.0 9.7E-35 2.1E-39 236.1 14.1 183 19-213 200-391 (468)
19 KOG0578 p21-activated serine/t 100.0 2.2E-35 4.7E-40 241.1 10.3 189 18-217 267-460 (550)
20 KOG0198 MEKK and related serin 100.0 5.4E-34 1.2E-38 224.8 16.6 183 25-213 17-209 (313)
21 KOG0192 Tyrosine kinase specif 100.0 3.5E-34 7.6E-39 231.8 15.8 184 28-217 44-239 (362)
22 KOG0658 Glycogen synthase kina 100.0 3.4E-34 7.4E-39 223.6 11.4 177 26-213 25-213 (364)
23 KOG0577 Serine/threonine prote 100.0 9.7E-35 2.1E-39 238.6 8.1 208 2-217 1-216 (948)
24 KOG1187 Serine/threonine prote 100.0 1.9E-33 4.2E-38 228.5 15.6 180 28-214 78-266 (361)
25 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-33 3.5E-38 219.5 14.3 183 24-213 11-208 (323)
26 KOG0605 NDR and related serine 100.0 1.6E-33 3.5E-38 228.8 13.6 150 27-182 143-292 (550)
27 cd05626 STKc_LATS2 Catalytic d 100.0 1E-32 2.2E-37 227.6 18.3 149 27-181 3-151 (381)
28 KOG1989 ARK protein kinase fam 100.0 4.3E-33 9.3E-38 237.5 16.5 193 18-215 30-247 (738)
29 cd05628 STKc_NDR1 Catalytic do 100.0 6.6E-33 1.4E-37 227.3 16.5 150 27-182 3-152 (363)
30 KOG0660 Mitogen-activated prot 100.0 1.8E-33 3.8E-38 219.2 12.2 188 22-216 20-219 (359)
31 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-32 2.7E-37 226.7 17.9 148 27-180 3-150 (377)
32 cd05599 STKc_NDR_like Catalyti 100.0 9.7E-33 2.1E-37 226.3 17.1 150 27-182 3-152 (364)
33 PTZ00263 protein kinase A cata 100.0 1.1E-32 2.3E-37 223.2 17.0 183 24-214 18-203 (329)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-32 3.2E-37 222.7 17.4 181 27-214 3-186 (333)
35 cd05571 STKc_PKB Catalytic dom 100.0 1.7E-32 3.7E-37 221.5 17.5 177 31-214 1-183 (323)
36 KOG0201 Serine/threonine prote 100.0 1.4E-34 3.1E-39 230.0 4.9 188 20-217 9-202 (467)
37 KOG0585 Ca2+/calmodulin-depend 100.0 2.4E-33 5.3E-38 225.0 11.7 185 27-214 99-307 (576)
38 cd05598 STKc_LATS Catalytic do 100.0 2.6E-32 5.7E-37 224.7 17.7 148 27-180 3-150 (376)
39 KOG0597 Serine-threonine prote 100.0 1E-33 2.2E-38 231.5 9.1 180 28-215 5-189 (808)
40 cd05612 STKc_PRKX_like Catalyt 100.0 5E-33 1.1E-37 221.5 12.9 180 27-213 3-185 (291)
41 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-32 7.4E-37 224.5 17.8 148 27-180 3-150 (382)
42 KOG0588 Serine/threonine prote 100.0 5.2E-33 1.1E-37 230.7 11.9 185 26-216 13-202 (786)
43 KOG0194 Protein tyrosine kinas 100.0 2.2E-32 4.7E-37 225.0 15.5 190 21-217 153-355 (474)
44 KOG0032 Ca2+/calmodulin-depend 100.0 6.4E-32 1.4E-36 220.3 17.9 185 23-213 33-225 (382)
45 cd05627 STKc_NDR2 Catalytic do 100.0 6.6E-32 1.4E-36 221.1 18.0 150 27-182 3-152 (360)
46 KOG0586 Serine/threonine prote 100.0 5.5E-32 1.2E-36 223.0 16.7 190 22-218 53-249 (596)
47 PTZ00426 cAMP-dependent protei 100.0 7.5E-32 1.6E-36 219.2 17.2 183 24-214 30-216 (340)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 9.3E-32 2E-36 217.7 17.7 177 31-214 1-183 (328)
49 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-31 2.3E-36 220.6 18.1 183 25-214 43-235 (370)
50 cd05594 STKc_PKB_alpha Catalyt 100.0 1.6E-31 3.4E-36 216.1 18.7 176 31-213 1-183 (325)
51 cd05585 STKc_YPK1_like Catalyt 100.0 8.6E-32 1.9E-36 216.4 16.9 175 33-214 1-181 (312)
52 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-31 2.6E-36 217.3 17.6 183 27-214 2-195 (332)
53 cd05595 STKc_PKB_beta Catalyti 100.0 6.7E-32 1.5E-36 218.1 16.0 177 31-214 1-183 (323)
54 KOG0589 Serine/threonine prote 100.0 6.5E-33 1.4E-37 224.5 9.6 183 24-213 4-193 (426)
55 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-31 5.1E-36 211.3 18.4 181 27-214 2-189 (285)
56 cd05601 STKc_CRIK Catalytic do 100.0 2E-31 4.2E-36 215.9 18.2 182 27-214 3-197 (330)
57 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.5E-32 1.8E-36 219.5 15.8 152 27-184 3-154 (350)
58 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.4E-32 1.8E-36 215.5 15.2 181 24-214 5-192 (303)
59 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-31 3.2E-36 212.7 15.6 180 24-213 5-191 (288)
60 cd05622 STKc_ROCK1 Catalytic d 100.0 3.8E-31 8.3E-36 217.4 18.1 185 23-214 41-235 (371)
61 cd05575 STKc_SGK Catalytic dom 100.0 2.9E-31 6.2E-36 214.3 16.8 177 31-214 1-184 (323)
62 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-31 3.5E-36 216.9 15.4 181 25-213 7-263 (338)
63 cd05588 STKc_aPKC Catalytic do 100.0 4E-31 8.6E-36 214.1 17.5 176 31-213 1-183 (329)
64 cd05596 STKc_ROCK Catalytic do 100.0 3.9E-31 8.5E-36 217.3 17.6 183 24-214 43-235 (370)
65 cd05624 STKc_MRCK_beta Catalyt 100.0 5E-31 1.1E-35 213.7 18.0 182 27-214 3-196 (331)
66 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-31 6.7E-36 214.2 16.7 177 31-213 2-187 (323)
67 cd05597 STKc_DMPK_like Catalyt 100.0 4E-31 8.7E-36 214.2 17.2 182 27-214 3-196 (331)
68 cd05603 STKc_SGK2 Catalytic do 100.0 3.5E-31 7.5E-36 213.7 16.8 177 31-214 1-184 (321)
69 cd05604 STKc_SGK3 Catalytic do 100.0 4.2E-31 9.1E-36 213.5 17.2 177 31-214 1-184 (325)
70 cd05618 STKc_aPKC_iota Catalyt 100.0 5.4E-31 1.2E-35 213.3 17.3 177 31-214 1-184 (329)
71 cd05602 STKc_SGK1 Catalytic do 100.0 3.6E-31 7.8E-36 213.9 16.2 176 31-213 1-183 (325)
72 cd05587 STKc_cPKC Catalytic do 100.0 5.7E-31 1.2E-35 212.7 17.3 181 27-214 2-189 (324)
73 KOG0694 Serine/threonine prote 100.0 2.3E-31 5E-36 221.8 15.0 184 24-214 367-556 (694)
74 KOG0580 Serine/threonine prote 100.0 7.3E-33 1.6E-37 205.1 5.2 183 27-216 24-212 (281)
75 KOG0667 Dual-specificity tyros 100.0 1E-30 2.2E-35 217.1 18.3 188 18-216 179-379 (586)
76 cd05616 STKc_cPKC_beta Catalyt 100.0 9.3E-31 2E-35 211.4 17.8 181 27-214 2-189 (323)
77 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.7E-31 8E-36 214.6 15.5 182 27-214 2-196 (338)
78 cd06649 PKc_MEK2 Catalytic dom 100.0 8.6E-31 1.9E-35 212.3 17.6 179 26-213 6-189 (331)
79 cd05592 STKc_nPKC_theta_delta 100.0 4.6E-31 1E-35 212.6 15.8 176 31-213 1-183 (316)
80 cd05582 STKc_RSK_N N-terminal 100.0 9.4E-31 2E-35 210.9 17.3 175 31-213 2-185 (318)
81 KOG4250 TANK binding protein k 100.0 7.3E-32 1.6E-36 225.4 10.9 190 25-219 13-217 (732)
82 cd05591 STKc_nPKC_epsilon Cata 100.0 7.6E-31 1.6E-35 211.7 16.4 177 31-214 1-184 (321)
83 cd05623 STKc_MRCK_alpha Cataly 100.0 1.2E-30 2.6E-35 211.5 17.5 181 27-213 3-195 (332)
84 KOG1026 Nerve growth factor re 100.0 6.6E-32 1.4E-36 229.7 10.5 182 28-217 489-698 (774)
85 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-30 2.4E-35 209.1 17.0 180 24-213 5-227 (304)
86 PTZ00036 glycogen synthase kin 100.0 4.7E-31 1E-35 221.2 15.4 177 26-213 67-258 (440)
87 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-30 3.6E-35 210.3 17.7 176 31-213 1-183 (327)
88 cd05590 STKc_nPKC_eta Catalyti 100.0 7.3E-31 1.6E-35 211.8 15.3 176 31-213 1-183 (320)
89 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-30 3.2E-35 210.7 17.1 176 33-214 1-185 (330)
90 cd07848 STKc_CDKL5 Catalytic d 100.0 6.3E-31 1.4E-35 208.7 14.4 180 27-214 3-189 (287)
91 KOG4236 Serine/threonine prote 100.0 6.2E-31 1.3E-35 214.0 14.5 176 31-213 570-753 (888)
92 KOG4279 Serine/threonine prote 100.0 1.7E-31 3.7E-36 223.1 11.2 174 32-213 582-765 (1226)
93 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-30 2.6E-35 211.6 15.6 179 26-213 6-189 (333)
94 KOG4717 Serine/threonine prote 100.0 1.9E-31 4.2E-36 216.5 10.8 188 19-213 13-206 (864)
95 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-30 3.3E-35 210.2 16.0 180 28-214 3-189 (323)
96 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-30 3.4E-35 210.1 15.6 179 27-213 1-188 (324)
97 cd05605 STKc_GRK4_like Catalyt 100.0 4.2E-30 9.2E-35 204.0 17.7 180 27-213 2-188 (285)
98 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.5E-30 9.7E-35 203.7 17.5 185 23-214 2-200 (284)
99 PTZ00283 serine/threonine prot 100.0 3.7E-30 8.1E-35 218.4 18.1 185 22-213 30-232 (496)
100 PTZ00267 NIMA-related protein 100.0 3.2E-30 7E-35 218.3 17.5 182 22-213 64-258 (478)
101 cd05570 STKc_PKC Catalytic dom 100.0 1.9E-30 4.2E-35 209.1 15.4 176 31-213 1-183 (318)
102 cd05104 PTKc_Kit Catalytic dom 100.0 2.9E-30 6.2E-35 212.5 16.2 179 26-213 36-303 (375)
103 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-30 5.9E-35 208.1 15.7 176 31-213 1-183 (316)
104 cd05619 STKc_nPKC_theta Cataly 100.0 2.7E-30 5.8E-35 208.1 15.6 177 31-214 1-184 (316)
105 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.9E-30 1.1E-34 203.3 16.6 183 23-213 2-197 (283)
106 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-30 3.8E-35 213.6 14.2 180 28-213 3-192 (372)
107 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.5E-30 1.6E-34 202.2 17.3 181 25-213 4-198 (284)
108 cd06625 STKc_MEKK3_like Cataly 100.0 9.4E-30 2E-34 199.3 17.3 182 27-213 4-194 (263)
109 KOG0193 Serine/threonine prote 100.0 7.3E-31 1.6E-35 216.1 11.3 186 18-214 385-581 (678)
110 PHA03212 serine/threonine kina 100.0 3.3E-30 7.2E-35 213.1 15.1 171 26-213 93-270 (391)
111 PLN00034 mitogen-activated pro 100.0 4.8E-30 1E-34 209.6 15.8 175 28-214 77-261 (353)
112 cd05608 STKc_GRK1 Catalytic do 100.0 4.7E-30 1E-34 203.3 15.3 174 33-213 1-184 (280)
113 PTZ00266 NIMA-related protein 100.0 8E-30 1.7E-34 225.5 18.3 187 25-213 13-230 (1021)
114 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-29 2.6E-34 199.2 17.4 183 27-213 4-196 (265)
115 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.9E-30 8.3E-35 206.5 14.7 180 24-213 6-192 (309)
116 KOG0579 Ste20-like serine/thre 100.0 3.3E-32 7.2E-37 225.5 2.6 184 25-217 32-226 (1187)
117 KOG0574 STE20-like serine/thre 100.0 2.1E-32 4.5E-37 209.5 1.2 183 24-217 32-220 (502)
118 PF00069 Pkinase: Protein kina 100.0 3.2E-30 7E-35 201.4 13.3 179 27-213 1-186 (260)
119 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.4E-30 1.8E-34 200.3 15.8 180 25-213 5-195 (266)
120 cd05106 PTKc_CSF-1R Catalytic 100.0 7.2E-30 1.6E-34 210.1 15.7 179 26-213 39-301 (374)
121 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-29 2.3E-34 204.6 16.2 177 27-213 9-198 (316)
122 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-29 2.6E-34 197.7 15.7 175 31-213 1-183 (252)
123 PHA02988 hypothetical protein; 100.0 8.6E-30 1.9E-34 202.2 15.0 176 31-213 26-209 (283)
124 cd05607 STKc_GRK7 Catalytic do 100.0 1.8E-29 3.8E-34 199.7 16.8 174 33-213 1-181 (277)
125 KOG0196 Tyrosine kinase, EPH ( 100.0 1.9E-30 4.1E-35 218.8 11.7 189 20-216 624-826 (996)
126 cd07876 STKc_JNK2 Catalytic do 100.0 2E-29 4.2E-34 206.4 17.3 183 22-214 19-210 (359)
127 cd06615 PKc_MEK Catalytic doma 100.0 2.1E-29 4.6E-34 202.1 17.1 178 27-213 3-185 (308)
128 cd07862 STKc_CDK6 Catalytic do 100.0 2.3E-29 5E-34 200.0 16.8 180 27-213 3-196 (290)
129 KOG0599 Phosphorylase kinase g 100.0 9.6E-31 2.1E-35 197.8 8.2 178 31-213 23-215 (411)
130 cd07868 STKc_CDK8 Catalytic do 100.0 9E-30 1.9E-34 204.9 14.4 176 30-214 6-204 (317)
131 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.1E-30 1.8E-34 207.4 14.3 183 23-213 14-203 (343)
132 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-29 3.6E-34 198.5 15.6 183 21-213 6-196 (267)
133 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.7E-29 8.1E-34 196.3 17.5 183 27-213 4-196 (264)
134 cd07875 STKc_JNK1 Catalytic do 100.0 2.3E-29 4.9E-34 206.4 16.5 183 22-214 22-213 (364)
135 cd05630 STKc_GRK6 Catalytic do 100.0 4.4E-29 9.6E-34 198.2 17.5 180 28-214 3-189 (285)
136 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-29 2.9E-34 199.1 14.3 182 23-214 8-197 (267)
137 cd05632 STKc_GRK5 Catalytic do 100.0 5.3E-29 1.1E-33 197.8 17.8 180 28-214 3-189 (285)
138 PRK13184 pknD serine/threonine 100.0 2.3E-29 5.1E-34 221.6 17.2 182 24-213 2-218 (932)
139 KOG0662 Cyclin-dependent kinas 100.0 2.2E-30 4.8E-35 185.2 8.7 178 31-216 8-193 (292)
140 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.5E-29 5.4E-34 199.2 15.6 180 27-213 3-188 (286)
141 cd05580 STKc_PKA Catalytic dom 100.0 4.1E-29 8.9E-34 198.8 16.6 180 27-213 3-185 (290)
142 PF07714 Pkinase_Tyr: Protein 100.0 1.7E-29 3.7E-34 198.0 14.0 181 28-217 2-198 (259)
143 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.6E-29 7.8E-34 207.3 16.6 178 27-213 39-326 (400)
144 cd08529 STKc_FA2-like Catalyti 100.0 8E-29 1.7E-33 193.2 17.6 179 28-213 3-188 (256)
145 cd06630 STKc_MEKK1 Catalytic d 100.0 2.8E-29 6E-34 197.2 14.9 182 27-213 2-195 (268)
146 KOG1094 Discoidin domain recep 100.0 6.6E-30 1.4E-34 209.8 11.6 185 24-217 537-732 (807)
147 cd07874 STKc_JNK3 Catalytic do 100.0 3.2E-29 7E-34 204.9 15.7 183 22-214 15-206 (355)
148 cd07863 STKc_CDK4 Catalytic do 100.0 4.3E-29 9.4E-34 198.2 16.0 181 27-214 2-195 (288)
149 cd06651 STKc_MEKK3 Catalytic d 100.0 9.8E-29 2.1E-33 194.1 17.6 183 27-213 4-196 (266)
150 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.3E-29 7.1E-34 200.3 15.1 180 24-213 6-192 (301)
151 cd06644 STKc_STK10_LOK Catalyt 100.0 8.9E-29 1.9E-33 196.9 17.3 182 22-213 10-202 (292)
152 KOG1095 Protein tyrosine kinas 100.0 1.5E-29 3.3E-34 222.1 13.8 186 24-217 691-897 (1025)
153 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-28 2.8E-33 193.7 17.7 179 26-213 5-198 (269)
154 cd07867 STKc_CDC2L6 Catalytic 100.0 4.5E-29 9.8E-34 200.7 15.2 176 29-213 5-203 (317)
155 cd07861 STKc_CDK1_euk Catalyti 100.0 4.1E-29 9E-34 197.9 14.8 179 28-214 3-190 (285)
156 cd05088 PTKc_Tie2 Catalytic do 100.0 9.7E-29 2.1E-33 197.9 16.9 178 27-213 9-210 (303)
157 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-29 8E-34 197.9 14.4 181 23-213 4-195 (280)
158 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-28 2.3E-33 194.0 16.6 179 26-213 5-196 (267)
159 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7E-29 1.5E-33 197.4 15.7 180 24-213 5-191 (291)
160 cd08219 STKc_Nek3 Catalytic do 100.0 2.3E-28 4.9E-33 190.8 18.3 177 28-213 3-187 (255)
161 cd05054 PTKc_VEGFR Catalytic d 100.0 3.8E-29 8.3E-34 203.1 14.3 182 25-214 7-263 (337)
162 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-28 3.5E-33 192.1 17.2 181 23-213 2-191 (262)
163 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-28 3.5E-33 192.9 17.3 179 27-213 6-195 (266)
164 cd08221 STKc_Nek9 Catalytic do 100.0 1.8E-28 4E-33 191.3 17.5 178 28-213 3-188 (256)
165 cd07839 STKc_CDK5 Catalytic do 100.0 1.5E-29 3.3E-34 200.4 11.5 179 28-214 3-188 (284)
166 cd08228 STKc_Nek6 Catalytic do 100.0 1E-28 2.3E-33 193.9 16.1 180 27-213 4-193 (267)
167 cd06619 PKc_MKK5 Catalytic dom 100.0 1.2E-28 2.6E-33 195.1 16.2 174 27-213 3-180 (279)
168 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-28 2.2E-33 195.6 15.7 178 27-213 7-213 (283)
169 cd08227 PK_STRAD_alpha Pseudok 100.0 7.7E-29 1.7E-33 200.5 15.2 179 29-214 2-198 (327)
170 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-28 3.6E-33 194.1 16.8 180 24-213 6-198 (279)
171 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-28 2.5E-33 192.8 15.7 173 32-213 2-185 (257)
172 cd05578 STKc_Yank1 Catalytic d 100.0 5.3E-29 1.1E-33 194.7 13.7 181 27-214 2-187 (258)
173 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-29 1.2E-33 202.6 14.3 180 26-213 8-268 (343)
174 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.1E-28 4.5E-33 193.6 17.2 183 24-213 3-199 (284)
175 cd08223 STKc_Nek4 Catalytic do 100.0 3.6E-28 7.8E-33 189.7 18.1 180 27-213 2-189 (257)
176 cd07841 STKc_CDK7 Catalytic do 100.0 9.7E-29 2.1E-33 197.1 15.1 182 27-214 2-191 (298)
177 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-28 2.8E-33 193.3 15.5 181 27-213 2-199 (267)
178 cd05051 PTKc_DDR Catalytic dom 100.0 1.5E-28 3.3E-33 195.7 16.1 180 24-213 5-219 (296)
179 cd05052 PTKc_Abl Catalytic dom 100.0 2.2E-28 4.7E-33 191.9 16.6 176 27-213 8-192 (263)
180 cd05075 PTKc_Axl Catalytic dom 100.0 1E-28 2.2E-33 194.4 14.8 181 28-213 2-201 (272)
181 cd05035 PTKc_Axl_like Catalyti 100.0 2E-28 4.4E-33 192.6 16.4 181 27-213 1-202 (273)
182 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-28 6.3E-33 191.2 17.2 180 27-213 4-193 (267)
183 cd05062 PTKc_IGF-1R Catalytic 100.0 2E-28 4.3E-33 193.5 16.3 181 24-213 5-208 (277)
184 PTZ00284 protein kinase; Provi 100.0 2.4E-28 5.3E-33 206.5 17.9 179 25-213 129-332 (467)
185 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-28 4.8E-33 194.4 16.7 179 25-213 5-209 (288)
186 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-28 2.9E-33 196.3 15.4 179 26-213 6-218 (295)
187 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-28 4E-33 195.7 16.2 184 18-213 13-202 (297)
188 cd05090 PTKc_Ror1 Catalytic do 100.0 1.8E-28 3.9E-33 194.3 16.0 178 27-213 7-213 (283)
189 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-28 4.8E-33 193.7 16.4 179 26-213 6-195 (282)
190 KOG2345 Serine/threonine prote 100.0 3.2E-29 6.9E-34 186.8 10.7 188 22-214 18-229 (302)
191 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-28 5E-33 191.1 16.2 173 31-213 1-185 (257)
192 cd05111 PTK_HER3 Pseudokinase 100.0 2E-28 4.3E-33 193.8 15.8 177 28-213 10-198 (279)
193 cd05072 PTKc_Lyn Catalytic dom 100.0 3.2E-28 7E-33 190.6 16.7 179 23-213 4-191 (261)
194 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.7E-29 1.2E-33 197.2 12.6 180 27-213 3-188 (286)
195 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-28 3E-33 195.9 14.8 180 28-213 8-194 (293)
196 cd08217 STKc_Nek2 Catalytic do 100.0 3.6E-28 7.8E-33 190.1 17.0 180 28-213 3-197 (265)
197 cd05115 PTKc_Zap-70 Catalytic 100.0 2.8E-28 6E-33 190.8 16.3 172 32-213 2-185 (257)
198 cd06655 STKc_PAK2 Catalytic do 100.0 2.9E-28 6.4E-33 194.5 16.7 181 21-213 16-202 (296)
199 cd05068 PTKc_Frk_like Catalyti 100.0 2.8E-28 6E-33 191.0 16.3 178 25-213 6-191 (261)
200 cd05053 PTKc_FGFR Catalytic do 100.0 4.6E-28 1E-32 192.8 17.8 180 25-213 12-221 (293)
201 cd05063 PTKc_EphR_A2 Catalytic 100.0 3E-28 6.5E-33 191.4 16.4 180 26-213 6-197 (268)
202 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-28 3.6E-33 196.9 15.2 185 22-213 5-196 (309)
203 cd06654 STKc_PAK1 Catalytic do 100.0 3.3E-28 7E-33 194.3 16.8 186 17-214 13-204 (296)
204 cd08220 STKc_Nek8 Catalytic do 100.0 4.7E-28 1E-32 188.9 17.3 179 28-213 3-188 (256)
205 cd06607 STKc_TAO Catalytic dom 100.0 3.9E-28 8.4E-33 194.7 17.0 189 17-213 8-201 (307)
206 cd07832 STKc_CCRK Catalytic do 100.0 2.7E-28 5.8E-33 193.3 15.9 179 27-213 2-188 (286)
207 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-28 2.4E-33 194.9 13.6 174 32-213 2-208 (274)
208 cd06624 STKc_ASK Catalytic dom 100.0 5.4E-28 1.2E-32 190.1 17.5 176 30-213 13-198 (268)
209 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-28 5.3E-33 194.8 15.6 181 23-213 4-219 (296)
210 cd05089 PTKc_Tie1 Catalytic do 100.0 2.4E-28 5.2E-33 195.0 15.6 178 27-213 4-205 (297)
211 KOG0690 Serine/threonine prote 100.0 9.3E-30 2E-34 196.7 6.9 186 28-219 171-363 (516)
212 cd05574 STKc_phototropin_like 100.0 3E-28 6.4E-33 196.0 15.9 150 27-182 3-154 (316)
213 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.4E-28 7.5E-33 192.2 16.0 182 25-213 6-208 (277)
214 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.8E-28 8.2E-33 191.3 16.1 182 27-213 3-199 (272)
215 cd05032 PTKc_InsR_like Catalyt 100.0 4.2E-28 9.2E-33 191.4 16.4 179 26-213 7-208 (277)
216 cd06631 STKc_YSK4 Catalytic do 100.0 2.8E-28 6E-33 191.4 15.2 181 27-214 2-196 (265)
217 cd05609 STKc_MAST Catalytic do 100.0 5E-28 1.1E-32 193.9 17.0 180 27-213 3-203 (305)
218 cd05049 PTKc_Trk Catalytic dom 100.0 1.9E-28 4.1E-33 193.7 14.4 179 26-213 6-211 (280)
219 PHA03211 serine/threonine kina 100.0 1.5E-28 3.2E-33 206.3 14.5 170 27-213 171-349 (461)
220 PHA03209 serine/threonine kina 100.0 1.3E-28 2.7E-33 201.6 13.8 171 27-214 68-244 (357)
221 cd05633 STKc_GRK3 Catalytic do 100.0 4.1E-28 8.8E-33 192.2 16.0 177 32-214 1-184 (279)
222 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-28 5.5E-33 194.1 14.9 180 24-213 5-191 (291)
223 KOG0666 Cyclin C-dependent kin 100.0 7.3E-30 1.6E-34 196.0 5.6 184 27-216 26-231 (438)
224 cd05061 PTKc_InsR Catalytic do 100.0 4.1E-28 8.9E-33 192.8 16.0 179 26-213 7-208 (288)
225 cd05094 PTKc_TrkC Catalytic do 100.0 6E-28 1.3E-32 192.2 16.9 177 27-213 7-212 (291)
226 KOG0610 Putative serine/threon 100.0 1.2E-28 2.5E-33 195.2 12.5 153 23-181 75-229 (459)
227 PHA03207 serine/threonine kina 100.0 3.5E-28 7.6E-33 201.3 16.0 172 26-213 93-274 (392)
228 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-28 4.3E-33 191.3 13.7 173 31-213 1-193 (259)
229 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-28 2.8E-33 193.3 12.7 180 27-213 4-193 (267)
230 cd05039 PTKc_Csk_like Catalyti 100.0 4.9E-28 1.1E-32 189.0 15.9 177 24-213 5-186 (256)
231 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.3E-28 1.1E-32 194.5 16.5 180 24-213 12-223 (314)
232 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.3E-28 1.1E-32 188.9 16.0 176 27-213 6-188 (256)
233 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.3E-28 1.2E-32 189.1 16.0 175 28-213 7-188 (256)
234 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.7E-28 1.2E-32 196.0 16.7 185 20-213 7-223 (334)
235 cd06632 STKc_MEKK1_plant Catal 100.0 5.3E-28 1.1E-32 188.7 15.8 181 28-213 3-189 (258)
236 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-28 1E-32 193.9 15.7 184 21-213 11-226 (304)
237 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.2E-29 1.6E-33 194.1 10.7 175 31-213 1-192 (258)
238 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-28 7.4E-33 190.0 14.5 176 27-213 6-188 (256)
239 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.4E-28 5.2E-33 193.8 13.8 179 27-213 3-194 (286)
240 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-28 7.1E-33 191.5 14.4 184 21-213 3-203 (272)
241 cd05057 PTKc_EGFR_like Catalyt 100.0 8.8E-28 1.9E-32 190.0 16.9 178 26-213 8-198 (279)
242 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.1E-28 6.7E-33 193.1 14.3 180 25-213 5-189 (284)
243 cd05046 PTK_CCK4 Pseudokinase 100.0 6.6E-28 1.4E-32 190.2 16.0 177 28-213 8-205 (275)
244 cd05055 PTKc_PDGFR Catalytic d 100.0 8.4E-28 1.8E-32 192.4 16.7 183 22-213 32-230 (302)
245 cd07831 STKc_MOK Catalytic dom 100.0 4.2E-28 9.2E-33 191.7 14.8 180 27-214 1-187 (282)
246 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.8E-28 1E-32 190.0 15.0 175 31-213 1-196 (262)
247 cd08218 STKc_Nek1 Catalytic do 100.0 1.6E-27 3.6E-32 186.0 17.8 179 27-213 2-188 (256)
248 cd06626 STKc_MEKK4 Catalytic d 100.0 1E-27 2.2E-32 187.8 16.7 179 27-213 2-193 (264)
249 cd05082 PTKc_Csk Catalytic dom 100.0 7.5E-28 1.6E-32 188.0 15.9 175 26-213 7-186 (256)
250 cd05047 PTKc_Tie Catalytic dom 100.0 6.1E-28 1.3E-32 190.1 15.5 174 31-213 1-198 (270)
251 cd05606 STKc_beta_ARK Catalyti 100.0 8.6E-28 1.9E-32 190.1 16.4 176 32-213 1-183 (278)
252 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.3E-28 9.2E-33 196.9 14.9 184 24-214 5-197 (337)
253 cd07833 STKc_CDKL Catalytic do 100.0 3.9E-28 8.4E-33 192.5 14.3 180 27-213 3-189 (288)
254 cd07842 STKc_CDK8_like Catalyt 100.0 3.6E-28 7.9E-33 195.2 14.3 183 27-213 2-203 (316)
255 cd00192 PTKc Catalytic domain 100.0 7E-28 1.5E-32 188.0 15.5 174 31-213 1-194 (262)
256 cd06638 STKc_myosinIIIA Cataly 100.0 1.6E-27 3.4E-32 189.1 17.7 184 21-213 15-216 (286)
257 cd05613 STKc_MSK1_N N-terminal 100.0 7.4E-28 1.6E-32 191.4 15.8 182 27-213 2-195 (290)
258 cd05043 PTK_Ryk Pseudokinase d 100.0 8.8E-28 1.9E-32 190.0 16.2 183 23-213 4-206 (280)
259 cd05042 PTKc_Aatyk Catalytic d 100.0 4.6E-28 9.9E-33 190.6 14.4 175 31-213 1-196 (269)
260 cd07865 STKc_CDK9 Catalytic do 100.0 8.3E-28 1.8E-32 192.5 16.1 188 19-213 7-211 (310)
261 cd06639 STKc_myosinIIIB Cataly 100.0 2.1E-27 4.6E-32 188.9 18.2 185 20-213 18-220 (291)
262 KOG0612 Rho-associated, coiled 100.0 9.6E-30 2.1E-34 221.4 5.0 182 28-215 78-270 (1317)
263 cd05572 STKc_cGK_PKG Catalytic 100.0 8.5E-28 1.8E-32 188.3 15.7 174 33-213 1-179 (262)
264 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.8E-28 2.1E-32 192.4 16.3 180 24-213 18-229 (307)
265 PTZ00024 cyclin-dependent prot 100.0 4.1E-28 8.8E-33 196.8 14.3 188 20-213 4-221 (335)
266 KOG0033 Ca2+/calmodulin-depend 100.0 1.4E-30 3E-35 194.1 -0.2 184 23-213 10-199 (355)
267 cd05577 STKc_GRK Catalytic dom 100.0 6.2E-28 1.3E-32 190.7 14.9 174 33-213 1-181 (277)
268 cd06917 STKc_NAK1_like Catalyt 100.0 5.4E-28 1.2E-32 190.9 14.5 178 27-213 3-189 (277)
269 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.6E-27 3.5E-32 189.3 17.3 179 28-213 4-190 (287)
270 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.4E-28 5.2E-33 191.2 12.3 176 27-213 8-191 (261)
271 cd05071 PTKc_Src Catalytic dom 100.0 6E-28 1.3E-32 189.4 14.6 176 24-213 6-190 (262)
272 cd06623 PKc_MAPKK_plant_like C 100.0 1.5E-27 3.3E-32 186.7 16.8 178 27-213 3-187 (264)
273 cd07849 STKc_ERK1_2_like Catal 100.0 5.8E-28 1.3E-32 196.1 14.8 183 23-214 4-198 (336)
274 cd05056 PTKc_FAK Catalytic dom 100.0 1.7E-27 3.7E-32 187.4 16.9 179 25-213 6-195 (270)
275 cd05045 PTKc_RET Catalytic dom 100.0 6.3E-28 1.4E-32 191.9 14.3 179 27-213 2-216 (290)
276 PLN00009 cyclin-dependent kina 100.0 1.5E-27 3.2E-32 190.1 16.5 180 27-213 4-191 (294)
277 cd06609 STKc_MST3_like Catalyt 100.0 7.2E-28 1.6E-32 189.9 14.5 176 28-213 4-185 (274)
278 cd05610 STKc_MASTL Catalytic d 100.0 3.7E-27 8.1E-32 206.4 20.4 181 27-213 6-192 (669)
279 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.9E-28 1.9E-32 198.9 15.6 179 26-213 38-328 (401)
280 cd06640 STKc_MST4 Catalytic do 100.0 9.1E-28 2E-32 189.8 14.9 177 28-213 7-188 (277)
281 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-27 3.3E-32 187.7 16.0 175 31-213 1-196 (269)
282 cd06635 STKc_TAO1 Catalytic do 100.0 1.9E-27 4.2E-32 191.5 16.9 188 18-213 19-211 (317)
283 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-27 3E-32 185.8 15.5 173 31-213 1-181 (250)
284 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.8E-28 1E-32 197.1 13.4 185 21-214 2-207 (342)
285 cd07855 STKc_ERK5 Catalytic do 100.0 4.6E-28 9.9E-33 196.5 13.1 182 26-213 6-199 (334)
286 cd07860 STKc_CDK2_3 Catalytic 100.0 6E-28 1.3E-32 191.2 13.5 180 27-214 2-189 (284)
287 smart00219 TyrKc Tyrosine kina 100.0 1.6E-27 3.5E-32 185.8 15.6 177 28-213 2-191 (258)
288 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-27 2.7E-32 188.3 15.1 185 27-216 1-207 (273)
289 cd07850 STKc_JNK Catalytic dom 100.0 2.1E-27 4.5E-32 194.1 16.8 182 23-214 15-205 (353)
290 cd07852 STKc_MAPK15 Catalytic 100.0 7E-28 1.5E-32 195.6 13.8 182 24-213 7-200 (337)
291 cd05092 PTKc_TrkA Catalytic do 100.0 1.7E-27 3.7E-32 188.5 15.7 179 26-213 6-211 (280)
292 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-27 2.9E-32 187.0 14.8 177 31-214 2-181 (260)
293 cd07864 STKc_CDK12 Catalytic d 100.0 9.6E-28 2.1E-32 191.7 14.3 181 27-213 9-205 (302)
294 cd06608 STKc_myosinIII_like Ca 100.0 2.9E-27 6.3E-32 186.0 16.9 183 22-213 4-205 (275)
295 cd06647 STKc_PAK_I Catalytic d 100.0 1.7E-27 3.8E-32 189.8 15.7 184 18-213 13-202 (293)
296 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.6E-27 5.5E-32 185.7 16.4 179 27-213 3-194 (267)
297 cd05091 PTKc_Ror2 Catalytic do 100.0 7.1E-28 1.5E-32 190.8 13.3 178 27-213 7-213 (283)
298 KOG4721 Serine/threonine prote 100.0 1.2E-28 2.6E-33 202.2 9.0 167 31-216 130-303 (904)
299 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-27 3E-32 189.1 14.8 178 27-213 2-188 (284)
300 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-27 3.4E-32 186.6 14.9 178 24-213 5-191 (261)
301 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-27 2.6E-32 191.6 14.5 178 26-213 8-198 (303)
302 cd07840 STKc_CDK9_like Catalyt 100.0 2E-27 4.3E-32 188.2 15.5 180 28-213 2-189 (287)
303 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.2E-28 9.1E-33 191.6 11.6 176 28-213 7-188 (277)
304 cd07837 STKc_CdkB_plant Cataly 100.0 1.9E-27 4.1E-32 189.4 15.3 183 27-214 3-200 (295)
305 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.5E-27 5.5E-32 187.6 15.9 184 21-213 13-213 (282)
306 cd05083 PTKc_Chk Catalytic dom 100.0 2.3E-27 4.9E-32 185.1 15.2 173 27-213 8-184 (254)
307 cd05050 PTKc_Musk Catalytic do 100.0 1.9E-27 4.1E-32 188.9 14.9 178 27-213 7-219 (288)
308 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-27 4E-32 186.3 14.6 175 31-213 1-189 (262)
309 KOG0587 Traf2- and Nck-interac 100.0 5.3E-27 1.1E-31 200.1 18.3 189 21-218 16-220 (953)
310 cd06641 STKc_MST3 Catalytic do 100.0 3.3E-27 7.1E-32 186.6 15.8 177 27-213 6-188 (277)
311 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.1E-27 1.3E-31 185.3 17.3 178 27-213 3-194 (283)
312 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.7E-27 5.8E-32 192.7 15.5 187 20-214 11-204 (343)
313 cd05041 PTKc_Fes_like Catalyti 100.0 4.1E-27 8.9E-32 183.2 15.9 174 31-213 1-182 (251)
314 cd05073 PTKc_Hck Catalytic dom 100.0 7.3E-27 1.6E-31 182.9 17.4 178 24-213 5-190 (260)
315 cd08215 STKc_Nek Catalytic dom 100.0 7.8E-27 1.7E-31 181.7 17.5 179 27-213 2-190 (258)
316 cd06612 STKc_MST1_2 Catalytic 100.0 3.9E-27 8.4E-32 183.7 15.7 178 24-214 3-187 (256)
317 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-27 3.1E-32 189.0 13.4 178 28-213 2-187 (283)
318 cd07866 STKc_BUR1 Catalytic do 100.0 1.4E-27 3E-32 191.3 13.5 185 23-214 7-215 (311)
319 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.8E-27 6.1E-32 186.2 14.9 175 31-213 1-195 (268)
320 cd05040 PTKc_Ack_like Catalyti 100.0 1.9E-27 4.2E-32 185.7 13.9 173 31-213 1-187 (257)
321 cd06606 STKc_MAPKKK Catalytic 100.0 7.4E-27 1.6E-31 181.8 17.1 181 27-213 2-190 (260)
322 cd06605 PKc_MAPKK Catalytic do 100.0 8.8E-28 1.9E-32 188.3 11.8 177 28-213 4-186 (265)
323 cd06648 STKc_PAK_II Catalytic 100.0 5.2E-27 1.1E-31 186.3 16.3 172 31-213 25-202 (285)
324 cd06627 STKc_Cdc7_like Catalyt 100.0 7.7E-27 1.7E-31 181.6 16.8 178 28-213 3-186 (254)
325 KOG1151 Tousled-like protein k 100.0 3.3E-28 7.1E-33 194.9 9.1 194 24-219 463-677 (775)
326 cd06659 STKc_PAK6 Catalytic do 100.0 8.1E-28 1.7E-32 192.1 11.4 175 28-213 24-204 (297)
327 cd06658 STKc_PAK5 Catalytic do 100.0 8.6E-28 1.9E-32 191.5 11.5 184 18-213 16-205 (292)
328 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.3E-27 9.4E-32 184.1 15.3 177 24-213 5-190 (260)
329 cd07877 STKc_p38alpha_MAPK14 C 100.0 5E-27 1.1E-31 191.3 16.2 184 22-213 15-205 (345)
330 KOG0604 MAP kinase-activated p 100.0 3.3E-28 7.1E-33 185.9 8.5 181 22-213 59-250 (400)
331 cd05579 STKc_MAST_like Catalyt 100.0 1.5E-27 3.3E-32 186.5 12.6 174 33-213 1-188 (265)
332 KOG4645 MAPKKK (MAP kinase kin 99.9 1.2E-28 2.7E-33 217.0 6.6 183 24-213 1234-1428(1509)
333 KOG1025 Epidermal growth facto 99.9 1.8E-28 4E-33 207.9 7.3 182 27-217 698-893 (1177)
334 cd07857 STKc_MPK1 Catalytic do 99.9 5.5E-27 1.2E-31 190.0 15.7 182 27-214 2-198 (332)
335 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 5E-27 1.1E-31 183.8 14.9 174 27-213 8-190 (260)
336 KOG0984 Mitogen-activated prot 99.9 1.9E-27 4.1E-32 173.3 11.4 178 30-215 51-241 (282)
337 KOG1035 eIF-2alpha kinase GCN2 99.9 5.1E-28 1.1E-32 212.1 10.1 179 31-215 485-807 (1351)
338 cd05581 STKc_PDK1 Catalytic do 99.9 2E-27 4.4E-32 187.5 12.5 152 27-184 3-155 (280)
339 KOG4257 Focal adhesion tyrosin 99.9 7.1E-28 1.5E-32 199.4 10.1 179 30-217 394-585 (974)
340 KOG1152 Signal transduction se 99.9 1.1E-27 2.4E-32 196.5 11.1 181 29-215 565-758 (772)
341 KOG0614 cGMP-dependent protein 99.9 1.5E-29 3.2E-34 205.0 0.1 182 28-215 423-608 (732)
342 PHA03390 pk1 serine/threonine- 99.9 9.2E-27 2E-31 183.3 15.8 168 33-214 24-194 (267)
343 cd05069 PTKc_Yes Catalytic dom 99.9 9.5E-27 2.1E-31 182.3 15.8 176 27-214 8-191 (260)
344 cd08225 STKc_Nek5 Catalytic do 99.9 4.3E-27 9.3E-32 183.5 13.8 180 27-213 2-189 (257)
345 KOG0607 MAP kinase-interacting 99.9 3E-28 6.6E-33 187.7 6.6 175 31-214 84-279 (463)
346 cd06614 STKc_PAK Catalytic dom 99.9 1.3E-26 2.8E-31 184.0 16.2 183 19-213 14-203 (286)
347 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.4E-26 3.1E-31 187.4 16.6 183 22-213 8-193 (328)
348 cd07834 STKc_MAPK Catalytic do 99.9 3.6E-27 7.7E-32 190.8 13.0 181 27-213 2-194 (330)
349 KOG2052 Activin A type IB rece 99.9 1.6E-27 3.4E-32 190.4 10.5 191 18-219 204-421 (513)
350 PHA02882 putative serine/threo 99.9 1.5E-26 3.2E-31 184.6 16.0 191 19-214 6-221 (294)
351 cd08226 PK_STRAD_beta Pseudoki 99.9 6.7E-27 1.4E-31 189.2 14.2 176 31-213 4-197 (328)
352 cd05044 PTKc_c-ros Catalytic d 99.9 4.6E-27 9.9E-32 184.7 12.8 176 31-213 1-200 (269)
353 PHA03210 serine/threonine kina 99.9 4.2E-27 9E-32 200.2 13.0 181 26-213 149-355 (501)
354 cd05112 PTKc_Itk Catalytic dom 99.9 1.9E-26 4.1E-31 180.0 15.7 175 27-213 6-188 (256)
355 cd08530 STKc_CNK2-like Catalyt 99.9 1.1E-26 2.3E-31 181.1 14.3 179 27-213 2-188 (256)
356 cd06633 STKc_TAO3 Catalytic do 99.9 3.4E-26 7.3E-31 184.0 17.1 187 19-213 16-207 (313)
357 cd06634 STKc_TAO2 Catalytic do 99.9 1.2E-26 2.6E-31 186.2 14.4 189 17-213 8-201 (308)
358 cd05583 STKc_MSK_N N-terminal 99.9 1.1E-26 2.3E-31 184.6 13.8 182 27-213 2-195 (288)
359 KOG4278 Protein tyrosine kinas 99.9 8.2E-28 1.8E-32 199.3 7.5 178 30-218 272-460 (1157)
360 KOG0664 Nemo-like MAPK-related 99.9 5.6E-29 1.2E-33 188.4 0.4 180 31-216 59-249 (449)
361 cd05122 PKc_STE Catalytic doma 99.9 5.3E-26 1.2E-30 176.3 17.0 177 28-213 3-184 (253)
362 KOG0199 ACK and related non-re 99.9 1.7E-27 3.7E-32 199.2 8.9 181 28-218 113-309 (1039)
363 cd07830 STKc_MAK_like Catalyti 99.9 1.4E-26 3E-31 183.3 13.6 178 27-213 1-186 (283)
364 cd07838 STKc_CDK4_6_like Catal 99.9 7.2E-26 1.6E-30 179.3 17.4 180 27-213 1-193 (287)
365 KOG0986 G protein-coupled rece 99.9 1.6E-27 3.6E-32 190.8 7.8 186 22-213 182-373 (591)
366 cd06657 STKc_PAK4 Catalytic do 99.9 2.3E-26 5.1E-31 183.3 14.4 172 31-213 26-203 (292)
367 cd05123 STKc_AGC Catalytic dom 99.9 2.4E-26 5.2E-31 178.6 14.0 174 33-213 1-180 (250)
368 cd07879 STKc_p38delta_MAPK13 C 99.9 3.8E-26 8.3E-31 185.9 15.3 183 23-214 14-203 (342)
369 cd08528 STKc_Nek10 Catalytic d 99.9 5E-26 1.1E-30 178.9 15.2 182 27-213 2-200 (269)
370 cd07829 STKc_CDK_like Catalyti 99.9 1.4E-26 3.1E-31 182.9 12.1 179 28-214 2-187 (282)
371 cd05118 STKc_CMGC Catalytic do 99.9 2.3E-26 4.9E-31 181.9 12.6 179 28-214 2-187 (283)
372 cd08216 PK_STRAD Pseudokinase 99.9 6.8E-26 1.5E-30 182.1 15.0 170 37-213 12-197 (314)
373 cd06616 PKc_MKK4 Catalytic dom 99.9 4.2E-26 9E-31 181.1 13.6 177 28-213 7-197 (288)
374 KOG0596 Dual specificity; seri 99.9 2.8E-26 6E-31 187.5 11.9 182 22-213 358-559 (677)
375 cd07851 STKc_p38 Catalytic dom 99.9 3.1E-26 6.7E-31 186.5 12.2 185 22-214 13-204 (343)
376 cd05576 STKc_RPK118_like Catal 99.9 6.5E-26 1.4E-30 175.4 13.1 164 36-214 4-170 (237)
377 cd06618 PKc_MKK7 Catalytic dom 99.9 1.7E-25 3.6E-30 178.5 14.6 178 27-213 17-205 (296)
378 KOG0668 Casein kinase II, alph 99.9 7.4E-27 1.6E-31 172.8 5.3 182 17-213 31-220 (338)
379 KOG0669 Cyclin T-dependent kin 99.9 1.2E-28 2.6E-33 184.5 -4.3 188 19-213 12-216 (376)
380 cd08222 STKc_Nek11 Catalytic d 99.9 8.5E-26 1.8E-30 176.8 11.1 180 27-213 2-192 (260)
381 KOG1006 Mitogen-activated prot 99.9 6.4E-27 1.4E-31 176.3 3.7 177 31-215 70-258 (361)
382 PRK09188 serine/threonine prot 99.9 3.2E-24 6.8E-29 173.9 17.8 158 12-184 5-165 (365)
383 KOG0983 Mitogen-activated prot 99.9 3.4E-25 7.3E-30 167.8 10.8 177 31-215 98-283 (391)
384 KOG0576 Mitogen-activated prot 99.9 5.2E-27 1.1E-31 195.3 0.9 189 19-217 10-206 (829)
385 KOG0671 LAMMER dual specificit 99.9 9.7E-25 2.1E-29 171.5 13.1 185 18-213 82-296 (415)
386 PLN03225 Serine/threonine-prot 99.9 6.1E-25 1.3E-29 188.6 12.7 149 25-183 132-308 (566)
387 KOG1345 Serine/threonine kinas 99.9 9.1E-26 2E-30 170.6 6.4 192 18-219 18-218 (378)
388 KOG3653 Transforming growth fa 99.9 2.8E-25 6.1E-30 178.7 9.3 179 28-217 213-417 (534)
389 KOG0200 Fibroblast/platelet-de 99.9 1.7E-24 3.7E-29 187.5 14.2 183 22-213 293-508 (609)
390 KOG0696 Serine/threonine prote 99.9 9E-26 1.9E-30 179.5 5.6 182 28-215 352-539 (683)
391 smart00221 STYKc Protein kinas 99.9 7.4E-24 1.6E-28 161.7 15.1 178 28-213 2-187 (225)
392 PLN00113 leucine-rich repeat r 99.9 4.5E-24 9.7E-29 194.7 14.6 170 28-213 693-865 (968)
393 KOG0603 Ribosomal protein S6 k 99.9 1.1E-24 2.3E-29 181.0 9.5 174 27-214 324-501 (612)
394 KOG0695 Serine/threonine prote 99.9 7.4E-25 1.6E-29 170.4 7.0 184 26-215 251-440 (593)
395 KOG0608 Warts/lats-like serine 99.9 5.2E-24 1.1E-28 177.0 11.5 148 28-181 632-779 (1034)
396 cd05147 RIO1_euk RIO kinase fa 99.9 3.4E-23 7.3E-28 154.8 14.0 146 30-184 2-170 (190)
397 PLN03224 probable serine/threo 99.9 4E-23 8.6E-28 174.1 15.4 155 26-183 146-361 (507)
398 PRK10359 lipopolysaccharide co 99.9 5E-23 1.1E-27 156.3 13.4 170 23-215 30-211 (232)
399 cd00180 PKc Catalytic domain o 99.9 2E-22 4.3E-27 151.5 16.3 175 33-214 1-182 (215)
400 cd05145 RIO1_like RIO kinase f 99.9 1.8E-22 4E-27 151.1 15.4 146 30-184 2-170 (190)
401 smart00220 S_TKc Serine/Threon 99.9 4.7E-23 1E-27 158.6 11.6 168 37-213 1-173 (244)
402 KOG1163 Casein kinase (serine/ 99.9 1.6E-22 3.5E-27 150.8 12.9 154 22-187 13-170 (341)
403 KOG1165 Casein kinase (serine/ 99.9 2.3E-21 5E-26 150.6 14.1 181 22-213 25-223 (449)
404 KOG0670 U4/U6-associated splic 99.9 7.8E-22 1.7E-26 160.8 12.0 176 27-213 434-622 (752)
405 KOG0665 Jun-N-terminal kinase 99.9 1.3E-22 2.7E-27 156.5 6.7 183 20-213 13-204 (369)
406 PRK10345 hypothetical protein; 99.9 2.4E-20 5.1E-25 141.0 15.6 138 31-180 8-159 (210)
407 KOG1164 Casein kinase (serine/ 99.9 1.3E-20 2.7E-25 152.3 13.7 180 26-213 19-224 (322)
408 KOG1027 Serine/threonine prote 99.8 8.7E-21 1.9E-25 161.8 12.0 173 26-213 510-701 (903)
409 smart00090 RIO RIO-like kinase 99.8 9.4E-20 2E-24 140.6 13.5 154 23-185 26-202 (237)
410 KOG1290 Serine/threonine prote 99.8 3.7E-19 8.1E-24 144.2 15.1 141 16-164 68-222 (590)
411 KOG1024 Receptor-like protein 99.8 2.2E-20 4.7E-25 148.0 5.2 184 27-217 286-491 (563)
412 PRK14879 serine/threonine prot 99.8 3.7E-18 8E-23 129.8 14.8 141 31-183 2-146 (211)
413 PRK12274 serine/threonine prot 99.8 7.1E-18 1.5E-22 126.0 14.1 136 29-182 6-143 (218)
414 TIGR03724 arch_bud32 Kae1-asso 99.8 7.5E-18 1.6E-22 127.0 14.1 137 32-183 1-141 (199)
415 PRK09605 bifunctional UGMP fam 99.8 1.3E-17 2.9E-22 143.2 15.4 141 28-184 336-480 (535)
416 KOG1167 Serine/threonine prote 99.8 7E-19 1.5E-23 140.2 6.9 146 22-180 33-182 (418)
417 COG0515 SPS1 Serine/threonine 99.8 3.5E-17 7.6E-22 130.5 16.2 179 27-213 2-198 (384)
418 KOG1166 Mitotic checkpoint ser 99.8 3E-18 6.6E-23 151.3 10.6 183 19-213 692-890 (974)
419 cd05144 RIO2_C RIO kinase fami 99.8 1.2E-17 2.7E-22 125.8 12.4 144 25-184 15-178 (198)
420 cd05119 RIO RIO kinase family, 99.7 9.8E-17 2.1E-21 119.6 12.1 141 30-184 2-167 (187)
421 PF14531 Kinase-like: Kinase-l 99.7 1.1E-16 2.4E-21 125.3 5.9 193 22-219 9-245 (288)
422 PRK01723 3-deoxy-D-manno-octul 99.7 4.7E-15 1E-19 114.7 14.9 143 31-183 37-194 (239)
423 KOG0590 Checkpoint kinase and 99.7 1.2E-16 2.6E-21 137.7 6.1 187 22-214 315-513 (601)
424 PLN00181 protein SPA1-RELATED; 99.6 7.8E-17 1.7E-21 144.4 3.9 108 102-213 54-202 (793)
425 cd05120 APH_ChoK_like Aminogly 99.6 6.4E-15 1.4E-19 105.4 12.9 136 30-183 3-141 (155)
426 KOG0603 Ribosomal protein S6 k 99.6 3.5E-16 7.6E-21 130.7 0.6 175 33-217 2-182 (612)
427 KOG0195 Integrin-linked kinase 99.6 3.1E-16 6.7E-21 119.5 -0.3 182 28-217 193-382 (448)
428 KOG1240 Protein kinase contain 99.5 7E-15 1.5E-19 129.6 3.7 180 24-213 23-225 (1431)
429 cd05146 RIO3_euk RIO kinase fa 99.5 2.5E-12 5.3E-17 95.9 13.9 145 30-185 2-178 (197)
430 TIGR01982 UbiB 2-polyprenylphe 99.5 6.9E-13 1.5E-17 111.1 12.2 147 31-185 123-311 (437)
431 smart00750 KIND kinase non-cat 99.4 3.2E-13 6.9E-18 99.5 6.4 90 113-214 1-92 (176)
432 cd05151 ChoK Choline Kinase (C 99.4 3.5E-12 7.5E-17 93.5 10.2 131 31-182 4-138 (170)
433 PRK04750 ubiB putative ubiquin 99.4 1.3E-12 2.8E-17 111.1 7.6 145 31-185 125-318 (537)
434 KOG0590 Checkpoint kinase and 99.3 9.6E-13 2.1E-17 113.8 1.3 188 23-217 19-221 (601)
435 KOG3087 Serine/threonine prote 99.3 2.4E-10 5.1E-15 83.1 13.2 150 31-186 13-171 (229)
436 COG3642 Mn2+-dependent serine/ 99.2 3.8E-10 8.2E-15 82.2 12.2 138 31-185 2-145 (204)
437 KOG4158 BRPK/PTEN-induced prot 99.2 7.7E-11 1.7E-15 94.7 7.9 126 84-213 274-444 (598)
438 cd05154 ACAD10_11_like Acyl-Co 99.1 7E-10 1.5E-14 84.6 11.6 147 31-182 4-208 (223)
439 PF01163 RIO1: RIO1 family; I 99.1 1.7E-09 3.6E-14 80.4 12.8 132 41-185 2-160 (188)
440 KOG1243 Protein kinase [Genera 99.1 3.7E-10 8E-15 96.0 9.5 128 43-184 30-158 (690)
441 KOG1023 Natriuretic peptide re 99.1 9.3E-11 2E-15 97.9 5.7 130 81-215 2-147 (484)
442 KOG1266 Protein kinase [Signal 99.1 7E-12 1.5E-16 98.2 -0.9 160 13-174 51-221 (458)
443 KOG0601 Cyclin-dependent kinas 99.0 9.2E-10 2E-14 92.3 6.9 184 23-213 264-453 (524)
444 KOG0606 Microtubule-associated 99.0 2.7E-10 5.8E-15 100.9 3.4 141 28-214 86-246 (1205)
445 PRK15123 lipopolysaccharide co 99.0 4.7E-08 1E-12 76.8 14.7 140 37-180 34-194 (268)
446 KOG0601 Cyclin-dependent kinas 98.9 7.7E-10 1.7E-14 92.8 2.5 183 24-213 113-314 (524)
447 KOG1033 eIF-2alpha kinase PEK/ 98.8 9.1E-10 2E-14 91.1 0.2 108 101-214 329-450 (516)
448 PF06293 Kdo: Lipopolysacchari 98.7 8.9E-08 1.9E-12 72.6 9.5 111 71-183 56-173 (206)
449 KOG3741 Poly(A) ribonuclease s 98.7 1.4E-07 3.1E-12 78.6 11.2 142 37-185 288-447 (655)
450 PRK09902 hypothetical protein; 98.7 1.3E-06 2.7E-11 65.8 13.4 145 34-183 27-182 (216)
451 COG0478 RIO-like serine/threon 98.6 6.7E-07 1.4E-11 69.2 9.7 147 24-185 90-256 (304)
452 PF01636 APH: Phosphotransfera 98.5 7.8E-06 1.7E-10 62.5 13.8 145 31-183 3-200 (239)
453 COG0661 AarF Predicted unusual 98.5 2.4E-06 5.2E-11 72.8 11.3 151 26-185 125-319 (517)
454 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 4.9E-06 1.1E-10 64.0 12.0 137 31-181 7-183 (226)
455 COG1718 RIO1 Serine/threonine 98.4 1.5E-05 3.3E-10 61.1 13.8 151 23-185 46-220 (268)
456 KOG1235 Predicted unusual prot 98.4 5.8E-06 1.3E-10 70.5 11.1 145 31-185 167-359 (538)
457 PF06176 WaaY: Lipopolysacchar 98.3 8.7E-06 1.9E-10 61.6 10.3 138 28-180 34-183 (229)
458 COG2112 Predicted Ser/Thr prot 98.2 1.7E-05 3.6E-10 57.9 9.4 136 26-184 23-159 (201)
459 PLN02876 acyl-CoA dehydrogenas 98.1 0.00016 3.4E-09 65.9 14.8 81 31-114 44-130 (822)
460 KOG2270 Serine/threonine prote 98.0 0.00022 4.7E-09 58.1 12.7 154 22-185 141-318 (520)
461 cd05150 APH Aminoglycoside 3'- 97.9 0.00029 6.2E-09 54.7 11.1 74 32-116 5-80 (244)
462 PRK09550 mtnK methylthioribose 97.9 0.0016 3.4E-08 54.2 15.8 79 31-113 32-116 (401)
463 cd05155 APH_ChoK_like_1 Unchar 97.8 0.0003 6.5E-09 54.3 10.7 32 150-182 165-196 (235)
464 PF12260 PIP49_C: Protein-kina 97.8 0.00018 4E-09 53.6 8.7 102 75-183 8-114 (188)
465 PF13095 FTA2: Kinetochore Sim 97.8 0.0029 6.4E-08 47.5 14.9 133 23-178 35-206 (207)
466 PRK10593 hypothetical protein; 97.7 0.0017 3.7E-08 52.0 13.7 77 31-115 20-100 (297)
467 KOG0576 Mitogen-activated prot 97.7 1E-05 2.2E-10 69.4 0.8 170 24-213 241-417 (829)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0048 1E-07 46.4 13.7 138 31-180 7-172 (199)
469 cd05157 ETNK_euk Ethanolamine 97.6 0.0032 6.9E-08 48.5 13.0 74 31-115 4-79 (235)
470 TIGR01767 MTRK 5-methylthiorib 97.5 0.003 6.5E-08 51.7 11.8 78 31-112 1-84 (370)
471 TIGR02721 ycfN_thiK thiamine k 97.5 0.0011 2.4E-08 51.8 9.2 139 33-185 4-180 (256)
472 cd05152 MPH2' Macrolide 2'-Pho 97.1 0.015 3.2E-07 46.2 12.0 33 150-183 186-219 (276)
473 PRK12396 5-methylribose kinase 97.1 0.011 2.3E-07 49.2 11.0 78 31-112 35-117 (409)
474 PLN02756 S-methyl-5-thioribose 97.0 0.026 5.7E-07 47.1 13.0 76 31-112 38-119 (418)
475 cd05153 HomoserineK_II Homoser 97.0 0.0035 7.7E-08 50.0 7.8 141 31-181 20-206 (296)
476 cd05156 ChoK_euk Choline Kinas 97.0 0.033 7.1E-07 44.6 12.9 36 150-185 180-218 (302)
477 COG3173 Predicted aminoglycosi 96.8 0.032 7E-07 45.0 11.4 33 150-183 199-231 (321)
478 PLN02236 choline kinase 96.8 0.023 4.9E-07 46.6 10.8 147 26-184 38-235 (344)
479 KOG2137 Protein kinase [Signal 96.8 0.0014 3E-08 57.1 3.7 45 137-183 108-152 (700)
480 COG4248 Uncharacterized protei 96.8 0.014 3E-07 48.6 9.2 181 21-213 7-208 (637)
481 KOG0606 Microtubule-associated 96.7 0.00019 4E-09 65.0 -2.0 146 28-179 807-952 (1205)
482 TIGR00938 thrB_alt homoserine 96.4 0.053 1.2E-06 43.6 10.4 31 150-181 188-218 (307)
483 PLN02421 phosphotransferase, a 96.3 0.11 2.4E-06 42.3 12.0 36 150-185 183-218 (330)
484 PRK05231 homoserine kinase; Pr 96.3 0.25 5.5E-06 39.8 13.8 31 150-181 188-218 (319)
485 KOG1290 Serine/threonine prote 95.9 0.0019 4.2E-08 54.0 -0.3 44 169-213 392-438 (590)
486 PF03881 Fructosamin_kin: Fruc 95.7 0.36 7.7E-06 38.6 11.8 72 31-113 23-97 (288)
487 COG3001 Uncharacterized protei 95.4 0.3 6.6E-06 37.7 9.9 69 39-116 27-99 (286)
488 COG5072 ALK1 Serine/threonine 95.4 0.095 2.1E-06 43.1 7.5 78 98-183 296-373 (488)
489 PTZ00384 choline kinase; Provi 95.2 0.26 5.6E-06 41.1 9.9 33 151-185 229-261 (383)
490 KOG2268 Serine/threonine prote 95.0 0.029 6.4E-07 45.4 3.7 144 26-185 93-256 (465)
491 KOG1035 eIF-2alpha kinase GCN2 94.7 0.058 1.3E-06 50.2 5.1 141 71-214 227-380 (1351)
492 PF03109 ABC1: ABC1 family; I 94.6 0.023 5E-07 39.0 1.9 45 31-83 17-61 (119)
493 KOG1236 Predicted unusual prot 94.2 0.3 6.6E-06 40.9 7.8 61 104-167 321-382 (565)
494 PF07387 Seadorna_VP7: Seadorn 94.1 0.058 1.3E-06 41.3 3.3 86 71-176 103-188 (308)
495 PTZ00296 choline kinase; Provi 92.6 2.2 4.9E-05 36.3 10.8 33 150-184 285-317 (442)
496 PF04655 APH_6_hur: Aminoglyco 92.3 0.81 1.8E-05 35.8 7.3 73 32-118 9-85 (253)
497 PF01633 Choline_kinase: Choli 92.2 0.11 2.4E-06 39.3 2.4 36 150-185 144-179 (211)
498 TIGR02906 spore_CotS spore coa 92.2 0.46 9.9E-06 38.1 6.1 29 150-180 188-216 (313)
499 PF05445 Pox_ser-thr_kin: Poxv 91.2 0.31 6.8E-06 39.8 3.9 54 127-183 274-349 (434)
500 smart00587 CHK ZnF_C4 abd HLH 90.9 0.26 5.5E-06 37.0 3.1 35 150-184 121-159 (196)
No 1
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-42 Score=270.62 Aligned_cols=191 Identities=25% Similarity=0.466 Sum_probs=164.3
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
....++| .+.+.||+|+|+.||+|++++++..||||.+..... ....++.+..|+.+|+.++||||+.+++++ +.
T Consensus 6 ~~~~~~y-~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l--~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~--~~ 80 (429)
T KOG0595|consen 6 MRVVGDY-ELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL--NKKLVELLLSEIKILKELKHPNIVRLLDCI--ED 80 (429)
T ss_pred ccccccc-eehhhccCcceEEEEEeEeccCCceEEeeeehhhcc--CHHHHHHHHHHHHHHHhcCCcceeeEEEEE--ec
Confidence 3445677 566889999999999999999999999999987654 456667888999999999999999999999 55
Q ss_pred CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC-C----CcEEEec
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN-T----GQVKIGD 174 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~-~----~~~~l~d 174 (219)
.+++|+|||||.||+|.++++..+.+++.+++.++.|++.|+++||+++ |+||||||+|||++.. . ..+||+|
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~--IiHRDLKPQNiLLs~~~~~~~~~~LKIAD 158 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN--IIHRDLKPQNILLSTTARNDTSPVLKIAD 158 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCcceEEeccCCCCCCCceEEecc
Confidence 6789999999999999999999999999999999999999999999999 9999999999999753 1 2479999
Q ss_pred cccceeccccceeeeecccCc----cccCCCccccccceeeec--cccc
Q 027788 175 LGVAAIVGRAIRRIRCWGRRS----SWRRSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 175 fg~a~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~diws~g--i~~~ 217 (219)
||+|+.+.......+.+|+|- +......|+.|+|+||.| +|.|
T Consensus 159 FGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~ 207 (429)
T KOG0595|consen 159 FGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQC 207 (429)
T ss_pred cchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHH
Confidence 999999998776555666543 223477799999999999 4443
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-39 Score=254.40 Aligned_cols=192 Identities=22% Similarity=0.345 Sum_probs=154.5
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH---HHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP---AMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
..+|-+.+.+|+|+||.|-+|+..++++.||||+++.+...... .......+|+++|++|+||||++++++| +..
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f--~~~ 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF--EVP 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee--ecC
Confidence 45558999999999999999999999999999999987654321 1223457999999999999999999999 555
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcEEEeccccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQVKIGDLGVA 178 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~~l~dfg~a 178 (219)
.+.|+||||+.||+|.+++-.++.+.+.....+++|++.|+.|||+++ |.||||||+|||++.+. -.+||+|||+|
T Consensus 249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G--I~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG--IIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC--cccccCCcceEEeccCCcceEEEecccchh
Confidence 667899999999999999988888999999999999999999999999 99999999999997542 25799999999
Q ss_pred eeccccce-----eeeecccCccccC-CCccc-cccceeeeccccccC
Q 027788 179 AIVGRAIR-----RIRCWGRRSSWRR-SCTMR-ITRSLWTYTRLGCAC 219 (219)
Q Consensus 179 ~~~~~~~~-----~~~~~~~~~~~~~-~~~~~-~~~diws~gi~~~~c 219 (219)
+..+.... ++..+.+|+-... ..++. .+-||||+|++-+-|
T Consensus 327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc 374 (475)
T KOG0615|consen 327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC 374 (475)
T ss_pred hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence 98875443 3334444443322 22233 368999999554443
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-39 Score=263.40 Aligned_cols=190 Identities=28% Similarity=0.503 Sum_probs=168.8
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
...|+..+.|...++||+|+|+++|.+++..+|..||+|++.++... .+.+.+.+.+||++++.|+||||++++++|
T Consensus 11 ~i~D~~~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-- 87 (592)
T KOG0575|consen 11 VIEDPRSKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-KPKQREKVLNEIEIHRSLKHPNIVQFYHFF-- 87 (592)
T ss_pred eeecCCcceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-CcchHHHHHHHHHHHHhcCCCcEEeeeeEe--
Confidence 45666678889999999999999999999999999999999875553 567788999999999999999999999999
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
++.+++|++.|.|.+++|..+++....+++..++.++.||+.|+.|||+.+ |+|||||..|++++.+. ++||+|||+
T Consensus 88 EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~--IiHRDLKLGNlfL~~~~-~VKIgDFGL 164 (592)
T KOG0575|consen 88 EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG--IIHRDLKLGNLFLNENM-NVKIGDFGL 164 (592)
T ss_pred ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC--ceecccchhheeecCcC-cEEecccce
Confidence 788899999999999999999988789999999999999999999999999 99999999999999775 899999999
Q ss_pred ceecccc-ceeeeecccCc----cccCCCccccccceeeec
Q 027788 178 AAIVGRA-IRRIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
|..+..+ +...+.+|+|- +.......+..+||||+|
T Consensus 165 At~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlG 205 (592)
T KOG0575|consen 165 ATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLG 205 (592)
T ss_pred eeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhh
Confidence 9999865 55555566654 334466778889999999
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-39 Score=251.10 Aligned_cols=180 Identities=26% Similarity=0.462 Sum_probs=157.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+.|.||++.++.+++.+|+|.+.... ++...+.+.+|++++++.+||+|+.+++.|..+.. .+.++||||
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~---~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~mEYM 160 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNI---DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICMEYM 160 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccC---CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeehhhc
Confidence 68999999999999999999999999996443 57777889999999999999999999999987765 689999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
++|+|.+++...+.+++.....++.+|+.||.|||. .. |+||||||+|+|++.. |.+||+|||.+..+.....
T Consensus 161 DgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~--IIHRDIKPsNlLvNsk-GeVKicDFGVS~~lvnS~a~tf 237 (364)
T KOG0581|consen 161 DGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK--IIHRDIKPSNLLVNSK-GEVKICDFGVSGILVNSIANTF 237 (364)
T ss_pred CCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC--eeeccCCHHHeeeccC-CCEEeccccccHHhhhhhcccc
Confidence 999999998887889999999999999999999996 67 9999999999999976 7999999999998876642
Q ss_pred -eeeecccCccccCCCccccccceeeec--ccccc
Q 027788 187 -RIRCWGRRSSWRRSCTMRITRSLWTYT--RLGCA 218 (219)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~diws~g--i~~~~ 218 (219)
++.++-+||.. ....|+.++|||||| +|.++
T Consensus 238 vGT~~YMsPERi-~g~~Ys~~sDIWSLGLsllE~a 271 (364)
T KOG0581|consen 238 VGTSAYMSPERI-SGESYSVKSDIWSLGLSLLELA 271 (364)
T ss_pred cccccccChhhh-cCCcCCcccceecccHHHHHHh
Confidence 55555555443 445788889999999 76654
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=246.33 Aligned_cols=187 Identities=18% Similarity=0.275 Sum_probs=161.8
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
-.-+.+.+.||+|+||+||+++.+++++.+|+|+++++..... ...++..+|..++..++||+|++++..|+++ ..+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--~kL 100 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-KEVRHTKAERNILSKIKHPFIVKLIYSFQTE--EKL 100 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-hhHHHHHHHHHHHHhCCCCcEeeeEEecccC--CeE
Confidence 3445788999999999999999999999999999997765433 4568899999999999999999999999655 459
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|+|+||++||.|...++.++.+++..+..++..++.||.|||+.+ |+||||||+|||++.+ |.++|+|||+|+..-.
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g--IiyRDlKPENILLd~~-GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG--IIYRDLKPENILLDEQ-GHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHeeecCC-CcEEEeccccchhccc
Confidence 999999999999999999999999999999999999999999999 9999999999999955 7999999999996655
Q ss_pred cce-eeeecccCc----cccCCCccccccceeeecccc
Q 027788 184 AIR-RIRCWGRRS----SWRRSCTMRITRSLWTYTRLG 216 (219)
Q Consensus 184 ~~~-~~~~~~~~~----~~~~~~~~~~~~diws~gi~~ 216 (219)
... ..+.+|+++ +.....+|+...|-|||||+.
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGill 215 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILL 215 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHH
Confidence 543 333467765 344566899999999999654
No 6
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-38 Score=261.04 Aligned_cols=203 Identities=52% Similarity=0.910 Sum_probs=187.8
Q ss_pred CCCCCCCccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCce
Q 027788 10 SDKDSEPFIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNII 89 (219)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 89 (219)
.+.+...+.+.++.+||.++...||+|+|-+||+|.+..+|.+||+-.++.+.....+..+++|..|+++|+.|+|+||+
T Consensus 25 ~e~~~~~~ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIi 104 (632)
T KOG0584|consen 25 SEPDESEFVEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNII 104 (632)
T ss_pred hccccccccccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCcee
Confidence 34556678899999999999999999999999999999999999999999888888899999999999999999999999
Q ss_pred EEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCc
Q 027788 90 SLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQ 169 (219)
Q Consensus 90 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~ 169 (219)
+++++|.+.+...+.+++|.+..|+|..++.+++.++...+..|++||+.||.|||++.|||+|||||.+|||++.+.|.
T Consensus 105 rfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~ 184 (632)
T KOG0584|consen 105 RFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGE 184 (632)
T ss_pred eeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCc
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccceeccccceeeeecccCcccc---CCCccccccceeeec
Q 027788 170 VKIGDLGVAAIVGRAIRRIRCWGRRSSWR---RSCTMRITRSLWTYT 213 (219)
Q Consensus 170 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~diws~g 213 (219)
|||.|+|+|.......... ..|+|+... -...|+-..||||||
T Consensus 185 VKIGDLGLAtl~r~s~aks-vIGTPEFMAPEmYEE~YnE~VDVYaFG 230 (632)
T KOG0584|consen 185 VKIGDLGLATLLRKSHAKS-VIGTPEFMAPEMYEENYNELVDVYAFG 230 (632)
T ss_pred eeecchhHHHHhhccccce-eccCccccChHHHhhhcchhhhhhhhh
Confidence 9999999999988877654 889988543 246788889999999
No 7
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=231.83 Aligned_cols=183 Identities=22% Similarity=0.335 Sum_probs=161.2
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+.+|.|+||+|.+++.+.+|..+|+|++++...- ...++++..+|..+|+.+.||+++++++.++ +...++++|
T Consensus 47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vV-klKQveH~~nEk~vL~~v~~PFlv~l~~t~~--d~~~lymvm 123 (355)
T KOG0616|consen 47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVV-KLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK--DNSNLYMVM 123 (355)
T ss_pred hheeeeccCccceEEEEEEccCCceeehhhcCHHHHH-HHHHHHHHhhHHHHHhhccCceeEEEEEeec--cCCeEEEEE
Confidence 4457899999999999999999999999999876543 4678899999999999999999999999995 456799999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
||.+||.|++++++.+++++...+.++.||+.|++|||+.+ |++|||||+|+|++.+ |.+||.|||+|+..... .
T Consensus 124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~--iiYRDLKPENiLlD~~-G~iKitDFGFAK~v~~r--T 198 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD--IIYRDLKPENLLLDQN-GHIKITDFGFAKRVSGR--T 198 (355)
T ss_pred eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC--eeeccCChHHeeeccC-CcEEEEeccceEEecCc--E
Confidence 99999999999999999999999999999999999999999 9999999999999966 79999999999987665 2
Q ss_pred eeecccCc----cccCCCccccccceeeec--ccccc
Q 027788 188 IRCWGRRS----SWRRSCTMRITRSLWTYT--RLGCA 218 (219)
Q Consensus 188 ~~~~~~~~----~~~~~~~~~~~~diws~g--i~~~~ 218 (219)
-+.+|+|+ +...+.+|+.+.|-|||| |+.+.
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl 235 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML 235 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH
Confidence 34567766 345678888889999999 66554
No 8
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-36 Score=245.78 Aligned_cols=185 Identities=25% Similarity=0.426 Sum_probs=153.8
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
..|.++ ++||+|+||.||+|++..+|+.||+|.+..... ++.+..-..+||.+|++|+||||+++.+.........+
T Consensus 117 ~~feki-~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~--~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 117 DSFEKI-EKIGEGTYGQVYKARDLETGKIVALKKVRFDNE--KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred HHHHHH-HHhcCcchhheeEeeecccCcEEEEEEeecccC--CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 345444 789999999999999999999999998876653 45666777899999999999999999999988777889
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|+|.|||+. +|..++... -.|++.++..++.|++.||.|+|.++ ++|||||..|||+|.+ |.+||+|||+|+.+.
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g--vlHRDIK~SNiLidn~-G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG--VLHRDIKGSNILIDNN-GVLKIADFGLARFYT 269 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC--eeeccccccceEEcCC-CCEEeccccceeecc
Confidence 999999974 888877653 47999999999999999999999999 9999999999999944 799999999999886
Q ss_pred cccee--e----eecccCcc-ccCCCccccccceeeec-cc
Q 027788 183 RAIRR--I----RCWGRRSS-WRRSCTMRITRSLWTYT-RL 215 (219)
Q Consensus 183 ~~~~~--~----~~~~~~~~-~~~~~~~~~~~diws~g-i~ 215 (219)
..... + +.|++|++ .+-+..|...-|+||.| |+
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl 310 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCIL 310 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHH
Confidence 65532 1 12333333 44566688889999999 44
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-38 Score=241.08 Aligned_cols=186 Identities=25% Similarity=0.424 Sum_probs=156.8
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
..| ++.++||+|.||+||++....+|..+|.|.++-... +....+....|+.+|++|+||||+++++.-..++...+
T Consensus 19 ~~y-~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m--d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 19 ADY-QILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM--DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred HHH-HHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc--cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 344 888999999999999999999999999999885443 56667889999999999999999999884444555668
Q ss_pred EEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCC--eeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 104 NFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPC--VIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~--i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
+++||+|.+|+|...++. ...+++..+++++.|++.||..+|..-+. ++||||||.||+++.+ |.+||.|||+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~-gvvKLGDfGL 174 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN-GVVKLGDFGL 174 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC-Cceeeccchh
Confidence 899999999999987752 34689999999999999999999984333 9999999999999955 6999999999
Q ss_pred ceeccccce-eeeecccCc----cccCCCccccccceeeec
Q 027788 178 AAIVGRAIR-RIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
++.+..... .++.+|+|- +...+.+|+++|||||+|
T Consensus 175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslG 215 (375)
T KOG0591|consen 175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLG 215 (375)
T ss_pred HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHH
Confidence 999887664 444566543 345677899999999999
No 10
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-36 Score=243.41 Aligned_cols=189 Identities=24% Similarity=0.418 Sum_probs=154.5
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH-HHHHHHHHHHHHHHhhC-CCCceEEEEEEecC
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP-AMIERLFSEVRLLKTLA-NKNIISLHYVWRDE 98 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~ 98 (219)
...++| .+.+.||+|+||.|+.|.+..++..||+|+++.+...... ...+.+.+|+.+++.+. ||||+++++++..+
T Consensus 14 ~~~g~y-~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 14 LSIGKY-ELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred cccCce-eeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 344566 8889999999999999999999999999977754222111 34466778999999999 99999999999666
Q ss_pred CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
.. ++++|||+.+|+|.+++...+.+.+..+.+++.|+++|+.|+|+++ |+||||||+|++++.+.+++||+|||++
T Consensus 93 ~~--~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g--i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 93 TK--IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG--IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred Ce--EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 54 8999999999999999988889999999999999999999999999 9999999999999976368999999999
Q ss_pred eecc-ccceeeeecccCc----cccCCCc-cc-cccceeeecc
Q 027788 179 AIVG-RAIRRIRCWGRRS----SWRRSCT-MR-ITRSLWTYTR 214 (219)
Q Consensus 179 ~~~~-~~~~~~~~~~~~~----~~~~~~~-~~-~~~diws~gi 214 (219)
.... ........+|+|. ++..... |. .++|+||+||
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV 211 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV 211 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence 9883 4333333344322 4444444 76 4599999993
No 11
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=236.60 Aligned_cols=192 Identities=22% Similarity=0.376 Sum_probs=163.4
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
..+.+....|.+...||.|..+.||+|+...++..||||+++.+... ..++.+++|+..++.++||||++++.+|..
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~---~~ld~l~kE~~~msl~~HPNIv~~~~sFvv 95 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN---NDLDALRKEVQTMSLIDHPNIVTYHCSFVV 95 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh---hhHHHHHHHHHHhhhcCCCCcceEEEEEEe
Confidence 45566666778999999999999999999999999999999988753 236889999999999999999999999966
Q ss_pred CCCceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
. ..+|+||++|.+|++.+.+... ..+++..+..++++++.||.|||+++ .+|||+|+.|||++.+ |.|||+||
T Consensus 96 ~--~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G--~IHRdvKAgnILi~~d-G~VkLadF 170 (516)
T KOG0582|consen 96 D--SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG--HIHRDVKAGNILIDSD-GTVKLADF 170 (516)
T ss_pred c--ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC--ceecccccccEEEcCC-CcEEEcCc
Confidence 5 4599999999999999988754 35899999999999999999999999 9999999999999966 79999999
Q ss_pred ccceeccccce----------eeeecccCcc-ccCCCccccccceeeeccccc
Q 027788 176 GVAAIVGRAIR----------RIRCWGRRSS-WRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 176 g~a~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~diws~gi~~~ 217 (219)
|.+..+..... ++.+|-+|+- ...-.+|+.|+|||||||+||
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ 223 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITAC 223 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHH
Confidence 98877754332 2334444444 456777999999999999886
No 12
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.3e-36 Score=233.29 Aligned_cols=190 Identities=20% Similarity=0.318 Sum_probs=159.3
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
.-....|.++ ..|++|+||.||+|.++++++.||+|.++.+.. ..++.--.++||.+|.+++||||+.+..+....+
T Consensus 72 Crsv~efe~l-nrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--k~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 72 CRSVEEFEKL-NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--KEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred cccHHHHHHH-hhcccCcceeEEEeccCCcceeEEeeecccccc--cCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 3345666444 689999999999999999999999999886542 3444444678999999999999999999998888
Q ss_pred CceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 RNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
.+.+|+|||||+ .+|.+++..- .++....+..++.|++.|+.|||.+. |+|||||++|+|++.. |.+||+|||+|
T Consensus 149 ~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w--ilHRDLK~SNLLm~~~-G~lKiaDFGLA 224 (419)
T KOG0663|consen 149 MDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW--ILHRDLKTSNLLLSHK-GILKIADFGLA 224 (419)
T ss_pred cceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce--eEecccchhheeeccC-CcEEecccchh
Confidence 889999999997 5999988654 48999999999999999999999999 9999999999999844 78999999999
Q ss_pred eecccccee------eeecccCccccCCCccccccceeeec-ccc
Q 027788 179 AIVGRAIRR------IRCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 179 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
+.+.++... +-.+++|+-...++.|+.+-|+||.| |+|
T Consensus 225 R~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 225 REYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred hhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence 999988642 12333444456778899999999999 554
No 13
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.4e-36 Score=226.62 Aligned_cols=183 Identities=30% Similarity=0.442 Sum_probs=149.3
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
+| ...+.+|+|.||.||+|++.++|+.||+|.++.... .+..-....+||+.|+.++|+||+.+.++|.. ...+.
T Consensus 3 rY-~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~--kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--~~~l~ 77 (318)
T KOG0659|consen 3 RY-EKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA--KDGINRTALREIKLLQELKHPNIIELIDVFPH--KSNLS 77 (318)
T ss_pred hh-hhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc--ccCccHHHHHHHHHHHHccCcchhhhhhhccC--CCceE
Confidence 45 344899999999999999999999999999998754 23333456789999999999999999999954 45588
Q ss_pred EEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 105 FITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+|.||++ .+|...++.. -.++...+..++.+++.|++|||++. |+||||||.|+|++++ |.+||+|||+|+.+.+
T Consensus 78 lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~--IlHRDlKPnNLLis~~-g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 78 LVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW--ILHRDLKPNNLLISSD-GQLKIADFGLARFFGS 153 (318)
T ss_pred EEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh--hhcccCCccceEEcCC-CcEEeecccchhccCC
Confidence 8999997 6999888754 46889999999999999999999999 9999999999999966 6999999999999987
Q ss_pred cceee------eecccCccccCCCccccccceeeec-ccc
Q 027788 184 AIRRI------RCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 184 ~~~~~------~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
+.... +.+++|+-...++.|...-||||.| |+|
T Consensus 154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~A 193 (318)
T KOG0659|consen 154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFA 193 (318)
T ss_pred CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHH
Confidence 76532 2333333344455577778888888 543
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=246.40 Aligned_cols=182 Identities=25% Similarity=0.431 Sum_probs=156.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+++.||+|+|++|++|++.+++++||||++.++... .+..++-+..|-++|.+| .||.|++++..|+++ ..+|+
T Consensus 75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii-ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~--~sLYF 151 (604)
T KOG0592|consen 75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII-KEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE--ESLYF 151 (604)
T ss_pred cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHH-hhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc--cceEE
Confidence 38899999999999999999999999999999876654 355567788899999999 899999999999665 45899
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++||+++|+|.+++++.+.+++...+.++.+|+.+++|||+++ |+||||||+|||++.| ++++|.|||.|+.+++..
T Consensus 152 vLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G--IIHRDlKPENILLd~d-mhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG--IIHRDLKPENILLDKD-GHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeEcCC-CcEEEeeccccccCChhh
Confidence 9999999999999999999999999999999999999999999 9999999999999977 589999999999986644
Q ss_pred ee--------------eeeccc----CccccCCCccccccceeeecc
Q 027788 186 RR--------------IRCWGR----RSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~~--------------~~~~~~----~~~~~~~~~~~~~~diws~gi 214 (219)
.. .+.+|+ +++.+.....+..+|||+||+
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGC 275 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGC 275 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHH
Confidence 32 234444 224555666677799999994
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9e-36 Score=227.42 Aligned_cols=182 Identities=24% Similarity=0.426 Sum_probs=145.7
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+|.++ .++|+|+||.||+|+++.+|+.||||.+.... +++..-+-.++||..|++|.|+|++.+..+| ..+..+
T Consensus 2 ekYE~L-gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese--dd~~VkKIAlREIrmLKqLkH~NLVnLiEVF--rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKL-GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE--DDPVVKKIALREIRMLKQLKHENLVNLIEVF--RRKRKL 76 (396)
T ss_pred cHHhhh-hccccCcceEEEEeccCCcccEEEEEeeccCC--ccHHHHHHHHHHHHHHHhcccchHHHHHHHH--Hhccee
Confidence 355555 68999999999999999999999999987543 2444446678999999999999999999999 455668
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++|.|||+..-|..+-.....++...+..+++|++.|+.|+|.++ ++||||||+||+++.+ +.+||+|||+|+.+..
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n--~IHRDIKPENILit~~-gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN--CIHRDIKPENILITQN-GVVKLCDFGFARTLSA 153 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC--eecccCChhheEEecC-CcEEeccchhhHhhcC
Confidence 999999987655554333456899999999999999999999999 9999999999999966 6899999999999885
Q ss_pred cce------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.. .++++++|+-......|..+-|||+.|
T Consensus 154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiG 189 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIG 189 (396)
T ss_pred CcchhhhhhhhhhccChhhhcccCcCCCcccchhhh
Confidence 433 222333333333334578888998888
No 16
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.1e-36 Score=236.16 Aligned_cols=185 Identities=22% Similarity=0.402 Sum_probs=162.8
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
+.|.+.+.||+|.||.|-+|++...|+.||||.+.+.... +...+-++++||+++..|+||||+.++.+| ++++-+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlvhIRREIeIMSsLNHPhII~IyEVF--ENkdKIv 129 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLVHIRREIEIMSSLNHPHIIQIYEVF--ENKDKIV 129 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHHHHHHHHHHHhhcCCCceeehhhhh--cCCceEE
Confidence 3347888999999999999999999999999999877664 456668899999999999999999999999 8888899
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||||..+|.|.++++..+.+++...+.+++||++|+.|+|.++ ++|||||.+|||++.+ +++||+|||++-.+...
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr--VvHRDLKLENILLD~N-~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR--VVHRDLKLENILLDQN-NNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc--ceecccchhheeecCC-CCeeeeccchhhhhccc
Confidence 99999999999999999999999999999999999999999999 9999999999999977 58999999999988877
Q ss_pred ceeeeecccCc----cccCCCccccc-cceeeeccc
Q 027788 185 IRRIRCWGRRS----SWRRSCTMRIT-RSLWTYTRL 215 (219)
Q Consensus 185 ~~~~~~~~~~~----~~~~~~~~~~~-~diws~gi~ 215 (219)
.--++.+|+|- +.....+|..+ -|-|||||+
T Consensus 207 kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvL 242 (668)
T KOG0611|consen 207 KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVL 242 (668)
T ss_pred cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHH
Confidence 76666666543 44556666555 899999954
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=242.08 Aligned_cols=184 Identities=32% Similarity=0.407 Sum_probs=155.5
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCC
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDED 99 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~ 99 (219)
....|| .+.++||.|+||.||+|..+.++..||||..+.+... ..-..=++|+..|++|+ ||||+++.+++.+.+
T Consensus 7 ~~m~RY-~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s---~ee~~nLREvksL~kln~hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 7 IFMDRY-TVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNPHPNIIKLKEVIRDND 82 (538)
T ss_pred hHHHHH-HHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc---HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC
Confidence 345666 6779999999999999999999999999998866531 21123357999999999 999999999997655
Q ss_pred CceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 RNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
. .+++|||+|+ -+|.+++.. ...+++..+..|+.||++||.++|.+| +.|||+||+|||+.... .+||+|||+|
T Consensus 83 ~-~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G--fFHRDlKPENiLi~~~~-~iKiaDFGLA 157 (538)
T KOG0661|consen 83 R-ILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG--FFHRDLKPENILISGND-VIKIADFGLA 157 (538)
T ss_pred c-eEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC--cccccCChhheEecccc-eeEecccccc
Confidence 3 8999999997 599998864 456999999999999999999999999 99999999999998553 7999999999
Q ss_pred eeccccce-----eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.+.+... +++.+++|+-..++.-|+.+-|+|++|
T Consensus 158 Rev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~G 197 (538)
T KOG0661|consen 158 REVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVG 197 (538)
T ss_pred cccccCCCcchhhhcccccchHHhhhccccCCchHHHHHH
Confidence 98866443 666677777777888899999999999
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-35 Score=236.09 Aligned_cols=183 Identities=22% Similarity=0.373 Sum_probs=148.7
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
.+....+..++.+.||+|.||.||.|.... ...||+|.++.... ..+.|.+|+.++++|+|+||++++++|..+
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m-----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM-----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc-----ChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 334555666888999999999999998753 35799999886432 225677999999999999999999999665
Q ss_pred CCceEEEEeccccCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKK--HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
+ .++|||||++.|+|.++++. ...++....+.++.|||+|++||.+++ ++||||..+|||++.+ ..+||+|||
T Consensus 274 ~--piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~--~IHRDLAARNiLV~~~-~~vKIsDFG 348 (468)
T KOG0197|consen 274 E--PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN--YIHRDLAARNILVDED-LVVKISDFG 348 (468)
T ss_pred C--ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC--ccchhhhhhheeeccC-ceEEEcccc
Confidence 4 58999999999999999986 457899999999999999999999999 9999999999999966 589999999
Q ss_pred cceeccccceeeeeccc--Ccccc-----CCCccccccceeeec
Q 027788 177 VAAIVGRAIRRIRCWGR--RSSWR-----RSCTMRITRSLWTYT 213 (219)
Q Consensus 177 ~a~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~diws~g 213 (219)
+|+.. .+...+...++ |..|+ ....++.+||+||||
T Consensus 349 LAr~~-~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFG 391 (468)
T KOG0197|consen 349 LARLI-GDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFG 391 (468)
T ss_pred ccccc-CCCceeecCCCCCCceecCHHHHhhCCcccccceeehh
Confidence 99943 33333333332 33343 344588899999999
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=241.10 Aligned_cols=189 Identities=24% Similarity=0.408 Sum_probs=161.6
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
...||..+|..+ .+||+|+.|.||.|....++..||+|.+..... ...+.+.+|+.+++..+|+||+.+++.|..
T Consensus 267 ~~~dP~~~y~~~-~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q----~~keLilnEi~Vm~~~~H~NiVnfl~Sylv 341 (550)
T KOG0578|consen 267 SQGDPRSKYTDF-KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ----PKKELLLNEILVMRDLHHPNIVNFLDSYLV 341 (550)
T ss_pred cCCChhhhhcch-hhhccccccceeeeeeccCCceEEEEEEEeccC----CchhhhHHHHHHHHhccchHHHHHHHHhcc
Confidence 457788888655 899999999999999999999999999987743 233778899999999999999999988865
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
. +.+|+||||+++|+|.+..... .+++.++..++++++.||.|||.++ |+|||||.+||+++.+ |.+||+|||+
T Consensus 342 ~--deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~g--IiHrDIKSDnILL~~~-g~vKltDFGF 415 (550)
T KOG0578|consen 342 G--DELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARG--IIHRDIKSDNILLTMD-GSVKLTDFGF 415 (550)
T ss_pred c--ceeEEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcc--eeeeccccceeEeccC-CcEEEeeeee
Confidence 5 5599999999999999977643 5999999999999999999999999 9999999999999866 6899999999
Q ss_pred ceeccccc-eeeeecccCc----cccCCCccccccceeeeccccc
Q 027788 178 AAIVGRAI-RRIRCWGRRS----SWRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 178 a~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~diws~gi~~~ 217 (219)
|..+.... .+.+.+|+|. +......|..+.|||||||.++
T Consensus 416 caqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaI 460 (550)
T KOG0578|consen 416 CAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAI 460 (550)
T ss_pred eeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHH
Confidence 99987766 4555667642 2345677899999999997664
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-34 Score=224.84 Aligned_cols=183 Identities=25% Similarity=0.440 Sum_probs=150.2
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
..+...+.||+|+||.||.+.+.++|...|+|.+.... ... .+.+.+|+.+|.+++||||+++++.........++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 33577799999999999999999999999999987652 222 67788999999999999999999864333224688
Q ss_pred EEeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 105 FITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++|||+++|+|.+++...+ .+++..+.++..|++.|+.|||+++ ++|+|||++|||++...+.+||+|||.++....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g--~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG--IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 9999999999999998876 7999999999999999999999999 999999999999997335899999999987763
Q ss_pred ---------cceeeeecccCccccCCCccccccceeeec
Q 027788 184 ---------AIRRIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ---------~~~~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...++..|-+|+.+........++||||+|
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG 209 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG 209 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence 112455566666665533333479999999
No 21
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-34 Score=231.75 Aligned_cols=184 Identities=24% Similarity=0.367 Sum_probs=151.3
Q ss_pred eeeeeeccccceEEEEEEecCCCcE-EEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIE-VAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
.+.+.||+|+||.||+|... |.. ||+|.+..... ++...+.|..|+.++.+++||||+++++++..+.. .+.+|
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iV 118 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDF--DDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIV 118 (362)
T ss_pred hhhhhcccCCceeEEEEEeC--CceeEEEEEecchhc--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEE
Confidence 34456999999999999875 445 99999886544 23337899999999999999999999999965431 57899
Q ss_pred eccccCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKK--HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++|+|.+++.. ...++...+..++.+|+.|+.|||++++ |+|||||++|+|++.+...+||+|||+++.....
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC-eeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 999999999999876 5789999999999999999999999987 8999999999999966338999999999877653
Q ss_pred c------eeeeecccCccccC-CCccccccceeeec--cccc
Q 027788 185 I------RRIRCWGRRSSWRR-SCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 185 ~------~~~~~~~~~~~~~~-~~~~~~~~diws~g--i~~~ 217 (219)
. .++..|.+|+-+.. ...|+.++|+|||| +|.+
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl 239 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWEL 239 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHH
Confidence 2 24445566554443 57899999999999 6654
No 22
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=223.55 Aligned_cols=177 Identities=25% Similarity=0.394 Sum_probs=147.8
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc---e
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN---T 102 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~---~ 102 (219)
.+.-.+++|+|+||.||+|....+++.||||.+-++..- -.+|+++++++.||||+++..+|...... +
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 345568999999999999999999999999987654321 12699999999999999998888654433 6
Q ss_pred EEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 103 LNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+.+||||+|. +|...++. ...++.-.+.-++.|++.|+.|||..+ |+||||||.|+|+|.+.|.+||+|||.|
T Consensus 97 lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~--IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 97 LNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG--ICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC--cccCCCChheEEEcCCCCeEEeccCCcc
Confidence 6789999984 88887763 457888889999999999999999999 9999999999999999889999999999
Q ss_pred eeccccce-----eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.+..... -++.+++||-.....+|+.+-||||.|
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaG 213 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAG 213 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhh
Confidence 99977664 333455566677888899999999999
No 23
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-35 Score=238.60 Aligned_cols=208 Identities=25% Similarity=0.389 Sum_probs=175.2
Q ss_pred CCCCCCCCCCCCCCC---ccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH
Q 027788 2 MPAVNSDPSDKDSEP---FIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR 78 (219)
Q Consensus 2 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~ 78 (219)
||+.+...+.++++. |..-||...|..+ +.||.|+||-||.|++..+.+.||||....... ......+.+.+|+.
T Consensus 1 ~pa~~r~GslKDPeiA~LF~k~DPEklf~dL-rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK-Qs~EKWqDIlKEVr 78 (948)
T KOG0577|consen 1 MPAGGRPGSLKDPEIADLFFKDDPEKLFSDL-REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDILKEVR 78 (948)
T ss_pred CCCCCCCCCCCCchHHHHHccCCHHHHHHHH-HHhcCCccceeEEeeccCccceeeeeecccccc-ccHHHHHHHHHHHH
Confidence 677677777777654 6788888888777 899999999999999999999999998764433 24566789999999
Q ss_pred HHHhhCCCCceEEEEEEecCCCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCC
Q 027788 79 LLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLN 157 (219)
Q Consensus 79 ~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~ 157 (219)
.|+.+.|||.+.+.++|..+. ..|+|||||- |+..+++.-+ .++.+..+.-|+.+.+.||.|||+.+ .+|||||
T Consensus 79 FL~~l~HPntieYkgCyLre~--TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~--~IHRDiK 153 (948)
T KOG0577|consen 79 FLRQLRHPNTIEYKGCYLREH--TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--RIHRDIK 153 (948)
T ss_pred HHHhccCCCcccccceeeccc--hHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh--HHhhhcc
Confidence 999999999999999986554 4788999996 6888888754 47889999999999999999999999 9999999
Q ss_pred CCceEEeCCCCcEEEeccccceeccccce--eeeecccCccc--cCCCccccccceeeeccccc
Q 027788 158 CSNVFVNGNTGQVKIGDLGVAAIVGRAIR--RIRCWGRRSSW--RRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 158 ~~nili~~~~~~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~diws~gi~~~ 217 (219)
.-|||++. .|.|||+|||.|....+... ++..|-+|+-. +..+.|+.+.|||||||++|
T Consensus 154 AGNILLse-~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCI 216 (948)
T KOG0577|consen 154 AGNILLSE-PGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 216 (948)
T ss_pred ccceEecC-CCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhh
Confidence 99999984 47899999999988776543 56666666643 57888999999999998876
No 24
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=228.52 Aligned_cols=180 Identities=19% Similarity=0.324 Sum_probs=144.2
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.-...||+|+||.||+|.- .++..||||.+..... .. ..+|.+|++++.+++|||+++++++|.+.+. ..+||+
T Consensus 78 s~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~---~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~-~~~LVY 151 (361)
T KOG1187|consen 78 SESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSG---QG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGE-HRLLVY 151 (361)
T ss_pred chhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCC---cc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-eEEEEE
Confidence 4446899999999999984 5568999997764432 11 3559999999999999999999999975543 467899
Q ss_pred ccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC-CCeeeeCCCCCceEEeCCCCcEEEeccccceeccc-
Q 027788 108 EVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHE-PCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR- 183 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~-~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~- 183 (219)
||+++|+|.+++.... .++|..+.+|+.+++.||+|||... ++|+|||||+.|||+|.+. +.||+|||+|+..+.
T Consensus 152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-NAKLSDFGLAKLGPEG 230 (361)
T ss_pred EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC-CEEccCccCcccCCcc
Confidence 9999999999886553 7899999999999999999999854 4799999999999999775 899999999976654
Q ss_pred ccee----eeec-ccCccccCCCccccccceeeecc
Q 027788 184 AIRR----IRCW-GRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 184 ~~~~----~~~~-~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... .... ...+++......+.++|+|||||
T Consensus 231 ~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGV 266 (361)
T KOG1187|consen 231 DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGV 266 (361)
T ss_pred ccceeeecCCCCccCChhhhccCCcCcccccccchH
Confidence 2221 1111 23345666677788999999994
No 25
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=219.50 Aligned_cols=183 Identities=26% Similarity=0.446 Sum_probs=149.7
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC-ceEEEEEEecCC---
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN-IISLHYVWRDED--- 99 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~--- 99 (219)
..|.++ ++||+|+||.||+|+.+.+|+.||+|.+...... ++.-.-..+|+.++++++|+| |+.+++++...+
T Consensus 11 ~~~~~~-eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 11 FDYEKV-EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHH-HHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence 345455 4599999999999999999999999999876542 222234568999999999999 999999997654
Q ss_pred -CceEEEEeccccCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEec
Q 027788 100 -RNTLNFITEVCTSGNLREYRKKHR----HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGD 174 (219)
Q Consensus 100 -~~~~~lv~e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~d 174 (219)
...+++++|++. .+|..++...+ .++...+..+++|++.|+.|||+++ |+||||||+|++++++ |.+||+|
T Consensus 88 ~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~--IlHRDLKPQNlLi~~~-G~lKlaD 163 (323)
T KOG0594|consen 88 GIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG--ILHRDLKPQNLLISSS-GVLKLAD 163 (323)
T ss_pred ccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCcceEEECCC-CcEeeec
Confidence 236889999996 69999887654 4777899999999999999999999 9999999999999965 7999999
Q ss_pred cccceeccccce------eeeecccCccccCCCccccccceeeec
Q 027788 175 LGVAAIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 175 fg~a~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
||+|+....+.. .+-.+++|+-.+.+..|++.-||||+|
T Consensus 164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~G 208 (323)
T KOG0594|consen 164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLG 208 (323)
T ss_pred cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHH
Confidence 999998875443 333444455566666799999999999
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=228.83 Aligned_cols=150 Identities=19% Similarity=0.333 Sum_probs=137.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|..+.||..+|+|++++.... .-.+++++++|..+|....+|.+++++..| ++..++||+
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~-~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF--QD~~~LYLi 219 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML-KKNQVEHVRAERDILAEVDSPWVVKLYYSF--QDKEYLYLI 219 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHH-hhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--cCCCeeEEE
Confidence 36678999999999999999999999999999976544 356789999999999999999999999999 456779999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+|||++.-++...+.++++.+.+++.+.+.|+..+|..+ ++||||||+|+|++.. |.+||+|||||..+.
T Consensus 220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g--yIHRDIKPdNlLiD~~-GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG--YIHRDIKPDNLLIDAK-GHIKLSDFGLSTGLD 292 (550)
T ss_pred EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC--cccccCChhheeecCC-CCEeeccccccchhh
Confidence 999999999999999999999999999999999999999999 9999999999999965 799999999997653
No 27
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1e-32 Score=227.56 Aligned_cols=149 Identities=17% Similarity=0.302 Sum_probs=131.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|++...... .....+++..|+.+++.++|+||+++++.+.. .+.++++
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-NRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 46778999999999999999999999999998754322 23455788999999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
|||+++|+|.+++.....+++..+..++.|++.||.|||..+ ++||||||+||+++.+ +.++|+|||++..+
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDlKp~Nili~~~-~~~kL~DFGl~~~~ 151 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG--FIHRDIKPDNILIDLD-GHIKLTDFGLCTGF 151 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCcHHHEEECCC-CCEEEeeCcCCccc
Confidence 999999999999887778999999999999999999999999 9999999999999865 68999999997643
No 28
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-33 Score=237.54 Aligned_cols=193 Identities=19% Similarity=0.296 Sum_probs=157.4
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEe
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWR 96 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~ 96 (219)
......++..++++.|.+|+|+.||.|.+...+..+|+|..-.. +...++.+++||+++++|+ |+||+.+++...
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~ 105 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSA 105 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence 44445667779999999999999999999888899999976543 5677899999999999997 999999998432
Q ss_pred ----cCC-CceEEEEeccccCCChHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCc
Q 027788 97 ----DED-RNTLNFITEVCTSGNLREYRK--KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQ 169 (219)
Q Consensus 97 ----~~~-~~~~~lv~e~~~~g~L~~~~~--~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~ 169 (219)
..+ ...++|+||||.+|.|.++++ .+..+++.++++|+.+++.|+.+||...++|+|||||.+|+|++.+ +.
T Consensus 106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~-g~ 184 (738)
T KOG1989|consen 106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD-GN 184 (738)
T ss_pred ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC-CC
Confidence 122 346789999999999999987 3456999999999999999999999999999999999999999855 68
Q ss_pred EEEeccccceeccccc-e--------------eeeecccCc--cccCCCccccccceeeeccc
Q 027788 170 VKIGDLGVAAIVGRAI-R--------------RIRCWGRRS--SWRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 170 ~~l~dfg~a~~~~~~~-~--------------~~~~~~~~~--~~~~~~~~~~~~diws~gi~ 215 (219)
+||+|||.+.-....- . .+..+++|| ..++.-+++.|+|||+||++
T Consensus 185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGcl 247 (738)
T KOG1989|consen 185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCL 247 (738)
T ss_pred EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHH
Confidence 9999999765432222 1 233455555 35788889999999999954
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.6e-33 Score=227.31 Aligned_cols=150 Identities=17% Similarity=0.318 Sum_probs=131.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|++...... .......+..|+.++.+++|+||+++++.+.. ...++++
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~~~~~lv 79 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-EKEQVGHIRAERDILVEADSLWVVKMFYSFQD--KLNLYLI 79 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCeEEEE
Confidence 36779999999999999999999999999998754321 23445778899999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+++|+|.+++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+++...
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--ivHrDlKp~NILi~~~-~~vkL~DFGla~~~~ 152 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG--FIHRDIKPDNLLLDSK-GHVKLSDFGLCTGLK 152 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CCEEEeeccCccccc
Confidence 999999999999988788999999999999999999999999 9999999999999865 689999999987653
No 30
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=219.20 Aligned_cols=188 Identities=27% Similarity=0.405 Sum_probs=155.7
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec---C
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD---E 98 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~ 98 (219)
...+| ...+.||+|+||.|..|.+..+|+.||+|.+.... ...-..++..+|+.+++.++|+||+.+.+++.. +
T Consensus 20 i~~~y-~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F--~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 20 IPRYY-VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF--ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred cccee-cccccccCcceeeEEEEEEcCCCCEeehhhhhhhh--hchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 33444 44689999999999999999999999999877333 245667999999999999999999999999865 3
Q ss_pred CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+-+-+|+|+|+++ .+|.+.++.+..++...+..+++|++.|+.|+|+.+ ++||||||.|++++.+. .+||+|||+|
T Consensus 97 ~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn--ViHRDLKPsNll~n~~c-~lKI~DFGLA 172 (359)
T KOG0660|consen 97 KFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN--VIHRDLKPSNLLLNADC-DLKICDFGLA 172 (359)
T ss_pred ccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc--ccccccchhheeeccCC-CEEeccccce
Confidence 4456899999994 799999988877999999999999999999999999 99999999999999775 7999999999
Q ss_pred eecccc----c----eeeeecccCccccCCCccccccceeeec-ccc
Q 027788 179 AIVGRA----I----RRIRCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 179 ~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
+..... . -.+..+++|+-.....+|+..-||||.| |+|
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~A 219 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILA 219 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHH
Confidence 988532 1 1344455555555566688888999998 654
No 31
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-32 Score=226.73 Aligned_cols=148 Identities=20% Similarity=0.302 Sum_probs=130.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|.+...... .....+++.+|+.+++.++||||+++++++. +...++++
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--~~~~~~lv 79 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF-KKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--DAQYLYLI 79 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhHHHHHHHHHHHHHHhCCCCCcceEEEEEE--cCCeeEEE
Confidence 36779999999999999999999999999998753321 2345577889999999999999999999985 44678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
|||+++|+|.+++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++..
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g--ivHrDlkp~NIll~~~-~~~kl~DfGla~~ 150 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG--FIHRDIKPDNILIDRG-GHIKLSDFGLSTG 150 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEEeecccccc
Confidence 999999999999887778999999999999999999999999 9999999999999865 6899999999964
No 32
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.7e-33 Score=226.31 Aligned_cols=150 Identities=19% Similarity=0.336 Sum_probs=132.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..+++.||+|++...... .......+..|+.+++.++||||+++++.+. +...++++
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--~~~~~~lv 79 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQVAHVRAERDILAEADNPWVVKLYYSFQ--DENYLYLI 79 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--cCCeEEEE
Confidence 36779999999999999999999999999999854322 2344567889999999999999999999985 45678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+++|+|.+++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++..+.
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~-~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG--YIHRDIKPDNLLLDAK-GHIKLSDFGLCTGLK 152 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEeecccceecc
Confidence 999999999999887778999999999999999999999999 9999999999999865 689999999997653
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-32 Score=223.24 Aligned_cols=183 Identities=22% Similarity=0.315 Sum_probs=151.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|.+..+++.||+|+++..... .....+.+.+|+.++++++||||+++++.+.. .+.+
T Consensus 18 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~ 93 (329)
T PTZ00263 18 SDF-EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRV 93 (329)
T ss_pred hhe-EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEE
Confidence 444 7889999999999999999999999999998754322 23445778899999999999999999999854 4568
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||+++++|.+++.....+++..+..++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||+++....
T Consensus 94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD--IIYRDLKPENLLLDNK-GHVKVTDFGFAKKVPD 170 (329)
T ss_pred EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEECCC-CCEEEeeccCceEcCC
Confidence 899999999999999888778999999999999999999999999 9999999999999865 6899999999987654
Q ss_pred cce---eeeecccCccccCCCccccccceeeecc
Q 027788 184 AIR---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 184 ~~~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
... ++..+.+| +......++.++|+||+|+
T Consensus 171 ~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~ 203 (329)
T PTZ00263 171 RTFTLCGTPEYLAP-EVIQSKGHGKAVDWWTMGV 203 (329)
T ss_pred CcceecCChhhcCH-HHHcCCCCCCcceeechHH
Confidence 321 12223333 3344555778899999993
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-32 Score=222.69 Aligned_cols=181 Identities=19% Similarity=0.290 Sum_probs=150.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|+++..... .......+..|+.++..++||||+++++.+. +.+.++++
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--~~~~~~lv 79 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--DDEYLYLA 79 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhCCCCCCccEEEEEE--cCCEEEEE
Confidence 37889999999999999999999999999998855322 2334567889999999999999999999885 44678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc-
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI- 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~- 185 (219)
|||+++++|.+++.....+++..+..++.|++.++.|||+.+ ++||||||+||+++.+ +.++|+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kL~Dfg~a~~~~~~~~ 156 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG--YIHRDLKPENFLIDAS-GHIKLTDFGLSKGIVTYAN 156 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEEEeCcCCcccccccC
Confidence 999999999999987778999999999999999999999999 9999999999999865 689999999998664421
Q ss_pred --eeeeecccCccccCCCccccccceeeecc
Q 027788 186 --RRIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 --~~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.++..+.+| +......++.++|+||+|+
T Consensus 157 ~~~gt~~y~aP-E~~~~~~~~~~~DvwslG~ 186 (333)
T cd05600 157 SVVGSPDYMAP-EVLRGKGYDFTVDYWSLGC 186 (333)
T ss_pred CcccCccccCh-hHhcCCCCCCccceecchH
Confidence 122233333 3444557888899999993
No 35
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.7e-32 Score=221.51 Aligned_cols=177 Identities=21% Similarity=0.306 Sum_probs=145.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||+|.+..+++.||+|+++..... .......+.+|+.++++++||||+++.+.+.. .+.++++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~ 77 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFVMEYA 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCC
Confidence 4699999999999999999999999998854322 23445678899999999999999999988844 45788999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivHrDlkp~NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 78 NGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEeeCCCCcccccCCCcccc
Confidence 99999998887788999999999999999999999999 9999999999999865 5899999999875432211
Q ss_pred --eeeecccCccccCCCccccccceeeecc
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~gt~~y~aP-E~~~~~~~~~~~DiwSlG~ 183 (323)
T cd05571 155 FCGTPEYLAP-EVLEDNDYGRAVDWWGLGV 183 (323)
T ss_pred eecCccccCh-hhhcCCCCCccccCcccch
Confidence 22233333 3445566788899999993
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=230.04 Aligned_cols=188 Identities=25% Similarity=0.439 Sum_probs=161.1
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
.++...|.++ ++||+|.||.||+|.+..+++.||+|++..... ....+.+..|+.++..++++||.++++.+...
T Consensus 9 ~~~~~~~~~~-~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIediqqei~~Ls~~~~~~it~yygsyl~g- 83 (467)
T KOG0201|consen 9 IDPELLYTKL-ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDIQQEISVLSQCDSPNITEYYGSYLKG- 83 (467)
T ss_pred CCcccccccc-hhccccccceeeeeeeccccceEEEEEechhhc---chhhHHHHHHHHHHHhcCcchHHhhhhheeec-
Confidence 4455666555 899999999999999999999999999998763 44567788999999999999999999988654
Q ss_pred CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
..++++||||.+|++.++++....+++..+..++++++.|+.|||.++ .+|||||+.|+++..+ |.+|++|||++.
T Consensus 84 -~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~--kiHrDIKaanil~s~~-g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 84 -TKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK--KIHRDIKAANILLSES-GDVKLADFGVAG 159 (467)
T ss_pred -ccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc--eecccccccceeEecc-CcEEEEecceee
Confidence 458999999999999999988877799999999999999999999999 9999999999999866 799999999999
Q ss_pred eccccce------eeeecccCccccCCCccccccceeeeccccc
Q 027788 180 IVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 180 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi~~~ 217 (219)
.+..... ++..|-+|+-.. ..+|+.+||||||||+|+
T Consensus 160 ql~~~~~rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITai 202 (467)
T KOG0201|consen 160 QLTNTVKRRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAI 202 (467)
T ss_pred eeechhhccccccccccccchhhhc-cccccchhhhhhhhHHHH
Confidence 8877654 333444443333 778999999999999875
No 37
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=225.03 Aligned_cols=185 Identities=26% Similarity=0.420 Sum_probs=149.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC------CHH----HHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD------DPA----MIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~------~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
|.+.+.||+|.||.|-+|++..+++.||+|++....... ... -.+..+.||.+++++.||||++++.+.-
T Consensus 99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLD 178 (576)
T KOG0585|consen 99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLD 178 (576)
T ss_pred eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeec
Confidence 477789999999999999999999999999998654321 122 2357889999999999999999999998
Q ss_pred cCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
+...+.+|+|+|||..|.+...-.....+++++.+.+++.++.||.|||.++ |+||||||+|+|++.+ |++||+|||
T Consensus 179 DP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg--iiHRDIKPsNLLl~~~-g~VKIsDFG 255 (576)
T KOG0585|consen 179 DPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG--IIHRDIKPSNLLLSSD-GTVKISDFG 255 (576)
T ss_pred CcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEEcCC-CcEEeeccc
Confidence 8888999999999998888653333333899999999999999999999999 9999999999999966 799999999
Q ss_pred cceecc------ccceeeeecccCccccC----C---Ccc-ccccceeeecc
Q 027788 177 VAAIVG------RAIRRIRCWGRRSSWRR----S---CTM-RITRSLWTYTR 214 (219)
Q Consensus 177 ~a~~~~------~~~~~~~~~~~~~~~~~----~---~~~-~~~~diws~gi 214 (219)
.+.... .+..-...+|+|..+++ . ..+ ..+.||||+||
T Consensus 256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 998762 22223336777664332 1 222 34489999994
No 38
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.6e-32 Score=224.72 Aligned_cols=148 Identities=16% Similarity=0.272 Sum_probs=129.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..+++.||+|++...... .....+.+.+|+.++++++|+||+++++.+.. .+.++++
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~lv 79 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL-MRNQAAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--CCEEEEE
Confidence 37779999999999999999999999999998743221 22345678899999999999999999999854 4678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
|||+++|+|.+++...+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+|..
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nill~~~-~~ikL~DFG~a~~ 150 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTG 150 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHEEECCC-CCEEEEeCCCCcc
Confidence 999999999999887778899999999999999999999999 9999999999999865 6899999999753
No 39
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-33 Score=231.52 Aligned_cols=180 Identities=21% Similarity=0.353 Sum_probs=155.7
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+-+.||+|.||+||+|+.+.+...||+|.+.+... ....++.+.+|+++++.++||||++++++| +....+|+|+
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~lkHpniv~m~esf--Et~~~~~vVt 80 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSLKHPNIVEMLESF--ETSAHLWVVT 80 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhcCCcchhhHHHhh--cccceEEEEe
Confidence 566899999999999999999999999999986543 456678899999999999999999999999 7778899999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
||+.| +|..++...+.++++.+..+..++++|+.|||+.+ |+|||+||.||++.+. +.+|++|||+|+.......
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r--ilhrd~kPqniLl~~~-~~~KlcdFg~Ar~m~~~t~v 156 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR--ILHRDMKPQNILLEKG-GTLKLCDFGLARAMSTNTSV 156 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC--cccccCCcceeeecCC-CceeechhhhhhhcccCcee
Confidence 99975 99999998899999999999999999999999999 9999999999999866 6899999999998765332
Q ss_pred eeeecccC----ccccCCCccccccceeeeccc
Q 027788 187 RIRCWGRR----SSWRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 187 ~~~~~~~~----~~~~~~~~~~~~~diws~gi~ 215 (219)
.++.-|+| ++...+.+|+..+|+||+|++
T Consensus 157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGci 189 (808)
T KOG0597|consen 157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCI 189 (808)
T ss_pred eeeccCcccccCHHHHcCCCccchhhHHHHHHH
Confidence 22223332 245568889999999999943
No 40
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5e-33 Score=221.50 Aligned_cols=180 Identities=20% Similarity=0.268 Sum_probs=149.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.+++.++||||+++++++ .+...++++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--~~~~~~~lv 79 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQEQHVHNEKRVLKEVSHPFIIRLFWTE--HDQRFLYML 79 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHHHHHHHHHHHHHhCCCCcHhhhHhhh--ccCCeEEEE
Confidence 36789999999999999999999999999998754321 233456788999999999999999998887 445678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|.+++...+.+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||++........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~NIli~~~-~~~kl~Dfg~~~~~~~~~~ 156 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE--IVYRDLKPENILLDKE-GHIKLTDFGFAKKLRDRTW 156 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEEecCcchhccCCcc
Confidence 999999999999888778999999999999999999999999 9999999999999855 6899999999987644321
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++||||+|
T Consensus 157 ~~~gt~~y~aP-E~~~~~~~~~~~DiwSlG 185 (291)
T cd05612 157 TLCGTPEYLAP-EVIQSKGHNKAVDWWALG 185 (291)
T ss_pred cccCChhhcCH-HHHcCCCCCchhhHHHHH
Confidence 22223333 344555677889999999
No 41
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-32 Score=224.48 Aligned_cols=148 Identities=18% Similarity=0.289 Sum_probs=130.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.+|+|.+...... .......+.+|+.++++++|+||+++++.+.. .+.++++
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-LRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 36679999999999999999999999999998754321 23455778899999999999999999999954 4568999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
|||+++|+|.+++.....+++..+..++.|++.|+.|||+.+ |+||||||+||+++.+ +.++|+|||++..
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~--ivHrDlKp~NILl~~~-g~~kL~DFGla~~ 150 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTG 150 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEEeECCCCcc
Confidence 999999999998887778899999999999999999999999 9999999999999865 6899999999753
No 42
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-33 Score=230.71 Aligned_cols=185 Identities=21% Similarity=0.330 Sum_probs=157.6
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
-|++++-||.|+.|.|-.|.+..||+..|||++...... .......+-+||.+++.+.|||+++++++| +++..+|+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s~~~~IerEIviMkLi~HpnVl~LydVw--e~~~~lyl 89 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSSQPAGIEREIVIMKLIEHPNVLRLYDVW--ENKQHLYL 89 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeecccccc-ccccccchhhhhHHHHHhcCCCeeeeeeee--ccCceEEE
Confidence 359999999999999999999999999999999876433 334456677899999999999999999999 67778999
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+.||+++|.|++++-.++++.+....+++.||+.|+.|+|..+ |+||||||+|++++.. +++||+|||+|..-..+.
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~--icHRDLKpENlLLd~~-~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN--ICHRDLKPENLLLDVK-NNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc--ceeccCCchhhhhhcc-cCEeeeccceeecccCCc
Confidence 9999999999999999999999999999999999999999999 9999999999999966 479999999998766655
Q ss_pred eeeeecccCc----cccCCCccc-cccceeeecccc
Q 027788 186 RRIRCWGRRS----SWRRSCTMR-ITRSLWTYTRLG 216 (219)
Q Consensus 186 ~~~~~~~~~~----~~~~~~~~~-~~~diws~gi~~ 216 (219)
--.+.+|+|- +..++..|. .++|+||-||.-
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVIL 202 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVIL 202 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHH
Confidence 4444445432 344555554 459999999543
No 43
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-32 Score=225.05 Aligned_cols=190 Identities=22% Similarity=0.382 Sum_probs=150.7
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCC----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEG----IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
...+.--.+.++||+|+||.||+|.....+ ..||+|..+.... ....+..++.+|+.++++++||||++++|+..
T Consensus 153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~-~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE-LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccccc-ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 344555567789999999999999865432 2389998775322 24567799999999999999999999999997
Q ss_pred cCCCceEEEEeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
.+.+ ++++||+|+||+|.++++..+ .++..+...++.+.+.||+|||..+ ++||||..+|+|++.+ +.+||+||
T Consensus 232 ~~~P--l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~--~IHRDIAARNcL~~~~-~~vKISDF 306 (474)
T KOG0194|consen 232 LEEP--LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN--CIHRDIAARNCLYSKK-GVVKISDF 306 (474)
T ss_pred CCCc--cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC--CcchhHhHHHheecCC-CeEEeCcc
Confidence 6654 788999999999999998876 4999999999999999999999999 9999999999999865 36799999
Q ss_pred ccceeccccceee------eecccCccccCCCccccccceeeec--cccc
Q 027788 176 GVAAIVGRAIRRI------RCWGRRSSWRRSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 176 g~a~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~diws~g--i~~~ 217 (219)
|+++.-....... ..|-+|+-+. ...|+.++|+|||| +|++
T Consensus 307 GLs~~~~~~~~~~~~~klPirWLAPEtl~-~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 307 GLSRAGSQYVMKKFLKKLPIRWLAPETLN-TGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ccccCCcceeeccccccCcceecChhhhc-cCccccccchhheeeeEEee
Confidence 9987654222222 2233333333 33788999999999 5554
No 44
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-32 Score=220.26 Aligned_cols=185 Identities=25% Similarity=0.380 Sum_probs=158.3
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCc
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRN 101 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~ 101 (219)
....|.+.+.||+|.||.||.|+.+.+|..+|+|.++++..... .....+.+|+.++++++ ||||+.+.++| +...
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v~~Ev~il~~l~~hpniv~l~~~~--e~~~ 109 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDVRREVAILQQLSGHPNIVQLKDAF--EDPD 109 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHHHHHHHHHHhccCCCCEEEEEEEE--EcCC
Confidence 34455898999999999999999999999999999987765332 24467889999999999 99999999999 5556
Q ss_pred eEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC---CcEEEeccccc
Q 027788 102 TLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT---GQVKIGDLGVA 178 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~---~~~~l~dfg~a 178 (219)
.+++|||++.||.|.+.+... .+++.....++.|++.++.|||+.+ ++||||||+|+++.... +.++++|||++
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~g--vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLG--VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCC--ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 799999999999999988665 4999999999999999999999999 99999999999986332 37999999999
Q ss_pred eeccccceeeeecccCcc----ccCCCccccccceeeec
Q 027788 179 AIVGRAIRRIRCWGRRSS----WRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~diws~g 213 (219)
............+|+|.. .....+|+...|+||+|
T Consensus 187 ~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~G 225 (382)
T KOG0032|consen 187 KFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIG 225 (382)
T ss_pred eEccCCceEeeecCCccccCchhhcCCCCCcccchhHHH
Confidence 999886566666777653 33457788899999999
No 45
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.6e-32 Score=221.13 Aligned_cols=150 Identities=19% Similarity=0.335 Sum_probs=131.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..+++.||+|+++..... .......+..|+.++..++|++++++++.+. +...++++
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~~~~~lv 79 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-EKEQVAHIRAERDILVEADGAWVVKMFYSFQ--DKRNLYLI 79 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEEEE
Confidence 36779999999999999999999999999998753321 2334577889999999999999999999885 44678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+++|+|.+++.....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.+ +.++|+|||++....
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g--ivHrDLkp~NIli~~~-~~vkL~DfG~~~~~~ 152 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG--FIHRDIKPDNLLLDAK-GHVKLSDFGLCTGLK 152 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEeeccCCcccc
Confidence 999999999999887778999999999999999999999999 9999999999999865 689999999987653
No 46
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.5e-32 Score=223.04 Aligned_cols=190 Identities=23% Similarity=0.351 Sum_probs=161.6
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
..-..|.+.+.||+|.|+.|..|++..++..||+|.+++... +...++.+.+|+.+++.|+||||++++.+... +.
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l--n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t--~~ 128 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL--NPSKRQKLGREVDIMKSLNHPNIVKLFSVIET--EA 128 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc--ChHHHHHHHHHHHHHHhcCCcceeeeeeeeee--cc
Confidence 445556999999999999999999999999999999986654 34445568899999999999999999999844 45
Q ss_pred eEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 102 TLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.+|+||||+.+|.+++++..++...+......+.|+..+++|||++. ++|||||++|++++.+. ++||+|||++..+
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~--ivHrdLk~eNilL~~~m-nikIaDfgfS~~~ 205 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN--IVHRDLKAENILLDENM-NIKIADFGFSTFF 205 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc--eeccccchhhccccccc-ceeeeccccceee
Confidence 69999999999999999999988888999999999999999999999 99999999999999775 7999999999998
Q ss_pred cccceeeeecccCc----cccCCCccccc-cceeeec--ccccc
Q 027788 182 GRAIRRIRCWGRRS----SWRRSCTMRIT-RSLWTYT--RLGCA 218 (219)
Q Consensus 182 ~~~~~~~~~~~~~~----~~~~~~~~~~~-~diws~g--i~~~~ 218 (219)
.....-.+.+|+|+ +.....+|..+ .|+||+| ++++-
T Consensus 206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV 249 (596)
T KOG0586|consen 206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALV 249 (596)
T ss_pred cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeee
Confidence 87776666777655 34444445544 9999999 55543
No 47
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.5e-32 Score=219.19 Aligned_cols=183 Identities=18% Similarity=0.300 Sum_probs=148.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCC-cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEG-IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.+| .+.+.||+|+||.||+|.+..++ ..||+|.+...... .....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 30 ~~y-~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~ 105 (340)
T PTZ00426 30 EDF-NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-KQKQVDHVFSERKILNYINHPFCVNLYGSFKD--ESY 105 (340)
T ss_pred hhc-EEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe--CCE
Confidence 445 78899999999999999876554 68999998754322 23445778899999999999999999999854 456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|||+++|+|.+++.....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.+ +.++|+|||++....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN--IVYRDLKPENLLLDKD-GFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEccCCCHHHEEECCC-CCEEEecCCCCeecC
Confidence 8899999999999999988788999999999999999999999999 9999999999999855 689999999998764
Q ss_pred ccce---eeeecccCccccCCCccccccceeeecc
Q 027788 183 RAIR---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... ++..+.+| +......++.++|+||+|+
T Consensus 183 ~~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwSlGv 216 (340)
T PTZ00426 183 TRTYTLCGTPEYIAP-EILLNVGHGKAADWWTLGI 216 (340)
T ss_pred CCcceecCChhhcCH-HHHhCCCCCccccccchhh
Confidence 4221 22223333 3334455677899999994
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.3e-32 Score=217.68 Aligned_cols=177 Identities=21% Similarity=0.321 Sum_probs=144.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||++.+..+++.||+|++...... .......+.+|+.+++.++||||+++.+.+. ..+.++++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv~Ey~ 77 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVII-AKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--TKDRLCFVMEYV 77 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--cCCEEEEEEeCC
Confidence 4689999999999999999999999998854332 2344577889999999999999999998885 445688999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++++|...+.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 78 NGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK--IVYRDLKLENLMLDKD-GHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeEECCC-CcEEEecCcCCccCCCccccccc
Confidence 99999988887778999999999999999999999999 9999999999999865 6899999999876432221
Q ss_pred --eeeecccCccccCCCccccccceeeecc
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~gt~~y~aP-E~~~~~~~~~~~DiwslGv 183 (328)
T cd05593 155 FCGTPEYLAP-EVLEDNDYGRAVDWWGLGV 183 (328)
T ss_pred ccCCcCccCh-hhhcCCCCCccCCccccch
Confidence 12223333 3344556778899999993
No 49
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1e-31 Score=220.65 Aligned_cols=183 Identities=15% Similarity=0.203 Sum_probs=146.8
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
..|++.+.||+|+||.||++.+..+++.+|+|++...... .....+.+..|+.+++.++||||+++++.+. +...++
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~--~~~~~~ 119 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFCAFQ--DDKYLY 119 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEE
Confidence 3347889999999999999999999999999998753321 2233456788999999999999999999884 456789
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
++|||+++|+|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~--IvHrDLKp~NILl~~~-~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKH-GHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEEecccceecccC
Confidence 999999999999988654 5889999999999999999999999 9999999999999855 68999999999876433
Q ss_pred ce-------eeeecccCccccCC---Cccccccceeeecc
Q 027788 185 IR-------RIRCWGRRSSWRRS---CTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~-------~~~~~~~~~~~~~~---~~~~~~~diws~gi 214 (219)
.. ++..+.+|+.+... ..++.++|+||+|+
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ 235 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehH
Confidence 21 22233344433222 23667899999993
No 50
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.6e-31 Score=216.05 Aligned_cols=176 Identities=21% Similarity=0.318 Sum_probs=144.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||++.+..+++.||+|+++..... .......+..|+.+++.++||||+++.+.+.. ...++++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 77 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYA 77 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCC
Confidence 4699999999999999999999999999864432 23345677889999999999999999988844 45688999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
++++|..++.....+++..+..++.|++.||.|||+ .+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~--ivHrDikp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 78 NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKD-GHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCCCCeEEECCC-CCEEEecCCCCeecCCCCcccc
Confidence 999999988877789999999999999999999997 68 9999999999999865 5899999999876432221
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG 183 (325)
T cd05594 155 TFCGTPEYLAP-EVLEDNDYGRAVDWWGLG 183 (325)
T ss_pred cccCCcccCCH-HHHccCCCCCcccccccc
Confidence 22223333 344556678889999999
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.6e-32 Score=216.42 Aligned_cols=175 Identities=15% Similarity=0.264 Sum_probs=144.1
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|+||.||+|.+..+++.||+|.++..... .......+..|+.++++++||||+++++.+.. .+.++++|||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 77 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFING 77 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCC
Confidence 69999999999999999999999998754322 23445778899999999999999999988854 4668899999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce------
Q 027788 113 GNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR------ 186 (219)
Q Consensus 113 g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~------ 186 (219)
++|.+++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~HrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 78 GELFHHLQREGRFDLSRARFYTAELLCALENLHKFN--VIYRDLKPENILLDYQ-GHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHeEECCC-CcEEEEECcccccCccCCCcccccc
Confidence 999999887778999999999999999999999999 9999999999999865 5899999999976432221
Q ss_pred eeeecccCccccCCCccccccceeeecc
Q 027788 187 RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 gt~~y~aP-E~~~~~~~~~~~DvwslGv 181 (312)
T cd05585 155 GTPEYLAP-ELLLGHGYTKAVDWWTLGV 181 (312)
T ss_pred CCcccCCH-HHHcCCCCCCccceechhH
Confidence 22223333 3444566788899999993
No 52
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-31 Score=217.30 Aligned_cols=183 Identities=17% Similarity=0.286 Sum_probs=146.7
Q ss_pred eeeeeeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 102 (219)
|++.+.||+|+||.||+++.. .++..||+|++............+.+..|+.+++.+ +|++|+++++++. ..+.
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~--~~~~ 79 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ--TEAK 79 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe--cCCE
Confidence 367899999999999998763 578999999987544333344557788999999999 4899999998884 4456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|||+++++|.+++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++....
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~DfG~~~~~~ 156 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG--IVYRDIKLENILLDSE-GHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHeEECCC-CCEEEeeCcCCcccc
Confidence 8899999999999998877778999999999999999999999999 9999999999999866 589999999998653
Q ss_pred ccce-------eeeecccCccccCCCccccccceeeecc
Q 027788 183 RAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... ++..+.+|+.......++.++||||+|+
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 195 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI 195 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchh
Confidence 3221 2222334443433344677899999993
No 53
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.7e-32 Score=218.07 Aligned_cols=177 Identities=19% Similarity=0.305 Sum_probs=145.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||++.+..++..||+|.++..... .......+.+|+.+++.++||||+++++.+.. ...++++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~ 77 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYA 77 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCC
Confidence 4699999999999999999999999998865332 23345677889999999999999999998854 45688999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 78 NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKD-GHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEEcCC-CCEEecccHHhccccCCCCcccc
Confidence 99999988887778999999999999999999999999 9999999999999865 5899999999876432221
Q ss_pred --eeeecccCccccCCCccccccceeeecc
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~gt~~y~aP-E~~~~~~~~~~~DiwSlGv 183 (323)
T cd05595 155 FCGTPEYLAP-EVLEDNDYGRAVDWWGLGV 183 (323)
T ss_pred ccCCcCcCCc-ccccCCCCCchhchhhhHH
Confidence 22233333 3444556778899999993
No 54
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-33 Score=224.48 Aligned_cols=183 Identities=24% Similarity=0.428 Sum_probs=156.5
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.+|+|+||.++...++.++..+++|.+...... .........|+.++++++||||+.+.+.|.. +..++
T Consensus 4 ~~Y-e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t--~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~-~~~~l 79 (426)
T KOG0589|consen 4 DNY-EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT--EPERRSAIQEMDLLSKLLHPNIVEYKDSFEE-DGQLL 79 (426)
T ss_pred chh-hhhhhcCccccchhhhhhhccCCceEEEEEEeccccC--chhhHHHHHHHHHHHhccCCCeeeeccchhc-CCceE
Confidence 345 5568999999999999999999999999999877653 3333467789999999999999999999964 33568
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++|+||+||++.+.+... ..++++.+..++.|++.|+.|||++. |+|||||+.||+++++. .++|.|||+|+.+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~--iLHRDlK~~Nifltk~~-~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR--VLHRDLKCANIFLTKDK-KVKLGDFGLAKIL 156 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh--hhcccchhhhhhccccC-ceeecchhhhhhc
Confidence 9999999999999988654 35899999999999999999999888 99999999999999775 7899999999999
Q ss_pred cccc-eeeeecccCc----cccCCCccccccceeeec
Q 027788 182 GRAI-RRIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~-~~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
..+. ...+..|+|. +.+..-+|+.++||||||
T Consensus 157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLG 193 (426)
T KOG0589|consen 157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLG 193 (426)
T ss_pred CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhc
Confidence 8887 3444555544 466788899999999999
No 55
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.98 E-value=2.3e-31 Score=211.25 Aligned_cols=181 Identities=17% Similarity=0.271 Sum_probs=145.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..+++.||+|.+...... .......+.+|+.++++++|++++++.+.+. ..+.++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~--~~~~~~lv 78 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKRILEKVNSRFVVSLAYAYE--TKDALCLV 78 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc--cCCeEEEE
Confidence 46778999999999999999999999999998754332 1223355778999999999999999998884 44568899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++|+|...+... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nill~~~-~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER--IVYRDLKPENILLDDR-GHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeCCCcEEcCCC
Confidence 9999999998776532 35889999999999999999999999 9999999999999855 58999999999876443
Q ss_pred cee-----eeecccCccccCCCccccccceeeecc
Q 027788 185 IRR-----IRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~~-----~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
... +..+.+ ++......++.++|+||+|+
T Consensus 156 ~~~~~~~g~~~y~a-PE~~~~~~~~~~~DvwslGv 189 (285)
T cd05631 156 ETVRGRVGTVGYMA-PEVINNEKYTFSPDWWGLGC 189 (285)
T ss_pred CeecCCCCCCCccC-HhhhcCCCCCcccCchhHHH
Confidence 321 112223 34455667888899999993
No 56
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.98 E-value=2e-31 Score=215.86 Aligned_cols=182 Identities=17% Similarity=0.252 Sum_probs=148.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.+|+|.++..... .....+.+..|+.+++.++|+||+++++.+. +.+.++++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--~~~~~~lv 79 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-AQETVSFFEEERDILSISNSPWIPQLQYAFQ--DKDNLYLV 79 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCCcceeeEEe--cCCeEEEE
Confidence 47889999999999999999999999999999864321 2334567889999999999999999998884 44678899
Q ss_pred eccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++++|.++++.. ..+++..+..++.|++.+|.|||+.+ ++||||||+||+++.+ +.++|+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--i~H~Dlkp~NIll~~~-~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG--YVHRDIKPENVLIDRT-GHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEcccCchHheEECCC-CCEEeccCCCCeECCCCC
Confidence 9999999999998765 67999999999999999999999999 9999999999999855 689999999998765433
Q ss_pred e-------eeeecccCccccC-----CCccccccceeeecc
Q 027788 186 R-------RIRCWGRRSSWRR-----SCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~~-----~~~~~~~~diws~gi 214 (219)
. ++..+.+|+-... ...++.++|+||+|+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~ 197 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGV 197 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccc
Confidence 2 1222333433221 445677899999993
No 57
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=8.5e-32 Score=219.47 Aligned_cols=152 Identities=20% Similarity=0.371 Sum_probs=133.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|+++..... .......+..|+.+++.++|+|++++++.+. +.+.++++
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~lv 79 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-KRNQIAHVRAERDILADADSPWIVKLYYSFQ--DEEHLYLV 79 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhcCCCCccchhhhee--cCCeEEEE
Confidence 37789999999999999999999999999998854322 2234567889999999999999999998884 45678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--iiH~Dlkp~NIll~~~-~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG--FIHRDIKPDNILIDAD-GHIKLADFGLCKKMNKA 154 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEeecCCCCccCccc
Confidence 999999999999887778999999999999999999999999 9999999999999866 58999999999876544
No 58
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.98 E-value=8.4e-32 Score=215.55 Aligned_cols=181 Identities=25% Similarity=0.395 Sum_probs=144.0
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|.+..+++.||+|.++.... ......+.+|+.+++.++||||+++++++.. ....
T Consensus 5 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 78 (303)
T cd07869 5 DSY-EKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE---EGTPFTAIREASLLKGLKHANIVLLHDIIHT--KETL 78 (303)
T ss_pred ccc-eEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc---cccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeE
Confidence 445 777999999999999999999999999999875432 1222456789999999999999999999854 4568
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++|||++ ++|.+++... ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.+||+|||++....
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY--ILHRDLKPQNLLISDT-GELKLADFGLARAKS 154 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECCCCcceecc
Confidence 89999996 5777766543 56889999999999999999999999 9999999999999855 689999999987653
Q ss_pred ccce------eeeecccCccccCCCccccccceeeecc
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... .+..+.+|+.+.....++.++|+||+|+
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 192 (303)
T cd07869 155 VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGC 192 (303)
T ss_pred CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHH
Confidence 3221 1222344444455566777899999993
No 59
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.98 E-value=1.5e-31 Score=212.72 Aligned_cols=180 Identities=24% Similarity=0.392 Sum_probs=144.8
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|++..++..||+|.++.... ......+.+|+.++++++||||+++++++.. .+.+
T Consensus 5 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 78 (288)
T cd07871 5 ETY-VKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCL 78 (288)
T ss_pred ccc-eEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc---CCcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeE
Confidence 345 667999999999999999999999999999875432 2223557789999999999999999999854 4568
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++||+++ ++|.+++... ..++...+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||+++...
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~DfG~~~~~~ 154 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK--ILHRDLKPQNLLINEK-GELKLADFGLARAKS 154 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEECcCcceeecc
Confidence 89999997 5888877654 34788999999999999999999999 9999999999999865 589999999997654
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .+..+.+|+.+.....++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 191 (288)
T cd07871 155 VPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVG 191 (288)
T ss_pred CCCccccCceecccccChHHhcCCcccCcHHHHHHHH
Confidence 3221 223344454455556678889999999
No 60
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.98 E-value=3.8e-31 Score=217.40 Aligned_cols=185 Identities=15% Similarity=0.215 Sum_probs=147.8
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
..+-|.+.+.||+|+||.||+|.+..+++.+|+|++...... .....+.+..|+.+++.++||||+++++.+. +...
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~--~~~~ 117 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAFFWEERDIMAFANSPWVVQLFYAFQ--DDRY 117 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--cCCE
Confidence 334457889999999999999999999999999998753321 2233456788999999999999999999885 4467
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|||+++++|.+++... .+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NIll~~~-~~ikL~DfG~a~~~~ 193 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHEEECCC-CCEEEEeCCceeEcC
Confidence 89999999999999988654 5888999999999999999999999 9999999999999865 689999999998765
Q ss_pred ccce-------eeeecccCccccCC---Cccccccceeeecc
Q 027788 183 RAIR-------RIRCWGRRSSWRRS---CTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~-------~~~~~~~~~~~~~~---~~~~~~~diws~gi 214 (219)
.... ++..+.+|+.+... ..++.++|+||+|+
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGv 235 (371)
T cd05622 194 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (371)
T ss_pred cCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhH
Confidence 4321 22233344433222 23677899999993
No 61
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=2.9e-31 Score=214.35 Aligned_cols=177 Identities=20% Similarity=0.327 Sum_probs=140.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH-HHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR-LLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.||+|++....... .....++..|.. +++.++||||+++++.+.. .+.++++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~ 77 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDY 77 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcC
Confidence 46999999999999999999999999987543321 222345555555 5678999999999988844 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--ivH~dikp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeccCCCcccccCCCccc
Confidence 999999998887778999999999999999999999999 9999999999999865 6899999999875432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DvwslG~ 184 (323)
T cd05575 155 TFCGTPEYLAP-EVLRKQPYDRTVDWWCLGA 184 (323)
T ss_pred cccCChhhcCh-hhhcCCCCCccccccccch
Confidence 12223333 3445566788899999993
No 62
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.98 E-value=1.6e-31 Score=216.94 Aligned_cols=181 Identities=24% Similarity=0.366 Sum_probs=141.5
Q ss_pred ceeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDE 98 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 98 (219)
+.+++.+.||+|+||.||+|.+ ..++..||+|.++... .....+.+.+|+.+++.+ +||||+++++.+...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA---TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc---chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3448899999999999999974 2445689999987432 234456788999999999 899999999988543
Q ss_pred CCceEEEEeccccCCChHHHHHhC--------------------------------------------------------
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH-------------------------------------------------------- 122 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~-------------------------------------------------------- 122 (219)
...++++|||+++|+|.+++...
T Consensus 84 -~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 84 -NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 34578899999999999887642
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee--------e
Q 027788 123 ------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR--------I 188 (219)
Q Consensus 123 ------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~--------~ 188 (219)
..+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||+++........ +
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDiKp~Nil~~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCccceEEEcCC-CcEEEeecccccccccCcchhcccCCCCC
Confidence 23667788899999999999999999 9999999999999865 58999999999876432210 1
Q ss_pred eecccCccccCCCccccccceeeec
Q 027788 189 RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..+.+| +......++.++||||+|
T Consensus 240 ~~y~aP-E~~~~~~~~~~sDiwslG 263 (338)
T cd05102 240 LKWMAP-ESIFDKVYTTQSDVWSFG 263 (338)
T ss_pred ccccCc-HHhhcCCCCcccCHHHHH
Confidence 123333 333455678889999999
No 63
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.98 E-value=4e-31 Score=214.08 Aligned_cols=176 Identities=21% Similarity=0.306 Sum_probs=144.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.||+|+++..... .....+.+..|..+++.+ +||||+++++++.. .+.++++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~lv~e~ 77 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFFVIEF 77 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEEEEeC
Confidence 4689999999999999999999999999864432 334456788899999888 69999999998854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEECcCccccccccCCCccc
Confidence 999999988877778999999999999999999999999 9999999999999865 5899999999875322111
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG 183 (329)
T cd05588 155 TFCGTPNYIAP-EILRGEDYGFSVDWWALG 183 (329)
T ss_pred cccCCccccCH-HHHcCCCCCCccceechH
Confidence 12223333 344556677889999999
No 64
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=3.9e-31 Score=217.30 Aligned_cols=183 Identities=15% Similarity=0.247 Sum_probs=145.9
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|.+..++..+|+|.++..... .....+.+..|+.+++.++||||+++++++. +.+.+
T Consensus 43 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~--~~~~~ 118 (370)
T cd05596 43 EDF-DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-KRSDSAFFWEERDIMAHANSEWIVQLHYAFQ--DDKYL 118 (370)
T ss_pred HHc-EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--cCCEE
Confidence 344 7779999999999999999999999999998743221 2233455778999999999999999998884 45678
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||+++|+|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~-~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKS-GHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEcCC-CCEEEEeccceeeccC
Confidence 9999999999999987653 5888999999999999999999999 9999999999999865 6899999999987643
Q ss_pred cce-------eeeecccCccccCC---Cccccccceeeecc
Q 027788 184 AIR-------RIRCWGRRSSWRRS---CTMRITRSLWTYTR 214 (219)
Q Consensus 184 ~~~-------~~~~~~~~~~~~~~---~~~~~~~diws~gi 214 (219)
... ++..+.+|+.+... ..++.++|+||+|+
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGv 235 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhH
Confidence 321 22223334333322 23677899999993
No 65
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.98 E-value=5e-31 Score=213.67 Aligned_cols=182 Identities=16% Similarity=0.213 Sum_probs=146.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++.+..+++.||+|.+...... .......+..|+.++..++|++|+++++.+. +.+.++++
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--~~~~~~lv 79 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAETACFREERNVLVNGDCQWITTLHYAFQ--DENYLYLV 79 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEEEE
Confidence 47889999999999999999999999999998753221 2333456788999999999999999999884 44678999
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++|+|.+++.. ...+++..+..++.|++.+|.|||+.+ ++||||||+||+++.+ +.++|+|||++.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~--iiHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH--YVHRDIKPDNVLLDMN-GHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCchHHEEEcCC-CCEEEEeccceeeccCCC
Confidence 999999999999876 457899999999999999999999999 9999999999999855 589999999998765433
Q ss_pred e-------eeeecccCccccCC----Cccccccceeeecc
Q 027788 186 R-------RIRCWGRRSSWRRS----CTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~~~----~~~~~~~diws~gi 214 (219)
. ++..+.+|+.+... ..++.++|+||+|+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGv 196 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 196 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeeh
Confidence 2 11223333332221 34667899999993
No 66
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=3.1e-31 Score=214.18 Aligned_cols=177 Identities=19% Similarity=0.245 Sum_probs=142.8
Q ss_pred eeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|+||.||++... .+++.||+|.++.............+.+|+.+++.++||||+++++.+.. .+.++++|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeEEEEE
Confidence 67999999999999863 57889999998854432233445667899999999999999999998854 45688999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
||+++++|.+.+.....+.+..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG--IIYRDLKPENILLDAQ-GHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEeeCcCCeecccCCCc
Confidence 99999999999887778899999999999999999999999 9999999999999865 6899999999875432221
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+|+ ......++.++|+||+|
T Consensus 157 ~~~~~gt~~y~aPE-~~~~~~~~~~~DiwslG 187 (323)
T cd05584 157 THTFCGTIEYMAPE-ILMRSGHGKAVDWWSLG 187 (323)
T ss_pred ccccCCCccccChh-hccCCCCCCcceecccH
Confidence 222233333 33445567789999999
No 67
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=4e-31 Score=214.22 Aligned_cols=182 Identities=16% Similarity=0.229 Sum_probs=146.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++.+..+++.||+|+++..... .....+.+..|+.+++.++|+||+++++++. +...++++
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~lv 79 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-KRAETACFREERDVLVNGDRRWITNLHYAFQ--DENNLYLV 79 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHhCCCCCCCceEEEEe--cCCeEEEE
Confidence 36789999999999999999999999999998743221 2334466888999999999999999999885 44678999
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++++|.+++.. ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG--YVHRDIKPDNVLLDKN-GHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEECCCCHHHEEECCC-CCEEEEECCceeecCCCC
Confidence 999999999998875 457899999999999999999999999 9999999999999855 689999999997764432
Q ss_pred e-------eeeecccCccccC----CCccccccceeeecc
Q 027788 186 R-------RIRCWGRRSSWRR----SCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~~----~~~~~~~~diws~gi 214 (219)
. ++..+.+|+.+.. ...++.++|+||+|+
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 196 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhh
Confidence 2 2222333433321 234567799999994
No 68
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=3.5e-31 Score=213.66 Aligned_cols=177 Identities=20% Similarity=0.318 Sum_probs=140.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH-HHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR-LLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|++..+++.+|+|++....... ......+..|.. +++.++||||+++++.+. +.+.++++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~--~~~~~~lv~e~ 77 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK-KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ--TAEKLYFVLDY 77 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hhHHHHHHHHHHHHHHhCCCCCccceeeEEE--cCCEEEEEEcC
Confidence 46999999999999999999999999987543321 222344555554 678899999999998884 44568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|...+.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 78 VNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN--IIYRDLKPENILLDSQ-GHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEccCCCCccCCCCCCccc
Confidence 999999988877778999999999999999999999999 9999999999999865 6899999999875422221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+|+ ......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aPE-~~~~~~~~~~~DiwslG~ 184 (321)
T cd05603 155 TFCGTPEYLAPE-VLRKEPYDRTVDWWCLGA 184 (321)
T ss_pred cccCCcccCCHH-HhcCCCCCCcCcccccch
Confidence 122233333 344556788899999993
No 69
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=4.2e-31 Score=213.55 Aligned_cols=177 Identities=20% Similarity=0.314 Sum_probs=140.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH-HHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR-LLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.+|+|++...... .......+..|.. +++.++||||+++++.+.. .+.++++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~ 77 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDF 77 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcC
Confidence 4699999999999999999999999998754322 2233345556655 4678999999999988844 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|...+.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g--ivH~Dlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN--IVYRDLKPENILLDSQ-GHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEEeecCCcccCCCCCCCcc
Confidence 999999988887778999999999999999999999999 9999999999999865 6899999999875432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+ ++......++.++|+||+|+
T Consensus 155 ~~~gt~~y~a-PE~~~~~~~~~~~DvwslG~ 184 (325)
T cd05604 155 TFCGTPEYLA-PEVIRKQPYDNTVDWWCLGA 184 (325)
T ss_pred cccCChhhCC-HHHHcCCCCCCcCccccccc
Confidence 1112222 34445566788899999993
No 70
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=5.4e-31 Score=213.30 Aligned_cols=177 Identities=21% Similarity=0.299 Sum_probs=144.3
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.+|+|+++..... .....+.+..|+.++.++ +||||+++++++.. .+.++++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~ 77 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEY 77 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeC
Confidence 4699999999999999999999999999865332 344456778899988776 79999999998854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dikp~Nili~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSE-GHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CCEEEeeCCccccccCCCCccc
Confidence 999999988887778999999999999999999999999 9999999999999866 5899999999875432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG~ 184 (329)
T cd05618 155 TFCGTPNYIAP-EILRGEDYGFSVDWWALGV 184 (329)
T ss_pred cccCCccccCH-HHHcCCCCCCccceecccH
Confidence 22223333 3445566788899999993
No 71
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=3.6e-31 Score=213.94 Aligned_cols=176 Identities=19% Similarity=0.290 Sum_probs=139.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH-HHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR-LLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.+|+|++....... ......+..|.. +++.++|+||+++++.+.. .+.++++|||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~ 77 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDY 77 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeC
Confidence 46999999999999999999999999987543221 122234444444 5678999999999998854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|.+++.....+.+..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g--iiHrDlkp~Nili~~~-~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 78 INGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQ-GHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEEccCCCCcccccCCCCcc
Confidence 999999998887778899999999999999999999999 9999999999999865 5899999999876432221
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG 183 (325)
T cd05602 155 TFCGTPEYLAP-EVLHKQPYDRTVDWWCLG 183 (325)
T ss_pred cccCCccccCH-HHHcCCCCCCcccccccc
Confidence 12222333 344556678889999999
No 72
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=5.7e-31 Score=212.69 Aligned_cols=181 Identities=20% Similarity=0.235 Sum_probs=144.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC-CceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK-NIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|+||.||+|.+..+++.||+|++...... .....+.+..|+.+++.++|+ +++++++++.. .+.+++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 36789999999999999999999999999998854322 233456788899999999875 47777777744 456889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+|||+++++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++.......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDAE-GHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEEcCC-CCEEEeecCcceecCCCC
Confidence 9999999999998887778999999999999999999999999 9999999999999865 689999999987543221
Q ss_pred e------eeeecccCccccCCCccccccceeeecc
Q 027788 186 R------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. ++..+.+ ++......++.++|+||+|+
T Consensus 156 ~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwslGv 189 (324)
T cd05587 156 KTTRTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGV 189 (324)
T ss_pred CceeeecCCccccC-hhhhcCCCCCcccchhhhHH
Confidence 1 1122222 34445556778899999993
No 73
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=221.75 Aligned_cols=184 Identities=21% Similarity=0.274 Sum_probs=157.7
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCce
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~ 102 (219)
-.-+++.++||+|+||+|++|..+.+++.+|||++++.....+ +.++..+.|..++.... ||.++.++.+|+++ +.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~-d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~--~~ 443 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQR-DEVESLMCEKRIFELANRHPFLVNLFSCFQTK--EH 443 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecc-ccHHHHHHHHHHHHHhccCCeEeecccccccC--Ce
Confidence 3456888999999999999999999999999999998776643 44677888999888775 99999999999654 66
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|+||||+.||++.. ++....+++..+..++..|+.||.|||+++ |++||||.+|||+|.+ |.+||+|||+++...
T Consensus 444 l~fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~--IIYRDlKLdNiLLD~e-Gh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENG--IIYRDLKLDNLLLDTE-GHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcC--ceeeecchhheEEccc-CcEEecccccccccC
Confidence 999999999999544 444568999999999999999999999999 9999999999999976 699999999999876
Q ss_pred -ccceeeeecccCc----cccCCCccccccceeeecc
Q 027788 183 -RAIRRIRCWGRRS----SWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 -~~~~~~~~~~~~~----~~~~~~~~~~~~diws~gi 214 (219)
.+....+.+|+|+ +......|+..-|=||||+
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGV 556 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGV 556 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHH
Confidence 3334556688877 3567888999999999994
No 74
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.3e-33 Score=205.09 Aligned_cols=183 Identities=22% Similarity=0.302 Sum_probs=156.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+++.||+|-||.||.|+.++++--||+|++.++... .......+.+|+++...|+||||++++++|.++ ..+|++
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~-~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~--~riyLi 100 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQIL-KTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS--KRIYLI 100 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHH-HhcchhhhhheeEeecccCCccHHhhhhheecc--ceeEEE
Confidence 47889999999999999999999999999998765432 233346688999999999999999999999654 568999
Q ss_pred eccccCCChHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRK--KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~--~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||.++|++...++ ....+++.....+..|++.|+.|+|..+ ++|||+||+|+|++.+ +.+|++|||.+..-+..
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~--VIhRdiKpenlLlg~~-~~lkiAdfGwsV~~p~~ 177 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR--VIHRDIKPENLLLGSA-GELKIADFGWSVHAPSN 177 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC--cccCCCCHHHhccCCC-CCeeccCCCceeecCCC
Confidence 99999999999888 5567999999999999999999999999 9999999999999866 58999999999877643
Q ss_pred ceeeeeccc----CccccCCCccccccceeeecccc
Q 027788 185 IRRIRCWGR----RSSWRRSCTMRITRSLWTYTRLG 216 (219)
Q Consensus 185 ~~~~~~~~~----~~~~~~~~~~~~~~diws~gi~~ 216 (219)
.+.+.+|+ |++.-.+.+++..-|+|++||.+
T Consensus 178 -kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~ 212 (281)
T KOG0580|consen 178 -KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLC 212 (281)
T ss_pred -CceeeecccccCCHhhcCCCCccchhhHHHHHHHH
Confidence 34444444 56778888999999999999653
No 75
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1e-30 Score=217.14 Aligned_cols=188 Identities=24% Similarity=0.371 Sum_probs=150.8
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-C-----CCceEE
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-N-----KNIISL 91 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~-----~~i~~~ 91 (219)
+..|-....|.+.+.||+|+||.|.+|++.++++.||||+++.. ......-..|+.+|..|+ | -|++++
T Consensus 179 v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm 253 (586)
T KOG0667|consen 179 VVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-----KRFLRQAQIEIRILELLNKHDPDDKYNIVRM 253 (586)
T ss_pred EecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEe
Confidence 33333333446789999999999999999999999999999854 455566778999999997 3 489999
Q ss_pred EEEEecCCCceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe-CCCC
Q 027788 92 HYVWRDEDRNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN-GNTG 168 (219)
Q Consensus 92 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~-~~~~ 168 (219)
+++|... +.+|||.|.+. .+|.+++..+ ..++...++.++.||+.+|.+||..+ |+|+||||+|||+. .+..
T Consensus 254 ~d~F~fr--~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~--IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 254 LDYFYFR--NHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG--IIHCDLKPENILLKDPKRS 328 (586)
T ss_pred eeccccc--cceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCChhheeeccCCcC
Confidence 9999654 56899999995 6999998754 46899999999999999999999999 99999999999985 3334
Q ss_pred cEEEeccccceeccccce---eeeecccCccccCCCccccccceeeec-ccc
Q 027788 169 QVKIGDLGVAAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
.+||+|||.|.......- +.+.+++| +....-+|+.+-|||||| |+|
T Consensus 329 ~vKVIDFGSSc~~~q~vytYiQSRfYRAP-EVILGlpY~~~IDmWSLGCIlA 379 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQRVYTYIQSRFYRAP-EVILGLPYDTAIDMWSLGCILA 379 (586)
T ss_pred ceeEEecccccccCCcceeeeeccccccc-hhhccCCCCCccceeehhhhHH
Confidence 799999999987655442 43445554 444455688889999999 543
No 76
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=9.3e-31 Score=211.38 Aligned_cols=181 Identities=20% Similarity=0.225 Sum_probs=145.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|++.+.||+|+||.||+|++..++..+|+|+++..... .......+..|..++..+ .|++++++++++.. .+.+++
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 36779999999999999999999999999998854322 233345667788888777 47888888888844 456889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+|||+++|+|...+.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEecCCCHHHeEECCC-CcEEEccCCCceecCCCC
Confidence 9999999999998887778999999999999999999999999 9999999999999866 589999999997643222
Q ss_pred e------eeeecccCccccCCCccccccceeeecc
Q 027788 186 R------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. ++..+.+ ++......++.++|+||+|+
T Consensus 156 ~~~~~~~gt~~y~a-PE~~~~~~~~~~~DiwSlGv 189 (323)
T cd05616 156 VTTKTFCGTPDYIA-PEIIAYQPYGKSVDWWAFGV 189 (323)
T ss_pred CccccCCCChhhcC-HHHhcCCCCCCccchhchhH
Confidence 1 1222223 34445566888899999993
No 77
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=3.7e-31 Score=214.63 Aligned_cols=182 Identities=21% Similarity=0.350 Sum_probs=144.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC---ceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR---NTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~---~~~ 103 (219)
|.+.+.||+|+||.||+|.+..++..||+|.++.... .......+.+|+.++++++||||+++++++..... ..+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc--cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 4788999999999999999999999999999874322 22334668899999999999999999988754332 357
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||++ ++|.+++.....+++..+..++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||+++....
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN--VFHRDLKPKNILANAD-CKLKICDFGLARVAFN 155 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEccCcccccccc
Confidence 89999995 689888887778999999999999999999999999 9999999999999865 6899999999976533
Q ss_pred cce---------eeeecccCccccC-CCccccccceeeecc
Q 027788 184 AIR---------RIRCWGRRSSWRR-SCTMRITRSLWTYTR 214 (219)
Q Consensus 184 ~~~---------~~~~~~~~~~~~~-~~~~~~~~diws~gi 214 (219)
... ++..+.+|+-... ...++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 221 1122233332221 245677899999993
No 78
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=8.6e-31 Score=212.26 Aligned_cols=179 Identities=21% Similarity=0.382 Sum_probs=148.7
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
.|.+.+.||+|+||.||++.+..++..+|+|.+.... .+...+.+.+|++++++++|||++++++++... +.+++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 80 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GEISI 80 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CEEEE
Confidence 3477799999999999999999999999999987542 345567789999999999999999999998544 56889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+|||+++++|.+++.....+++..+..++.|++.++.|||+. + ++|+||||+||+++.+ +.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCC-CcEEEccCccccccccc
Confidence 999999999999998777899999999999999999999975 6 9999999999999866 58999999999766443
Q ss_pred ce----eeeecccCccccCCCccccccceeeec
Q 027788 185 IR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. ++..+.+|+ ......++.++|+||+|
T Consensus 158 ~~~~~~g~~~y~aPE-~~~~~~~~~~~DiwslG 189 (331)
T cd06649 158 MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMG 189 (331)
T ss_pred ccccCCCCcCcCCHh-HhcCCCCCchHhHHHHH
Confidence 22 222333333 34455678889999999
No 79
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=4.6e-31 Score=212.57 Aligned_cols=176 Identities=20% Similarity=0.283 Sum_probs=140.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-hCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKT-LANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.||+|.++..... .....+.+..|..++.. .+||||+++++++.. ...++++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~ 77 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-EDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEY 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcC
Confidence 4699999999999999999999999999864322 22334555667777664 489999999998844 4578899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 78 LNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG--IIYRDLKLDNVLLDKD-GHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeCCCCHHHeEECCC-CCEEEccCcCCeECCCCCCccc
Confidence 999999998887778999999999999999999999999 9999999999999866 5899999999986533221
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DvwslG 183 (316)
T cd05592 155 TFCGTPDYIAP-EILKGQKYNESVDWWSFG 183 (316)
T ss_pred cccCCccccCH-HHHcCCCCCCcccchhHH
Confidence 22223333 334455678889999999
No 80
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=9.4e-31 Score=210.90 Aligned_cols=175 Identities=20% Similarity=0.298 Sum_probs=141.9
Q ss_pred eeeccccceEEEEEEe---cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFD---QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|+||.||++.+ ..++..+|+|+++.... .......+..|++++++++||||+++++.+.. ...++++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 77 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLIL 77 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEE
Confidence 5799999999999875 35789999999986442 22334567789999999999999999999854 45688999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
||+++++|.+++.....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.+ +.++|+|||++.........
T Consensus 78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEE-GHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHeEECCC-CcEEEeeccCCcccCCCCCc
Confidence 99999999998887778999999999999999999999999 9999999999999865 58999999999865443221
Q ss_pred ------eeecccCccccCCCccccccceeeec
Q 027788 188 ------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 ------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+..+.+| +......++.++|+||+|
T Consensus 155 ~~~~~g~~~y~aP-E~~~~~~~~~~~DiwslG 185 (318)
T cd05582 155 AYSFCGTVEYMAP-EVVNRRGHTQSADWWSFG 185 (318)
T ss_pred eecccCChhhcCH-HHHcCCCCCCccceeccc
Confidence 1122223 334445567789999999
No 81
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-32 Score=225.39 Aligned_cols=190 Identities=23% Similarity=0.311 Sum_probs=155.5
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC----C
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED----R 100 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~ 100 (219)
.-|...+.||+|+||.||+++++.+|+.||||.++... ...-+++.-+|++++++|+|+||++++++--... .
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~---~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES---SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc---ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccc
Confidence 34456688999999999999999999999999988654 2344577889999999999999999988763322 2
Q ss_pred ceEEEEeccccCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC-CCC--cEEEec
Q 027788 101 NTLNFITEVCTSGNLREYRKKH---RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG-NTG--QVKIGD 174 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~-~~~--~~~l~d 174 (219)
..-.++||||++|+|...+++- ..+++..++.++..++.|+.+||.++ |+||||||.||++-. ..| -.||+|
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~--IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG--IVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEeecCCCceEEeeec
Confidence 3346799999999999998753 35899999999999999999999999 999999999999642 213 259999
Q ss_pred cccceeccccceeeeecccCcc----ccC-CCccccccceeeeccccccC
Q 027788 175 LGVAAIVGRAIRRIRCWGRRSS----WRR-SCTMRITRSLWTYTRLGCAC 219 (219)
Q Consensus 175 fg~a~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~diws~gi~~~~c 219 (219)
||.|+.+.....-++.+|+++. .+. ...|+...|.||+|++++-|
T Consensus 168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~c 217 (732)
T KOG4250|consen 168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYEC 217 (732)
T ss_pred ccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHH
Confidence 9999999888877777877553 223 57888889999999766544
No 82
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=7.6e-31 Score=211.73 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=143.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|++..+++.||+|+++..... .....+.+..|..+++.+ +||||+++++++.. .+.++++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~ 77 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEY 77 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeC
Confidence 4689999999999999999999999998854332 233446677888888765 79999999999854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|...+.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDikp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 78 VNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG--VIYRDLKLDNILLDAE-GHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeecccceecccCCcccc
Confidence 999999998887778999999999999999999999999 9999999999999866 5899999999876432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DvwslG~ 184 (321)
T cd05591 155 TFCGTPDYIAP-EILQELEYGPSVDWWALGV 184 (321)
T ss_pred ccccCccccCH-HHHcCCCCCCccceechhH
Confidence 12223333 3445566788899999993
No 83
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=1.2e-30 Score=211.55 Aligned_cols=181 Identities=16% Similarity=0.228 Sum_probs=145.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++....+++.+|+|++...... .......+..|+.++..++|++++++++.+.. .+.++++
T Consensus 3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 79 (332)
T cd05623 3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETACFREERDVLVNGDNQWITTLHYAFQD--ENNLYLV 79 (332)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCEEEEE
Confidence 37789999999999999999999999999998743221 22334567889999999999999999998854 4568899
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++|+|.+++.. ...+++..+..++.|++.++.|||+.+ ++||||||+||+++.+ +.++|+|||++..+....
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--iiHrDlkp~Nili~~~-~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMN-GHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHEEECCC-CCEEEeecchheecccCC
Confidence 999999999999876 457899999999999999999999999 9999999999999855 589999999997654322
Q ss_pred e-------eeeecccCcccc----CCCccccccceeeec
Q 027788 186 R-------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
. ++..+.+|+-+. ....++.++|+||+|
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlG 195 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLG 195 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeH
Confidence 1 222333344332 134567789999999
No 84
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=6.6e-32 Score=229.74 Aligned_cols=182 Identities=25% Similarity=0.361 Sum_probs=148.3
Q ss_pred eeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 28 RYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
++.+.||+|+||+||+|+.. .+...||||.++... +..+.++|++|++++..|+||||++++++|... +.
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a---~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--~P 563 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA---ENQARQDFRREAELLAELQHPNIVRLLGVCREG--DP 563 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc---cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--Ce
Confidence 56688999999999999743 345679999988654 455789999999999999999999999999544 55
Q ss_pred EEEEeccccCCChHHHHHhCC----------C----CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC
Q 027788 103 LNFITEVCTSGNLREYRKKHR----------H----VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG 168 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~----------~----~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~ 168 (219)
+++|.||+..|+|.+|+.... . ++..+.+.|+.||+.|+.||.++. ++||||..+|+|+..+.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~--FVHRDLATRNCLVge~l- 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH--FVHRDLATRNCLVGENL- 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc--ccccchhhhhceeccce-
Confidence 888999999999999986432 2 678889999999999999999999 99999999999998664
Q ss_pred cEEEeccccceeccccceeeeecc--cCccccC-----CCccccccceeeec--cccc
Q 027788 169 QVKIGDLGVAAIVGRAIRRIRCWG--RRSSWRR-----SCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~diws~g--i~~~ 217 (219)
.|||+|||+++.+-+.+-...... -|-.|+. -+.|+.+|||||+| .|.+
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEI 698 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEI 698 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhh
Confidence 899999999998877653211111 1344543 55688999999999 5544
No 85
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=1.1e-30 Score=209.14 Aligned_cols=180 Identities=26% Similarity=0.367 Sum_probs=141.7
Q ss_pred CceeeeeeeeccccceEEEEEEecC----------------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQE----------------EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN 87 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 87 (219)
++| ++.+.||+|+||.||+|.... ++..||+|.+.... .......+.+|+.++++++|||
T Consensus 5 ~~~-~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 5 GHL-LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA---NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred hhC-eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC---CHHHHHHHHHHHHHHhhcCCCC
Confidence 444 788999999999999997532 34479999887432 3445577899999999999999
Q ss_pred ceEEEEEEecCCCceEEEEeccccCCChHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHhCC
Q 027788 88 IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHR-------------------HVSVKALKKWSKQILKGLNYLHTHE 148 (219)
Q Consensus 88 i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-------------------~~~~~~~~~i~~qv~~~l~~lh~~~ 148 (219)
|+++++++... +.++++|||+++++|.+++.... .+++..+..++.|++.|+.|||+.+
T Consensus 81 iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 81 IIRLLGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred eeEEEEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999654 45788999999999999875431 3567788999999999999999999
Q ss_pred CCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 149 PCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 149 ~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++|+||||+||+++.+ +.++|+|||+++........ +..+.+| +......++.++|+||+|
T Consensus 159 --ivH~dlkp~Nill~~~-~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 227 (304)
T cd05096 159 --FVHRDLATRNCLVGEN-LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAW-ECILMGKFTTASDVWAFG 227 (304)
T ss_pred --ccccCcchhheEEcCC-ccEEECCCccceecccCceeEecCcCCCCccccCH-HHHhcCCCCchhhhHHHH
Confidence 9999999999999865 58999999999876443321 1112233 333445678889999999
No 86
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=4.7e-31 Score=221.22 Aligned_cols=177 Identities=24% Similarity=0.341 Sum_probs=140.3
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec------CC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD------ED 99 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~ 99 (219)
.|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++.+++.. +.
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 3488899999999999999999999999999875321 123469999999999999999877643 22
Q ss_pred CceEEEEeccccCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 100 RNTLNFITEVCTSGNLREYRK----KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~----~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
..+++++|||+++ ++.+++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+.+.+||+||
T Consensus 139 ~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~--IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 139 NIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF--ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred ceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCcCHHHEEEcCCCCceeeecc
Confidence 3467789999974 6665543 3456889999999999999999999999 9999999999999866557999999
Q ss_pred ccceeccccce-----eeeecccCccccCCCccccccceeeec
Q 027788 176 GVAAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+|+.+..... ++..+.+|+.+.....++.++|+||+|
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 258 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLG 258 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHH
Confidence 99987654332 222344555455555688889999999
No 87
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=1.7e-30 Score=210.27 Aligned_cols=176 Identities=20% Similarity=0.295 Sum_probs=144.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|....+++.+|+|+++..... +....+.+..|+.++.++ +||+|+.+++++.. .+.++++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 77 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEY 77 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeC
Confidence 4699999999999999999999999999854332 234557788999999888 59999999998854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 78 VNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG--IIYRDLKLDNVLLDAD-GHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEeCC-CCEEEeccccceeccCCCCcee
Confidence 999999988887778999999999999999999999999 9999999999999866 5899999999975322211
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+ ++......++.++|+||+|
T Consensus 155 ~~~gt~~y~a-PE~~~~~~~~~~~DiwslG 183 (327)
T cd05617 155 TFCGTPNYIA-PEILRGEEYGFSVDWWALG 183 (327)
T ss_pred cccCCcccCC-HHHHCCCCCCchheeehhH
Confidence 1222223 3444566778889999999
No 88
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=7.3e-31 Score=211.78 Aligned_cols=176 Identities=21% Similarity=0.264 Sum_probs=142.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|.+..+++.||+|.++..... .....+.+..|..++..+ +||||+++++++. ..+.++++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~--~~~~~~iv~Ey 77 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLYCCFQ--TPDRLFFVMEF 77 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHHHHHHHHHHHhccCCCchhceeeEEE--cCCEEEEEEcC
Confidence 4699999999999999999999999998754322 233446677888888766 6999999999884 44568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 78 ~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~--ivH~dlkp~NIli~~~-~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 78 VNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG--IIYRDLKLDNVLLDHE-GHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCCHHHeEECCC-CcEEEeeCCCCeecCcCCCccc
Confidence 999999998887778999999999999999999999999 9999999999999866 5899999999876432211
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG 183 (320)
T cd05590 155 TFCGTPDYIAP-EILQEMLYGPSVDWWAMG 183 (320)
T ss_pred ccccCccccCH-HHHcCCCCCCccchhhhH
Confidence 12222233 344556677889999999
No 89
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.5e-30 Score=210.75 Aligned_cols=176 Identities=15% Similarity=0.255 Sum_probs=140.5
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh---CCCCceEEEEEEecCCCceEEEEecc
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL---ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
||+|+||.||+|.+..+++.||+|++....... .........|..++..+ .||||+++++.+. ....++++|||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~--~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ--TDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe--cCCeEEEEEcC
Confidence 699999999999999999999999987543221 22334455677777655 6999999998884 44568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|...+.....+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~--ivHrDlkp~Nili~~~-~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 78 MSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD--IVYRDLKPENILLDAT-GHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred CCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeEECCC-CCEEEecCCcCcCCCCCCCCcc
Confidence 999999998887788999999999999999999999999 9999999999999865 5899999999876432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+|+.......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceecccc
Confidence 2233444544444555778899999993
No 90
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=6.3e-31 Score=208.69 Aligned_cols=180 Identities=20% Similarity=0.323 Sum_probs=145.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|++..+++.+|+|.++.... .....+.+.+|+.+++.++||||+++++++. ....++++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv 78 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE--NEEVKETTLRELKMLRTLKQENIVELKEAFR--RRGKLYLV 78 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc--cccchhhHHHHHHHHHhCCCccccchhhhEe--cCCEEEEE
Confidence 4788999999999999999999999999999875432 2334567788999999999999999998884 44578899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||++++.+..+......+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND--IVHRDIKPENLLISHN-DVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccCccccccccc
Confidence 999998777665554557899999999999999999999999 9999999999999855 5899999999987643321
Q ss_pred -------eeeecccCccccCCCccccccceeeecc
Q 027788 187 -------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 -------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~y~aP-E~~~~~~~~~~~DiwslGv 189 (287)
T cd07848 156 ANYTEYVATRWYRSP-ELLLGAPYGKAVDMWSVGC 189 (287)
T ss_pred ccccccccccccCCc-HHHcCCCCCCchhHHhHHH
Confidence 12223333 3334556778899999993
No 91
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-31 Score=214.02 Aligned_cols=176 Identities=27% Similarity=0.384 Sum_probs=150.5
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|.||.||-|.+.++|+.||||++.+..+.. .+-..+++|+.+|+++.||.|+.+..-| +..+.+|+|||-+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~--kqesqlR~EVaILq~l~HPGiV~le~M~--ET~ervFVVMEKl 645 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT--KQESQLRNEVAILQNLHHPGIVNLECMF--ETPERVFVVMEKL 645 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCC--chHHHHHHHHHHHHhcCCCCeeEEEEee--cCCceEEEEehhh
Confidence 57999999999999999999999999998766643 3347789999999999999999988777 6667799999999
Q ss_pred cCCChHHHH-Hh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC--CCCcEEEeccccceeccccce
Q 027788 111 TSGNLREYR-KK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG--NTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 111 ~~g~L~~~~-~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~--~~~~~~l~dfg~a~~~~~~~~ 186 (219)
. |+.-..+ ++ .+.+++....+++.||+.||.|||-++ |+|+||||+|+|+.+ +..++||+|||+|++++...-
T Consensus 646 ~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn--IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 646 H-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN--IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred c-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc--eeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 6 5655544 33 467999999999999999999999999 999999999999863 335799999999999988776
Q ss_pred eeeecccCc----cccCCCccccccceeeec
Q 027788 187 RIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
+.+.+|+|. +..++..|+..=|+||.|
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVG 753 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVG 753 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeee
Confidence 767777765 457788899999999999
No 92
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=223.08 Aligned_cols=174 Identities=24% Similarity=0.416 Sum_probs=149.0
Q ss_pred eeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEecccc
Q 027788 32 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCT 111 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 111 (219)
.+|+|.||+||-|++..++..+|||.+..+ +...++.++.||.+++.|.|.||+++++.+. .+.++-++||-.|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek----dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s--enGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK----DSREVQPLHEEIALHSTLRHKNIVRYLGSVS--ENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc----cchhhccHHHHHHHHHHHhhHhHHHHhhccC--CCCeEEEEeecCC
Confidence 699999999999999999999999998865 4566789999999999999999999999984 4457889999999
Q ss_pred CCChHHHHHh-CCCC--CHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc---
Q 027788 112 SGNLREYRKK-HRHV--SVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI--- 185 (219)
Q Consensus 112 ~g~L~~~~~~-~~~~--~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~--- 185 (219)
||+|.+++++ ++++ ++.+...+..||++||.|||.+. |+|||||-+|++++--.|.+||+|||.++++-.-.
T Consensus 656 GGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~--IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK--IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred CCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc--eeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 9999998864 5777 89999999999999999999999 99999999999998777889999999998874321
Q ss_pred ---eeeeecccCccc-cCCCccccccceeeec
Q 027788 186 ---RRIRCWGRRSSW-RRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ---~~~~~~~~~~~~-~~~~~~~~~~diws~g 213 (219)
+++--+-+|+.. ...++|..++||||||
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~G 765 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFG 765 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhcc
Confidence 233334455543 3466788889999999
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=1.2e-30 Score=211.64 Aligned_cols=179 Identities=22% Similarity=0.385 Sum_probs=148.4
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
.|.+.+.||+|+||.||+|.+..++..+|+|.++... .......+.+|+.+++.++|+||+++++++.. .+.+++
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 80 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISI 80 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--CCEEEE
Confidence 3478899999999999999999999999999887543 34445778899999999999999999999865 456889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+|||+++++|.+++.....+++..+..++.|++.++.|||+. + ++|+||||+||+++.+ +.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChhhEEEcCC-CCEEEeeCCcchhhhhh
Confidence 999999999999988777889999999999999999999974 6 9999999999999865 58999999999765432
Q ss_pred ce----eeeecccCccccCCCccccccceeeec
Q 027788 185 IR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. ++..+.+|+ ......++.++|+||+|
T Consensus 158 ~~~~~~~~~~y~aPE-~~~~~~~~~~~DvwslG 189 (333)
T cd06650 158 MANSFVGTRSYMSPE-RLQGTHYSVQSDIWSMG 189 (333)
T ss_pred ccccCCCCccccCHH-HhcCCCCCcHHHHHHHH
Confidence 21 222334443 34455677889999999
No 94
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=216.48 Aligned_cols=188 Identities=26% Similarity=0.363 Sum_probs=160.3
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
.+.+.|-| .+++-||+|.|..|-+|++.-+|+.||||++.+... +...-.++..|+..++.+|||||+++|.+. .
T Consensus 13 DgkIAGLY-DLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl--D~~st~hlfqEVRCMKLVQHpNiVRLYEVi--D 87 (864)
T KOG4717|consen 13 DGKIAGLY-DLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL--DTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--D 87 (864)
T ss_pred ccceeeee-hhhhhhcCCceehhhhhhhhcccceeEEEEeccccc--chhhhhHHHHHHHHHHHhcCcCeeeeeehh--c
Confidence 34455666 899999999999999999999999999999987654 344457788999999999999999999998 4
Q ss_pred CCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.+..+|++.|.=.+|+|.+++-++ ..++++....++.||+.|+.|+|... ++||||||+|+.+....|-+||.|||+
T Consensus 88 TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH--VVHRDLKPENVVFFEKlGlVKLTDFGF 165 (864)
T KOG4717|consen 88 TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH--VVHRDLKPENVVFFEKLGLVKLTDFGF 165 (864)
T ss_pred ccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh--hhcccCCcceeEEeeecCceEeeeccc
Confidence 455699999999999999998665 56999999999999999999999999 999999999999887888999999999
Q ss_pred ceeccccceeeeeccc----CccccCCCccccc-cceeeec
Q 027788 178 AAIVGRAIRRIRCWGR----RSSWRRSCTMRIT-RSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~diws~g 213 (219)
+-.+.+...-++.+|+ -++......|+++ -||||||
T Consensus 166 SNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLG 206 (864)
T KOG4717|consen 166 SNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLG 206 (864)
T ss_pred cccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHH
Confidence 9999888765444443 2355666777766 7999999
No 95
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.5e-30 Score=210.16 Aligned_cols=180 Identities=21% Similarity=0.238 Sum_probs=144.2
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC-CCceEEEEEEecCCCceEEEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN-KNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv 106 (219)
++.+.||+|+||.||+|.+..+++.||+|+++..... .....+.+..|..+++.+.| ++++++.+++.. .+.++++
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv 79 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYFV 79 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEEE
Confidence 5678999999999999999999999999998854322 23345667789999888865 677778888744 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|.+++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivHrDikp~Nill~~~-~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEeccccccccCCCCc
Confidence 999999999999888778999999999999999999999999 9999999999999866 5899999999876433221
Q ss_pred ------eeeecccCccccCCCccccccceeeecc
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 157 ~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwslGv 189 (323)
T cd05615 157 TTRTFCGTPDYIAP-EIIAYQPYGKSVDWWAYGV 189 (323)
T ss_pred cccCccCCccccCH-HHHcCCCCCCccchhhhHH
Confidence 12223333 3444556788899999993
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=1.6e-30 Score=210.15 Aligned_cols=179 Identities=20% Similarity=0.252 Sum_probs=142.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHH---HhhCCCCceEEEEEEecCCCceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLL---KTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l---~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
|++.+.||+|+||.||+|.+..+++.||+|+++..... .....+.+..|+.++ +.++||||+++++++. ..+.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~--~~~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVESLMCEKRIFETANSERHPFLVNLFACFQ--TEDHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhccccCCCChhceeeEEE--cCCEE
Confidence 36779999999999999999999999999999854321 223345667776655 4667999999999884 44578
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||+++++|...+.. ..+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++.....
T Consensus 78 ~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrdlkp~Nill~~~-~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENK--IVYRDLKLDNLLLDTE-GFVKIADFGLCKEGMG 153 (324)
T ss_pred EEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eEecCCCHHHeEECCC-CcEEeCcccCCccCCC
Confidence 899999999999887654 46899999999999999999999999 9999999999999866 5899999999875432
Q ss_pred cce------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+.+| +......++.++|+||+|
T Consensus 154 ~~~~~~~~~g~~~y~aP-E~~~~~~~~~~~DiwslG 188 (324)
T cd05589 154 FGDRTSTFCGTPEFLAP-EVLTETSYTRAVDWWGLG 188 (324)
T ss_pred CCCcccccccCccccCH-hHhcCCCCCcccchhhHH
Confidence 221 12223333 344556678889999999
No 97
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.2e-30 Score=204.04 Aligned_cols=180 Identities=17% Similarity=0.279 Sum_probs=144.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++.+..+++.||+|.+...... .......+.+|+.+++.++|||++++++.+. ..+.++++
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv 78 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYE--TKDALCLV 78 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-hhhhHHHHHHHHHHHHhcCCCCEeeeeeeec--CCCeEEEE
Confidence 36678999999999999999999999999998754321 1222355678999999999999999998884 44578999
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER--IVYRDLKPENILLDDY-GHIRISDLGLAVEIPEG 155 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC--cEecCCCHHHEEECCC-CCEEEeeCCCceecCCC
Confidence 9999999998876543 45899999999999999999999999 9999999999999855 68999999999876433
Q ss_pred cee-----eeecccCccccCCCccccccceeeec
Q 027788 185 IRR-----IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~-----~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... +..+.+ ++......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~y~a-PE~~~~~~~~~~~Diws~G 188 (285)
T cd05605 156 ETIRGRVGTVGYMA-PEVVKNERYTFSPDWWGLG 188 (285)
T ss_pred CccccccCCCCccC-cHHhcCCCCCccccchhHH
Confidence 221 122223 3444556678889999999
No 98
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=4.5e-30 Score=203.66 Aligned_cols=185 Identities=27% Similarity=0.439 Sum_probs=149.6
Q ss_pred CCceeeeeeeeccccceEEEEEEe----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFD----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
.++++++.+.||+|+||.||.|.. ..++..||+|.++... .....+.+.+|+.+++.++|||++++.+++...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 2 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred chhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 356778899999999999999973 4678899999976442 344557789999999999999999999988766
Q ss_pred CCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
+....+++|||+++++|.+++... ..+++..+..++.|++.++.|||+++ ++|+||||+||+++.+ +.++|+|||+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g--i~H~dlkp~Nil~~~~-~~~~l~dfg~ 155 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESE-HQVKIGDFGL 155 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccchheEEEcCC-CCEEECCCcc
Confidence 567788999999999999988654 35889999999999999999999999 9999999999999865 5899999999
Q ss_pred ceecccccee---------eeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIRR---------IRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+..+...... ...+.+| +......+..++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~ap-E~~~~~~~~~~~Di~slG~ 200 (284)
T cd05079 156 TKAIETDKEYYTVKDDLDSPVFWYAP-ECLIQSKFYIASDVWSFGV 200 (284)
T ss_pred ccccccCccceeecCCCCCCccccCH-HHhccCCCCccccchhhhh
Confidence 9876543221 1112222 3344556777899999993
No 99
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.7e-30 Score=218.43 Aligned_cols=185 Identities=22% Similarity=0.309 Sum_probs=148.5
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC-
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR- 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~- 100 (219)
..++| .+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.++..++|+|+++++..+...+.
T Consensus 30 ~~~rY-~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~--~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 30 QAKKY-WISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM--SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred cCCCE-EEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 33555 888999999999999999999999999999876543 34555778899999999999999998877643322
Q ss_pred -----ceEEEEeccccCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 101 -----NTLNFITEVCTSGNLREYRKKH----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 101 -----~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
..++++|||+++|+|.+++... ..+++..+..++.|++.+|.|||+.+ ++||||||+||+++.+ +.++
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~--IiHrDLKP~NILl~~~-~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH--MIHRDIKSANILLCSN-GLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEeCC-CCEE
Confidence 2467899999999999887542 46889999999999999999999999 9999999999999866 5899
Q ss_pred Eeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+|||+++.+..... ++..+.+| +......++.++||||+|
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aP-E~~~~~~~s~k~DVwSlG 232 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAP-EIWRRKPYSKKADMFSLG 232 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCH-HHhCCCCCCcHHHHHHHH
Confidence 999999987643221 12223333 334456688889999999
No 100
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=3.2e-30 Score=218.27 Aligned_cols=182 Identities=19% Similarity=0.278 Sum_probs=147.0
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCC-CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEE-GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
+..+.|.+.+.||+|++|.||.|....+ +..|++|.+... +......+.+|+.+++.++||||+++++.+..+
T Consensus 64 ~~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-- 137 (478)
T PTZ00267 64 PREHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAYARSELHCLAACDHFGIVKHFDDFKSD-- 137 (478)
T ss_pred CcceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--
Confidence 4455568999999999999999998877 788999876533 345556788899999999999999999998544
Q ss_pred ceEEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 101 NTLNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
+.++++|||+++|+|.+++.. ...+++..+..++.|++.||.|+|+.+ ++||||||+||+++.+ +.++|+|||
T Consensus 138 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~~~-~~~kL~DFg 214 (478)
T PTZ00267 138 DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK--MMHRDLKSANIFLMPT-GIIKLGDFG 214 (478)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCcCHHhEEECCC-CcEEEEeCc
Confidence 568899999999999887642 346889999999999999999999999 9999999999999865 589999999
Q ss_pred cceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 177 VAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 177 ~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+++....... ++..+.+| +......++.++|+||+|
T Consensus 215 la~~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~Dv~slG 258 (478)
T PTZ00267 215 FSKQYSDSVSLDVASSFCGTPYYLAP-ELWERKRYSKKADMWSLG 258 (478)
T ss_pred CceecCCccccccccccCCCccccCH-hHhCCCCCCcHHhHHHHH
Confidence 9987654321 11122233 334456678889999999
No 101
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.9e-30 Score=209.10 Aligned_cols=176 Identities=20% Similarity=0.263 Sum_probs=143.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|++..++..||+|+++..... .......+..|+.+++.+ +||||+++++++. ..+.++++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~--~~~~~~lv~e~ 77 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ--TKDRLFFVMEY 77 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhccCCCCccceeeEEE--cCCEEEEEEcC
Confidence 4699999999999999999999999999854322 233446677899998877 6999999999884 44578999999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 78 VNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG--IIYRDLKLDNVLLDSE-GHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEccCCCHHHeEECCC-CcEEecccCCCeecCcCCCccc
Confidence 999999998887778999999999999999999999999 9999999999999866 5899999999875322221
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+ ++......++.++|+||+|
T Consensus 155 ~~~g~~~y~a-PE~~~~~~~~~~~DiwslG 183 (318)
T cd05570 155 TFCGTPDYIA-PEILSYQPYGPAVDWWALG 183 (318)
T ss_pred ceecCccccC-HHHhcCCCCCcchhhhhHH
Confidence 1122223 3444556678889999999
No 102
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=2.9e-30 Score=212.52 Aligned_cols=179 Identities=26% Similarity=0.418 Sum_probs=141.1
Q ss_pred eeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDED 99 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 99 (219)
-+++.+.||+|+||.||+|.. ..++..||+|.++... .....+.+.+|+.+++.+ +||||+++++.+...
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~- 111 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHINIVNLLGACTVG- 111 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc---CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC-
Confidence 348899999999999999963 3556789999987432 233446788999999999 899999999998544
Q ss_pred CceEEEEeccccCCChHHHHHhCC--------------------------------------------------------
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHR-------------------------------------------------------- 123 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~-------------------------------------------------------- 123 (219)
...+++|||+++|+|.+++....
T Consensus 112 -~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 112 -GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred -CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 45788999999999998875321
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 124 -------------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 124 -------------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
.+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN--CIHRDLAARNILLTHG-RITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCchhhEEEECC-CcEEEecCccceeccCc
Confidence 3577788999999999999999999 9999999999999855 57999999999876443
Q ss_pred ceee--------eecccCccccCCCccccccceeeec
Q 027788 185 IRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ..+.+ ++......++.++|+||||
T Consensus 268 ~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~sDi~slG 303 (375)
T cd05104 268 SNYVVKGNARLPVKWMA-PESIFNCVYTFESDVWSYG 303 (375)
T ss_pred ccccccCCCCCCcceeC-hhHhcCCCCCCCCCHHHHH
Confidence 2110 11223 3444556678889999999
No 103
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=2.7e-30 Score=208.11 Aligned_cols=176 Identities=21% Similarity=0.291 Sum_probs=141.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-hCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKT-LANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|++..++..||+|.++..... .....+....|..++.. ++|||++++++.+. +.+.++++|||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--~~~~~~lv~E~ 77 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECTMVEKRVLALAWENPFLTHLYCTFQ--TKEHLFFVMEF 77 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHHHHHHHHHHhccCCCCccCeeEEEE--eCCEEEEEECC
Confidence 4699999999999999999999999998854321 12234556778887765 48999999999985 44678999999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++++|..++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivHrDlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG--IIYRDLKLDNVMLDRD-GHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCHHHeEECCC-CCEEeCccCCCeecccCCCcee
Confidence 999999998887778999999999999999999999999 9999999999999866 5899999999875422211
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DiwslG 183 (316)
T cd05620 155 TFCGTPDYIAP-EILQGLKYTFSVDWWSFG 183 (316)
T ss_pred ccCCCcCccCH-HHHcCCCCCcccchhhhH
Confidence 12223333 334455678889999999
No 104
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=2.7e-30 Score=208.13 Aligned_cols=177 Identities=19% Similarity=0.271 Sum_probs=141.5
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-hCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKT-LANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+||.||+|++..+++.||+|.++...... .........|..++.. ++||||+++++++.. ...++++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~ey 77 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFFVMEY 77 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEEEEeC
Confidence 46999999999999999999999999988643211 2233556677777765 589999999999854 4568899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--- 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--- 186 (219)
+++|+|..++.....+++..+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|+|||++........
T Consensus 78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 78 LNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG--IVYRDLKLDNILLDTD-GHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEeCCCCHHHEEECCC-CCEEEccCCcceECCCCCCcee
Confidence 999999999887778999999999999999999999999 9999999999999866 5899999999876432221
Q ss_pred ---eeeecccCccccCCCccccccceeeecc
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+| +......++.++|+||+|+
T Consensus 155 ~~~gt~~y~aP-E~~~~~~~~~~~DvwslG~ 184 (316)
T cd05619 155 TFCGTPDYIAP-EILLGQKYNTSVDWWSFGV 184 (316)
T ss_pred eecCCccccCH-HHHcCCCCCchhhhhhHHH
Confidence 12223333 4445566788899999993
No 105
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=4.9e-30 Score=203.28 Aligned_cols=183 Identities=28% Similarity=0.442 Sum_probs=148.3
Q ss_pred CCceeeeeeeeccccceEEEEEE----ecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAF----DQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
.+||+++.+.||+|+||.||.+. ...++..||+|.++... .......+.+|++++++++|||++++++++...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ 78 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 46788888999999999998764 34577899999987542 233456788999999999999999999988766
Q ss_pred CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+...++++||++++++|.+++... .+++..+..++.|++.++.+||+++ ++|+||||+||+++.+ +.++|+|||++
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~ 154 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQH--YIHRDLAARNVLLDND-RLVKIGDFGLA 154 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCC--eeccccChheEEEcCC-CcEEEeecccc
Confidence 667789999999999999988654 5899999999999999999999999 9999999999999866 58999999999
Q ss_pred eeccccce---------eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ ....+.+| +......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~P-E~~~~~~~~~~~Di~slG 197 (283)
T cd05080 155 KAVPEGHEYYRVREDGDSPVFWYAV-ECLKENKFSYASDVWSFG 197 (283)
T ss_pred cccCCcchhhccCCCCCCCceeeCH-hHhcccCCCcccccHHHH
Confidence 87654322 11112233 334455677889999999
No 106
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.7e-30 Score=213.61 Aligned_cols=180 Identities=23% Similarity=0.349 Sum_probs=145.2
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---CceEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED---RNTLN 104 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 104 (219)
.+.+.||+|+||.||+|.+..+++.||+|.+..... +....+++.+|+.+++.++|+||+++++++..++ ...++
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ--NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEecccccc--chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 567899999999999999999999999998764321 3345577889999999999999999999885443 12678
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+++||+. ++|...+.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dlkp~Nili~~~-~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG--ILHRDIKPGNLLVNSN-CVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHHEEECCC-CCEEeccccceeecccC
Confidence 9999996 578887776678999999999999999999999999 9999999999999865 58999999999865433
Q ss_pred ce-------eeeecccCccccCCCccccccceeeec
Q 027788 185 IR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. .+..+.+|+.+.....++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVG 192 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHH
Confidence 21 112233444444445577789999999
No 107
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=7.5e-30 Score=202.22 Aligned_cols=181 Identities=25% Similarity=0.449 Sum_probs=147.8
Q ss_pred ceeeeeeeeccccceEEEEEE----ecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 25 RYGRYNELLGSGAVKKVYRAF----DQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
+.+++.+.||+|+||.||.|. +..++..||+|.++.. .....+.+.+|+.+++.++|||++++.+++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 345888999999999999997 4567889999987643 34556788999999999999999999998866666
Q ss_pred ceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 101 NTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
..+++++||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~ 156 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR--YVHRDLATRNILVESE-NRVKIGDFGLTK 156 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHhhEEECCC-CeEEECCCcccc
Confidence 7789999999999999988654 45889999999999999999999999 9999999999999865 589999999998
Q ss_pred ecccccee---------eeecccCccccCCCccccccceeeec
Q 027788 180 IVGRAIRR---------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 180 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ ...+.+| +......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 198 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAP-ESLTESKFSVASDVWSFG 198 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCH-HHhccCCcChHHHHHHHH
Confidence 76543321 1112333 334455677789999999
No 108
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=9.4e-30 Score=199.28 Aligned_cols=182 Identities=26% Similarity=0.425 Sum_probs=148.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC-CHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD-DPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|++|.||.|.+..+++.+++|.+....... .....+.+.+|++++++++||||+++++++.. ...+++
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~ 81 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD--DETLSI 81 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc--CCeEEE
Confidence 478899999999999999999999999999987543211 12234678899999999999999999999854 457899
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++|++++++|.+.+.....+++.....++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||+++......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nilv~~~-~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeecccceeccccc
Confidence 9999999999998887778899999999999999999999999 9999999999999855 589999999998764432
Q ss_pred eee--------eecccCccccCCCccccccceeeec
Q 027788 186 RRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... .....++++.....++.++|+||+|
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVG 194 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHH
Confidence 111 1122334444555577889999999
No 109
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=216.07 Aligned_cols=186 Identities=24% Similarity=0.352 Sum_probs=152.9
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
-++++......+...||+|.||+||+|.. ..+||||++++... .+.+++.|++|+.++++-+|.||+-+.+++..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w---hGdVAVK~Lnv~~p--t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRW---HGDVAVKLLNVDDP--TPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccc---ccceEEEEEecCCC--CHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 34555555557888999999999999976 35799999997764 56789999999999999999999999999954
Q ss_pred CCCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
+. +.+++.+|+|.+|..++.- ...+.......|+.|+++|+.|||.++ |+|+|||..||++..+ ++|||.|||
T Consensus 460 p~---~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~--IIHrDLKSnNIFl~~~-~kVkIgDFG 533 (678)
T KOG0193|consen 460 PP---LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN--IIHRDLKSNNIFLHED-LKVKIGDFG 533 (678)
T ss_pred Cc---eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh--hhhhhccccceEEccC-CcEEEeccc
Confidence 43 4789999999999998754 357899999999999999999999999 9999999999999855 699999999
Q ss_pred cceeccccce--------eeeecccCcc--ccCCCccccccceeeecc
Q 027788 177 VAAIVGRAIR--------RIRCWGRRSS--WRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 177 ~a~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~diws~gi 214 (219)
++..-..... +-.+|-+||- .....+|+..||+|||||
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGi 581 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGI 581 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhH
Confidence 9976654422 2234555553 245667888899999993
No 110
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.3e-30 Score=213.05 Aligned_cols=171 Identities=19% Similarity=0.270 Sum_probs=139.8
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
.|.+.+.||+|+||.||+|.+..+++.||+|... ...+.+|+.++++++||||+++++++.. ....++
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----------~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~l 160 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----------RGGTATEAHILRAINHPSIIQLKGTFTY--NKFTCL 160 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----------hhhhHHHHHHHHhCCCCCCCCEeEEEEE--CCeeEE
Confidence 3488899999999999999999999999999643 1345689999999999999999999854 356788
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++|++. ++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+++......
T Consensus 161 v~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~--IvHrDiKP~NIll~~~-~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR--IIHRDIKAENIFINHP-GDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHhEEEcCC-CCEEEEeCCccccccccc
Confidence 999985 688888877778999999999999999999999999 9999999999999865 589999999997543211
Q ss_pred e-------eeeecccCccccCCCccccccceeeec
Q 027788 186 R-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+| +......++.++|+||+|
T Consensus 237 ~~~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwSlG 270 (391)
T PHA03212 237 ANKYYGWAGTIATNAP-ELLARDPYGPAVDIWSAG 270 (391)
T ss_pred ccccccccCccCCCCh-hhhcCCCCCcHHHHHHHH
Confidence 1 22223333 344455678889999999
No 111
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=4.8e-30 Score=209.64 Aligned_cols=175 Identities=21% Similarity=0.395 Sum_probs=138.8
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+++++.++|+||+++++++. ....++++|
T Consensus 77 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~ 151 (353)
T PLN00034 77 ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTVRRQICREIEILRDVNHPNVVKCHDMFD--HNGEIQVLL 151 (353)
T ss_pred hhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHHHHHHHHHHHHHHhCCCCCcceeeeEec--cCCeEEEEE
Confidence 56688999999999999999999999999986432 3445577889999999999999999999884 445688999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
||+++++|... ....+..+..++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||+++.......
T Consensus 152 e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~-~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRH--IVHRDIKPSNLLINSA-KNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEcccccceeccccccc
Confidence 99999988642 23567788899999999999999999 9999999999999865 5899999999987654321
Q ss_pred -----eeeecccCccccC----CCccccccceeeecc
Q 027788 187 -----RIRCWGRRSSWRR----SCTMRITRSLWTYTR 214 (219)
Q Consensus 187 -----~~~~~~~~~~~~~----~~~~~~~~diws~gi 214 (219)
++..+.+|+.+.. ......++||||||+
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGv 261 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGV 261 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHH
Confidence 2223344443321 122334799999993
No 112
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=4.7e-30 Score=203.27 Aligned_cols=174 Identities=21% Similarity=0.316 Sum_probs=139.9
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|+||.||++.+..+++.+|+|.+...... .....+.+..|+.+++.++|+|++++.+.+. ....++++|||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~--~~~~~~lv~e~~~~ 77 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ--TKTDLCLVMTIMNG 77 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc--CCCeEEEEEeCCCC
Confidence 69999999999999999999999998754322 2233466788999999999999999988884 44568899999999
Q ss_pred CChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--
Q 027788 113 GNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-- 186 (219)
Q Consensus 113 g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-- 186 (219)
++|...+.. ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 78 g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~ 154 (280)
T cd05608 78 GDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR--IIYRDLKPENVLLDND-GNVRISDLGLAVELKDGQSKT 154 (280)
T ss_pred CCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCccceecCCCCccc
Confidence 999877632 346899999999999999999999999 9999999999999855 6899999999987654322
Q ss_pred ----eeeecccCccccCCCccccccceeeec
Q 027788 187 ----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 155 ~~~~g~~~y~aP-E~~~~~~~~~~~DvwslG 184 (280)
T cd05608 155 KGYAGTPGFMAP-ELLQGEEYDFSVDYFALG 184 (280)
T ss_pred cccCCCcCccCH-HHhcCCCCCccccHHHHH
Confidence 11122333 344455677889999999
No 113
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=8e-30 Score=225.53 Aligned_cols=187 Identities=20% Similarity=0.353 Sum_probs=150.3
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
.-|.+.+.||+|+||.||+|.+..++..+|+|.+..... .......+..|+.+++.|+||||+++++.|.......+|
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l--~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL--KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 344888999999999999999999999999999875543 344557788999999999999999999998777777899
Q ss_pred EEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCeeeeCCCCCceEEeCC---------
Q 027788 105 FITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHE-----PCVIHRDLNCSNVFVNGN--------- 166 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~-----~~i~h~dl~~~nili~~~--------- 166 (219)
++|||+++++|.+++.. ...+++..++.++.||+.||.|||..+ +.|+|+||||+|||++.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999988764 246899999999999999999999843 239999999999999632
Q ss_pred -------CCcEEEeccccceeccccce-----eeeecccCccccC-CCccccccceeeec
Q 027788 167 -------TGQVKIGDLGVAAIVGRAIR-----RIRCWGRRSSWRR-SCTMRITRSLWTYT 213 (219)
Q Consensus 167 -------~~~~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~diws~g 213 (219)
.+.++|+|||++........ ++..+.+|+.+.. ...++.++||||||
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG 230 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence 12489999999987643322 2333444443332 34577889999999
No 114
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=1.2e-29 Score=199.20 Aligned_cols=183 Identities=26% Similarity=0.462 Sum_probs=149.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|++.+.||+|+||.||.|.+..++..|++|.+...... ......+.+.+|+.+++++.|||++++++.+.......+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 37789999999999999999999999999988643221 12345678889999999999999999999887655667889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+||++++++|.+++.....+++..+..++.|++.++.+||+++ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM--IVHRDIKGANILRDSV-GNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEecCC-CCEEECcCcccccccccc
Confidence 9999999999999887777899999999999999999999999 9999999999999855 589999999998654321
Q ss_pred e---------eeeecccCccccCCCccccccceeeec
Q 027788 186 R---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+|+. .....++.++|+||+|
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG 196 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEV-ISGEGYGRKADIWSVG 196 (265)
T ss_pred ccccccccCCCCccccChhh-hcCCCCCcchhHHHHH
Confidence 1 1122333433 3345567789999999
No 115
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=3.9e-30 Score=206.46 Aligned_cols=180 Identities=26% Similarity=0.400 Sum_probs=143.4
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|++..++..+|+|.++.... ......+.+|+.++++++|||++++++++..+ +..
T Consensus 6 ~~y-~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 79 (309)
T cd07872 6 ETY-IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIVHTD--KSL 79 (309)
T ss_pred Cce-EEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc---CCcchhHHHHHHHHHhCCCCCcceEEEEEeeC--CeE
Confidence 445 777999999999999999999999999999875432 12224567899999999999999999998544 568
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++|||+++ +|.+++... ..++...+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||++....
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 80 TLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKS 155 (309)
T ss_pred EEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECccccceecC
Confidence 889999974 777766543 45788999999999999999999999 9999999999999865 589999999997654
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .+..+.+|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (309)
T cd07872 156 VPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVG 192 (309)
T ss_pred CCccccccccccccccCCHHHhCCCCCCcHHHHHHHH
Confidence 3221 122233444444455677889999999
No 116
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=225.48 Aligned_cols=184 Identities=22% Similarity=0.362 Sum_probs=157.4
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
.+|.|...||.|+||.||+|..+.++..-|.|+|..+ ....++.++-||++|..++||+|+++++.|+.+++ +|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk----seEELEDylVEIeILa~CdHP~ivkLl~ayy~enk--Lw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK----SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK--LW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc----chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc--eE
Confidence 3457888999999999999999999999999998865 45567889999999999999999999998877755 89
Q ss_pred EEeccccCCChHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 105 FITEVCTSGNLREYR-KKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 105 lv~e~~~~g~L~~~~-~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++.|+|+||-....+ .....+.+.++..+++|++.||.|||+++ |+|||||.-|||++.+ |.++|+|||++.....
T Consensus 106 iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~--iIHRDLKAGNiL~Tld-GdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN--IIHRDLKAGNILLTLD-GDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc--hhhhhccccceEEEec-CcEeeecccccccchh
Confidence 999999998887654 45678999999999999999999999999 9999999999999976 6999999999988866
Q ss_pred cce------eeeecccCcc----ccCCCccccccceeeeccccc
Q 027788 184 AIR------RIRCWGRRSS----WRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 184 ~~~------~~~~~~~~~~----~~~~~~~~~~~diws~gi~~~ 217 (219)
... ++..|.+|+- -....+|+.++|||||||+-|
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLI 226 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLI 226 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHH
Confidence 543 5555666653 346788999999999997643
No 117
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=209.46 Aligned_cols=183 Identities=21% Similarity=0.367 Sum_probs=153.9
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
...+.+..+||+|+||.||+|.++.+|..+|+|.+.+. ..++++.+|+.++++++.++++++++.+.... -+
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--DL 103 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--DL 103 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc------chHHHHHHHHHHHHHcCCchhhhhhhhhccCC--ce
Confidence 45567788999999999999999999999999988754 34688999999999999999999998875433 38
Q ss_pred EEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|+|||||..|+..+.++. ..+++++.+..++...+.||+|||... -+|||||.-|||++-+ |..||+|||+|-.+.
T Consensus 104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~--KIHRDIKAGNILLNT~-G~AKLADFGVAGQLT 180 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK--KIHRDIKAGNILLNTD-GIAKLADFGVAGQLT 180 (502)
T ss_pred EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH--HHHhhcccccEEEccc-chhhhhhccccchhh
Confidence 999999999999998764 467999999999999999999999888 8999999999999966 689999999998887
Q ss_pred ccce-eeeecccCc----cccCCCccccccceeeeccccc
Q 027788 183 RAIR-RIRCWGRRS----SWRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 183 ~~~~-~~~~~~~~~----~~~~~~~~~~~~diws~gi~~~ 217 (219)
..-. +.+..|+|. +....-.|+.++|||||||.|+
T Consensus 181 DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaI 220 (502)
T KOG0574|consen 181 DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAI 220 (502)
T ss_pred hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhh
Confidence 6544 333344432 2234566889999999999886
No 118
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=3.2e-30 Score=201.37 Aligned_cols=179 Identities=26% Similarity=0.463 Sum_probs=146.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++.+..++..+|+|.+..... ..........|+.+++.++||||+++++++.. ...++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v 76 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIV 76 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc--cccccchhhhhhhccccccccccccccccccc--ccccccc
Confidence 4788999999999999999999999999999986542 22222334569999999999999999999965 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||++++++|.+++.....++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 77 ~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~--i~H~dikp~NIl~~~~-~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 77 MEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG--IVHRDIKPENILLDEN-GEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp EEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT--EEESSBSGGGEEESTT-SEEEESSGTTTEESTSTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccccccc
Confidence 999998899999886678999999999999999999999999 9999999999999955 6899999999976311111
Q ss_pred ------eeeecccCccccC-CCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRR-SCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~-~~~~~~~~diws~g 213 (219)
.+..+. ++++.. ...+..++|+||+|
T Consensus 154 ~~~~~~~~~~y~-aPE~~~~~~~~~~~~Di~slG 186 (260)
T PF00069_consen 154 NFNPFVGTPEYM-APEVLQQGKKYTRKSDIWSLG 186 (260)
T ss_dssp EBSSSSSSGGGS-CHHHHTTTSSBSTHHHHHHHH
T ss_pred cccccccccccc-ccccccccccccccccccccc
Confidence 212223 334444 77788889999999
No 119
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=8.4e-30 Score=200.32 Aligned_cols=180 Identities=18% Similarity=0.286 Sum_probs=143.5
Q ss_pred ceeeeeeeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+-+++.+.||+|+||.||+|... ..+..||+|.++... .......+.+|+.++++++|||++++++++.. +.
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC---SDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CC
Confidence 34589999999999999999764 456789999887542 33445678899999999999999999999854 45
Q ss_pred eEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++++|||+++++|.+++... ..+++..+..++.|++.|+.|||+++ ++|+||+|+|++++.+ +.++++|||.+..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--iiH~dikp~nili~~~-~~~~l~dfg~~~~ 156 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG--YVHKGLAAHKVLVNSD-LVCKISGFRRLQE 156 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeeccccHhhEEEcCC-CcEEECCCccccc
Confidence 688999999999999988764 46899999999999999999999999 9999999999999865 5899999998765
Q ss_pred ccccce-------eeeecccCccccCCCccccccceeeec
Q 027788 181 VGRAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...... .+..+.+|+ ......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG 195 (266)
T cd05064 157 DKSEAIYTTMSGKSPVLWAAPE-AIQYHHFSSASDVWSFG 195 (266)
T ss_pred ccccchhcccCCCCceeecCHH-HHhhCCccchhHHHHHH
Confidence 432211 111233333 33445677789999999
No 120
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=7.2e-30 Score=210.07 Aligned_cols=179 Identities=26% Similarity=0.433 Sum_probs=141.1
Q ss_pred eeeeeeeeccccceEEEEEEecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQE-----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDED 99 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 99 (219)
.+.+.+.||+|+||.||+|+... ++..||+|.++... .....+.+.+|+.+++.+ +|+||+++++.+...
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~- 114 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA---HTDEREALMSELKILSHLGQHKNIVNLLGACTHG- 114 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC---CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC-
Confidence 34888999999999999998543 34579999987543 234457788999999999 899999999998544
Q ss_pred CceEEEEeccccCCChHHHHHhC---------------------------------------------------------
Q 027788 100 RNTLNFITEVCTSGNLREYRKKH--------------------------------------------------------- 122 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~--------------------------------------------------------- 122 (219)
+.++++|||+++|+|.+++...
T Consensus 115 -~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (374)
T cd05106 115 -GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ 193 (374)
T ss_pred -CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence 4578899999999999887432
Q ss_pred -------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccceee-
Q 027788 123 -------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI- 188 (219)
Q Consensus 123 -------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~- 188 (219)
..+++..+..++.|++.|+.|||+++ ++||||||+||+++.+ +.++|+|||++..........
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--iiHrDLkp~Nil~~~~-~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN--CIHRDVAARNVLLTDG-RVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--EEeccCchheEEEeCC-CeEEEeeceeeeeccCCcceee
Confidence 13677888999999999999999999 9999999999999855 589999999998764432211
Q ss_pred -------eecccCccccCCCccccccceeeec
Q 027788 189 -------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 189 -------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..+.+|+ ......++.++|+||+|
T Consensus 271 ~~~~~~~~~y~aPE-~~~~~~~~~~~DvwSlG 301 (374)
T cd05106 271 KGNARLPVKWMAPE-SIFDCVYTVQSDVWSYG 301 (374)
T ss_pred ccCCCCccceeCHH-HhcCCCCCccccHHHHH
Confidence 1123333 33455678899999999
No 121
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=1.1e-29 Score=204.57 Aligned_cols=177 Identities=28% Similarity=0.471 Sum_probs=142.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcE----EEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIE----VAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
|++.+.||+|+||.||+|....++.. ||+|.++... .....+++..|+.+++.++||||+++++.+... .
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~ 82 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 82 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---C
Confidence 47889999999999999987666554 8999876432 345567888999999999999999999988643 2
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.+++++++++|+|.+++... ..++...+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+++..
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--iiH~dlkp~Nill~~~-~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR--LVHRDLAARNVLVKTP-QHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC--eeccccchhheEecCC-CcEEEccccccccc
Confidence 56799999999999988764 45888999999999999999999999 9999999999999865 58999999999877
Q ss_pred cccceeee--------ecccCccccCCCccccccceeeec
Q 027788 182 GRAIRRIR--------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ .+.+ ++......++.++|+||||
T Consensus 160 ~~~~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG 198 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYG 198 (316)
T ss_pred cCCCcceeccCCccceeecC-hHHhccCCCCchhhhHHHH
Confidence 54332111 1222 2344556677889999999
No 122
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=1.2e-29 Score=197.67 Aligned_cols=175 Identities=20% Similarity=0.354 Sum_probs=140.9
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++++.. ...++++|||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEEEeec
Confidence 46899999999999999999999999876332 34455778999999999999999999999854 45578899999
Q ss_pred cCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccceee-
Q 027788 111 TSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI- 188 (219)
Q Consensus 111 ~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~- 188 (219)
++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++..........
T Consensus 76 ~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~~~~~~~~ 152 (252)
T cd05084 76 QGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH--CIHRDLAARNCLVTEK-NVLKISDFGMSREEEDGVYAST 152 (252)
T ss_pred cCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEEcCC-CcEEECccccCccccccccccc
Confidence 999999988654 45889999999999999999999999 9999999999999865 589999999987654321110
Q ss_pred ------eecccCccccCCCccccccceeeec
Q 027788 189 ------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 189 ------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.....+++......++.++|+||+|
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 183 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFG 183 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHH
Confidence 1112223344455577789999999
No 123
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=8.6e-30 Score=202.19 Aligned_cols=176 Identities=20% Similarity=0.241 Sum_probs=143.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec--CCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD--EDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~~~lv~e 108 (219)
..|++|+++.||+|.. +++.||+|.++.... ......+.+.+|+.++++++||||+++++++.. ++...++++||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHK-GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEecccccc-ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 4689999999999986 688999999875432 233445778899999999999999999999866 44567889999
Q ss_pred cccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 109 VCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
|+++|+|.+++.....+++.....++.|++.++.+||.. + ++||||||+|++++.+ +.+|++|||+++.......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--~~Hrdlkp~nill~~~-~~~kl~dfg~~~~~~~~~~~ 179 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN--KPYKNLTSVSFLVTEN-YKLKIICHGLEKILSSPPFK 179 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC--CCCCcCChhhEEECCC-CcEEEcccchHhhhcccccc
Confidence 999999999998777899999999999999999999974 7 7899999999999866 6899999999986544321
Q ss_pred --eeeecccCccccCC--Cccccccceeeec
Q 027788 187 --RIRCWGRRSSWRRS--CTMRITRSLWTYT 213 (219)
Q Consensus 187 --~~~~~~~~~~~~~~--~~~~~~~diws~g 213 (219)
++..+.+| ++... ..++.++||||||
T Consensus 180 ~~~~~~y~aP-E~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 180 NVNFMVYFSY-KMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred ccCcccccCH-HHhhhccccccchhhhhHHH
Confidence 22233333 44433 5788899999999
No 124
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.8e-29 Score=199.71 Aligned_cols=174 Identities=17% Similarity=0.283 Sum_probs=139.1
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|+||.||++....+++.+|+|.+....... ......+..|++++++++||||+++.+.+. ....++++|||+++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~il~~l~hp~i~~~~~~~~--~~~~~~lv~e~~~g 77 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-KSGEKMALLEKEILEKVNSPFIVNLAYAFE--SKTHLCLVMSLMNG 77 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-chhhHHHHHHHHHHHhcCCCcEEEEEEEEe--cCCeEEEEEecCCC
Confidence 699999999999999999999999987543221 122344567999999999999999998884 45678899999999
Q ss_pred CChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee---
Q 027788 113 GNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR--- 187 (219)
Q Consensus 113 g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~--- 187 (219)
++|..++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~~l~Dfg~~~~~~~~~~~~~~ 154 (277)
T cd05607 78 GDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD--IVYRDMKPENVLLDDQ-GNCRLSDLGLAVELKDGKTITQR 154 (277)
T ss_pred CCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EEEccCChHhEEEcCC-CCEEEeeceeeeecCCCceeecc
Confidence 9998876543 35888999999999999999999999 9999999999999865 58999999999876543322
Q ss_pred --eeecccCccccCCCccccccceeeec
Q 027788 188 --IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+..+.+| +......++.++|+||+|
T Consensus 155 ~~~~~y~aP-E~~~~~~~~~~~DvwslG 181 (277)
T cd05607 155 AGTNGYMAP-EILKEEPYSYPVDWFAMG 181 (277)
T ss_pred CCCCCccCH-HHHccCCCCCchhHHHHH
Confidence 1223333 344455588889999999
No 125
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=218.76 Aligned_cols=189 Identities=22% Similarity=0.357 Sum_probs=156.0
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEG---IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
.++...+.++++.||.|.||.|++|+-+..+ ..||||-+|.-. .+++...|+.|+.++-+++||||+++.++..
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy---tekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc---cHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 3455678899999999999999999876555 579999998654 5778899999999999999999999999995
Q ss_pred cCCCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
. ...+.+++|||++|+|..|++.+ +.+..-++.-+++.|+.|+.||.+.+ ++||||..+|||++.+. .+|++||
T Consensus 701 k--s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~--YVHRDLAARNILVNsnL-vCKVsDF 775 (996)
T KOG0196|consen 701 K--SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN--YVHRDLAARNILVNSNL-VCKVSDF 775 (996)
T ss_pred c--CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC--chhhhhhhhheeeccce-EEEeccc
Confidence 4 45588899999999999998754 67888999999999999999999999 99999999999999774 7899999
Q ss_pred ccceeccccc-eeeeecc--cCcccc-----CCCccccccceeeec--ccc
Q 027788 176 GVAAIVGRAI-RRIRCWG--RRSSWR-----RSCTMRITRSLWTYT--RLG 216 (219)
Q Consensus 176 g~a~~~~~~~-~~~~~~~--~~~~~~-----~~~~~~~~~diws~g--i~~ 216 (219)
|+++.+..+. ...+..| .|..|. .-+.++.+||+||+| +|.
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWE 826 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 826 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEE
Confidence 9999885543 2222222 234443 344577789999999 564
No 126
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2e-29 Score=206.45 Aligned_cols=183 Identities=27% Similarity=0.355 Sum_probs=144.3
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC-
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR- 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~- 100 (219)
...+| .+.+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 19 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 95 (359)
T cd07876 19 VLKRY-QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ--NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL 95 (359)
T ss_pred hhhce-EEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc--chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc
Confidence 34566 777999999999999999999999999999874432 33445778899999999999999999998854332
Q ss_pred ---ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 101 ---NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 101 ---~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
..++++|||+++ ++...+. ..++...+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~--ivHrDlkp~NIl~~~~-~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEecCCC
Confidence 357899999974 5655553 25788999999999999999999999 9999999999999866 6899999999
Q ss_pred ceeccccce-----eeeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+........ ++..+.+| +......++.++|+||+|+
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aP-E~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAP-EVILGMGYKENVDIWSVGC 210 (359)
T ss_pred ccccccCccCCCCcccCCCCCc-hhccCCCCCcchhhHHHHH
Confidence 976543221 12223333 3445566788899999993
No 127
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=2.1e-29 Score=202.14 Aligned_cols=178 Identities=22% Similarity=0.400 Sum_probs=147.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||++.+..++..+++|.++... .......+.+|++++++++||||+++++.+.. .+.++++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 77 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISIC 77 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEE
Confidence 478899999999999999999999999999887542 34455678899999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++++|.+++.....+++..+..++.|++.++.|||+ .+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHK--IMHRDVKPSNILVNSR-GEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EEECCCChHHEEEecC-CcEEEccCCCcccccccc
Confidence 9999999999999877789999999999999999999997 57 9999999999999865 589999999987654332
Q ss_pred e----eeeecccCccccCCCccccccceeeec
Q 027788 186 R----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+|+ ......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~aPE-~~~~~~~~~~~DiwslG 185 (308)
T cd06615 155 ANSFVGTRSYMSPE-RLQGTHYTVQSDIWSLG 185 (308)
T ss_pred cccCCCCcCccChh-HhcCCCCCccchHHHHH
Confidence 2 122233333 34455677789999999
No 128
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=2.3e-29 Score=200.02 Aligned_cols=180 Identities=28% Similarity=0.411 Sum_probs=138.7
Q ss_pred eeeeeeeccccceEEEEEEecC-CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh---CCCCceEEEEEEec---CC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE-EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL---ANKNIISLHYVWRD---ED 99 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~---~~ 99 (219)
|++.+.||+|+||.||+|.+.. .+..||+|.++..... ......+.+|+.+++.+ +||||+++++++.. ..
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 4778999999999999999854 4688999998765432 22234456677777665 69999999998852 23
Q ss_pred CceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 100 RNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++++||+++ ++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--iiH~dlkp~Nil~~~~-~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSS-GQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEcCC-CCEEEccccc
Confidence 456889999996 6888887643 35889999999999999999999999 9999999999999866 5899999999
Q ss_pred ceeccccce-----eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+........ ++..+.+|+ ......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DiwslG 196 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPE-VLLQSSYATPVDLWSVG 196 (290)
T ss_pred eEeccCCcccccccccccccChH-HHhCCCCCCccchHHHH
Confidence 987654322 122233333 33455677889999999
No 129
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.6e-31 Score=197.76 Aligned_cols=178 Identities=24% Similarity=0.400 Sum_probs=153.9
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCC----CHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD----DPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 105 (219)
+.+|.|..+.|-+|.++.++.++|+|++....... .-...+....|+.+|+++ .||+|+++.+++ +...++++
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y--es~sF~Fl 100 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY--ESDAFVFL 100 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec--cCcchhhh
Confidence 56999999999999999999999999998744332 223456678899999988 599999999999 55677889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|.|.++.|.|++++.+.-.+++...++++.|+..++.|+|..+ |+||||||+||+++.+. +++|+|||+|..+.++.
T Consensus 101 VFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~--IVHRDLKpENILlddn~-~i~isDFGFa~~l~~Ge 177 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN--IVHRDLKPENILLDDNM-NIKISDFGFACQLEPGE 177 (411)
T ss_pred hhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh--hhhcccChhheeecccc-ceEEeccceeeccCCch
Confidence 9999999999999998888999999999999999999999999 99999999999999775 89999999999999988
Q ss_pred eeeeecccCcc---------c-cCCCccccccceeeec
Q 027788 186 RRIRCWGRRSS---------W-RRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~~~~~~~~~---------~-~~~~~~~~~~diws~g 213 (219)
.-...+|+|.. | -..++|+..-|+|+.|
T Consensus 178 kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~G 215 (411)
T KOG0599|consen 178 KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACG 215 (411)
T ss_pred hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHH
Confidence 75555666542 3 3477788889999999
No 130
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=9e-30 Score=204.91 Aligned_cols=176 Identities=24% Similarity=0.355 Sum_probs=138.1
Q ss_pred eeeeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 30 NELLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+++||+|+||.||+|.+. .+++.+|+|.++.... ...+.+|+.++++++||||+++++.+.......+++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEE
Confidence 468999999999999865 4678999998864321 23466899999999999999999998776677889999
Q ss_pred ccccCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe---CCCCcEEEecc
Q 027788 108 EVCTSGNLREYRKKH---------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN---GNTGQVKIGDL 175 (219)
Q Consensus 108 e~~~~g~L~~~~~~~---------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~---~~~~~~~l~df 175 (219)
|+++ ++|.+++... ..+++..+..++.|++.|+.|||+++ ++||||||+||+++ ...+.+||+||
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9996 5777765422 24788999999999999999999999 99999999999994 23357999999
Q ss_pred ccceeccccce---------eeeecccCccccCCCccccccceeeecc
Q 027788 176 GVAAIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 176 g~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
|+++....... ++..+.+|+.+.....++.++|+||+|+
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 204 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC 204 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHH
Confidence 99987644321 1223444544545566778899999993
No 131
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=8.1e-30 Score=207.45 Aligned_cols=183 Identities=27% Similarity=0.382 Sum_probs=145.0
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED--- 99 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 99 (219)
..+| .+.+.||+|+||.||+|.+..++..||+|.+..... .....+.+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 14 PERY-QNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ--SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhh-hhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh--hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3455 677999999999999999999999999998874322 2234466778999999999999999988774322
Q ss_pred -CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 -RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 -~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
....+++++++ +++|..++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrdikp~Nil~~~~-~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG--IIHRDLKPSNVAVNED-CELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCChhhEEECCC-CCEEEcCCccc
Confidence 23467899988 678887765 346999999999999999999999999 9999999999999865 58999999999
Q ss_pred eeccccce---eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ ++..+.+|+.+.....++.++||||+|
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 203 (343)
T cd07878 166 RQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 203 (343)
T ss_pred eecCCCcCCccccccccCchHhcCCccCCchhhhHhHH
Confidence 87654322 223344444444445677789999999
No 132
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.7e-29 Score=198.46 Aligned_cols=183 Identities=25% Similarity=0.399 Sum_probs=147.3
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
.+..+| .+.+.||+|+||.||+|.+..+++.+|+|.+.... ......+.+|+.++++++|||++++++.+.. .
T Consensus 6 ~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~--~ 78 (267)
T cd06646 6 NPQHDY-ELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSLIQQEIFMVKECKHCNIVAYFGSYLS--R 78 (267)
T ss_pred Cchhhc-chhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHHHHHHHHHHHhcCCCCeeeeeEEEEe--C
Confidence 344455 78899999999999999999999999999987442 2233567889999999999999999998854 3
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
+.++++|||+++++|.+++.....+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++|+|||++..
T Consensus 79 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~~~ 155 (267)
T cd06646 79 EKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG--KMHRDIKGANILLTDN-GDVKLADFGVAAK 155 (267)
T ss_pred CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CCEEECcCcccee
Confidence 568889999999999998877778899999999999999999999999 9999999999999855 5899999999987
Q ss_pred ccccce------eeeecccCcccc--CCCccccccceeeec
Q 027788 181 VGRAIR------RIRCWGRRSSWR--RSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~------~~~~~~~~~~~~--~~~~~~~~~diws~g 213 (219)
...... ++..+.+|+... ....++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G 196 (267)
T cd06646 156 ITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVG 196 (267)
T ss_pred ecccccccCccccCccccCHhHcccccCCCCcchhhHHHHH
Confidence 643321 112233333221 233456679999999
No 133
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=3.7e-29 Score=196.32 Aligned_cols=183 Identities=25% Similarity=0.468 Sum_probs=149.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeeccc-CCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTF-CDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|++.+.||+|+||.||+|.+..++..+++|.+..... .........+.+|++++++++|+|++++++.+.......+++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 4788999999999999999999999999998754321 113345578889999999999999999999887666677889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++|++++++|.+++.....+++.....++.|++.++.+||+++ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECcccccccccccc
Confidence 9999999999998877667899999999999999999999999 9999999999999865 589999999998654321
Q ss_pred e---------eeeecccCccccCCCccccccceeeec
Q 027788 186 R---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+ .+++.......+.++|+||+|
T Consensus 161 ~~~~~~~~~~~~~~y-~aPE~~~~~~~~~~~Di~slG 196 (264)
T cd06653 161 MSGTGIKSVTGTPYW-MSPEVISGEGYGRKADVWSVA 196 (264)
T ss_pred ccCccccccCCcccc-cCHhhhcCCCCCccccHHHHH
Confidence 1 11112 233444455567789999999
No 134
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=2.3e-29 Score=206.42 Aligned_cols=183 Identities=25% Similarity=0.337 Sum_probs=144.7
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC--
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED-- 99 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-- 99 (219)
..++| ++.+.||+|+||.||+|++..+++.||+|.+..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~ 98 (364)
T cd07875 22 VLKRY-QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98 (364)
T ss_pred hhcce-eEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc--CchhHHHHHHHHHHHHhcCCCCccccceeecccccc
Confidence 34565 788999999999999999999999999999875432 3344567889999999999999999998875432
Q ss_pred --CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 100 --RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 100 --~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++++|||+++ +|...+.. .++...+..++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||+
T Consensus 99 ~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~-~~~kL~DfG~ 172 (364)
T cd07875 99 EEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 172 (364)
T ss_pred cccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEECCC-CcEEEEeCCC
Confidence 2357899999974 67666643 4788899999999999999999999 9999999999999866 5899999999
Q ss_pred ceeccccce-----eeeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++....... ++..+.+ ++......++.++|+||+|+
T Consensus 173 a~~~~~~~~~~~~~~t~~y~a-PE~~~~~~~~~~~DiwSlG~ 213 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGC 213 (364)
T ss_pred ccccCCCCcccCCcccCCcCC-HHHHhCCCCCchhhHHhHHH
Confidence 987644322 1222233 34445566788899999993
No 135
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=4.4e-29 Score=198.22 Aligned_cols=180 Identities=18% Similarity=0.292 Sum_probs=144.3
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+..+.||+|+||.||+|.+..+++.+|+|.+...... .......+.+|+.++++++|++++.+.+.+.. .+.++++|
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGESMALNEKQILEKVNSRFVVSLAYAYET--KDALCLVL 79 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-chHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CCEEEEEE
Confidence 5668899999999999999999999999998754332 22333567789999999999999999988854 45688999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--iiH~dikp~Nil~~~~-~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER--IVYRDLKPENILLDDH-GHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHEEECCC-CCEEEeeccceeecCCCc
Confidence 999999999887543 35889999999999999999999999 9999999999999865 589999999997654332
Q ss_pred e-----eeeecccCccccCCCccccccceeeecc
Q 027788 186 R-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. ++..+.+| +......++.++|+||+|+
T Consensus 157 ~~~~~~g~~~y~aP-E~~~~~~~~~~~DiwslG~ 189 (285)
T cd05630 157 TIKGRVGTVGYMAP-EVVKNERYTFSPDWWALGC 189 (285)
T ss_pred cccCCCCCccccCh-HHHcCCCCCCccccHHHHH
Confidence 2 11222233 3444556788899999993
No 136
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.3e-29 Score=199.06 Aligned_cols=182 Identities=24% Similarity=0.398 Sum_probs=147.2
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
..+| .+.+.||+|+||.||+|.+..+++.+|+|.++... ......+.+|+.+++.++|||++++++.+.. .+.
T Consensus 8 ~~~~-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~ 80 (267)
T cd06645 8 QEDF-ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDK 80 (267)
T ss_pred HHHH-HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCE
Confidence 3455 77789999999999999999999999999987542 2334567889999999999999999998854 456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++++||+++++|.+++...+.+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG--KMHRDIKGANILLTDN-GHVKLADFGVSAQIT 157 (267)
T ss_pred EEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEECcceeeeEcc
Confidence 8889999999999999887778999999999999999999999999 9999999999999855 589999999987654
Q ss_pred ccce------eeeecccCcccc--CCCccccccceeeecc
Q 027788 183 RAIR------RIRCWGRRSSWR--RSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~--~~~~~~~~~diws~gi 214 (219)
.... ++..+.+|+... ....++.++|+||+|+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~ 197 (267)
T cd06645 158 ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGI 197 (267)
T ss_pred CcccccccccCcccccChhhhccccCCCCCchhhhHHHHH
Confidence 3221 112233333221 2344667899999993
No 137
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=5.3e-29 Score=197.75 Aligned_cols=180 Identities=17% Similarity=0.290 Sum_probs=144.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+..+.||+|+||.||.|.+..+++.+|+|.+...... .......+.+|+++++.++|+|++.+.+.+.. .+.++++|
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLVL 79 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEEE
Confidence 4558899999999999999999999999998754322 22334557789999999999999999888844 45688999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++++|..++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--iiH~dikp~Nili~~~-~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN--TVYRDLKPENILLDDY-GHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEECCC-CCEEEecCCcceecCCCC
Confidence 999999998877543 36899999999999999999999999 9999999999999865 589999999997654322
Q ss_pred e-----eeeecccCccccCCCccccccceeeecc
Q 027788 186 R-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. ++..+.+| +......++.++|+||+|+
T Consensus 157 ~~~~~~g~~~~~aP-E~~~~~~~~~~~Di~slG~ 189 (285)
T cd05632 157 SIRGRVGTVGYMAP-EVLNNQRYTLSPDYWGLGC 189 (285)
T ss_pred cccCCCCCcCccCh-HHhcCCCCCcccchHHHHH
Confidence 2 11222233 3444566788899999993
No 138
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=2.3e-29 Score=221.57 Aligned_cols=182 Identities=20% Similarity=0.303 Sum_probs=144.4
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
++| .+.++||+|+||.||+|++..+++.||+|.+..... ......+++.+|+.++++++|||++++++++.. .+..
T Consensus 2 grY-eIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~l 77 (932)
T PRK13184 2 QRY-DIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-ENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPV 77 (932)
T ss_pred CCe-EEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc-cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEE
Confidence 455 788999999999999999999999999999875332 234556789999999999999999999998844 4568
Q ss_pred EEEeccccCCChHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEE
Q 027788 104 NFITEVCTSGNLREYRKKH-----------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKI 172 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-----------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l 172 (219)
+++|||+++++|.+++... ...+...+..++.|++.|+.|||+.+ ++||||||+||+++.+ +.++|
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G--IIHRDLKPeNILLd~d-g~vKL 154 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG--VLHRDLKPDNILLGLF-GEVVI 154 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchheEEEcCC-CCEEE
Confidence 8999999999999887531 13456678889999999999999999 9999999999999865 68999
Q ss_pred eccccceeccccce------------------------eeeecccCccccCCCccccccceeeec
Q 027788 173 GDLGVAAIVGRAIR------------------------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 173 ~dfg~a~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+|||+++....... ++..+.+| +......++.++|+||+|
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP-E~l~g~~~S~kSDIWSLG 218 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP-ERLLGVPASESTDIYALG 218 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH-HHhcCCCCCcHhHHHHHH
Confidence 99999987622110 11112222 234455577789999999
No 139
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-30 Score=185.17 Aligned_cols=178 Identities=29% Similarity=0.525 Sum_probs=147.3
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
++||+|.||+||+|++..+++.||+|.+..... ++......++||-+++.++|.||++++++...+++ +-+|.|+|
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddd--degvpssalreicllkelkhknivrl~dvlhsdkk--ltlvfe~c 83 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFC 83 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCC--CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCce--eEEeHHHh
Confidence 689999999999999999999999999876543 44444667889999999999999999999866554 77799999
Q ss_pred cCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccceee-
Q 027788 111 TSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI- 188 (219)
Q Consensus 111 ~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~- 188 (219)
. .+|..+..+ .+.++.+.+..++.|++.|+.++|+++ ++||||||.|++++.+ |.+|++|||+++.++.+...-
T Consensus 84 d-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn--vlhrdlkpqnllin~n-gelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 84 D-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN--VLHRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred h-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh--hhhccCCcceEEeccC-CcEEecccchhhhcCCceEeee
Confidence 6 588887754 467999999999999999999999999 9999999999999977 689999999999888776421
Q ss_pred ----eecccCc-cccCCCccccccceeeec-ccc
Q 027788 189 ----RCWGRRS-SWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 189 ----~~~~~~~-~~~~~~~~~~~~diws~g-i~~ 216 (219)
+.|.+|+ -......|+.+-|+||-| |+|
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifa 193 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHH
Confidence 1233333 234555688889999999 654
No 140
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=2.5e-29 Score=199.19 Aligned_cols=180 Identities=26% Similarity=0.402 Sum_probs=146.4
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|++|.||+|.+..+++.||+|.+..... .....+.+.+|+.+++.++|+|++++++.+.. ...++++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED--DPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc--CccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 4677899999999999999999999999999875432 22233567889999999999999999999854 4568889
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|..++.....+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN--CIHRDVKPENILITKQ-GQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCChhhEEEcCC-CcEEECccccceecCCCcc
Confidence 999998888877766667999999999999999999999999 9999999999999865 5899999999987755431
Q ss_pred ------eeeecccCccccCCCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+.+|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 188 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIG 188 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHH
Confidence 222334444433334567789999999
No 141
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=4.1e-29 Score=198.76 Aligned_cols=180 Identities=19% Similarity=0.296 Sum_probs=148.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|++|.||++.+..+++.+|+|.++..... .....+.+.+|++++++++||||+++++++.. ...++++
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v 79 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-KLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--DSNLYLV 79 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCeEEEE
Confidence 46779999999999999999999999999998754321 23455778899999999999999999998854 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|.+++.....++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~~~~~~~~~~ 156 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD--IVYRDLKPENLLLDSD-GYIKITDFGFAKRVKGRTY 156 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCC-CCEEEeeCCCccccCCCCC
Confidence 999999999999887778999999999999999999999999 9999999999999865 6899999999987654421
Q ss_pred ---eeeecccCccccCCCccccccceeeec
Q 027788 187 ---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+|+ .......+.++|+||+|
T Consensus 157 ~~~~~~~y~aPE-~~~~~~~~~~~Di~slG 185 (290)
T cd05580 157 TLCGTPEYLAPE-IILSKGYGKAVDWWALG 185 (290)
T ss_pred CCCCCccccChh-hhcCCCCCccccHHHHH
Confidence 112233333 33344566779999999
No 142
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.96 E-value=1.7e-29 Score=197.98 Aligned_cols=181 Identities=24% Similarity=0.389 Sum_probs=141.0
Q ss_pred eeeeeeccccceEEEEEEec----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 28 RYNELLGSGAVKKVYRAFDQ----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
++.+.||.|.||.||+|... ..+..|+||.++... .....+.+.+|++.+++++||||+++++++...+ .+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~--~~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS---SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE--PL 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS---SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--SE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc---ccccceeeeecccccccccccccccccccccccc--cc
Confidence 46789999999999999876 456789999986432 4455788999999999999999999999997433 37
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++++||+++|+|.+++... ..++...+..++.|++.|+.|||+.+ ++|++|+++||+++.+ +.+||+|||++...
T Consensus 77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~--iiH~~l~~~nill~~~-~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN--IIHGNLSPSNILLDSN-GQVKLSDFGLSRPI 153 (259)
T ss_dssp EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT--EEEST-SGGGEEEETT-TEEEEESTTTGEET
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccc-cccccccccccccc
Confidence 8899999999999998775 67899999999999999999999999 9999999999999966 58999999999887
Q ss_pred cccce--------eeeecccCccccCCCccccccceeeec--cccc
Q 027788 182 GRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 182 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g--i~~~ 217 (219)
..... ....+.+| +......++.++|||||| +|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~aP-E~~~~~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 154 SEKSKYKNDSSQQLPLRYLAP-EVLKDGEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp TTSSSEEESTTSESGGGGS-H-HHHHHSEESHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 32211 11112222 222334477889999999 5443
No 143
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=3.6e-29 Score=207.27 Aligned_cols=178 Identities=25% Similarity=0.370 Sum_probs=139.1
Q ss_pred eeeeeeeccccceEEEEEEecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEE-----GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDR 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 100 (219)
+.+.++||+|+||.||+|++... +..||+|.++... .....+.+.+|+.+++++. ||||+++++++.. .
T Consensus 39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~--~ 113 (400)
T cd05105 39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA---RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK--S 113 (400)
T ss_pred eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--C
Confidence 37889999999999999986433 3479999886442 3344577899999999996 9999999999954 4
Q ss_pred ceEEEEeccccCCChHHHHHhC----------------------------------------------------------
Q 027788 101 NTLNFITEVCTSGNLREYRKKH---------------------------------------------------------- 122 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~---------------------------------------------------------- 122 (219)
..++++|||+++|+|.+++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 5688999999999998876432
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe
Q 027788 123 --------------------------------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN 164 (219)
Q Consensus 123 --------------------------------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~ 164 (219)
..+++..+..++.|++.|+.|||..+ ++|+||||+||+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivH~dikp~Nill~ 271 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN--CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChHhEEEe
Confidence 13567778899999999999999999 99999999999998
Q ss_pred CCCCcEEEeccccceeccccceee--------eecccCccccCCCccccccceeeec
Q 027788 165 GNTGQVKIGDLGVAAIVGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 165 ~~~~~~~l~dfg~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+ +.++|+|||+++......... ..+.+|+ ......++.++|+||||
T Consensus 272 ~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DiwSlG 326 (400)
T cd05105 272 QG-KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE-SIFDNLYTTLSDVWSYG 326 (400)
T ss_pred CC-CEEEEEeCCcceeccccccccccCCcCCCcceEChh-hhcCCCCCchhhHHHHH
Confidence 65 589999999998764332110 1123333 33445577789999999
No 144
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.96 E-value=8e-29 Score=193.18 Aligned_cols=179 Identities=24% Similarity=0.387 Sum_probs=147.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||+|....+++.+++|.+..... .......+..|+.+++.++|||++++++.+.. ....+++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08529 3 EILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--NRREREEAIDEARVLAKLDSSYIIRYYESFLD--KGKLNIVM 78 (256)
T ss_pred eEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--CHHHHHHHHHHHHHHHhcCCCCeehheeeecc--CCEEEEEE
Confidence 567899999999999999999999999999875543 34556788899999999999999999998854 45688999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++++|.+++... ..++...+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++.......
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~h~dl~~~nili~~~-~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK--ILHRDIKSLNLFLDAY-DNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEeCC-CCEEEcccccceeccCcc
Confidence 999999999988653 56889999999999999999999999 9999999999999866 589999999998765543
Q ss_pred eee-----eecccCccccCCCccccccceeeec
Q 027788 186 RRI-----RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~-----~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... .....++++.....++.++|+||+|
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 188 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALG 188 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHH
Confidence 211 1112233445555677789999999
No 145
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=2.8e-29 Score=197.16 Aligned_cols=182 Identities=23% Similarity=0.366 Sum_probs=147.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC--CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
|+..+.||+|++|.||.+.+..++..+|+|.+...... ......+.+..|+.++++++|+|++++++.+. +.+.++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~ 79 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC--EDSHFN 79 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec--cCCeEE
Confidence 36678999999999999999999999999998743321 12234578899999999999999999999984 445688
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+++|++++++|.+++.....+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+...++|+|||.+......
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~--i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ--IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 89999999999999887778999999999999999999999999 9999999999999866446899999999877554
Q ss_pred cee----------eeecccCccccCCCccccccceeeec
Q 027788 185 IRR----------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~----------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... +..+..| +......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~P-E~~~~~~~~~~~Dv~slG 195 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAP-EVLRGEQYGRSCDVWSVG 195 (268)
T ss_pred cccCCccccccccccceeCH-hHhccCCCCcccchHHHH
Confidence 221 1122233 333445677889999999
No 146
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=6.6e-30 Score=209.80 Aligned_cols=185 Identities=22% Similarity=0.317 Sum_probs=149.3
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.....+.++||+|-||.|.+|+- ..+..||+|.++... .......|+.|+++|.+|+||||++++++|...+. +
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a---~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP--i 610 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDA---TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP--L 610 (807)
T ss_pred hhheehhhhhcCcccceeEEEEe-cCceEEEEeecCccc---chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc--h
Confidence 44457888999999999999984 446899999988553 33445889999999999999999999999976554 8
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++++||+++|+|.+++..+ +.........++.||++|++||.+.+ ++||||.+.|+|++.+. ++||+|||+++.+
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n--fVHrd~a~rNcLv~~e~-~iKiadfgmsR~l 687 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN--FVHRDLATRNCLVDGEF-TIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc--hhhccccccceeecCcc-cEEecCccccccc
Confidence 8899999999999999877 34455667779999999999999999 99999999999999874 8999999999977
Q ss_pred cccceeee--ecccCcccc-----CCCccccccceeeec--cccc
Q 027788 182 GRAIRRIR--CWGRRSSWR-----RSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 182 ~~~~~~~~--~~~~~~~~~-----~~~~~~~~~diws~g--i~~~ 217 (219)
-+...... ...-|-.|+ -...++++||+|++| +|.+
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~ 732 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEV 732 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHH
Confidence 66543111 111233342 356688899999999 7764
No 147
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=3.2e-29 Score=204.86 Aligned_cols=183 Identities=25% Similarity=0.343 Sum_probs=145.1
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC--
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED-- 99 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-- 99 (219)
..++| ++.+.||+|+||.||+|.+..+++.+|+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 15 VLKRY-QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhce-eEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc--ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 34566 777999999999999999999999999998874432 3444577888999999999999999999885432
Q ss_pred --CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 100 --RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 100 --~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++++||++++ ++.+.+.. .++...+..++.|++.||.|||+++ ++||||||+||+++.+ +.++|+|||+
T Consensus 92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDikp~Nill~~~-~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEECCC-CCEEEeeCcc
Confidence 2357899999974 66665543 5788999999999999999999999 9999999999999866 5899999999
Q ss_pred ceeccccce-----eeeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++....... ++..+.+| +......++.++|+||+|+
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aP-E~~~~~~~~~~~DiwslG~ 206 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAP-EVILGMGYKENVDIWSVGC 206 (355)
T ss_pred cccCCCccccCCccccCCccCH-HHHcCCCCCchhhHHHHHH
Confidence 987644322 22223333 3445566788899999993
No 148
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=4.3e-29 Score=198.17 Aligned_cols=181 Identities=28% Similarity=0.395 Sum_probs=139.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh---CCCCceEEEEEEecC---CC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL---ANKNIISLHYVWRDE---DR 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~~---~~ 100 (219)
|.+.+.||+|+||.||+|.+..+++.||+|.++..... ......+.+|+.+++.+ +||||+++++++... ..
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 36779999999999999999999999999998764322 11123345677777655 799999999887532 23
Q ss_pred ceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
..+++++|+++ ++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dikp~Nili~~~-~~~kl~dfg~~ 155 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSG-GQVKLADFGLA 155 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccCcc
Confidence 56789999997 5888777643 34899999999999999999999999 9999999999999865 58999999999
Q ss_pred eeccccce-----eeeecccCccccCCCccccccceeeecc
Q 027788 179 AIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 179 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
........ ++..+.+|+ ......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~DiwslG~ 195 (288)
T cd07863 156 RIYSCQMALTPVVVTLWYRAPE-VLLQSTYATPVDMWSVGC 195 (288)
T ss_pred ccccCcccCCCccccccccCch-HhhCCCCCCcchhhhHHH
Confidence 87654322 122233343 334556788899999993
No 149
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96 E-value=9.8e-29 Score=194.15 Aligned_cols=183 Identities=26% Similarity=0.463 Sum_probs=148.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|+||.||+|.+..++..+++|.+...... ........+.+|+.+++.++|||++++++.+.......+++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 36778999999999999999999999999988754321 12344567889999999999999999999887655677889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++|++++++|.+++.....+++.....++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 84 ~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--i~H~~l~p~nil~~~~-~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 84 FMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM--IVHRDIKGANILRDSA-GNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCCCcccccccc
Confidence 9999999999998887777899999999999999999999999 9999999999999865 589999999997654321
Q ss_pred e---------eeeecccCccccCCCccccccceeeec
Q 027788 186 R---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ....+.+| +......++.++|+||+|
T Consensus 161 ~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 196 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSP-EVISGEGYGRKADVWSLG 196 (266)
T ss_pred ccCCccccCCccccccCH-HHhCCCCCCchhhhHHHH
Confidence 1 11112233 333445567789999999
No 150
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96 E-value=3.3e-29 Score=200.34 Aligned_cols=180 Identities=25% Similarity=0.403 Sum_probs=144.1
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|+||.||+|.+..++..||+|.++.... ......+.+|+.+++.++||||+++++++. ..+.+
T Consensus 6 ~~y-~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~--~~~~~ 79 (301)
T cd07873 6 ETY-IKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLKHANIVTLHDIIH--TEKSL 79 (301)
T ss_pred cce-EEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc---cCchhHHHHHHHHHHhcCCCCcceEEEEEe--cCCeE
Confidence 344 677999999999999999999999999999875432 222345678999999999999999999985 44568
Q ss_pred EEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++|||++ ++|.+++.. ...+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~~~ 155 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK--VLHRDLKPQNLLINER-GELKLADFGLARAKS 155 (301)
T ss_pred EEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHHHEEECCC-CcEEECcCcchhccC
Confidence 89999997 588877654 346889999999999999999999999 9999999999999865 589999999997654
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .+..+.+|+.+.....++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 192 (301)
T cd07873 156 IPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVG 192 (301)
T ss_pred CCCCcccccceeecccCcHHHhCCCCCccHHHHHHHH
Confidence 3221 222334444444455677789999999
No 151
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.96 E-value=8.9e-29 Score=196.94 Aligned_cols=182 Identities=24% Similarity=0.434 Sum_probs=146.7
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+.++| ++.+.||+|+||.||+|.+..++..+++|.+... .....+.+..|+.+++.++|+|++++.+.+..+ .
T Consensus 10 ~~~~y-~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~ 82 (292)
T cd06644 10 PNEVW-EIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD--G 82 (292)
T ss_pred cchhh-hhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC--C
Confidence 44455 8889999999999999999999999999998744 455567888999999999999999999988544 4
Q ss_pred eEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++++|||+++++|..++.. ...+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~~~ 159 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK--IIHRDLKAGNVLLTLD-GDIKLADFGVSAK 159 (292)
T ss_pred eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC--eeecCCCcceEEEcCC-CCEEEccCcccee
Confidence 68889999999999877643 456899999999999999999999999 9999999999999855 6899999999876
Q ss_pred ccccce------eeeecccCcccc----CCCccccccceeeec
Q 027788 181 VGRAIR------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
...... ....+.+|+... ....++.++|+||+|
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 202 (292)
T cd06644 160 NVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 202 (292)
T ss_pred ccccccccceecCCccccCceeeccccccCCCCCchhhhHhHH
Confidence 533221 112233443332 234456679999999
No 152
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=222.09 Aligned_cols=186 Identities=22% Similarity=0.335 Sum_probs=148.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCc-----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGI-----EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
-....++..||+|.||.||.|....... .||+|.++... +......|++|..++++++||||+++++++..+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~---~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS---SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 3444677899999999999998764433 38888776443 567779999999999999999999999999875
Q ss_pred CCceEEEEeccccCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH-------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~-------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
.. .++++|||++|+|.++++.. ..++....+.++.+|+.|+.||+++. ++||||..+|+|++.. ..+|
T Consensus 768 ~~--~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~--fvHRDLAaRNCLL~~~-r~VK 842 (1025)
T KOG1095|consen 768 GP--PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH--FVHRDLAARNCLLDER-RVVK 842 (1025)
T ss_pred CC--cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC--CcCcchhhhheeeccc-CcEE
Confidence 54 55699999999999999765 24788899999999999999999999 9999999999999966 4899
Q ss_pred Eeccccceeccccce-eeeec-ccCcccc-----CCCccccccceeeec--cccc
Q 027788 172 IGDLGVAAIVGRAIR-RIRCW-GRRSSWR-----RSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 172 l~dfg~a~~~~~~~~-~~~~~-~~~~~~~-----~~~~~~~~~diws~g--i~~~ 217 (219)
|+|||+|+.+....- +.... .-|..|+ ...-++.++|||||| +|.+
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEi 897 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEI 897 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHH
Confidence 999999995543332 11111 1233443 346788999999999 6654
No 153
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=1.3e-28 Score=193.71 Aligned_cols=179 Identities=23% Similarity=0.350 Sum_probs=144.6
Q ss_pred eeeeeeeeccccceEEEEEEecCCCc---EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGI---EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.+++.+.||+|+||.||+|....+++ .||+|.++... .....+.+..|+.+++.++|||++++++.+.. ...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SRP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCcCcceEEEEECC--CCc
Confidence 35899999999999999999876664 59999887442 35556789999999999999999999998844 455
Q ss_pred EEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.+++|||+++++|.+++.. .+.++...+..++.|++.|+.+||+++ ++|+||+|+|++++.+ +.++++|||++...
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g--~~H~dl~p~nili~~~-~~~kl~dfg~~~~~ 156 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRFL 156 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccChheEEEcCC-CcEEECCCcccccc
Confidence 7889999999999998865 356889999999999999999999999 9999999999999865 58999999998765
Q ss_pred ccccee---e--------eecccCccccCCCccccccceeeec
Q 027788 182 GRAIRR---I--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~---~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...... . ..+.+ ++......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DvwslG 198 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTA-PEAIAYRKFTSASDVWSYG 198 (269)
T ss_pred ccCccccccccccCCCcceeecC-HhHhccCcccchhhhhhhH
Confidence 432210 0 01223 3444556677789999999
No 154
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=4.5e-29 Score=200.71 Aligned_cols=176 Identities=24% Similarity=0.360 Sum_probs=137.3
Q ss_pred eeeeeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 29 YNELLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 29 ~~~~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
.+.+||+|+||.||+|+.. .++..+|+|.+.... ....+.+|+.++++++|||++++++++.......++++
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCC------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence 3468999999999999864 356889999876332 12346789999999999999999999877677788999
Q ss_pred eccccCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe---CCCCcEEEec
Q 027788 107 TEVCTSGNLREYRKKH---------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN---GNTGQVKIGD 174 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~---------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~---~~~~~~~l~d 174 (219)
+||++ ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||++. .+.+.++|+|
T Consensus 79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 79 FDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred EeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC--EEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 99996 4776665321 24788889999999999999999999 99999999999994 2335799999
Q ss_pred cccceeccccce---------eeeecccCccccCCCccccccceeeec
Q 027788 175 LGVAAIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 175 fg~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
||+++....... .+..+.+|+.+.....++.++|+||+|
T Consensus 156 fG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 203 (317)
T cd07867 156 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG 203 (317)
T ss_pred ccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHH
Confidence 999987644321 122344555454556677889999999
No 155
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96 E-value=4.1e-29 Score=197.91 Aligned_cols=179 Identities=25% Similarity=0.420 Sum_probs=143.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
++.+.||+|++|.||+|++..++..||+|.+..... +......+.+|+.+++.++|||++++++.+.. +..++++|
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 3 TKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE--EEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred eEeeEecccCceEEEEEEECCCCcEEEEEEeccccc--cCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 677899999999999999999999999999875432 22233667789999999999999999999854 45688999
Q ss_pred ccccCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 108 EVCTSGNLREYRKKH---RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 108 e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
||++ ++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR--VLHRDLKPQNLLIDNK-GVIKLADFGLARAFGIP 154 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCCHHHEEEcCC-CcEEECcccceeecCCC
Confidence 9997 6887776532 45889999999999999999999999 9999999999999865 68999999999765433
Q ss_pred ce------eeeecccCccccCCCccccccceeeecc
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.. .+..+.+|+.......++.++|+||+|+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 190 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGT 190 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHH
Confidence 21 1223344444444555677899999993
No 156
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=9.7e-29 Score=197.91 Aligned_cols=178 Identities=24% Similarity=0.407 Sum_probs=138.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcE--EEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIE--VAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 103 (219)
+.+.+.||+|+||.||+|.+..++.. +++|.++.. ........+.+|++++.++ +|+|++++++++.. .+.+
T Consensus 9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--~~~~ 83 (303)
T cd05088 9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYL 83 (303)
T ss_pred ceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc---CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC--CCCc
Confidence 47889999999999999998777765 466654422 1334457788999999999 89999999999844 4568
Q ss_pred EEEeccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC
Q 027788 104 NFITEVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT 167 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~ 167 (219)
+++|||+++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||||+|++++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dlkp~Nili~~~- 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN- 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchheEEecCC-
Confidence 88999999999999886432 4678899999999999999999999 9999999999999866
Q ss_pred CcEEEeccccceeccccceee-----eecccCccccCCCccccccceeeec
Q 027788 168 GQVKIGDLGVAAIVGRAIRRI-----RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 168 ~~~~l~dfg~a~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.++|+|||++.......... ..+.+| +......++.++|+||+|
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 210 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVWSYG 210 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCH-HHHhccCCcccccchhhh
Confidence 589999999986432211111 112233 333445567789999999
No 157
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=3.7e-29 Score=197.87 Aligned_cols=181 Identities=26% Similarity=0.458 Sum_probs=147.3
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
..+| .+.+.||+|++|.||++....++..+++|.+... .....+.+..|++++++++|+|++++++.+.. ...
T Consensus 4 ~~~~-~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 76 (280)
T cd06611 4 NDIW-EIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENK 76 (280)
T ss_pred hhHH-HHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCe
Confidence 3444 7778999999999999999889999999998754 45556788899999999999999999999854 456
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++++|||+++++|..++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++|+|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~nili~~~-~~~~l~d~g~~~~~ 153 (280)
T cd06611 77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK--VIHRDLKAGNILLTLD-GDVKLADFGVSAKN 153 (280)
T ss_pred EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEECCC-CCEEEccCccchhh
Confidence 88999999999999988653 46899999999999999999999999 9999999999999865 58999999988765
Q ss_pred cccce------eeeecccCcccc----CCCccccccceeeec
Q 027788 182 GRAIR------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
..... ++..+.+|+... ....++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG 195 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG 195 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHH
Confidence 44322 122233333221 233456679999999
No 158
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96 E-value=1.1e-28 Score=194.01 Aligned_cols=179 Identities=23% Similarity=0.364 Sum_probs=143.2
Q ss_pred eeeeeeeeccccceEEEEEEecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEG---IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.+++.+.||+|+||.||+|+...++ ..+|+|.++... .....+.+.+|+.+++.++|||++++++++.. .+.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 79 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY---TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKP 79 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCc
Confidence 3488899999999999999876444 368999876432 34456788999999999999999999998853 456
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++++||++++++|.+++... ..++...+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++++|||++...
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~-~~~~l~dfg~~~~~ 156 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILVNSN-LVCKVSDFGLSRVL 156 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeehhhchhcEEECCC-CeEEeCCCCccccc
Confidence 88899999999999988754 46789999999999999999999999 9999999999999865 58999999999876
Q ss_pred cccceee---------eecccCccccCCCccccccceeeec
Q 027788 182 GRAIRRI---------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... ..+.+ ++......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG 196 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTA-PEAIAYRKFTSASDVWSYG 196 (267)
T ss_pred ccccceeeecCCCccceeecC-HhHhccCccCchhhhHHHH
Confidence 5432211 11222 2334445677789999999
No 159
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=7e-29 Score=197.38 Aligned_cols=180 Identities=24% Similarity=0.376 Sum_probs=139.9
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| ++.+.||+|+||.||+|.+..++..+++|.+..... ......+.+|+.+++.++|+|++++.+++.. ....
T Consensus 5 ~~y-~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~ 78 (291)
T cd07870 5 TSY-LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---EGVPFTAIREASLLKGLKHANIVLLHDIIHT--KETL 78 (291)
T ss_pred cee-EEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---CCCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeE
Confidence 445 788999999999999999999999999999875432 1222356789999999999999999998854 4568
Q ss_pred EEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|+++ +++.+.+.. ...+....+..++.|++.||.|||+.+ ++|+||||+||+++.+ +.++|+|||+++...
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH--ILHRDLKPQNLLISYL-GELKLADFGLARAKS 154 (291)
T ss_pred EEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChHHEEEcCC-CcEEEeccccccccC
Confidence 88999996 566665543 345778888999999999999999999 9999999999999855 689999999987643
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .+..+.+|+.+.....++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 191 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAG 191 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHH
Confidence 3221 122233344333344567779999999
No 160
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.96 E-value=2.3e-28 Score=190.78 Aligned_cols=177 Identities=20% Similarity=0.384 Sum_probs=144.8
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|+||.||++.+..++..+++|.++... .....+.+..|+.+++.++|+|++++.+.+. ..+.+++++
T Consensus 3 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 77 (255)
T cd08219 3 NVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK---SSSAVEDSRKEAVLLAKMKHPNIVAFKESFE--ADGHLYIVM 77 (255)
T ss_pred eEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc---chHHHHHHHHHHHHHHhCCCCCcceEEEEEE--ECCEEEEEE
Confidence 67799999999999999999999999999987543 2344577889999999999999999999884 446789999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++++|.+++... ..++++.+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||.+.......
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR--VLHRDIKSKNIFLTQN-GKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEECCC-CcEEEcccCcceeecccc
Confidence 999999999887542 35789999999999999999999999 9999999999999855 589999999998765432
Q ss_pred e------eeeecccCccccCCCccccccceeeec
Q 027788 186 R------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. +...+.+|+ ......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~aPE-~~~~~~~~~~~Dv~slG 187 (255)
T cd08219 155 AYACTYVGTPYYVPPE-IWENMPYNNKSDIWSLG 187 (255)
T ss_pred cccccccCCccccCHH-HHccCCcCchhhhhhhc
Confidence 2 111233333 33444577789999999
No 161
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=3.8e-29 Score=203.10 Aligned_cols=182 Identities=24% Similarity=0.363 Sum_probs=142.5
Q ss_pred ceeeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDE 98 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 98 (219)
+.|++.+.||+|+||.||+|+.. .+++.||+|.++... .....+.+..|+.+++++ +|+||+++++.+..+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC---CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34589999999999999999743 345789999887432 233446678899999999 799999999988644
Q ss_pred CCceEEEEeccccCCChHHHHHhC--------------------------------------------------------
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH-------------------------------------------------------- 122 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~-------------------------------------------------------- 122 (219)
...+++++||+++++|.+++...
T Consensus 84 -~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 84 -GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred -CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 35677899999999999887532
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---e-----ee
Q 027788 123 -----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---R-----IR 189 (219)
Q Consensus 123 -----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---~-----~~ 189 (219)
..+++..+..++.|++.++.|||+++ ++||||||+||+++.+ +.++|+|||++..+..... . ..
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~--ivHrDikp~Nill~~~-~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEeCC-CcEEEeccccchhcccCcchhhccCCCCCc
Confidence 24688889999999999999999999 9999999999999965 5899999999987643321 1 11
Q ss_pred ecccCccccCCCccccccceeeecc
Q 027788 190 CWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.+.+ +++.....++.++|+||+|+
T Consensus 240 ~y~a-PE~~~~~~~~~~~Di~SlGv 263 (337)
T cd05054 240 KWMA-PESIFDKVYTTQSDVWSFGV 263 (337)
T ss_pred cccC-cHHhcCCCCCccccHHHHHH
Confidence 1223 34455566788899999993
No 162
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=1.6e-28 Score=192.12 Aligned_cols=181 Identities=27% Similarity=0.411 Sum_probs=148.0
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
..+| .+.+.||+|+||.||+|....++..+++|.+.... ....+.+..|+.+++.++|||++++++.+.. .+.
T Consensus 2 ~~~~-~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~ 74 (262)
T cd06613 2 QEDY-ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDK 74 (262)
T ss_pred ccce-EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCE
Confidence 3455 77799999999999999998899999999987543 2355788899999999999999999998844 456
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++++||++++++|..++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++...
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~ 151 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG--KIHRDIKGANILLTED-GDVKLADFGVSAQL 151 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCChhhEEECCC-CCEEECccccchhh
Confidence 88999999999999988765 67999999999999999999999999 9999999999999855 68999999998776
Q ss_pred cccce------eeeecccCccccCC--Cccccccceeeec
Q 027788 182 GRAIR------RIRCWGRRSSWRRS--CTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~------~~~~~~~~~~~~~~--~~~~~~~diws~g 213 (219)
..... ....+.+|+..... ..++.++|+||+|
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG 191 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALG 191 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHH
Confidence 54321 12223444433222 3667789999999
No 163
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=1.6e-28 Score=192.85 Aligned_cols=179 Identities=21% Similarity=0.313 Sum_probs=143.0
Q ss_pred eeeeeeeccccceEEEEEEecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEE---GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
+++.+.||+|+||.||+|....+ ...||+|.++... .......+.+|+.++++++|||++++++.+.. ....
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 80 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS---SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRPV 80 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCce
Confidence 47889999999999999987543 4579999876442 34455778899999999999999999998854 4557
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++||++++++|.+++... +.+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~di~p~nili~~~-~~~~l~dfg~~~~~~ 157 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--YVHRDLAARNILVNSN-LVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCC-CCEEECccchhhccc
Confidence 8899999999999988654 46899999999999999999999999 9999999999999865 589999999998875
Q ss_pred ccceeee-------ecccCccccCCCccccccceeeec
Q 027788 183 RAIRRIR-------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~~~~-------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... ....+++......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG 195 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFG 195 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHH
Confidence 2221111 111223344455677789999999
No 164
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=1.8e-28 Score=191.32 Aligned_cols=178 Identities=22% Similarity=0.376 Sum_probs=145.9
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
++.+.||.|+||.||.+....++..+++|.+..... .....+.+.+|++++++++|+|++++++++.. ...++++|
T Consensus 3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 3 IPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL--SEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred eEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc--chhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 666999999999999999999999999999875543 34555778899999999999999999999954 46788999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++++|.+++... ..++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~ni~~~~~-~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG--ILHRDIKTLNIFLTKA-GLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChHhEEEeCC-CCEEECcCcceEEccccc
Confidence 999999999988654 45889999999999999999999999 9999999999999865 589999999998764433
Q ss_pred e------eeeecccCccccCCCccccccceeeec
Q 027788 186 R------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+| +......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~y~ap-e~~~~~~~~~~~Dv~slG 188 (256)
T cd08221 156 SMAETVVGTPYYMSP-ELCQGVKYNFKSDIWALG 188 (256)
T ss_pred ccccccCCCccccCH-hhcCCCCCCCcchhHHHH
Confidence 1 11222223 333344466779999999
No 165
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=1.5e-29 Score=200.39 Aligned_cols=179 Identities=28% Similarity=0.457 Sum_probs=142.8
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||+|.+..+|+.+++|.++.... .......+.+|++++++++|+|++++++++. +...+++++
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 78 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLYDVLH--SDKKLTLVF 78 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cccCccchhHHHHHHHhcCCCCeeeHHHHhc--cCCceEEEE
Confidence 667899999999999999999999999999875432 2223355778999999999999999999884 445688999
Q ss_pred ccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||++ ++|.+++.. ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||+++.......
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN--VLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVR 154 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEcCC-CcEEECccchhhccCCCCC
Confidence 9997 577776643 456899999999999999999999999 9999999999999866 5899999999986543321
Q ss_pred ------eeeecccCccccCCCccccccceeeecc
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.+..+.+|+.+.....++.++|+||+|+
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 188 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 188 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHH
Confidence 1222334443444455677899999993
No 166
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.96 E-value=1e-28 Score=193.87 Aligned_cols=180 Identities=24% Similarity=0.400 Sum_probs=145.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|+...++..||+|.++.... .+......+.+|+.+++.++|||++++++.+... +..+++
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v 80 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--NELNIV 80 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--CeEEEE
Confidence 3788999999999999999999999999998765332 2345557788999999999999999999988543 567889
Q ss_pred eccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|++++++|.+++.. ...+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~nil~~~~-~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCCHHHEEEcCC-CCEEECccccceecc
Confidence 999999999887742 234788999999999999999999999 9999999999999865 589999999998765
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... +...+.+| +......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~aP-E~~~~~~~~~~~Di~slG 193 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSP-ERIHENGYNFKSDIWSLG 193 (267)
T ss_pred chhHHHhcCCCCccccCh-hhhccCCCCchhhHHHHH
Confidence 4332 11223333 334445567789999999
No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.96 E-value=1.2e-28 Score=195.08 Aligned_cols=174 Identities=26% Similarity=0.421 Sum_probs=141.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+++.+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.++++++|||++++++.+... +..+++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 77 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRISIC 77 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEEEE
Confidence 367789999999999999999999999999886442 334456788999999999999999999998554 557789
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|..+ ..+++..+..++.|++.|+.|||+.+ ++|+||+|+|++++.+ +.++|+|||++........
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nill~~~-~~~~l~dfg~~~~~~~~~~ 150 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK--ILHRDVKPSNMLVNTR-GQVKLCDFGVSTQLVNSIA 150 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCCHHHEEECCC-CCEEEeeCCcceecccccc
Confidence 999999988654 24788889999999999999999999 9999999999999866 6899999999987644322
Q ss_pred ----eeeecccCccccCCCccccccceeeec
Q 027788 187 ----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 151 ~~~~~~~~y~aP-E~~~~~~~~~~~DvwslG 180 (279)
T cd06619 151 KTYVGTNAYMAP-ERISGEQYGIHSDVWSLG 180 (279)
T ss_pred cCCCCChhhcCc-eeecCCCCCCcchHHHHH
Confidence 22223333 344455677889999999
No 168
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=1e-28 Score=195.62 Aligned_cols=178 Identities=25% Similarity=0.363 Sum_probs=142.3
Q ss_pred eeeeeeeccccceEEEEEEecCCC-----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEG-----IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+++.+.||+|+||.||+|.....+ ..+++|.++... .......+.+|+.+++.++|||++++++++.. ..
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~ 81 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA---EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--EQ 81 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC---CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC--CC
Confidence 367789999999999999876554 679999876432 34556778999999999999999999998854 34
Q ss_pred eEEEEeccccCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 102 TLNFITEVCTSGNLREYRKKH----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
..++++||+++++|.+++... ..+++..+..++.|++.|+.|||..+ ++|+||||+||+++.
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nil~~~ 159 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH--FVHRDLAARNCLVGE 159 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccccceEEEcC
Confidence 578899999999999988654 34778889999999999999999999 999999999999986
Q ss_pred CCCcEEEeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 166 NTGQVKIGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+ +.++|+|||++........ .+..+.+| +......++.++|+||+|
T Consensus 160 ~-~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~sDv~slG 213 (283)
T cd05048 160 G-LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP-EAILYGKFTTESDIWSFG 213 (283)
T ss_pred C-CcEEECCCcceeeccccccccccCCCcccccccCH-HHhccCcCchhhhHHHHH
Confidence 5 5899999999986543321 11123333 334445678889999999
No 169
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=7.7e-29 Score=200.49 Aligned_cols=179 Identities=18% Similarity=0.272 Sum_probs=141.6
Q ss_pred eeeeeccc--cceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 29 YNELLGSG--AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 29 ~~~~ig~g--~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.++||+| +|+.||++.+..+++.||+|.++.... .....+.+.+|+.+++.++||||+++++++..+ +..+++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv 77 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC--TNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVV 77 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc--cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEE
Confidence 45789999 789999999999999999999875532 344556778899999999999999999998654 568899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.+ +.+++.||+.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiH~dlkp~Nil~~~~-~~~~l~~~~~~~~~~~~ 154 (327)
T cd08227 78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVD-GKVYLSGLRSNLSMINH 154 (327)
T ss_pred EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCChhhEEEecC-CcEEEcccchhhccccc
Confidence 9999999999988643 45889999999999999999999999 9999999999999865 58999999765443221
Q ss_pred ce-------------eeeecccCccccCC-Cccccccceeeecc
Q 027788 185 IR-------------RIRCWGRRSSWRRS-CTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~-------------~~~~~~~~~~~~~~-~~~~~~~diws~gi 214 (219)
.. ....+.+|+..... ..++.++|+||+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~ 198 (327)
T cd08227 155 GQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 198 (327)
T ss_pred cccccccccccccccceecccChHHhhcccCCCCchhhHHHHHH
Confidence 11 11223344433322 45778899999993
No 170
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=1.7e-28 Score=194.12 Aligned_cols=180 Identities=24% Similarity=0.401 Sum_probs=143.0
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGI----EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
.+.+++.+.||+|+||.||+|....++. .||+|.++... .......+.+|+.+++.++|+|++++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC---CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-
Confidence 3445778999999999999998776665 47889876432 344557788999999999999999999988543
Q ss_pred CceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 RNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
..+++++++++|+|.+++... ..+++..+..++.|++.|+.|||+++ ++|+||||+||+++.+ +.++|+|||++
T Consensus 82 --~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--iiH~dlkp~Nil~~~~-~~~kL~dfG~~ 156 (279)
T cd05109 82 --TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR--LVHRDLAARNVLVKSP-NHVKITDFGLA 156 (279)
T ss_pred --CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccccceEEEcCC-CcEEECCCCce
Confidence 356799999999999988653 46899999999999999999999999 9999999999999755 58999999999
Q ss_pred eeccccceee--------eecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+......... ..+.+ ++......++.++|+||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG 198 (279)
T cd05109 157 RLLDIDETEYHADGGKVPIKWMA-LESILHRRFTHQSDVWSYG 198 (279)
T ss_pred eecccccceeecCCCccchhhCC-HHHhccCCCCchhHHHHHH
Confidence 8775433211 11222 3334455577789999999
No 171
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=1.2e-28 Score=192.78 Aligned_cols=173 Identities=23% Similarity=0.416 Sum_probs=140.1
Q ss_pred eeccccceEEEEEEe--cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 32 LLGSGAVKKVYRAFD--QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
.||+|+||.||+|.. ..++..+|+|+++... ......+.+.+|+.+++.++|+|++++++.+.. ...+++||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~ 76 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN--NDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMEL 76 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC--CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEec
Confidence 689999999999964 4667899999987543 245566889999999999999999999988742 346789999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee--
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR-- 187 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~-- 187 (219)
+++++|.+++.....+++..+..++.|++.++.++|.++ ++|+||||.|++++.+ +.++|+|||++.........
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~nill~~~-~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 77 AELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN--FVHRDLAARNVLLVTQ-HYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchhhEEEcCC-CeEEECCCccccccCCCCCeee
Confidence 999999999887778999999999999999999999999 9999999999999865 58999999999876544321
Q ss_pred --e-----eecccCccccCCCccccccceeeec
Q 027788 188 --I-----RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 --~-----~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ..+.+| +......++.++|+||||
T Consensus 154 ~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 185 (257)
T cd05116 154 AKTHGKWPVKWYAP-ECMNYYKFSSKSDVWSFG 185 (257)
T ss_pred ecCCCCCCccccCH-hHhccCCcCchhHHHHHH
Confidence 0 112222 233445567789999999
No 172
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=5.3e-29 Score=194.69 Aligned_cols=181 Identities=20% Similarity=0.349 Sum_probs=149.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||.|+||.||+|.+..++..+++|.+...... .....+.+.+|++++++++|||++++++.+ ++...++++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~lv 78 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV-EKGSVRNVLNERRILQELNHPFLVNLWYSF--QDEENMYLV 78 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc-chhHHHHHHHHHHHHHhCCCCChHHHHHhh--cCCCeEEEE
Confidence 47789999999999999999999999999998854332 334567899999999999999999998888 455678999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+|++++++|..++.....+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~-~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG--IIHRDIKPDNILLDEQ-GHVHITDFNIATKVTPDTL 155 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEEcCC-CCEEEeecccccccCCCcc
Confidence 999999999999877778999999999999999999999999 9999999999999865 6899999999987655422
Q ss_pred -----eeeecccCccccCCCccccccceeeecc
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+...+.+| +......++.++|+||+|+
T Consensus 156 ~~~~~~~~~y~~P-E~~~~~~~~~~~Di~slG~ 187 (258)
T cd05578 156 TTSTSGTPGYMAP-EVLCRQGYSVAVDWWSLGV 187 (258)
T ss_pred ccccCCChhhcCH-HHHcccCCCCcccchhhHH
Confidence 11222233 3334444677899999993
No 173
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=5.6e-29 Score=202.60 Aligned_cols=180 Identities=25% Similarity=0.365 Sum_probs=140.4
Q ss_pred eeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDED 99 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 99 (219)
.|++.+.||+|+||.||+|.+ ..+++.||+|.++... .......+.+|+.+++++ +|+|++++++++..++
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 348999999999999999974 3567889999987543 233456788999999999 6899999998875443
Q ss_pred CceEEEEeccccCCChHHHHHhC---------------------------------------------------------
Q 027788 100 RNTLNFITEVCTSGNLREYRKKH--------------------------------------------------------- 122 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~--------------------------------------------------------- 122 (219)
..++++|||+++|+|.+++...
T Consensus 85 -~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 85 -GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred -CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 4678899999999999887542
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee-----
Q 027788 123 ----------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR----- 187 (219)
Q Consensus 123 ----------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~----- 187 (219)
..++......++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++++|||++.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~~-~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEN-NVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCccCeEEEcCC-CcEEEEecccccccccCcchhhcCC
Confidence 12566778889999999999999999 9999999999999865 58999999999875432210
Q ss_pred ---eeecccCccccCCCccccccceeeec
Q 027788 188 ---IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 ---~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+..+.+ ++......++.++|+||+|
T Consensus 241 ~~~~~~y~a-PE~~~~~~~~~~~Di~slG 268 (343)
T cd05103 241 ARLPLKWMA-PETIFDRVYTIQSDVWSFG 268 (343)
T ss_pred CCCCcceEC-cHHhcCCCCCchhhHHHHH
Confidence 011222 3344455677889999999
No 174
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=2.1e-28 Score=193.59 Aligned_cols=183 Identities=28% Similarity=0.443 Sum_probs=147.7
Q ss_pred CceeeeeeeeccccceEEEEEEec----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQ----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
.+++++.+.||+|+||.||+|... .++..+|+|.++.... ....+.+.+|+++++.++|+|++++++++....
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~ 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE---EQHRSDFEREIEILRTLDHENIVKYKGVCEKPG 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc---hHHHHHHHHHHHHHHhCCCCChheEEeeeecCC
Confidence 455677799999999999999854 4578999999875432 235678999999999999999999999887656
Q ss_pred CceEEEEeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
....+++||++++++|.+++.... .+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~ 156 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR--YIHRDLAARNILVESE-DLVKISDFGLA 156 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccccc
Confidence 677899999999999999887653 5899999999999999999999999 9999999999999866 68999999999
Q ss_pred eecccccee---------eeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIRR---------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
......... ...+.+|+ ......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe-~~~~~~~~~~~Di~slG 199 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPE-CLRTSKFSSASDVWSFG 199 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcH-HHccCCCCcccchHHHh
Confidence 887633211 11123333 23344567789999999
No 175
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=3.6e-28 Score=189.69 Aligned_cols=180 Identities=22% Similarity=0.412 Sum_probs=145.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|++|.||.+.+..+++.+++|.+..... .....+.+.+|++++++++|+|++++.+.+.. ....++++
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~lv 78 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA--SRRERKAAEQEAQLLSQLKHPNIVAYRESWEG-EDGLLYIV 78 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC-CCCEEEEE
Confidence 3788999999999999999999999999999875432 23445678899999999999999999887743 33567899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
||++++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--i~H~di~p~nil~~~~-~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH--ILHRDLKTQNVFLTRT-NIIKVGDLGIARVLENQ 155 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCchhEEEecC-CcEEEecccceEEeccc
Confidence 9999999999887653 45899999999999999999999999 9999999999999855 58999999999876433
Q ss_pred ce------eeeecccCccccCCCccccccceeeec
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. +...+ .+++......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~y-~aPE~~~~~~~~~~~Dv~slG 189 (257)
T cd08223 156 CDMASTLIGTPYY-MSPELFSNKPYNYKSDVWALG 189 (257)
T ss_pred CCccccccCCcCc-cChhHhcCCCCCchhhhHHHH
Confidence 21 11122 233455556677789999999
No 176
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=9.7e-29 Score=197.14 Aligned_cols=182 Identities=26% Similarity=0.416 Sum_probs=147.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC-CHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD-DPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|++|.||+|.+..+++.|++|.+....... .......+..|++++++++|+|++++++++.. .+.+++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l 79 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNINL 79 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEEE
Confidence 366789999999999999999899999999987654321 12234567789999999999999999999855 567889
Q ss_pred EeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||++ +++|.+++.... .+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nill~~~-~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW--ILHRDLKPNNLLIASD-GVLKLADFGLARSFGSP 155 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecCCChhhEEEcCC-CCEEEccceeeeeccCC
Confidence 99999 889999887665 7899999999999999999999999 9999999999999865 68999999999877554
Q ss_pred ce------eeeecccCccccCCCccccccceeeecc
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.. ....+.+|+.......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 191 (298)
T cd07841 156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGC 191 (298)
T ss_pred CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHH
Confidence 32 1122344443434455677899999993
No 177
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96 E-value=1.3e-28 Score=193.35 Aligned_cols=181 Identities=27% Similarity=0.442 Sum_probs=145.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCC-----HHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDD-----PAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
|.+.+.||+|++|.||+|.+..++..+|+|.+........ ....+.+.+|+.++++++|||++++++.+.. ..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--AD 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CC
Confidence 3577899999999999999988999999998875433211 1234678899999999999999999998854 45
Q ss_pred eEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 102 TLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
..++++||+++++|.+++.....++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~--ivH~di~p~nil~~~~-~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG--IIHRDIKGANILVDNK-GGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC--cccccCCHHHEEEcCC-CCEEecccCCCccc
Confidence 67889999999999999987778899999999999999999999999 9999999999999865 58999999999877
Q ss_pred cccce------------eeeecccCccccCCCccccccceeeec
Q 027788 182 GRAIR------------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..... +...+.+ ++......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Dv~slG 199 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMA-PEVVKQTSYTRKADIWSLG 199 (267)
T ss_pred ccccccCCccccccccCCCcCccC-hhHhccCCCCchhhhHHHH
Confidence 53221 0111222 2333445567789999999
No 178
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=1.5e-28 Score=195.75 Aligned_cols=180 Identities=24% Similarity=0.326 Sum_probs=143.6
Q ss_pred CceeeeeeeeccccceEEEEEEecCCC----------------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEG----------------IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN 87 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 87 (219)
++| ++.+.||+|+||.||+|.+...+ ..+|+|.+.... .....+.+.+|+.++++++|||
T Consensus 5 ~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 5 QPL-NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred hhC-cccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhcCCCC
Confidence 344 78899999999999999876543 457999877443 3455678899999999999999
Q ss_pred ceEEEEEEecCCCceEEEEeccccCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCC
Q 027788 88 IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHR-----------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDL 156 (219)
Q Consensus 88 i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-----------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl 156 (219)
++++++++... ..+++++|++++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||
T Consensus 81 i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~--i~H~dl 156 (296)
T cd05051 81 IARLLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDL 156 (296)
T ss_pred EeEEEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC--cccccc
Confidence 99999988544 56788999999999999887654 6889999999999999999999999 999999
Q ss_pred CCCceEEeCCCCcEEEeccccceeccccceee--------eecccCccccCCCccccccceeeec
Q 027788 157 NCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 157 ~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
||+||+++.+ +.++++|||++.......... ..+.+| +......++.++|+||+|
T Consensus 157 kp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 219 (296)
T cd05051 157 ATRNCLVGKN-YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAW-ESVLLGKFTTKSDVWAFG 219 (296)
T ss_pred chhceeecCC-CceEEccccceeecccCcceeecCcCCCCceecCH-HHhhcCCCCccchhhhhH
Confidence 9999999866 689999999998654432111 112222 333344577889999999
No 179
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=2.2e-28 Score=191.89 Aligned_cols=176 Identities=25% Similarity=0.389 Sum_probs=143.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|++|.||+|...+++..+++|.+... ......+.+|+.+++.++|+|++++++.+..+ ..++++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 80 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYII 80 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCC-----chHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcEEE
Confidence 47788999999999999999999999999987632 23346788999999999999999999988544 457889
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGEN-HLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CcEEeCCCccccccccc
Confidence 9999999999988653 35788999999999999999999999 9999999999999855 58999999999876543
Q ss_pred ceee-------eecccCccccCCCccccccceeeec
Q 027788 185 IRRI-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ..+.+| +......++.++|+||||
T Consensus 158 ~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 192 (263)
T cd05052 158 TYTAHAGAKFPIKWTAP-ESLAYNKFSIKSDVWAFG 192 (263)
T ss_pred eeeccCCCCCccccCCH-HHhccCCCCchhHHHHHH
Confidence 3211 112233 344455677789999999
No 180
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=1e-28 Score=194.37 Aligned_cols=181 Identities=19% Similarity=0.256 Sum_probs=139.9
Q ss_pred eeeeeeccccceEEEEEEecCCCc--EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC----Cc
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGI--EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED----RN 101 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~----~~ 101 (219)
.+++.||+|+||.||+|....++. .+|+|.++.... .....+.+..|+.+++.++|+|++++++.+.... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC--TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 467899999999999999876665 689998775432 3455678889999999999999999998764321 23
Q ss_pred eEEEEeccccCCChHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 102 TLNFITEVCTSGNLREYRKK------HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~------~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
..++++||+++++|.+++.. ...+++.....++.|++.|+.|||+++ ++|+||||+||+++.+ +.++|+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS--FIHRDLAARNCMLNEN-MNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhheEEcCC-CCEEECCC
Confidence 46789999999999887632 124789999999999999999999999 9999999999999865 58999999
Q ss_pred ccceecccccee---ee----ecccCccccCCCccccccceeeec
Q 027788 176 GVAAIVGRAIRR---IR----CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|++......... .. ....+++......++.++|+||+|
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG 201 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFG 201 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHH
Confidence 999876443211 01 011112334455677889999999
No 181
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96 E-value=2e-28 Score=192.60 Aligned_cols=181 Identities=20% Similarity=0.294 Sum_probs=142.0
Q ss_pred eeeeeeeccccceEEEEEEecC---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC---
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE---EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR--- 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~--- 100 (219)
+++.+.||+|+||.||.|.... ++..+|+|.++.... .......+.+|++.++.++|||++++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH--TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 3678899999999999998654 347899999875432 34455778999999999999999999988754332
Q ss_pred -ceEEEEeccccCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 101 -NTLNFITEVCTSGNLREYRKKH------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 101 -~~~~lv~e~~~~g~L~~~~~~~------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
...++++||+++++|..++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~--i~H~dlkp~Nil~~~~-~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN--FIHRDLAARNCMLRED-MTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchheEEECCC-CeEEEC
Confidence 3478899999999999877432 25788999999999999999999999 9999999999999865 589999
Q ss_pred ccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|||+++........ ...+.+| +......++.++|+||+|
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~p-e~~~~~~~~~~~Dv~SlG 202 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAI-ESLADRVYTSKSDVWAFG 202 (273)
T ss_pred CccceeeccccccccccccccCCccccCH-hhcccCCCCcccchHHHH
Confidence 99999876543311 0112222 334455677789999999
No 182
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.96 E-value=2.9e-28 Score=191.16 Aligned_cols=180 Identities=24% Similarity=0.421 Sum_probs=146.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|....++..+++|.++.... .+....+.+.+|++++++++|+|++++++.+.. .+..+++
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~~~~~lv 80 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM-MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE--NNELNIV 80 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc-cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEEEE
Confidence 3788999999999999999998999999999875332 234446788999999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+++++|..++.. ...++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~nil~~~~-~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR--IMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecCCcChhhEEECCC-CcEEEeccceeeecc
Confidence 999999999988753 235789999999999999999999999 9999999999999865 589999999987654
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ....+.+ ++......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~y~a-pE~~~~~~~~~~~Di~slG 193 (267)
T cd08224 158 SKTTAAHSLVGTPYYMS-PERIHENGYNFKSDIWSLG 193 (267)
T ss_pred CCCcccceecCCccccC-HHHhccCCCCchhcHHHHH
Confidence 3321 1112223 3344556677789999999
No 183
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=2e-28 Score=193.50 Aligned_cols=181 Identities=22% Similarity=0.332 Sum_probs=140.3
Q ss_pred CceeeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
.+.+++.+.||+|+||.||.|.+. .++..+|+|.++... .......+.+|+.+++.++|||++++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-- 79 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVS-- 79 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--
Confidence 344588899999999999999754 345679999875322 2334567889999999999999999999884
Q ss_pred CCceEEEEeccccCCChHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHR----------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG 168 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~----------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~ 168 (219)
.....+++|||+++++|.+++.... .++...+..++.|++.++.|||+.+ ++|+||||+||+++.+ +
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~vH~dlkp~Nil~~~~-~ 156 (277)
T cd05062 80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAED-F 156 (277)
T ss_pred CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCcchheEEEcCC-C
Confidence 3455788999999999999876422 2467788899999999999999999 9999999999999865 5
Q ss_pred cEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 169 QVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.++++|||++......... +..+.+| +......++.++|+||||
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 208 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP-ESLKDGVFTTYSDVWSFG 208 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcCh-hHhhcCCcCchhHHHHHH
Confidence 8999999998765433221 1113333 333445577789999999
No 184
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=2.4e-28 Score=206.46 Aligned_cols=179 Identities=19% Similarity=0.270 Sum_probs=137.8
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC------CceEEEEEEecC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK------NIISLHYVWRDE 98 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~~~~~~~~~ 98 (219)
+.|++.++||+|+||.||+|.+..+++.||+|+++.. .........|+.+++.++|. +++++.+++..+
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 3458889999999999999999999999999998632 22234456788888777654 477888877643
Q ss_pred CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCC---------
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTG--------- 168 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~--------- 168 (219)
...++++|+++ +++|.+++.....+++..+..++.|++.||.|||. .+ |+||||||+||+++.+..
T Consensus 204 -~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g--IiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 -TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH--LMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred -CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEEEecCCcccccccccc
Confidence 35678899988 57888888777789999999999999999999997 58 999999999999975421
Q ss_pred ------cEEEeccccceeccccce---eeeecccCccccCCCccccccceeeec
Q 027788 169 ------QVKIGDLGVAAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 169 ------~~~l~dfg~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+||+|||.+........ ++..+.+|+ ......++.++||||||
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE-~~~~~~~~~~~DiwSlG 332 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPE-VVLGLGWMYSTDMWSMG 332 (467)
T ss_pred cCCCCceEEECCCCccccCccccccccCCccccCcH-HhhcCCCCcHHHHHHHH
Confidence 489999998865432221 222334443 33455688889999999
No 185
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=2.2e-28 Score=194.38 Aligned_cols=179 Identities=24% Similarity=0.317 Sum_probs=142.9
Q ss_pred ceeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
+-+.+.+.||+|+||.||++.. ..++..+|+|.+... .....+.+.+|++++++++|||++++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVE-- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--
Confidence 4458889999999999999974 335567899987643 34455778999999999999999999999854
Q ss_pred CceEEEEeccccCCChHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHR-------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~-------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
...+++++||+++++|.+++...+ .+++..+..++.|++.++.|||+++ ++||||||+||+++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~--i~H~dlkp~Nili~~~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGEN 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEccC
Confidence 456788999999999999886443 3789999999999999999999999 9999999999999865
Q ss_pred CCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 167 TGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.++++|||++......... ...+.+| +......++.++|+||||
T Consensus 157 -~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~sDiwslG 209 (288)
T cd05093 157 -LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSLG 209 (288)
T ss_pred -CcEEeccCCccccccCCceeecCCCCCccccccCH-HHhccCCCCchhhHHHHH
Confidence 58999999999866433211 1123333 334445677789999999
No 186
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=1.3e-28 Score=196.29 Aligned_cols=179 Identities=23% Similarity=0.324 Sum_probs=140.2
Q ss_pred eeeeeeeeccccceEEEEEEecCC--------------CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEE--------------GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISL 91 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 91 (219)
.|++.+.||+|+||.||+|+...+ ...||+|.++... .......+.+|++++++++|+|++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV---TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 348889999999999999986543 2358999877432 34455678899999999999999999
Q ss_pred EEEEecCCCceEEEEeccccCCChHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 027788 92 HYVWRDEDRNTLNFITEVCTSGNLREYRKKHR------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCS 159 (219)
Q Consensus 92 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ 159 (219)
++.+.. ...++++|||+++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||+|+
T Consensus 83 ~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~ 158 (295)
T cd05097 83 LGVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN--FVHRDLATR 158 (295)
T ss_pred EEEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC--eeccccChh
Confidence 999854 456788999999999999875431 3678889999999999999999999 999999999
Q ss_pred ceEEeCCCCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 160 NVFVNGNTGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 160 nili~~~~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|++++.+ +.++++|||++......... ...+.+| +......++.++|+||||
T Consensus 159 Nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~DvwSlG 218 (295)
T cd05097 159 NCLVGNH-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAW-ESILLGKFTTASDVWAFG 218 (295)
T ss_pred hEEEcCC-CcEEecccccccccccCcceeccCcCcCceeecCh-hhhccCCcCchhhHHHHH
Confidence 9999855 58999999999765433211 1112233 333445577889999999
No 187
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=1.9e-28 Score=195.74 Aligned_cols=184 Identities=24% Similarity=0.401 Sum_probs=148.9
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
..+++..+| .+.+.||+|++|.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++|+|++++++.+.
T Consensus 13 ~~~~~~~~y-~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~- 86 (297)
T cd06656 13 SVGDPKKKY-TRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYL- 86 (297)
T ss_pred ccCChhhhc-eeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 456677777 67799999999999999999999999999987543 223466888999999999999999999884
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.....+++|||+++++|.+++.. ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||+
T Consensus 87 -~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~--i~H~dL~p~Nili~~~-~~~~l~Dfg~ 161 (297)
T cd06656 87 -VGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGF 161 (297)
T ss_pred -cCCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEECcCcc
Confidence 44568899999999999998764 45788999999999999999999999 9999999999999855 6899999999
Q ss_pred ceecccccee------eeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIRR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+......... +..+.+| +......++.++|+||+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 202 (297)
T cd06656 162 CAQITPEQSKRSTMVGTPYWMAP-EVVTRKAYGPKVDIWSLG 202 (297)
T ss_pred ceEccCCccCcCcccCCccccCH-HHHcCCCCCcHHHHHHHH
Confidence 9876443221 1122222 334445567789999999
No 188
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=1.8e-28 Score=194.31 Aligned_cols=178 Identities=24% Similarity=0.328 Sum_probs=140.9
Q ss_pred eeeeeeeccccceEEEEEEe----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFD----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
+++.+.||+|+||.||+|.. ..++..+++|.+.... .......+.+|+.+++.++|||++++++++... ..
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 81 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN---NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QP 81 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cc
Confidence 47889999999999999984 3456789999887432 344557788999999999999999999988544 45
Q ss_pred EEEEeccccCCChHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 103 LNFITEVCTSGNLREYRKKH-----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
.+++|||+++++|.+++... ..+++..+..++.|++.++.|||+++ ++|+||||+|++++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~nili~~ 159 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF--FVHKDLAARNILIGE 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC--eehhccccceEEEcC
Confidence 78899999999999987532 23678888999999999999999999 999999999999986
Q ss_pred CCCcEEEeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 166 NTGQVKIGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+ +.++++|||++........ .+..+.+| ++.....++.++|+||+|
T Consensus 160 ~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 213 (283)
T cd05090 160 Q-LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPP-EAIMYGKFSSDSDIWSFG 213 (283)
T ss_pred C-CcEEeccccccccccCCcceecccCCCccceecCh-HHhccCCCCchhhhHHHH
Confidence 5 5899999999987643321 11112333 344445577889999999
No 189
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=2.2e-28 Score=193.69 Aligned_cols=179 Identities=26% Similarity=0.455 Sum_probs=144.6
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
+|++.+.||+|+||.||+|.+..++..+++|.+... .....+.+.+|+++++.++|+|++++++.+.. .+..++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~~ 79 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWI 79 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCEEEE
Confidence 356778999999999999999999999999987643 34556788899999999999999999998854 456888
Q ss_pred EeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
++||+++++|..++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++......
T Consensus 80 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~--i~H~dlkp~nili~~~-~~~kl~dfg~~~~~~~~ 156 (282)
T cd06643 80 LIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK--IIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRT 156 (282)
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEccC-CCEEEcccccccccccc
Confidence 9999999999887654 457899999999999999999999999 9999999999999865 58999999998765432
Q ss_pred ce------eeeecccCcccc----CCCccccccceeeec
Q 027788 185 IR------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
.. ++..+.+|+... ....++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 195 (282)
T cd06643 157 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 195 (282)
T ss_pred ccccccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence 21 222233343321 234456689999999
No 190
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=186.77 Aligned_cols=188 Identities=20% Similarity=0.255 Sum_probs=151.4
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec---C
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD---E 98 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~ 98 (219)
+.++.|++.+++|+|+|+-||.+....+++.+|+|.+.... ....+..++|++..++++|||++++++.... .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 34566699999999999999999999999999999988663 4556888999999999999999998765532 2
Q ss_pred CCceEEEEeccccCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEec
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGD 174 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~d 174 (219)
.+...|++.+|+..|+|.+.++.. ..+++.+++.++.+++.|+.+||...+++.||||||.||++..+ +.+++.|
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~-~~~vl~D 172 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS-GLPVLMD 172 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC-CceEEEe
Confidence 346789999999999999877532 35899999999999999999999999899999999999999854 5899999
Q ss_pred cccceeccccce---------------eeeecccCccc--cCCCccccccceeeecc
Q 027788 175 LGVAAIVGRAIR---------------RIRCWGRRSSW--RRSCTMRITRSLWTYTR 214 (219)
Q Consensus 175 fg~a~~~~~~~~---------------~~~~~~~~~~~--~~~~~~~~~~diws~gi 214 (219)
||.+...+-... .+..+++|+-| .....++.+.||||||+
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGC 229 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGC 229 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhH
Confidence 999877654432 22223334322 23444677899999993
No 191
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=2.3e-28 Score=191.05 Aligned_cols=173 Identities=25% Similarity=0.416 Sum_probs=140.5
Q ss_pred eeeccccceEEEEEEecCCC---cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEG---IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
++||+|+||.||+|...... ..+|+|.+..... ....+.+.+|+.+++.+.|+|++++++++.. +..+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI---AAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEE
Confidence 47999999999999765544 7899999875542 2345678899999999999999999998743 3468899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
|++++++|.+++.....+++..+..++.|++.++.+||..+ ++|+||+|+|++++.+ +.++|+|||+++........
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~nili~~~-~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 75 ELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH--FVHRDLAARNVLLVNR-HQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred EeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC--eeccCcccceEEEcCC-CcEEeccccccceeecCCcc
Confidence 99999999999987778999999999999999999999999 9999999999999865 58999999999876443321
Q ss_pred e---------eecccCccccCCCccccccceeeec
Q 027788 188 I---------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 ~---------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ..+.+ ++......++.++|+||||
T Consensus 152 ~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG 185 (257)
T cd05060 152 YRATTAGRWPLKWYA-PECINYGKFSSKSDVWSYG 185 (257)
T ss_pred cccccCccccccccC-HHHhcCCCCCccchHHHHH
Confidence 0 11222 3344555677889999999
No 192
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=2e-28 Score=193.84 Aligned_cols=177 Identities=23% Similarity=0.370 Sum_probs=138.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcE----EEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIE----VAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~----vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
++.+.||+|+||.||+|....++.. +++|.+.... ......++..|+..++.++||||+++++++.. ...
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~ 83 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS---GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASL 83 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc---chHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Ccc
Confidence 6778999999999999998777764 6666654221 23344667788889999999999999998743 336
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|++++|+|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||+++...
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~-~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR--MVHRNLAARNILLKSD-SIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEEcCCccceecc
Confidence 6799999999999998654 56899999999999999999999999 9999999999999865 589999999998764
Q ss_pred cccee-------eeecccCccccCCCccccccceeeec
Q 027788 183 RAIRR-------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~~-------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..... ......++++.....++.++|+||||
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG 198 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYG 198 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHH
Confidence 43221 01111223444556678889999999
No 193
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.96 E-value=3.2e-28 Score=190.55 Aligned_cols=179 Identities=25% Similarity=0.400 Sum_probs=142.4
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
..+.+++.++||+|++|.||+|... ++..+|+|.+.... ...+.+..|+.+++.++|+|++++++.+.. .+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 75 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYAVVTK--EEP 75 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCC
Confidence 3445688899999999999999854 56779999876432 234678899999999999999999988844 455
Q ss_pred EEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 103 LNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++++|++++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++..
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~ 152 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN--YIHRDLRAANVLVSES-LMCKIADFGLARV 152 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEecCC-CcEEECCCcccee
Confidence 78899999999999988643 45788899999999999999999999 9999999999999865 5899999999987
Q ss_pred cccccee-------eeecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRR-------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... ...+.+| +......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 191 (261)
T cd05072 153 IEDNEYTAREGAKFPIKWTAP-EAINFGSFTIKSDVWSFG 191 (261)
T ss_pred cCCCceeccCCCccceecCCH-HHhccCCCChhhhhhhhH
Confidence 6543211 0112223 334445577789999999
No 194
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=5.7e-29 Score=197.19 Aligned_cols=180 Identities=24% Similarity=0.369 Sum_probs=145.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.+|+|.+..... .....+.+.+|+++++.++|||++++++++. .....+++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 78 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED--DKMVKKIAMREIRMLKQLRHENLVNLIEVFR--RKKRLYLV 78 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC--cchhhHHHHHHHHHHHhcCCcchhhHHHhcc--cCCeEEEE
Confidence 3677999999999999999988999999998764432 2234467888999999999999999999884 45678899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+||+++++|..+......+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++++|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~h~~l~p~ni~~~~~-~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN--IIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEECCC-CcEEEEeeeeeeeccCCcc
Confidence 999998888887665556899999999999999999999999 9999999999999865 5899999999887644321
Q ss_pred ------eeeecccCccccCCCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+...+.+|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 188 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVG 188 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHH
Confidence 222334444444344466779999999
No 195
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=1.4e-28 Score=195.88 Aligned_cols=180 Identities=22% Similarity=0.316 Sum_probs=146.3
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||+|.+..+++.+++|.++..... ......+.+|+.++++++|||++++.+++...+...+++++
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~ 85 (293)
T cd07843 8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK--EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM 85 (293)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc--ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence 6678999999999999999999999999998765432 23334567899999999999999999988766557899999
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|+++ ++|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 86 e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 86 EYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW--ILHRDLKTSNLLLNNR-GILKICDFGLAREYGSPLK 161 (293)
T ss_pred hhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCC-CcEEEeecCceeeccCCcc
Confidence 9997 5888877654 35899999999999999999999999 9999999999999865 6899999999987765421
Q ss_pred ------eeeecccCccccCCCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+.+|+.......++.++|+||+|
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 194 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVG 194 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHH
Confidence 122233444344444567789999999
No 196
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=3.6e-28 Score=190.07 Aligned_cols=180 Identities=24% Similarity=0.423 Sum_probs=148.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||.|+||.||++.+..++..+++|.++.... .....+.+..|+.+++.++|+|++++++.+..+....++++|
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 3 EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM--TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred eeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC--CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 677899999999999999999999999999875433 345557788999999999999999999988766667789999
Q ss_pred ccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 108 EVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLH-----THEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 108 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh-----~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
||+++++|.+++.. ...+++..++.++.|++.++.+|| +.+ ++|+||+|+||+++.+ +.++++|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~--i~h~dl~p~nili~~~-~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT--VLHRDLKPANIFLDAN-NNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc--ceecCCCHHHEEEecC-CCEEEeccccc
Confidence 99999999988764 356889999999999999999999 777 9999999999999865 68999999999
Q ss_pred eeccccce------eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ +...+.. ++......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-pE~~~~~~~~~~~Dv~slG 197 (265)
T cd08217 158 KILGHDSSFAKTYVGTPYYMS-PEQLNHMSYDEKSDIWSLG 197 (265)
T ss_pred ccccCCcccccccccCCCccC-hhhhcCCCCCchhHHHHHH
Confidence 87755432 1111222 3334445567779999999
No 197
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=2.8e-28 Score=190.84 Aligned_cols=172 Identities=22% Similarity=0.382 Sum_probs=136.4
Q ss_pred eeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 32 LLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
.||+|+||.||+|... ..+..||+|.++... .....+.+.+|+.++++++|+|++++++++.. ...+++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN---EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc---ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEe
Confidence 4899999999999764 445679999887542 34445778999999999999999999998742 357889999
Q ss_pred ccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee-
Q 027788 110 CTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR- 187 (219)
Q Consensus 110 ~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~- 187 (219)
+++++|.+++.. ...+++..+..++.|++.++.+||.++ ++|+||||+||+++.+ +.++++|||++.........
T Consensus 76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN--FVHRDLAARNVLLVNQ-HYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC--eeecccchheEEEcCC-CcEEeccCCccccccCCccce
Confidence 999999998864 456899999999999999999999999 9999999999999865 58999999999865443211
Q ss_pred -e-------eecccCccccCCCccccccceeeec
Q 027788 188 -I-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 -~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ..+.+| +......++.++|+||||
T Consensus 153 ~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 185 (257)
T cd05115 153 KARSAGKWPLKWYAP-ECINFRKFSSRSDVWSYG 185 (257)
T ss_pred eccCCCCCCcccCCH-HHHccCCCCchhhHHHHH
Confidence 0 112222 333344567789999999
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=2.9e-28 Score=194.53 Aligned_cols=181 Identities=25% Similarity=0.436 Sum_probs=147.0
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
++..+| .+.+.||.|++|.||+|.+..+++.|++|.+.... ....+.+.+|+.+++.++|+|++++++.+.. .
T Consensus 16 ~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~ 88 (296)
T cd06655 16 DPKKKY-TRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKELIINEILVMKELKNPNIVNFLDSFLV--G 88 (296)
T ss_pred CCcceE-EEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc----CchHHHHHHHHHHHHhcCCCceeeeeeeEec--C
Confidence 344455 77799999999999999999999999999887542 2334678899999999999999999998854 4
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
+.+++++||+++++|..++... .+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~--i~H~dL~p~Nili~~~-~~~kl~dfg~~~~ 164 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLLGMD-GSVKLTDFGFCAQ 164 (296)
T ss_pred ceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccchh
Confidence 5688999999999999987643 6899999999999999999999999 9999999999999855 6899999999886
Q ss_pred cccccee------eeecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... +..+. +++......++.++|+||+|
T Consensus 165 ~~~~~~~~~~~~~~~~y~-aPE~~~~~~~~~~~Dv~slG 202 (296)
T cd06655 165 ITPEQSKRSTMVGTPYWM-APEVVTRKAYGPKVDIWSLG 202 (296)
T ss_pred cccccccCCCcCCCcccc-CcchhcCCCCCchhhHHHHH
Confidence 6443221 11122 23444455567789999999
No 199
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=2.8e-28 Score=190.99 Aligned_cols=178 Identities=24% Similarity=0.352 Sum_probs=142.4
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
+.+++.+.||+|++|.||+|.+. ++..||+|.++... ...+.+.+|+.++++++|+|++++++++.. .+.++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 77 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL--EEPIY 77 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-----ccHHHHHHHHHHHHHCCCCCccceeEEEec--CCCee
Confidence 34588899999999999999864 45789999887432 123568889999999999999999998854 45578
Q ss_pred EEeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 105 FITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++||++++++|.+++.... .+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~dfg~~~~~~ 154 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN--YIHRDLAARNVLVGEN-NICKVADFGLARVIK 154 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCcceEEEcCC-CCEEECCcceEEEcc
Confidence 8999999999999886543 6889999999999999999999999 9999999999999865 589999999998775
Q ss_pred ccceeee------ecccCccccCCCccccccceeeec
Q 027788 183 RAIRRIR------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~~~~------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... ....+++......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 191 (261)
T cd05068 155 EDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFG 191 (261)
T ss_pred CCcccccCCCcCceeccCccccccCCCCchhhHHHHH
Confidence 4321111 112223444455667789999999
No 200
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=4.6e-28 Score=192.79 Aligned_cols=180 Identities=25% Similarity=0.357 Sum_probs=141.8
Q ss_pred ceeeeeeeeccccceEEEEEEecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEE-----GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDE 98 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 98 (219)
..+++.+.||+|+||.||++..... ...+|+|.+.... .......+.+|+++++++ +|+|++++++++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 87 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ- 87 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-
Confidence 3447889999999999999987543 3789999877432 334456788999999999 79999999998854
Q ss_pred CCceEEEEeccccCCChHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceE
Q 027788 99 DRNTLNFITEVCTSGNLREYRKK----------------HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVF 162 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~----------------~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nil 162 (219)
...++++|||+++++|..++.. ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+
T Consensus 88 -~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~Nil 164 (293)
T cd05053 88 -EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK--CIHRDLAARNVL 164 (293)
T ss_pred -CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--ccccccceeeEE
Confidence 3458889999999999998853 235788899999999999999999999 999999999999
Q ss_pred EeCCCCcEEEeccccceeccccceee--------eecccCccccCCCccccccceeeec
Q 027788 163 VNGNTGQVKIGDLGVAAIVGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 163 i~~~~~~~~l~dfg~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++.+ +.++++|||+++......... ..+.+ ++......++.++|+||+|
T Consensus 165 ~~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG 221 (293)
T cd05053 165 VTED-HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFG 221 (293)
T ss_pred EcCC-CeEEeCccccccccccccceeccCCCCCCccccC-HHHhccCCcCcccceeehh
Confidence 9865 689999999998765432110 11222 3334455577789999999
No 201
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=3e-28 Score=191.45 Aligned_cols=180 Identities=22% Similarity=0.327 Sum_probs=143.2
Q ss_pred eeeeeeeeccccceEEEEEEecCCCc---EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGI---EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.+...+.||+|+||.||+|....++. .+++|.++... .....+.+..|++++++++|+|++++.+++... ..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 80 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY---TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KP 80 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CC
Confidence 44677999999999999999876554 78999876442 344457788999999999999999999998544 45
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.+++||++++++|.+++... ..+++..+..++.|++.|+.+||+.+ ++|+||+|+|++++.+ +.++++|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dlkp~Nili~~~-~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN--YVHRDLAARNILVNSN-LECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccchhhEEEcCC-CcEEECCCccceec
Confidence 78899999999999988653 56899999999999999999999999 9999999999999865 58999999999876
Q ss_pred cccceeeee--------cccCccccCCCccccccceeeec
Q 027788 182 GRAIRRIRC--------WGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~diws~g 213 (219)
......... ...+++......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG 197 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFG 197 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHH
Confidence 543221100 11223334445677789999999
No 202
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=1.7e-28 Score=196.94 Aligned_cols=185 Identities=25% Similarity=0.379 Sum_probs=147.4
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+..+| ++.+.||+|+||.||+|.+..+++.||+|.++..... ......+.+|+.++++++|+|++++++++..+..+
T Consensus 5 ~~~~y-~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (309)
T cd07845 5 SVTEF-EKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER--DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD 81 (309)
T ss_pred cccce-eEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC--CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence 44555 7779999999999999999999999999998754422 22223456799999999999999999998766656
Q ss_pred eEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++++||+++ ++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~kL~dfg~~~~ 157 (309)
T cd07845 82 SIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF--IIHRDLKVSNLLLTDK-GCLKIADFGLART 157 (309)
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECccceeee
Confidence 7899999996 578777664 356899999999999999999999999 9999999999999855 6899999999987
Q ss_pred cccccee------eeecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... +..+.+|+.......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 196 (309)
T cd07845 158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVG 196 (309)
T ss_pred cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHH
Confidence 7543211 11233444344445677889999999
No 203
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=3.3e-28 Score=194.25 Aligned_cols=186 Identities=24% Similarity=0.380 Sum_probs=149.7
Q ss_pred ccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 17 FIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 17 ~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
...+++..+| .+.+.||+|++|.||+|.+..++..+++|.+..... ...+.+..|+.+++.+.|+|++++++.+.
T Consensus 13 ~~~~~~~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~ 87 (296)
T cd06654 13 VSVGDPKKKY-TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----PKKELIINEILVMRENKNPNIVNYLDSYL 87 (296)
T ss_pred cccCCcccce-eeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc----chHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 3456677777 666999999999999999999999999998875432 23466888999999999999999999885
Q ss_pred cCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
. ....+++|||+++++|.+++.. ..++...+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||
T Consensus 88 ~--~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g--i~H~dLkp~Nill~~~-~~~kl~dfg 161 (296)
T cd06654 88 V--GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFG 161 (296)
T ss_pred e--CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCC-CCEEECccc
Confidence 4 4568899999999999998764 35789999999999999999999999 9999999999999855 589999999
Q ss_pred cceeccccce------eeeecccCccccCCCccccccceeeecc
Q 027788 177 VAAIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 177 ~a~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++........ ++..+.+| +......++.++|+||+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~s~Gv 204 (296)
T cd06654 162 FCAQITPEQSKRSTMVGTPYWMAP-EVVTRKAYGPKVDIWSLGI 204 (296)
T ss_pred cchhccccccccCcccCCccccCH-HHHcCCCCCccchHHHHHH
Confidence 9876543321 11122333 3344455677899999993
No 204
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=4.7e-28 Score=188.87 Aligned_cols=179 Identities=22% Similarity=0.337 Sum_probs=146.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||+|.+..++..+++|.+..... .....+.+..|+.+++.++|||++++++.+. ..+..++++
T Consensus 3 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~lv~ 78 (256)
T cd08220 3 EKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--TKDERLAAQNECQVLKLLSHPNIIEYYENFL--EDKALMIVM 78 (256)
T ss_pred eEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--ccHHHHHHHHHHHHHhhCCCCchhheeeeEe--cCCEEEEEE
Confidence 677899999999999999999999999999875543 2344678899999999999999999998884 446788999
Q ss_pred ccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|++++++|.+++... ..+++..+..++.|++.++.+||+++ ++|+||+|+||+++.+.+.++++|||++.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL--ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 999999999988653 34889999999999999999999999 99999999999998665567999999998775543
Q ss_pred ee-----eeecccCccccCCCccccccceeeec
Q 027788 186 RR-----IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~-----~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. ...+.+| +......++.++|+||+|
T Consensus 157 ~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 188 (256)
T cd08220 157 KAYTVVGTPCYISP-ELCEGKPYNQKSDIWALG 188 (256)
T ss_pred cccccccCCcccCc-hhccCCCCCcccchHHHH
Confidence 21 1123333 333445567789999999
No 205
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=3.9e-28 Score=194.68 Aligned_cols=189 Identities=24% Similarity=0.383 Sum_probs=149.1
Q ss_pred ccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 17 FIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 17 ~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
....++..+| ++.+.||+|+||.||+|....+++.|++|.+..... ......+.+.+|+++++.++|||++++.+++.
T Consensus 8 ~~~~~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~ 85 (307)
T cd06607 8 FSKDDPEKLF-TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL 85 (307)
T ss_pred hcCCCcchhh-hhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc-CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE
Confidence 3345566665 777999999999999999988999999998864322 23445577889999999999999999999986
Q ss_pred cCCCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
.. +..++++||++ |++.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+||
T Consensus 86 ~~--~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~--i~H~dl~p~nIl~~~~-~~~kL~df 159 (307)
T cd06607 86 RE--HTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE--RIHRDIKAGNILLTEP-GTVKLADF 159 (307)
T ss_pred eC--CeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEECCC-CCEEEeec
Confidence 54 45788999997 566666543 456899999999999999999999999 9999999999999865 58999999
Q ss_pred ccceeccccce--eeeecccCcccc--CCCccccccceeeec
Q 027788 176 GVAAIVGRAIR--RIRCWGRRSSWR--RSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~diws~g 213 (219)
|++........ +...+.+|+.+. ....++.++|+||+|
T Consensus 160 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G 201 (307)
T cd06607 160 GSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201 (307)
T ss_pred CcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHH
Confidence 99976644322 222344454442 245577789999999
No 206
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=2.7e-28 Score=193.26 Aligned_cols=179 Identities=23% Similarity=0.412 Sum_probs=147.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|.+..++..+++|.+..... .......+.+|+.+++.++|||++++++++.. ...++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v 77 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLV 77 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEE
Confidence 3788999999999999999999999999999876542 23445778899999999999999999999854 4668899
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+|++ +++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++.......
T Consensus 78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~~~~~-~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG--IMHRDLKPANLLISAD-GVLKIADFGLARLFSEEE 153 (286)
T ss_pred eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCHHHEEEcCC-CcEEEeeeeecccccCCC
Confidence 9999 8999998754 356899999999999999999999999 9999999999999865 589999999998775543
Q ss_pred e-------eeeecccCccccCCCccccccceeeec
Q 027788 186 R-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+|+.+.....++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 188 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVG 188 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHH
Confidence 1 122233444444455567789999999
No 207
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=1.1e-28 Score=194.92 Aligned_cols=174 Identities=16% Similarity=0.235 Sum_probs=134.6
Q ss_pred eeccccceEEEEEEecC------------------------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC
Q 027788 32 LLGSGAVKKVYRAFDQE------------------------EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN 87 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 87 (219)
.||+|+||.||+|.... ....|++|.++.. .......+..|+.+++.++|||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS----HRDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH----HHHHHHHHHHHHHHHhcCCCCC
Confidence 68999999999987422 2245888887643 2334467888999999999999
Q ss_pred ceEEEEEEecCCCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 88 IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 88 i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
|+++++++... ...+++|||+++++|..++.. .+.+++..+..++.|++.|+.|||+++ ++||||||+||+++..
T Consensus 78 iv~~~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiH~dlkp~Nill~~~ 153 (274)
T cd05076 78 LAFVHGVCVRG--SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN--LVHGNVCAKNILLARL 153 (274)
T ss_pred eeeEEEEEEeC--CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC--ccCCCCCcccEEEecc
Confidence 99999998654 457789999999999988765 456889999999999999999999999 9999999999999743
Q ss_pred C------CcEEEeccccceeccccce--eeeecccCccccCCCccccccceeeec
Q 027788 167 T------GQVKIGDLGVAAIVGRAIR--RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 167 ~------~~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ..++++|||++........ .+..+.+|+.......++.++|+||||
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG 208 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFG 208 (274)
T ss_pred CcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHH
Confidence 1 2379999998865533222 223344554444446678889999999
No 208
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=5.4e-28 Score=190.07 Aligned_cols=176 Identities=24% Similarity=0.390 Sum_probs=141.7
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
...||+|+||.||+|.+..++..|++|.++.. .....+.+.+|+.+++.++|+||+++++.+.. .+.+++++|+
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPER----DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCC----CHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCEEEEEEec
Confidence 35899999999999999999999999987744 23445778899999999999999999998854 4568899999
Q ss_pred ccCCChHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 110 CTSGNLREYRKKH-RHV--SVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 110 ~~~g~L~~~~~~~-~~~--~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+++++|.+++... ..+ ++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+.+.++|+|||++........
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 9999999988653 345 78888999999999999999999 999999999999986556899999999876543221
Q ss_pred ------eeeecccCccccCC-Cccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
++..+.+|+.+... ..++.++|+||+|
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slG 198 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLG 198 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHH
Confidence 22233344443332 3467789999999
No 209
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=2.4e-28 Score=194.85 Aligned_cols=181 Identities=23% Similarity=0.363 Sum_probs=140.1
Q ss_pred CCceeeeeeeeccccceEEEEEEec----------------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQ----------------EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK 86 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~----------------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 86 (219)
.++| .+.+.||+|+||.||++.+. .+...+|+|.+.... .....+.+.+|+.+++.++|+
T Consensus 4 ~~~~-~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~~E~~~l~~l~~~ 79 (296)
T cd05095 4 RKRL-TFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA---NKNARNDFLKEIKIMSRLKDP 79 (296)
T ss_pred hhhc-eeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCC
Confidence 3454 78899999999999998543 234578999877442 344557889999999999999
Q ss_pred CceEEEEEEecCCCceEEEEeccccCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeC
Q 027788 87 NIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHR-----------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRD 155 (219)
Q Consensus 87 ~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-----------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~d 155 (219)
|++++++++... ...+++||++++++|.+++.... .+++..+..++.|++.|+.+||+.+ ++|+|
T Consensus 80 ~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~d 155 (296)
T cd05095 80 NIIRLLAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN--FVHRD 155 (296)
T ss_pred CcceEEEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC--eeccc
Confidence 999999988554 45788999999999999886532 3567789999999999999999999 99999
Q ss_pred CCCCceEEeCCCCcEEEeccccceecccccee--e------eecccCccccCCCccccccceeeec
Q 027788 156 LNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR--I------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 156 l~~~nili~~~~~~~~l~dfg~a~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|||+||+++.+ +.++++|||++..+...... . ..+.+|+ ......++.++|+||+|
T Consensus 156 lkp~Nili~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe-~~~~~~~~~~~DiwSlG 219 (296)
T cd05095 156 LATRNCLVGKN-YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWE-SILLGKFTTASDVWAFG 219 (296)
T ss_pred CChheEEEcCC-CCEEeccCcccccccCCcceeccCcCcCccccCCHH-HHhcCCccchhhhhHHH
Confidence 99999999855 58999999999866443210 0 1122222 22334577789999999
No 210
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96 E-value=2.4e-28 Score=195.03 Aligned_cols=178 Identities=24% Similarity=0.409 Sum_probs=139.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCc--EEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGI--EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 103 (219)
+.+.+.||+|+||.||+|....++. .+++|.++... .....+.+..|+.++.++ +|||++++++.+.. ...+
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~ 78 (297)
T cd05089 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA---SENDHRDFAGELEVLCKLGHHPNIINLLGACEN--RGYL 78 (297)
T ss_pred ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC---CHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc--CCcc
Confidence 3788999999999999999877664 46888766322 334457788999999999 79999999998854 4557
Q ss_pred EEEeccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC
Q 027788 104 NFITEVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT 167 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~ 167 (219)
++++||+++++|.+++.... .+++..+..++.|++.|+.+||+.+ ++|+||||+|++++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nill~~~- 155 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ--FIHRDLAARNVLVGEN- 155 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCcCCcceEEECCC-
Confidence 88999999999999886432 4778899999999999999999999 9999999999999865
Q ss_pred CcEEEeccccceecccccee----ee-ecccCccccCCCccccccceeeec
Q 027788 168 GQVKIGDLGVAAIVGRAIRR----IR-CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 168 ~~~~l~dfg~a~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.++|+|||++......... .. .+.+ ++......++.++|+||||
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwSlG 205 (297)
T cd05089 156 LASKIADFGLSRGEEVYVKKTMGRLPVRWMA-IESLNYSVYTTKSDVWSFG 205 (297)
T ss_pred CeEEECCcCCCccccceeccCCCCcCccccC-chhhccCCCCchhhHHHHH
Confidence 58999999998654322111 11 1223 3344455577889999999
No 211
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.3e-30 Score=196.65 Aligned_cols=186 Identities=20% Similarity=0.322 Sum_probs=159.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.++||+|.||+|.+++.+.+++.+|+|++++...-. -+.+.+.+.|..+|+..+||.+..+...|+. ++.+|+||
T Consensus 171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia-kdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt--~drlCFVM 247 (516)
T KOG0690|consen 171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA-KDEVAHTLTENRVLQNCRHPFLTSLKYSFQT--QDRLCFVM 247 (516)
T ss_pred hHHHHhcCCccceEEEEeecccCceeehhhhhhhheee-hHHhhhhhhHHHHHHhccCcHHHHhhhhhcc--CceEEEEE
Confidence 55678999999999999999999999999999776543 3456888999999999999999999888854 46699999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
||..||.|+-.++..+.+++...+.+-..|++||.|||+++ |++||||.+|++++++ |.+||.|||+++--.....
T Consensus 248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~--ivYRDlKLENLlLDkD-GHIKitDFGLCKE~I~~g~t 324 (516)
T KOG0690|consen 248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN--IVYRDLKLENLLLDKD-GHIKITDFGLCKEEIKYGDT 324 (516)
T ss_pred EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC--eeeeechhhhheeccC-CceEeeecccchhcccccce
Confidence 99999999998998889999999999999999999999999 9999999999999977 6999999999987655443
Q ss_pred eeeecccCcc----ccCCCccccccceeeec--cccccC
Q 027788 187 RIRCWGRRSS----WRRSCTMRITRSLWTYT--RLGCAC 219 (219)
Q Consensus 187 ~~~~~~~~~~----~~~~~~~~~~~diws~g--i~~~~c 219 (219)
-.+.+|+|+. ......|...-|-|++| ++.+-|
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmC 363 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMC 363 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHh
Confidence 4456788764 35567788889999999 444433
No 212
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=3e-28 Score=196.01 Aligned_cols=150 Identities=20% Similarity=0.373 Sum_probs=130.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|.+..++..+|+|.+...... .....+.+..|+++++.++|+||+++++.+. .....+++
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv 79 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-KRNKVKRVLTEQEILATLDHPFLPTLYASFQ--TETYLCLV 79 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-hHHHHHHHHHHHHHHHhCCCCCchhheeeee--cCCEEEEE
Confidence 47779999999999999999999999999998865432 2235577899999999999999999998884 45678899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
||++.+++|.+++... ..+++.....++.|++.++.|||..+ ++|+||||+||+++.+ +.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~-~~~~l~dfg~~~~~~ 154 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG--IVYRDLKPENILLHES-GHIMLSDFDLSKQSD 154 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChHHeEEcCC-CCEEEeecchhhccc
Confidence 9999999999988654 46889999999999999999999999 9999999999999865 689999999987654
No 213
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=3.4e-28 Score=192.18 Aligned_cols=182 Identities=20% Similarity=0.268 Sum_probs=143.0
Q ss_pred ceeeeeeeeccccceEEEEEEecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQE-----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
+.+.+.+.||+|++|.||+|.... ++..|++|.+.... .......+.+|+.+++.++|+|++++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 81 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC---SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER- 81 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC-
Confidence 445788999999999999999876 67889999876432 233446688999999999999999999988544
Q ss_pred CceEEEEeccccCCChHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcE
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHR-------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQV 170 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~-------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~ 170 (219)
...+++||++++++|.+++.... .+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+. ..+
T Consensus 82 -~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 -LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH--FIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred -CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccchheEEEeccCCCcce
Confidence 44678999999999999886542 4788999999999999999999999 99999999999997442 258
Q ss_pred EEeccccceecccccee--e-----eecccCccccCCCccccccceeeec
Q 027788 171 KIGDLGVAAIVGRAIRR--I-----RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 171 ~l~dfg~a~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+++|||+++........ . .....+++......++.++||||||
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 208 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFG 208 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHH
Confidence 99999999876332210 0 0112233444556678889999999
No 214
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=3.8e-28 Score=191.27 Aligned_cols=182 Identities=24% Similarity=0.386 Sum_probs=145.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC------CHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD------DPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~------~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
|.+.+.||+|++|.||+|.+..+++.+|+|.++...... .....+.+..|+.+++.++|+|++++++++. ..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~ 80 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--TE 80 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec--cC
Confidence 367789999999999999998899999999886532211 1123456888999999999999999999884 44
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
+.++++|||+++++|.+++.....++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++..
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~d~~~~~~ 157 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG--ILHRDLKADNLLVDAD-GICKISDFGISKK 157 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eeecCCChhhEEEcCC-CeEEEeecccccc
Confidence 668889999999999999887778999999999999999999999999 9999999999999865 5899999999976
Q ss_pred ccccce--------eeeecccCccccCC-Cccccccceeeec
Q 027788 181 VGRAIR--------RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
...... +...+.+|+..... ..++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG 199 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLG 199 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHH
Confidence 543211 11122334333322 2467789999999
No 215
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=4.2e-28 Score=191.38 Aligned_cols=179 Identities=20% Similarity=0.315 Sum_probs=141.2
Q ss_pred eeeeeeeeccccceEEEEEEecCC-----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEE-----GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
.+.+.+.||+|+||.||+|..... +..+|+|.+.... .......+.+|+.+++.++|+|++++++++.. .
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 81 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--G 81 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC--C
Confidence 347889999999999999987643 4789999876432 33445678899999999999999999999854 4
Q ss_pred ceEEEEeccccCCChHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcE
Q 027788 101 NTLNFITEVCTSGNLREYRKKHR----------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQV 170 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~----------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~ 170 (219)
...+++|||+++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~di~p~nill~~~-~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK--FVHRDLAARNCMVAED-LTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccChheEEEcCC-CCE
Confidence 56788999999999999875432 3577889999999999999999999 9999999999999866 689
Q ss_pred EEeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 171 KIGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 171 ~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+|+|||+++....... .+..+.+| +......++.++|+||||
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 208 (277)
T cd05032 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP-ESLKDGVFTTKSDVWSFG 208 (277)
T ss_pred EECCcccchhhccCcccccCCCCCccccccCH-HHHhcCCCCcccchHHHH
Confidence 9999999876543321 11122333 333445577789999999
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=2.8e-28 Score=191.35 Aligned_cols=181 Identities=28% Similarity=0.399 Sum_probs=144.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC--CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
|++.+.||+|+||.||+|.. .++..+|+|.++..... ........+.+|+++++.++|+|++++.+++.. ...++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 78 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNTIS 78 (265)
T ss_pred ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCeEE
Confidence 36778999999999999985 57889999998754321 123344678899999999999999999999854 46788
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+++|++++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++|+|||++......
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC--VVHRDIKGNNVMLMPN-GIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHhEEECCC-CeEEeccchhhHhhhhc
Confidence 99999999999999887778899999999999999999999999 9999999999999855 68999999998765321
Q ss_pred ce------------eeeecccCccccCCCccccccceeeecc
Q 027788 185 IR------------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~------------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.. ++..+ .+++......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~pe~~~~~~~~~~~Dv~slG~ 196 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYW-MAPEVINESGYGRKSDIWSIGC 196 (265)
T ss_pred cccccccccccccCCCccc-cChhhhcCCCCcchhhHHHHHH
Confidence 10 11112 2334445555678899999993
No 217
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=5e-28 Score=193.88 Aligned_cols=180 Identities=18% Similarity=0.272 Sum_probs=145.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||++.+..+++.|++|.+...... .....+.+.+|+.+++.++||||+++++.+. ....++++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~lv 79 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLI-LRNQIQQVFVERDILTFAENPFVVSMFCSFE--TKRHLCMV 79 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhh-hHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe--cCCEEEEE
Confidence 36779999999999999999999999999998754321 2334567889999999999999999998884 45678899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc-
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI- 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~- 185 (219)
||++++++|.+++...+.+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~NIll~~~-~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHEEECCC-CCEEEeeCCCccccCcCcc
Confidence 999999999999987778999999999999999999999999 9999999999999855 689999999886421100
Q ss_pred --------------------eeeeecccCccccCCCccccccceeeec
Q 027788 186 --------------------RRIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 --------------------~~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+...+.+| +......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 203 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAP-EVILRQGYGKPVDWWAMG 203 (305)
T ss_pred ccccccccccchhhccccCCccCccccCc-hhccCCCCCchhhHHHHH
Confidence 011112223 333445677889999999
No 218
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=1.9e-28 Score=193.66 Aligned_cols=179 Identities=22% Similarity=0.286 Sum_probs=143.2
Q ss_pred eeeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
.+.+.+.||+|+||.||+|... .++..+|+|.++... .....+.+.+|+++++.++|+|++++++.+...
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 80 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA---SNDARKDFEREAELLTNFQHENIVKFYGVCTEG-- 80 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC---CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--
Confidence 3477789999999999999764 346789999887543 233457889999999999999999999998544
Q ss_pred ceEEEEeccccCCChHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 101 NTLNFITEVCTSGNLREYRKKH--------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~--------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
...+++|||+++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~h~dlkp~nili~~~ 158 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH--FVHRDLATRNCLVGYD 158 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eeccccccceEEEcCC
Confidence 5688999999999999988653 23678889999999999999999999 9999999999999866
Q ss_pred CCcEEEeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 167 TGQVKIGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.++|+|||++........ ....+.+| +......++.++|+||+|
T Consensus 159 -~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 211 (280)
T cd05049 159 -LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPP-ESIMYRKFTTESDVWSFG 211 (280)
T ss_pred -CeEEECCcccceecccCcceecCCCCcccceecCh-hhhccCCcchhhhHHHHH
Confidence 6899999999986533221 01123333 444556678889999999
No 219
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.5e-28 Score=206.27 Aligned_cols=170 Identities=19% Similarity=0.264 Sum_probs=137.4
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+.++++++|+||+++++++... ...+++
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~~~lv 238 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------ASSVHEARLLRRLSHPAVLALLDVRVVG--GLTCLV 238 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cCHHHHHHHHHHCCCCCCCcEEEEEEEC--CEEEEE
Confidence 4888999999999999999999999999995321 2345799999999999999999988554 457789
Q ss_pred eccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||++. ++|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.+ +.++|+|||+++......
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDLKP~NILl~~~-~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG--IIHRDIKTENVLVNGP-EDICLGDFGAACFARGSW 314 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--EEECcCCHHHEEECCC-CCEEEcccCCceeccccc
Confidence 99995 6887776543 46899999999999999999999999 9999999999999865 589999999998764322
Q ss_pred e--------eeeecccCccccCCCccccccceeeec
Q 027788 186 R--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ++..+.+|+ ......++.++|+||||
T Consensus 315 ~~~~~~~~~GT~~Y~APE-~~~~~~~~~~sDvwSlG 349 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPE-VLAGDPYTPSVDIWSAG 349 (461)
T ss_pred ccccccccCCCcCCcCHH-HHcCCCCCchHHHHHHH
Confidence 1 222233333 33455678889999999
No 220
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.3e-28 Score=201.56 Aligned_cols=171 Identities=23% Similarity=0.272 Sum_probs=137.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..++..||+|..... ....|+.++++++|+||+++++++... ...+++
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----------~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 135 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----------TTLIEAMLLQNVNHPSVIRMKDTLVSG--AITCMV 135 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----------ccHHHHHHHHhCCCCCCcChhheEEeC--CeeEEE
Confidence 48889999999999999999999999999974321 134699999999999999999998644 457889
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+|++. ++|.+++.. ...+++..+..++.|++.||.|||..+ ++||||||+||+++.+ +.++|+|||+++......
T Consensus 136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~-~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR--IIHRDVKTENIFINDV-DQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEecCccccccccCc
Confidence 99995 577776643 457899999999999999999999999 9999999999999865 589999999997543222
Q ss_pred e-----eeeecccCccccCCCccccccceeeecc
Q 027788 186 R-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. ++..+.+|+ ......++.++|+||+|+
T Consensus 212 ~~~~~~gt~~y~aPE-~~~~~~~~~~~DiwSlGv 244 (357)
T PHA03209 212 AFLGLAGTVETNAPE-VLARDKYNSKADIWSAGI 244 (357)
T ss_pred ccccccccccccCCe-ecCCCCCCchhhHHHHHH
Confidence 1 222334443 344456788899999993
No 221
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=4.1e-28 Score=192.15 Aligned_cols=177 Identities=19% Similarity=0.311 Sum_probs=136.4
Q ss_pred eeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh---hCCCCceEEEEEEecCCCceEEEEec
Q 027788 32 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKT---LANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~---l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
.||+|+||.||++.+..+++.+|+|.+........ .....+..|..+++. ..||+++.+.+.+..+ +..+++||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccc-hHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEEEEEe
Confidence 48999999999999999999999999875443211 112333445444433 4789999998888544 45788999
Q ss_pred cccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--
Q 027788 109 VCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-- 186 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-- 186 (219)
|+++++|.+++.....+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++++|||++........
T Consensus 78 ~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~--ivH~dikp~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~ 154 (279)
T cd05633 78 LMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKKKPHA 154 (279)
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCCCCCHHHEEECCC-CCEEEccCCcceeccccCccC
Confidence 9999999998887778999999999999999999999999 9999999999999855 5899999999876543221
Q ss_pred --eeeecccCccccCCCccccccceeeecc
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
++..+.+|+.......++.++|+||+|+
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 184 (279)
T cd05633 155 SVGTHGYMAPEVLQKGTAYDSSADWFSLGC 184 (279)
T ss_pred cCCCcCccCHHHhcCCCCCCchhhhHHHHH
Confidence 2223334443434455778899999993
No 222
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=2.5e-28 Score=194.13 Aligned_cols=180 Identities=24% Similarity=0.405 Sum_probs=142.3
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|++|.||+|.+..+++.||+|.+...... .....+.+|++++++++|+||+++++++. +.+..
T Consensus 5 ~~y-~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~ 78 (291)
T cd07844 5 ETY-KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFTAIREASLLKDLKHANIVTLHDIIH--TKKTL 78 (291)
T ss_pred cce-eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchhHHHHHHHHhhCCCcceeeEEEEEe--cCCeE
Confidence 345 6779999999999999999989999999998754321 11234668999999999999999999985 44678
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++|||++ ++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~ 154 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR--VLHRDLKPQNLLISER-GELKLADFGLARAKS 154 (291)
T ss_pred EEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCHHHEEEcCC-CCEEECccccccccC
Confidence 89999997 4888877653 46789999999999999999999999 9999999999999865 589999999987643
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .+..+.+|+.......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG 191 (291)
T cd07844 155 VPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVG 191 (291)
T ss_pred CCCccccccccccccCCcHHhhcCcccCcHHHHHHHH
Confidence 2211 112233344334445577789999999
No 223
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.96 E-value=7.3e-30 Score=195.95 Aligned_cols=184 Identities=25% Similarity=0.358 Sum_probs=144.2
Q ss_pred eeeeeeeccccceEEEEEEecCCC----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEG----IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
|++..+||+|+||.||+|...++. +++|+|.++.... ..+.....-+|+.+++.++|||++.+..+|... ...
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd--~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d~~ 102 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD--GTGISMSACREIALLRELKHPNVISLVKVFLSH-DKK 102 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC--CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-Cce
Confidence 367789999999999999765443 3789998886543 223334456799999999999999999888754 467
Q ss_pred EEEEeccccCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC---CCcEEEec
Q 027788 103 LNFITEVCTSGNLREYRKKH-----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN---TGQVKIGD 174 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~---~~~~~l~d 174 (219)
+++++||.+ .+|...+.-+ ..++...+..++.|++.|+.|||++. ++||||||.||++..+ .|.|||+|
T Consensus 103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW--vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW--VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh--eeeccCCcceEEEeccCCccCeeEeec
Confidence 899999997 4887776533 35888999999999999999999999 9999999999999744 36899999
Q ss_pred cccceecccccee---------eeecccCccccCCCccccccceeeec-ccc
Q 027788 175 LGVAAIVGRAIRR---------IRCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 175 fg~a~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
||+++.+..+... +..+++|+-...++-|+.+-|+|+.| |+|
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfa 231 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFA 231 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHH
Confidence 9999999877642 23344444455556678888888888 554
No 224
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=4.1e-28 Score=192.84 Aligned_cols=179 Identities=20% Similarity=0.312 Sum_probs=138.7
Q ss_pred eeeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
.|.+.+.||+|+||.||+|... ..+..||+|.++... .......+.+|+.+++.++|+|++++++.+...
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 3478899999999999998754 235589999876432 233445678899999999999999999988544
Q ss_pred ceEEEEeccccCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcE
Q 027788 101 NTLNFITEVCTSGNLREYRKKH----------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQV 170 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~----------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~ 170 (219)
...+++|||+++|+|.+++... .......+..++.|++.|+.|||+++ ++|+||||+||+++.+ +.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dikp~nili~~~-~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHD-FTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCCChheEEEcCC-CcE
Confidence 4578899999999999998642 22456778889999999999999999 9999999999999865 589
Q ss_pred EEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 171 KIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 171 ~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+++|||+++........ ...+.+ ++......++.++|+||+|
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~-pE~~~~~~~~~~~DvwslG 208 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMA-PESLKDGVFTTSSDMWSFG 208 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccC-HHHhccCCCChHhHHHHHH
Confidence 99999998865432210 111222 3344455677789999999
No 225
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=6e-28 Score=192.17 Aligned_cols=177 Identities=25% Similarity=0.330 Sum_probs=141.0
Q ss_pred eeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+.+.+.||+|+||.||+|... .++..+++|.+... .....+.+.+|+.++++++|+|++++++++.. ..
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 80 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREAELLTNLQHEHIVKFYGVCGD--GD 80 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--CC
Confidence 578899999999999999743 34567888887633 34445678899999999999999999999854 45
Q ss_pred eEEEEeccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 102 TLNFITEVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
..+++|||+++++|.+++..+. .+++..+..++.|++.++.+||+++ ++|+||||+||+++.
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~--i~H~dlkp~Nil~~~ 158 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGA 158 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccCcceEEEcc
Confidence 5788999999999999986532 3788899999999999999999999 999999999999986
Q ss_pred CCCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 166 NTGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+ +.++|+|||++......... ...+.+ ++......++.++|+||+|
T Consensus 159 ~-~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG 212 (291)
T cd05094 159 N-LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP-PESIMYRKFTTESDVWSFG 212 (291)
T ss_pred C-CcEEECCCCcccccCCCceeecCCCCCcceeecC-hHHhccCCCCchhhHHHHH
Confidence 6 58999999999765443211 111223 3344455677789999999
No 226
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.2e-28 Score=195.25 Aligned_cols=153 Identities=22% Similarity=0.344 Sum_probs=136.5
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.-+.+++.+.||+|..|+||+|+...++..+|+|++.+.... ....+.+...|.++|+.++||.+..++..| +..++
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~-~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f--et~~~ 151 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA-SRKKLKRAQTEREILSLLDHPFLPTLYASF--ETDKY 151 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHh-hhhHHHHHHHHHHHHHhcCCCccchhhhee--eccce
Confidence 344557788999999999999999999999999999876654 355678889999999999999999999999 55678
Q ss_pred EEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 103 LNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.+++||||+||+|..+++++ ..++++.+++++..|+.||+|||..| |++|||||+|||+-.+ |.+.|+||.++..
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG--ivYRDLKPENILvred-GHIMLsDFDLS~~ 228 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG--IVYRDLKPENILVRED-GHIMLSDFDLSLR 228 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc--eeeccCCcceeEEecC-CcEEeeecccccc
Confidence 99999999999999988765 46999999999999999999999999 9999999999999855 7999999998876
Q ss_pred c
Q 027788 181 V 181 (219)
Q Consensus 181 ~ 181 (219)
.
T Consensus 229 ~ 229 (459)
T KOG0610|consen 229 C 229 (459)
T ss_pred C
Confidence 6
No 227
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.5e-28 Score=201.27 Aligned_cols=172 Identities=19% Similarity=0.274 Sum_probs=137.8
Q ss_pred eeeeeeeeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.|.+.+.||+|+||.||+|... .++..|++|.+... ....+|+.++++++||||+++++.+.. ...+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---------~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~ 161 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---------KTPGREIDILKTISHRAIINLIHAYRW--KSTV 161 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---------ccHHHHHHHHHhcCCCCccceeeeEee--CCEE
Confidence 3488899999999999999753 45678999976532 223479999999999999999998854 4568
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++||++. ++|..++.....+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.++|+|||++.....
T Consensus 162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g--ivHrDlkp~Nill~~~-~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG--IIHRDVKTENIFLDEP-ENAVLGDFGAACKLDA 237 (392)
T ss_pred EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEccCccccccCc
Confidence 88999995 688888876778999999999999999999999999 9999999999999865 5899999999977654
Q ss_pred cce--------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+.+| +......++.++|+||+|
T Consensus 238 ~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~DvwslG 274 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSP-ELLALDPYCAKTDIWSAG 274 (392)
T ss_pred ccccccccccccccCccCH-hHhcCCCCCchhhHHHHH
Confidence 322 11122233 344455677889999999
No 228
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=2e-28 Score=191.27 Aligned_cols=173 Identities=19% Similarity=0.314 Sum_probs=136.7
Q ss_pred eeeccccceEEEEEEecCCC----------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 31 ELLGSGAVKKVYRAFDQEEG----------IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~----------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
+.||+|+||.||+|....++ ..+++|.+.... .....+.+|+.+++.++|||++++++.+..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RDSLAFFETASLMSQLSHKHLVKLYGVCVR--- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hhHHHHHHHHHHHHcCCCcchhheeeEEec---
Confidence 46899999999999987766 357777665332 115778899999999999999999998865
Q ss_pred ceEEEEeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC------cEEEe
Q 027788 101 NTLNFITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG------QVKIG 173 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~------~~~l~ 173 (219)
...++++||+++++|.+++.... .++...+..++.|++.|+.|||+++ ++|+||||+||+++.+.. .++++
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK--LVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC--eecccCccceEEEecCccccCCceeEEeC
Confidence 33578999999999999987665 6899999999999999999999999 999999999999985531 58999
Q ss_pred ccccceeccccce--eeeecccCccccCC-Cccccccceeeec
Q 027788 174 DLGVAAIVGRAIR--RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
|||++........ ....+.+|+.+... ..++.++|+||+|
T Consensus 151 Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG 193 (259)
T cd05037 151 DPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFG 193 (259)
T ss_pred CCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHH
Confidence 9999987654221 22233444433333 3677789999999
No 229
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.96 E-value=1.3e-28 Score=193.30 Aligned_cols=180 Identities=26% Similarity=0.439 Sum_probs=144.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|....++..+++|.+..... .+.....++.+|+.+++.++|+|++++++.+... +..+++
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~~~v 80 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--NELNIV 80 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--CeEEEE
Confidence 3677899999999999999999999999998775332 1334457788999999999999999999988544 467889
Q ss_pred eccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
||++++++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITAT-GVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CCEEECcchhhhccc
Confidence 999999999988753 245789999999999999999999999 9999999999999865 589999999987664
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... +...+.+ +++.....++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~a-pe~~~~~~~~~~~Dv~slG 193 (267)
T cd08229 158 SKTTAAHSLVGTPYYMS-PERIHENGYNFKSDIWSLG 193 (267)
T ss_pred cCCcccccccCCcCccC-HHHhcCCCccchhhHHHHH
Confidence 4321 1111222 3344455677789999999
No 230
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=4.9e-28 Score=189.03 Aligned_cols=177 Identities=21% Similarity=0.353 Sum_probs=144.4
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+.+++.+.||.|++|.||+|... ++.+|+|.++... ...+++.+|+.+++.++|+|++++++.+.. ....
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~ 75 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS-----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPL 75 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccch-----hHHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCe
Confidence 445588899999999999999764 7889999987432 245788999999999999999999999854 4567
Q ss_pred EEEeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++||++++++|.+++.... .+++..+..++.|++.++.|||..+ ++|+||+|+||+++.+ +.++|+|||.++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~--i~H~di~p~Nili~~~-~~~~l~d~g~~~~~ 152 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN--FVHRDLAARNVLVSED-LVAKVSDFGLAKEA 152 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccchhcccceEEEeCC-CCEEEccccccccc
Confidence 88999999999999987654 6899999999999999999999999 9999999999999855 58999999999877
Q ss_pred ccccee---eeecccCccccCCCccccccceeeec
Q 027788 182 GRAIRR---IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~---~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...... ...+.+| +......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~ap-e~~~~~~~~~~~Di~slG 186 (256)
T cd05039 153 SQGQDSGKLPVKWTAP-EALREKKFSTKSDVWSFG 186 (256)
T ss_pred ccccccCCCcccccCc-hhhcCCcCCcHHHHHHHH
Confidence 443321 1112233 334455677789999999
No 231
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=5.3e-28 Score=194.52 Aligned_cols=180 Identities=29% Similarity=0.408 Sum_probs=141.1
Q ss_pred CceeeeeeeeccccceEEEEEEec-------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQ-------EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVW 95 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~ 95 (219)
.++ .+.+.||+|+||.||+|.+. .....+|+|.++... .......+..|+.+++++ +||||+++++++
T Consensus 12 ~~~-~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 12 DRL-VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---TDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred HHe-eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 445 78899999999999999753 234579999877432 344567788999999999 699999999988
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKH----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCS 159 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ 159 (219)
.. ...++++|||+++++|.+++... ..++...+..++.|++.++.|||+++ ++|+||||+
T Consensus 88 ~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~ 163 (314)
T cd05099 88 TQ--EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR--CIHRDLAAR 163 (314)
T ss_pred cc--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeeccccce
Confidence 54 45688999999999999988643 24778889999999999999999999 999999999
Q ss_pred ceEEeCCCCcEEEeccccceecccccee------e--eecccCccccCCCccccccceeeec
Q 027788 160 NVFVNGNTGQVKIGDLGVAAIVGRAIRR------I--RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 160 nili~~~~~~~~l~dfg~a~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|++++.+ +.++|+|||+++........ . ..+.+| +......++.++|+||+|
T Consensus 164 Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~DiwslG 223 (314)
T cd05099 164 NVLVTED-NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP-EALFDRVYTHQSDVWSFG 223 (314)
T ss_pred eEEEcCC-CcEEEccccccccccccccccccccCCCCccccCH-HHHccCCcCccchhhHHH
Confidence 9999865 58999999999866432210 0 123333 333445677789999999
No 232
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=5.3e-28 Score=188.90 Aligned_cols=176 Identities=22% Similarity=0.313 Sum_probs=139.4
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|+||.||++... ++..+|+|.+.... ...+.+.+|+.++++++|||++++++++. ....++++
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~iv 77 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-----MSEEDFIEEAKVMMKLSHPKLVQLYGVCT--QQKPLYIV 77 (256)
T ss_pred cEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-----ccHHHHHHHHHHHHHCCCCCceeEEEEEc--cCCCEEEE
Confidence 367789999999999999864 56689999876332 12356788999999999999999999884 44568899
Q ss_pred eccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||+++++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++++|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS--FIHRDLAARNCLVSST-GVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcceEEEcCC-CeEEECCCCCccccCCCc
Confidence 999999999998864 346889999999999999999999999 9999999999999855 589999999998654332
Q ss_pred eeee------ecccCccccCCCccccccceeeec
Q 027788 186 RRIR------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~~------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ....+++......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G 188 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFG 188 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHH
Confidence 2111 112223344455677889999999
No 233
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=5.3e-28 Score=189.06 Aligned_cols=175 Identities=21% Similarity=0.346 Sum_probs=139.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
++.+.||+|+||.||.|... .+..+|+|.+..... ..+.+.+|+.++++++||||+++++++.. ...++++|
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-----SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYIVT 78 (256)
T ss_pred EEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc-----cHHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEEEE
Confidence 67789999999999999764 345699998774321 23568889999999999999999999854 34578899
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||+++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||.++.......
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~nili~~~-~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ--FIHRDLAARNCLVDDQ-GCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CCEEECCCccceecCCCce
Confidence 999999999988653 46899999999999999999999999 9999999999999865 5899999999886644321
Q ss_pred eee------ecccCccccCCCccccccceeeec
Q 027788 187 RIR------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ~~~------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ....+++......++.++|+||||
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG 188 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFG 188 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHH
Confidence 110 112233444445677789999999
No 234
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=5.7e-28 Score=195.95 Aligned_cols=185 Identities=25% Similarity=0.345 Sum_probs=143.9
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCC-------CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEE
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEE-------GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISL 91 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~ 91 (219)
....+..+++.+.||+|+||.||.|++... +..+|+|.++... .....+.+.+|+.+++++ +|+||+++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~ 83 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TDKDLSDLVSEMEMMKMIGKHKNIINL 83 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence 344455668999999999999999986432 2368999877432 344567889999999999 79999999
Q ss_pred EEEEecCCCceEEEEeccccCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeC
Q 027788 92 HYVWRDEDRNTLNFITEVCTSGNLREYRKKH----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRD 155 (219)
Q Consensus 92 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~d 155 (219)
++.+.. ...+++++||+++++|.+++... ..++...+..++.|++.|+.|||..+ ++|+|
T Consensus 84 ~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--ivH~d 159 (334)
T cd05100 84 LGACTQ--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK--CIHRD 159 (334)
T ss_pred eEEEcc--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--eeccc
Confidence 999854 45688899999999999988642 23677888899999999999999999 99999
Q ss_pred CCCCceEEeCCCCcEEEeccccceeccccce------e--eeecccCccccCCCccccccceeeec
Q 027788 156 LNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR------R--IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 156 l~~~nili~~~~~~~~l~dfg~a~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+|+||+++.+ +.++|+|||+++....... . ...+.+| +......++.++|+||+|
T Consensus 160 lkp~Nill~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 223 (334)
T cd05100 160 LAARNVLVTED-NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAP-EALFDRVYTHQSDVWSFG 223 (334)
T ss_pred cccceEEEcCC-CcEEECCcccceecccccccccccCCCcCceEcCH-HHhccCCcCchhhhHHHH
Confidence 99999999866 5899999999986643221 0 0112333 334455677789999999
No 235
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=5.3e-28 Score=188.66 Aligned_cols=181 Identities=28% Similarity=0.443 Sum_probs=146.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+..+.||+|++|.||+|....++..|++|.+...... ......+.+..|+.+++.++|+|++++.+.+. +...++++
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~lv 80 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER--EEDNLYIF 80 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe--cCCeEEEE
Confidence 5678999999999999999889999999998754321 12345577889999999999999999999884 44568889
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+||+++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN--TVHRDIKGANILVDTN-GVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEccCccceecccccc
Confidence 999999999999887777899999999999999999999999 9999999999999865 5899999999887644331
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+|+.......++.++|+||+|
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG 189 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLG 189 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHH
Confidence 112233333333222367789999999
No 236
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=4.6e-28 Score=193.92 Aligned_cols=184 Identities=27% Similarity=0.382 Sum_probs=142.8
Q ss_pred CCCCceeeeeeeeccccceEEEEEEec-------CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEE
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQ-------EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLH 92 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~-------~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~ 92 (219)
+....-+.+.+.||+|+||.||.|... ..+..+|+|.++... .....+.+.+|+.+++.+ +||||++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc---chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 344555588899999999999999742 234579999876432 234457788999999999 899999999
Q ss_pred EEEecCCCceEEEEeccccCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCC
Q 027788 93 YVWRDEDRNTLNFITEVCTSGNLREYRKKH----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDL 156 (219)
Q Consensus 93 ~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl 156 (219)
+.+... ..++++|||+++++|.+++... ..++...+..++.|++.|+.|||+.+ ++|+||
T Consensus 88 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g--ivH~dl 163 (304)
T cd05101 88 GACTQD--GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK--CIHRDL 163 (304)
T ss_pred EEEecC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC--eeeccc
Confidence 998544 5678899999999999988653 23677788999999999999999999 999999
Q ss_pred CCCceEEeCCCCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 157 NCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 157 ~~~nili~~~~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
||+||+++.+ +.++|+|||+++........ ...+.+|+ ......++.++|+||+|
T Consensus 164 kp~Nili~~~-~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG 226 (304)
T cd05101 164 AARNVLVTEN-NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFG 226 (304)
T ss_pred ccceEEEcCC-CcEEECCCccceecccccccccccCCCCCceeeCch-hhccCCCCchhhHHHHH
Confidence 9999999855 58999999999876542211 01123333 33445577789999999
No 237
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=7.2e-29 Score=194.14 Aligned_cols=175 Identities=19% Similarity=0.299 Sum_probs=137.5
Q ss_pred eeeccccceEEEEEEecCCCc-------EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGI-------EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
+.||+|+||.||+|.....+. .+++|.+... .....+.+..|+.+++.++|||++++++.+... ...
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCc
Confidence 368999999999998765443 3788876533 234456788899999999999999999998654 346
Q ss_pred EEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC-------cEEEecc
Q 027788 104 NFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG-------QVKIGDL 175 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~-------~~~l~df 175 (219)
+++|||+++|+|..++... ..+++..+..++.|++.++.|||+.+ ++|+||||+||+++.+.. .++++||
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceEEEecccccccCCCceEEeccc
Confidence 7899999999999988754 45889999999999999999999999 999999999999975532 2689999
Q ss_pred ccceeccccce--eeeecccCccccCCCccccccceeeec
Q 027788 176 GVAAIVGRAIR--RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|++........ ++..+.+|+.+.....++.++|+||+|
T Consensus 153 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (258)
T cd05078 153 GISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFG 192 (258)
T ss_pred ccccccCCchhccccCCccCchhccCCCCCCchhhHHHHH
Confidence 99876654322 223344555555445677889999999
No 238
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=3.4e-28 Score=190.03 Aligned_cols=176 Identities=20% Similarity=0.293 Sum_probs=139.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|+||.||++.+. ++..+|+|.+..... ....+.+|++++++++|+|++++++++. .....+++
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv 77 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-----SEDDFIEEAKVMMKLSHPNLVQLYGVCT--KQRPIFIV 77 (256)
T ss_pred cchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEEEEEEEEc--CCCceEEE
Confidence 467889999999999999865 567899998764322 1245778999999999999999999884 44568889
Q ss_pred eccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||++++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||+++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--FIHRDLAARNCLVGED-NVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHhhEEECCC-CcEEECCcccceeccccc
Confidence 9999999999988653 46889999999999999999999999 9999999999999855 689999999997664332
Q ss_pred eeee------ecccCccccCCCccccccceeeec
Q 027788 186 RRIR------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~~------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ....+++......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG 188 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFG 188 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHH
Confidence 1110 012223444455677789999999
No 239
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.4e-28 Score=193.81 Aligned_cols=179 Identities=22% Similarity=0.424 Sum_probs=143.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|+||.||++.+..++..+|+|.++... .......+.+|+.++++++|+|++++++.+.. .+.++++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv 77 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMC 77 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEE
Confidence 366789999999999999999899999999887542 34445778899999999999999999998854 4668899
Q ss_pred eccccCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKH---RHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
|||+++++|..++... ..+++..+..++.|++.++.|||. .+ ++|+||+|+||+++.+ +.++|+|||++..+.
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~ 154 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN--IIHRDVKPTNVLVNGN-GQVKLCDFGVSGNLV 154 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC--EeeCCCCHHHEEECCC-CCEEEeecCCccccc
Confidence 9999999998887653 368999999999999999999996 47 9999999999999865 689999999997664
Q ss_pred ccce----eeeecccCccccC-----CCccccccceeeec
Q 027788 183 RAIR----RIRCWGRRSSWRR-----SCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~----~~~~~~~~~~~~~-----~~~~~~~~diws~g 213 (219)
.... +...+.+|+.+.. ...++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG 194 (286)
T cd06622 155 ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLG 194 (286)
T ss_pred CCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHH
Confidence 3322 1122334443321 22346779999999
No 240
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=3.3e-28 Score=191.54 Aligned_cols=184 Identities=26% Similarity=0.468 Sum_probs=145.7
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCC
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDED 99 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~ 99 (219)
++.+.| .+.+.||+|+||.||+|....+++.+|+|.+.... .....+..|+.+++++ +|+|++++.+.+...+
T Consensus 3 ~~~~~y-~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (272)
T cd06637 3 DPAGIF-ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 76 (272)
T ss_pred Chhhhh-hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence 456667 67789999999999999999999999999987432 2235678899999988 6999999999886533
Q ss_pred ----CceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 100 ----RNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 100 ----~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
.+.++++|||+++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+
T Consensus 77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~--ivh~dl~~~nili~~~-~~~~l~ 153 (272)
T cd06637 77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTEN-AEVKLV 153 (272)
T ss_pred CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHEEECCC-CCEEEc
Confidence 34688999999999999988753 35889999999999999999999999 9999999999999865 589999
Q ss_pred ccccceeccccce------eeeecccCccccC----CCccccccceeeec
Q 027788 174 DLGVAAIVGRAIR------RIRCWGRRSSWRR----SCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~diws~g 213 (219)
|||++........ ++..+.+|+.... ...++.++|+||+|
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 203 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 203 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence 9999986543221 1112233332221 33567789999999
No 241
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=8.8e-28 Score=189.99 Aligned_cols=178 Identities=25% Similarity=0.425 Sum_probs=142.9
Q ss_pred eeeeeeeeccccceEEEEEEecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGI----EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
.+++.+.||+|+||.||+|....++. .+|+|.++... .......+.+|+.++++++|+|++++++++.. .
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~ 81 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET---SPKANKEILDEAYVMASVDHPHVVRLLGICLS---S 81 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---C
Confidence 34788999999999999999776654 58888776442 24455778899999999999999999998865 4
Q ss_pred eEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
..++++|++++++|.+++... ..+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+ +.++|+|||+++.
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~kL~dfg~~~~ 158 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR--LVHRDLAARNVLVKTP-QHVKITDFGLAKL 158 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--EEecccCcceEEEcCC-CeEEECCCccccc
Confidence 578899999999999988653 46899999999999999999999999 9999999999999855 5899999999987
Q ss_pred ccccceee--------eecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ ..+.+| +......++.++|+||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~P-E~~~~~~~~~~~Di~slG 198 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMAL-ESILHRIYTHKSDVWSYG 198 (279)
T ss_pred ccCcccceecCCCcccccccCH-HHhhcCCcCchhhHHHHH
Confidence 65433211 112233 233445567789999999
No 242
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=3.1e-28 Score=193.10 Aligned_cols=180 Identities=22% Similarity=0.355 Sum_probs=147.1
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
+-+++.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+.+|+++++.++|||++++++.+... +.++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEE
Confidence 33477789999999999999999999999999887543 344457889999999999999999999999654 5688
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++|||+++++|.+++...+.+++..+..++.+++.++.|||+ .+ ++|+||+|+|++++.+ +.++|+|||++.....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~--i~H~dl~p~nil~~~~-~~~~l~d~gl~~~~~~ 156 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR--IMHRDIKPSNILVNSR-GQIKLCDFGVSGELIN 156 (284)
T ss_pred EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC--eeccCCCHHHEEECCC-CcEEEccCCcccchhh
Confidence 999999999999988877789999999999999999999996 57 9999999999999855 6899999999876533
Q ss_pred cce----eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+.+|+ ......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~aPE-~~~~~~~~~~~Di~slG 189 (284)
T cd06620 157 SIADTFVGTSTYMSPE-RIQGGKYTVKSDVWSLG 189 (284)
T ss_pred hccCccccCcccCCHH-HHccCCCCccchHHHHH
Confidence 221 122223333 33445677789999999
No 243
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=6.6e-28 Score=190.16 Aligned_cols=177 Identities=20% Similarity=0.293 Sum_probs=140.7
Q ss_pred eeeeeeccccceEEEEEEecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 28 RYNELLGSGAVKKVYRAFDQE-----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
++.+.||+|+||.||+|.... +...+++|.+.... .....+.+.+|+.++++++|+|++++++.+. +...
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~ 82 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---DENLQSEFRRELDMFRKLSHKNVVRLLGLCR--EAEP 82 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---chHHHHHHHHHHHHHHhcCCcceeeeEEEEC--CCCc
Confidence 677899999999999998643 34678888765432 2335578999999999999999999999884 4456
Q ss_pred EEEEeccccCCChHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 103 LNFITEVCTSGNLREYRKKHR---------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~---------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
.+++||++++++|.+++.... .+++..+..++.|++.++.|||+++ ++|+||||+|++++.+ +.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dlkp~Nili~~~-~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR--FVHRDLAARNCLVSSQ-REVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC--cccCcCccceEEEeCC-CcEEEc
Confidence 788999999999999987654 6899999999999999999999999 9999999999999865 589999
Q ss_pred ccccceeccccce-------eeeecccCccccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|||++........ ....+.+| ++........++|+||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~P-E~~~~~~~~~~~Di~slG 205 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAP-EAVQEDDFSTKSDVWSFG 205 (275)
T ss_pred ccccccccCcccccccCCceeEEeecCh-hhhccCCCCchhhHHHHH
Confidence 9999875432211 11223333 344445566789999999
No 244
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=8.4e-28 Score=192.41 Aligned_cols=183 Identities=26% Similarity=0.421 Sum_probs=142.9
Q ss_pred CCCceeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEE
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVW 95 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~ 95 (219)
...+.+.+.+.||+|+||.||+|.. ..++..+|+|.++... .....+.+.+|+.+++++ +|+||+++++.+
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA---HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC---ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3344458889999999999999975 3455689999876432 234457789999999999 799999999988
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
... +.++++|||+++++|.+++.... .+++..+..++.|++.++.|||+++ ++|+||+|+||+++.+ +.++++
T Consensus 109 ~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~-~~~~l~ 183 (302)
T cd05055 109 TIG--GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNVLLTHG-KIVKIC 183 (302)
T ss_pred ecC--CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eehhhhccceEEEcCC-CeEEEC
Confidence 554 45788999999999999886543 3889999999999999999999999 9999999999999855 589999
Q ss_pred ccccceeccccceee--------eecccCccccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIRRI--------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|||++.......... ..+.+| +......++.++|+||+|
T Consensus 184 dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~DiwslG 230 (302)
T cd05055 184 DFGLARDIMNDSNYVVKGNARLPVKWMAP-ESIFNCVYTFESDVWSYG 230 (302)
T ss_pred CCcccccccCCCceeecCCCCcccccCCH-hhhccCCCCcHhHHHHHH
Confidence 999998665432110 112222 333344467789999999
No 245
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=4.2e-28 Score=191.75 Aligned_cols=180 Identities=21% Similarity=0.279 Sum_probs=142.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 105 (219)
|++.+.||+|+||.||+|.+..++..+|+|.++.... +... .....|+..++++. |+|++++++++.......+++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK--SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC--Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEE
Confidence 3677899999999999999999999999998875432 1222 23457888888885 999999999987654467899
Q ss_pred EeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
++||++ +++.+.+.. ...+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++. +.++|+|||++......
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 78 VFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG--IFHRDIKPENILIKD--DILKLADFGSCRGIYSK 152 (282)
T ss_pred EEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEcC--CCeEEEecccccccccC
Confidence 999997 577776654 356899999999999999999999999 999999999999986 68999999999876443
Q ss_pred ce-----eeeecccCccccCCCccccccceeeecc
Q 027788 185 IR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.. .+..+.+|+.+.....++.++|+||+|+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv 187 (282)
T cd07831 153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGC 187 (282)
T ss_pred CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHH
Confidence 32 2223444544444555677899999993
No 246
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=4.8e-28 Score=190.01 Aligned_cols=175 Identities=18% Similarity=0.278 Sum_probs=136.1
Q ss_pred eeeccccceEEEEEEecC------------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 31 ELLGSGAVKKVYRAFDQE------------EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~------------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
+.||+|+||.||+|.... ....+++|.+... .......+..|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS----HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 368999999999997421 2235888876543 233446788899999999999999999998644
Q ss_pred CCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC------cEE
Q 027788 99 DRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG------QVK 171 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~------~~~ 171 (219)
...+++|||+++++|..++.. ...+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.+.. .++
T Consensus 77 --~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 77 --VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred --CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC--eECCCCCcccEEEecCCccCCCCceeE
Confidence 446789999999999888764 356899999999999999999999999 999999999999974421 279
Q ss_pred Eeccccceeccccce--eeeecccCccccCCCccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIR--RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++|||++........ .+..+.+|+.+.....++.++|+||+|
T Consensus 153 l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 196 (262)
T cd05077 153 LSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFG 196 (262)
T ss_pred eCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHH
Confidence 999999876644322 233455565454456677889999999
No 247
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=1.6e-27 Score=185.95 Aligned_cols=179 Identities=19% Similarity=0.395 Sum_probs=146.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.+|.+.+..+++.+++|.+..... .....+.+.+|+.++++++|||++++.+.+ +..+..+++
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--~~~~~~~lv 77 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREESRKEVAVLSNMKHPNIVQYQESF--EENGNLYIV 77 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHHHHHHHHHHhCCCCCeeeeEeee--cCCCeEEEE
Confidence 3677999999999999999999999999999875433 234456788999999999999999999988 445678899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+|++++++|.+++... ..+++..+..++.|++.++.+||+++ ++|+||+|+||+++.+ +.++++|||++......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~l~~~nil~~~~-~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKD-GTIKLGDFGIARVLNST 154 (256)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEEeeccceeecCcc
Confidence 9999999999887653 25788999999999999999999999 9999999999999865 58999999999876543
Q ss_pred ce------eeeecccCccccCCCccccccceeeec
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. +...+. +++...+...+.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~-~pe~~~~~~~~~~~Dv~slG 188 (256)
T cd08218 155 VELARTCIGTPYYL-SPEICENRPYNNKSDIWALG 188 (256)
T ss_pred hhhhhhccCCcccc-CHHHhCCCCCCCccchhHHH
Confidence 22 111222 23444455667789999999
No 248
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1e-27 Score=187.79 Aligned_cols=179 Identities=25% Similarity=0.474 Sum_probs=147.4
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|....++..+++|.++.... .....+.+..|+.+++.++|+||+++++.+. +.+.++++
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--~~~~~~lv 77 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN--DPKTIKEIADEMKVLELLKHPNLVKYYGVEV--HREKVYIF 77 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc--chHHHHHHHHHHHHHHhCCCCChhheeeeEe--cCCEEEEE
Confidence 3778999999999999999988999999999876543 2456788999999999999999999999874 45668899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+||+++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~~~nil~~~~-~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG--IVHRDIKPANIFLDHN-GVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEcccccccccCCCCC
Confidence 999999999999887767889999999999999999999999 9999999999999865 6899999999987754332
Q ss_pred e----------eeecccCccccCCC---ccccccceeeec
Q 027788 187 R----------IRCWGRRSSWRRSC---TMRITRSLWTYT 213 (219)
Q Consensus 187 ~----------~~~~~~~~~~~~~~---~~~~~~diws~g 213 (219)
. ...+..| ++.... .+..++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~P-E~~~~~~~~~~~~~~Dv~s~G 193 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAP-EVITGGKGKGHGRAADIWSLG 193 (264)
T ss_pred cccccccCCcCCcCccCh-hhccCCCCCCCCcccchHHHH
Confidence 1 1112222 333222 267789999999
No 249
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=7.5e-28 Score=188.03 Aligned_cols=175 Identities=22% Similarity=0.355 Sum_probs=139.9
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
-+++.+.||+|+||.||++.. .+..+++|.++.. ...+.+.+|+.++++++|+|++++++.+... .+..++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~l 77 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYI 77 (256)
T ss_pred hCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceEE
Confidence 347889999999999999965 4778999987632 2246788999999999999999999876433 355788
Q ss_pred EeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 106 ITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++||+++++|.+++.... .+++..+..++.|++.++.+||+++ ++|+||+|+||+++.+ +.++++|||++.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nil~~~~-~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN--FVHRDLAARNVLVSED-NVAKVSDFGLTKEASS 154 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeccccchheEEEcCC-CcEEecCCccceeccc
Confidence 999999999999886543 4788999999999999999999999 9999999999999865 5899999999886544
Q ss_pred cce---eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ....+.+| +......++.++|+||+|
T Consensus 155 ~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 186 (256)
T cd05082 155 TQDTGKLPVKWTAP-EALREKKFSTKSDVWSFG 186 (256)
T ss_pred cCCCCccceeecCH-HHHccCCCCchhhhHHHH
Confidence 321 11123333 444556677889999999
No 250
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=6.1e-28 Score=190.09 Aligned_cols=174 Identities=24% Similarity=0.408 Sum_probs=135.5
Q ss_pred eeeccccceEEEEEEecCCCc--EEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEGI--EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|+||.||+|....++. .+++|.++... .....+.+..|+++++++ +|||++++++.+... ..++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC---CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEE
Confidence 368999999999999887775 45777766322 344557788999999999 799999999998544 4578899
Q ss_pred ccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 108 EVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
|++++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||||+|++++.+ +.++
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nili~~~-~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGEN-YVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccccceEEEcCC-CeEE
Confidence 9999999999876432 3678899999999999999999999 9999999999999865 5899
Q ss_pred Eeccccceeccccceee----e-ecccCccccCCCccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIRRI----R-CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++|||++.......... . .+.+| +......++.++|+||||
T Consensus 153 l~dfgl~~~~~~~~~~~~~~~~~~y~ap-E~~~~~~~~~~~Di~slG 198 (270)
T cd05047 153 IADFGLSRGQEVYVKKTMGRLPVRWMAI-ESLNYSVYTTNSDVWSYG 198 (270)
T ss_pred ECCCCCccccchhhhccCCCCccccCCh-HHHccCCCCchhhHHHHH
Confidence 99999986433221111 1 12233 344455677789999999
No 251
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=8.6e-28 Score=190.14 Aligned_cols=176 Identities=19% Similarity=0.320 Sum_probs=135.6
Q ss_pred eeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHH---HHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 32 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVR---LLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~---~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
.||+|+||.||+|.+..+++.||+|.+......... ....+..|.. .++...||+++++.+.+.. .+.++++||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ-GETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccch-hHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEe
Confidence 479999999999999999999999998754332111 1122333433 3444578999999988854 456888999
Q ss_pred cccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--
Q 027788 109 VCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-- 186 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-- 186 (219)
|+++++|..++.....+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 78 ~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~nili~~~-~~~kl~dfg~~~~~~~~~~~~ 154 (278)
T cd05606 78 LMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEH-GHVRISDLGLACDFSKKKPHA 154 (278)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCCCCHHHEEECCC-CCEEEccCcCccccCccCCcC
Confidence 9999999998877778999999999999999999999999 9999999999999866 5899999999876543322
Q ss_pred --eeeecccCccccCCCccccccceeeec
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+|+.......++.++|+||+|
T Consensus 155 ~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 155 SVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred cCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 222233344333344577789999999
No 252
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=4.3e-28 Score=196.95 Aligned_cols=184 Identities=23% Similarity=0.355 Sum_probs=146.9
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC---
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR--- 100 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~--- 100 (219)
.+| ++.+.||+|+||.||+|.+..++..||+|.++.... ......++.+|+.+++.++|+|++++++++.....
T Consensus 5 ~~y-~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 5 TKY-VPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD--NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred cce-eEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 445 777899999999999999999999999999875432 22334667789999999999999999887754321
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
..+++++||+. ++|.+++.....+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~~~ 157 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN--VLHRDLKPSNLLLNAN-CDLKICDFGLART 157 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCC-CCEEECcCccccc
Confidence 35789999996 688888877778999999999999999999999999 9999999999999865 5899999999987
Q ss_pred ccccce------eeeecccCccccCCCccccccceeeecc
Q 027788 181 VGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 181 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
...... .+..+.+|+.......++.++|+||+|+
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 197 (337)
T cd07858 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGC 197 (337)
T ss_pred cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHH
Confidence 654321 2222334443444345778899999993
No 253
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=3.9e-28 Score=192.54 Aligned_cols=180 Identities=22% Similarity=0.337 Sum_probs=145.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|.+..++..|++|.++.... .....+.+.+|++++++++|+|++++.+.+.. .+.++++
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 78 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED--DEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLV 78 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc--cccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEE
Confidence 4788999999999999999999999999998875432 23345778899999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||++++.+..+......++...+..++.|++.++.+||..+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~~~ni~~~~~-~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN--IIHRDIKPENILVSES-GVLKLCDFGFARALRARPA 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEEeeecccccCCCcc
Confidence 999998777766665567899999999999999999999999 9999999999999865 6899999999887655432
Q ss_pred -------eeeecccCccccCCCccccccceeeec
Q 027788 187 -------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+..|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG 189 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIG 189 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHH
Confidence 111122333223333677789999999
No 254
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=3.6e-28 Score=195.19 Aligned_cols=183 Identities=25% Similarity=0.396 Sum_probs=144.6
Q ss_pred eeeeeeeccccceEEEEEEecC--CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE--EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
|++.+.||+|++|.||+|.+.. ++..||+|.+..... ......+.+.+|+.+++.++|||++++++.+...+...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677899999999999999988 899999999886431 1233346677899999999999999999999777567899
Q ss_pred EEeccccCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC---CCCcEEEeccc
Q 027788 105 FITEVCTSGNLREYRKKH-----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG---NTGQVKIGDLG 176 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~---~~~~~~l~dfg 176 (219)
++||++++ ++.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++. ..+.++++|||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW--VLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 99999974 666655422 25789999999999999999999999 999999999999986 13589999999
Q ss_pred cceeccccce---------eeeecccCccccCCCccccccceeeec
Q 027788 177 VAAIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 177 ~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++........ .+..+.+|+.+.....++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 203 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG 203 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence 9987644322 112234444444445677789999999
No 255
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=7e-28 Score=188.02 Aligned_cols=174 Identities=26% Similarity=0.401 Sum_probs=143.7
Q ss_pred eeeccccceEEEEEEecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEE---GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|+||.||+|..... +..+++|.++.... ....+.+.+|+..++.++|+|++++++++.. ...++++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS---EEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc---hhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEE
Confidence 4689999999999998866 89999999875432 2246788999999999999999999998854 56688999
Q ss_pred ccccCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 108 EVCTSGNLREYRKKH---------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 108 e~~~~g~L~~~~~~~---------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
||+++++|.+++... ..+++..+..++.|++.|+.+||+++ ++|+||+|+||+++.+ +.++|+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~nili~~~-~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK--FVHRDLAARNCLVGED-LVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC--cccCccCcceEEECCC-CcEEEcccccc
Confidence 999999999998764 67899999999999999999999999 9999999999999866 68999999999
Q ss_pred eeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ .+..+.+|+ ......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG 194 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPE-SLKDGIFTSKSDVWSFG 194 (262)
T ss_pred cccccccccccccCCCcCccccCHH-HhccCCcchhhccHHHH
Confidence 87765421 112233333 33344677789999999
No 256
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=1.6e-27 Score=189.06 Aligned_cols=184 Identities=22% Similarity=0.400 Sum_probs=143.9
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEec--
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRD-- 97 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-- 97 (219)
++..+| .+.+.||+|+||.||+|.+..+++.+|+|.+.... .....+.+|+.+++.+ +|+|++++++++..
T Consensus 15 ~~~~~~-~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 15 DPSDTW-EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred Ccccce-eeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 455677 67799999999999999999999999999876321 1125577899999999 69999999988743
Q ss_pred -CCCceEEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEE
Q 027788 98 -EDRNTLNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKI 172 (219)
Q Consensus 98 -~~~~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l 172 (219)
++.+.++++|||+++++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.+++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~nili~~~-~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK--TIHRDVKGNNILLTTE-GGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC--ccccCCCHHhEEECCC-CCEEE
Confidence 344678999999999999987642 346888999999999999999999999 9999999999999866 57999
Q ss_pred eccccceeccccce------eeeecccCcccc----CCCccccccceeeec
Q 027788 173 GDLGVAAIVGRAIR------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 173 ~dfg~a~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
+|||++........ ++..+.+|+... ....++.++|+||+|
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 216 (286)
T cd06638 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLG 216 (286)
T ss_pred ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHH
Confidence 99999987644221 112233333221 123467789999999
No 257
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=7.4e-28 Score=191.43 Aligned_cols=182 Identities=20% Similarity=0.298 Sum_probs=144.5
Q ss_pred eeeeeeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 102 (219)
|++.+.||+|+||.||.|.+. .+|..||+|.++...........+++.+|+.+++.+ +|+||+++++.+. ....
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~--~~~~ 79 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ--TDTK 79 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee--cCCe
Confidence 367799999999999999864 478999999987543333344457788999999999 5899999988884 4456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++++|++++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~kl~dfg~~~~~~ 156 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG--IIYRDIKLENILLDSN-GHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeEECCC-CCEEEeeCccceecc
Confidence 8899999999999999887778899999999999999999999999 9999999999999865 689999999998764
Q ss_pred ccce-------eeeecccCccccCC-Cccccccceeeec
Q 027788 183 RAIR-------RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~-------~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
.... +...+.+|+..... ..++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (290)
T cd05613 157 EDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMG 195 (290)
T ss_pred cccccccccccCCcccCChhhccCCCCCCCccccHHHHH
Confidence 4321 11223334333322 2355679999999
No 258
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.96 E-value=8.8e-28 Score=190.01 Aligned_cols=183 Identities=21% Similarity=0.269 Sum_probs=144.4
Q ss_pred CCceeeeeeeeccccceEEEEEEecC----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQE----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
....+.+.+.||+|+||.||+|.+.. .+..|++|.+.... .....+.+.+|+.++++++|+|++++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 34455888999999999999999765 35789999876332 455668889999999999999999999887543
Q ss_pred CCceEEEEeccccCCChHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcE
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKH--------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQV 170 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~--------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~ 170 (219)
....+++++++++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+|++++.+ +.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--i~H~di~p~nil~~~~-~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG--VIHKDIAARNCVIDEE-LQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCHhhEEEcCC-CcE
Confidence 35567899999999999987653 34789999999999999999999999 9999999999999865 589
Q ss_pred EEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 171 KIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 171 ~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+++|||+++.+...... ...+.+|+ ......++.++||||+|
T Consensus 157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE-~~~~~~~~~~~Di~slG 206 (280)
T cd05043 157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALE-SLVNKEYSSASDVWSFG 206 (280)
T ss_pred EECCCCCcccccCCceEEeCCCCCcchhccCHH-HHhcCCCCchhhHHHhH
Confidence 99999999866433211 11123333 33445567789999999
No 259
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=4.6e-28 Score=190.57 Aligned_cols=175 Identities=20% Similarity=0.282 Sum_probs=131.8
Q ss_pred eeeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
+.||+|+||.||+|... .....+++|.+.... .......+.+|+.+++.++|+||+++++.+.. ...++++||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC---ChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceEEEEE
Confidence 36899999999999643 234567888765332 23344667889999999999999999998854 455888999
Q ss_pred cccCCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 109 VCTSGNLREYRKKHR-----HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~-----~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|+++++|.+++.... ..++.....++.|++.|+.|||+.+ ++||||||+|++++.+ +.++++|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD--FIHSDLALRNCQLTAD-LSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC--EecccccHhheEecCC-CcEEEecccccccccc
Confidence 999999999886542 2457778899999999999999999 9999999999999865 5899999999876433
Q ss_pred cce--------eeeecccCcccc------CCCccccccceeeec
Q 027788 184 AIR--------RIRCWGRRSSWR------RSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~--------~~~~~~~~~~~~------~~~~~~~~~diws~g 213 (219)
... ....+.+|+.+. ....++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 211 011123333221 123456689999999
No 260
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=8.3e-28 Score=192.54 Aligned_cols=188 Identities=19% Similarity=0.371 Sum_probs=145.1
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
..+..++| .+.+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.++++++|||++++++++...
T Consensus 7 ~~~~~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 7 FCDEVSKY-EKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred ccchhhhe-EEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC--cCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 34455666 677999999999999999999999999998865432 122224556799999999999999999988654
Q ss_pred C------CceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 99 D------RNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 99 ~------~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
+ ....+++|||++ ++|.+.+... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~k 159 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK--ILHRDMKAANILITKD-GILK 159 (310)
T ss_pred cccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEECCC-CcEE
Confidence 3 235688999996 5777766543 36899999999999999999999999 9999999999999855 6899
Q ss_pred Eeccccceecccccee----------eeecccCccccCCCccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIRR----------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+|||++......... ...+.+|+.......++.++|+||+|
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 211 (310)
T cd07865 160 LADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG 211 (310)
T ss_pred ECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence 9999999766433211 11233344333344466789999999
No 261
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=2.1e-27 Score=188.89 Aligned_cols=185 Identities=23% Similarity=0.383 Sum_probs=145.4
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDE 98 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~ 98 (219)
+++.++| .+.+.||+|+||.||++....+++.+|+|.+.... .....+.+|+.+++++ +|||++++++++...
T Consensus 18 ~~~~~~y-~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 18 GDPTDTW-EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred CCCCCCe-EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3456667 77789999999999999999999999999876431 1235567899999988 899999999988643
Q ss_pred C---CceEEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 99 D---RNTLNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 99 ~---~~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
+ ...+++++||+++++|.+++.. ...+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~dlkp~nili~~~-~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR--IIHRDVKGNNILLTTE-GGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEE
Confidence 3 2467899999999999987652 346889999999999999999999999 9999999999999865 5899
Q ss_pred Eeccccceeccccce------eeeecccCccccCCC----ccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIR------RIRCWGRRSSWRRSC----TMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~diws~g 213 (219)
|+|||++........ ++..+.+|+...... .++.++|+||+|
T Consensus 169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG 220 (291)
T cd06639 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLG 220 (291)
T ss_pred EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHH
Confidence 999999886543221 222344444332222 256789999999
No 262
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.6e-30 Score=221.44 Aligned_cols=182 Identities=17% Similarity=0.252 Sum_probs=155.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|+||.|...+.+.+++.||+|++++......+ ....|+.|..++..-+.+=|+.++..|+ +.+++|+||
T Consensus 78 eilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~-~tA~F~EERDimv~~ns~Wiv~LhyAFQ--D~~~LYlVM 154 (1317)
T KOG0612|consen 78 EILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRA-ETACFREERDIMVFGNSEWIVQLHYAFQ--DERYLYLVM 154 (1317)
T ss_pred HHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhch-hHHHHHHHhHHHHcCCcHHHHHHHHHhc--CccceEEEE
Confidence 6778999999999999999999999999999863322122 2366889999999888888899988885 456799999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc--
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI-- 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~-- 185 (219)
||++||+|-.++++...+++.-+++++..|+.||.-+|+.| ++||||||+|+|++.. |.++|+|||.|..+..+.
T Consensus 155 dY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg--yVHRDiKPDNvLld~~-GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 155 DYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG--YVHRDIKPDNVLLDKS-GHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred ecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc--ceeccCCcceeEeccc-CcEeeccchhHHhcCCCCcE
Confidence 99999999999998888999999999999999999999999 9999999999999966 799999999998887554
Q ss_pred eeeeecccCcccc--------C-CCccccccceeeeccc
Q 027788 186 RRIRCWGRRSSWR--------R-SCTMRITRSLWTYTRL 215 (219)
Q Consensus 186 ~~~~~~~~~~~~~--------~-~~~~~~~~diws~gi~ 215 (219)
.+..++|+|.... . ...|...+|-||+||+
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~ 270 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF 270 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHH
Confidence 3667788876432 1 3678888999999943
No 263
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=8.5e-28 Score=188.27 Aligned_cols=174 Identities=21% Similarity=0.322 Sum_probs=143.4
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||.|++|.||+|++..++..+++|.+...... .....+.+.+|+.+++.++|||++++++.+. +...+++++||+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~ 77 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ETGQQEHIFSEKEILEECNHPFIVKLYRTFK--DKKYIYMLMEYCLG 77 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE--cCCccEEEEecCCC
Confidence 68999999999999999999999998754322 2334577899999999999999999999884 44568889999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-----e
Q 027788 113 GNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-----R 187 (219)
Q Consensus 113 g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-----~ 187 (219)
++|.+++.....++...+..++.|++.++.+||+++ ++|+||+|+||+++.+ +.++|+|||++........ +
T Consensus 78 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--~~h~dl~~~nilv~~~-~~~~l~df~~~~~~~~~~~~~~~~~ 154 (262)
T cd05572 78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG--IIYRDLKPENLLLDSN-GYVKLVDFGFAKKLKSGQKTWTFCG 154 (262)
T ss_pred CcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEEcCC-CCEEEeeCCcccccCcccccccccC
Confidence 999999887777899999999999999999999999 9999999999999865 6899999999987755321 1
Q ss_pred eeecccCccccCCCccccccceeeec
Q 027788 188 IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...+..| +......++.++|+||+|
T Consensus 155 ~~~~~~P-E~~~~~~~~~~~Di~slG 179 (262)
T cd05572 155 TPEYVAP-EIILNKGYDFSVDYWSLG 179 (262)
T ss_pred CcCccCh-hHhcCCCCCChhhhhhhH
Confidence 1222233 334455677789999999
No 264
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=9.8e-28 Score=192.36 Aligned_cols=180 Identities=28% Similarity=0.405 Sum_probs=140.8
Q ss_pred CceeeeeeeeccccceEEEEEEecC-------CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQE-------EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVW 95 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~ 95 (219)
++| .+.+.||+|+||.||.|.+.. +...+|+|.++... .......+..|+++++++ +|+|++++++++
T Consensus 18 ~~~-~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 18 DRL-VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred HHe-EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 444 888999999999999997643 23569999887432 233446788899999999 799999999998
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCS 159 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ 159 (219)
... +.++++|||+++++|.+++.... .++...+..++.|++.++.|||+.+ ++|+||||+
T Consensus 94 ~~~--~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g--i~H~dlkp~ 169 (307)
T cd05098 94 TQD--GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK--CIHRDLAAR 169 (307)
T ss_pred ecC--CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC--cccccccHH
Confidence 544 45788999999999999986532 3778889999999999999999999 999999999
Q ss_pred ceEEeCCCCcEEEeccccceeccccce--ee------eecccCccccCCCccccccceeeec
Q 027788 160 NVFVNGNTGQVKIGDLGVAAIVGRAIR--RI------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 160 nili~~~~~~~~l~dfg~a~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
||+++.+ +.++|+|||++........ .. ..+.+| +......++.++|+||+|
T Consensus 170 Nill~~~-~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~DvwslG 229 (307)
T cd05098 170 NVLVTED-NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP-EALFDRIYTHQSDVWSFG 229 (307)
T ss_pred heEEcCC-CcEEECCCcccccccccchhhccccCCCccceeCh-HHhccCCCCcHHHHHHHH
Confidence 9999866 5899999999976643221 00 112223 334445677789999999
No 265
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=4.1e-28 Score=196.82 Aligned_cols=188 Identities=24% Similarity=0.393 Sum_probs=147.6
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH----------HHHHHHHHHHHHHHhhCCCCce
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP----------AMIERLFSEVRLLKTLANKNII 89 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~----------~~~~~~~~E~~~l~~l~~~~i~ 89 (219)
.+...+|..+.+.||+|+||.||+|.+..+++.||+|.+......... .....+.+|+++++.++|+|++
T Consensus 4 ~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 83 (335)
T PTZ00024 4 FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIM 83 (335)
T ss_pred cccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCccee
Confidence 356688888888999999999999999999999999998754321100 0112467899999999999999
Q ss_pred EEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCc
Q 027788 90 SLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQ 169 (219)
Q Consensus 90 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~ 169 (219)
++++++. ..+.++++||+++ ++|.+++.....+++.....++.|++.++.+||+.+ ++|+||+|+||+++.+ +.
T Consensus 84 ~~~~~~~--~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~--i~H~dl~~~nill~~~-~~ 157 (335)
T PTZ00024 84 GLVDVYV--EGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY--FMHRDLSPANIFINSK-GI 157 (335)
T ss_pred eeeEEEe--cCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHeEECCC-CC
Confidence 9999985 4457889999996 689888877778999999999999999999999999 9999999999999865 58
Q ss_pred EEEeccccceeccccc--------------e------eeeecccCccccCCCccccccceeeec
Q 027788 170 VKIGDLGVAAIVGRAI--------------R------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 170 ~~l~dfg~a~~~~~~~--------------~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++++|||++....... . .+..+..|+.......++.++|+||+|
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 221 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVG 221 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHH
Confidence 9999999998765111 0 111122333333333467789999999
No 266
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-30 Score=194.10 Aligned_cols=184 Identities=23% Similarity=0.354 Sum_probs=152.1
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
...| .+-+.||+|.|+.|+++.+..+|+.+|+|+++...+.. ...+.+.+|+.+-+.|+||||+++.+.... ..+
T Consensus 10 ~d~y-~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~--~~~e~l~rEarIC~~LqHP~IvrL~~ti~~--~~~ 84 (355)
T KOG0033|consen 10 SDNY-DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQKLEREARICRKLQHPNIVRLHDSIQE--ESF 84 (355)
T ss_pred chhh-hHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc--ccHHHHHHHHHHHHhcCCCcEeehhhhhcc--cce
Confidence 3444 67789999999999999999999999999998877643 355888999999999999999999999854 456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcEEEecccccee
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQVKIGDLGVAAI 180 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~~l~dfg~a~~ 180 (219)
.|+|.|.+.|++|..-+-...-+++..+...+.|++.++.|+|.++ |+|||+||.|+++.+.. .-+|++|||+|..
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~--IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG--IVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ceeccCChhheeeeeccCCCceeecccceEEE
Confidence 7889999999999865433356888889999999999999999999 99999999999986332 3589999999999
Q ss_pred ccccceeeeecccCc----cccCCCccccccceeeec
Q 027788 181 VGRAIRRIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
+.....-....|+|. +..+..+|+-+.||||-|
T Consensus 163 l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cG 199 (355)
T KOG0033|consen 163 VNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 199 (355)
T ss_pred eCCccccccccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence 985554444455554 345677788889999999
No 267
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=6.2e-28 Score=190.74 Aligned_cols=174 Identities=19% Similarity=0.300 Sum_probs=139.6
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|+||.||+|.+..+++.+++|.+...... .......+..|+++++.++|||++++.+.+. ..+.++++|||+++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~e~~~~ 77 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-KRKGEQMALNEKKILEKVSSRFIVSLAYAFE--TKDDLCLVMTLMNG 77 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe--cCCeEEEEEecCCC
Confidence 68999999999999999999999998754322 2223456678999999999999999998884 34568899999999
Q ss_pred CChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 113 GNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 113 g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++|.+++.... .+++..+..++.|++.++.|||..+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~di~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~ 154 (277)
T cd05577 78 GDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR--IVYRDLKPENVLLDDH-GNVRISDLGLAVELKGGKKIKGR 154 (277)
T ss_pred CcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEccCcchhhhccCCccccc
Confidence 99998886554 6899999999999999999999999 9999999999999865 5899999999876543221
Q ss_pred -eeeecccCccccCCCccccccceeeec
Q 027788 187 -RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+.. ++......++.++|+||+|
T Consensus 155 ~~~~~y~~-PE~~~~~~~~~~~Di~slG 181 (277)
T cd05577 155 AGTPGYMA-PEVLQGEVYDFSVDWFALG 181 (277)
T ss_pred cCCCCcCC-HHHhcCCCCCchhhhHHHH
Confidence 1112222 3334445577789999999
No 268
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=5.4e-28 Score=190.85 Aligned_cols=178 Identities=27% Similarity=0.389 Sum_probs=145.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC---CCCceEEEEEEecCCCceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA---NKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~~ 103 (219)
|.+.+.||+|+||.||+|.+..++..+++|.++... .....+.+.+|+.+++.++ |||++++++.+. +....
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~--~~~~~ 77 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT---PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL--KGPRL 77 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC---CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee--eCCEE
Confidence 466688999999999999999999999999987543 2344567888999999996 999999999884 34568
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||+++++|.++++.. .+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++.....
T Consensus 78 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVG--VIHRDIKAANILVTNT-GNVKLCDFGVAALLNQ 153 (277)
T ss_pred EEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcCHHHEEEcCC-CCEEEccCCceeecCC
Confidence 8999999999999987654 7889999999999999999999999 9999999999999865 6899999999987755
Q ss_pred cce------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+.+|+.......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 189 (277)
T cd06917 154 NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLG 189 (277)
T ss_pred CccccccccCCcceeCHHHhccCCccccchhHHHHH
Confidence 432 111233444444444567789999999
No 269
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.6e-27 Score=189.34 Aligned_cols=179 Identities=25% Similarity=0.421 Sum_probs=146.0
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+.||.|++|.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..+....++++|
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP---NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC---chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 56689999999999999999999999999987542 234457788999999999999999999998777767789999
Q ss_pred ccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 108 EVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 108 e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
||+++++|.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~--i~H~dl~~~nil~~~~-~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK--IIHRDIKPSNILLTRK-GQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEecC-CeEEEeeccccccccc
Confidence 99999999887542 345889999999999999999999999 9999999999999865 5899999999876543
Q ss_pred cce----eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ....+.+| +......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~y~~p-E~~~~~~~~~~~Dv~slG 190 (287)
T cd06621 158 SLAGTFTGTSFYMAP-ERIQGKPYSITSDVWSLG 190 (287)
T ss_pred cccccccCCccccCH-HHhcCCCCCchhhHHHHH
Confidence 221 12222233 334455677789999999
No 270
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.96 E-value=2.4e-28 Score=191.19 Aligned_cols=176 Identities=24% Similarity=0.381 Sum_probs=142.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||.|+||.||+|.+.. +..+++|.+.... ......+..|+.+++.++|+|++++++++.. ...++++
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 80 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD----LLKQQDFQKEVQALKRLRHKHLISLFAVCSV--GEPVYII 80 (261)
T ss_pred HHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc----hhhHHHHHHHHHHHhcCCCcchhheeeeEec--CCCeEEE
Confidence 3677999999999999999877 8899999987542 3335678899999999999999999998854 4557889
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++... ..++...+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~h~dl~~~nilv~~~-~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN--SIHRDLAARNILVGED-LVCKVADFGLARLIKED 157 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccccCcceEEEcCC-ceEEEccccchhhcCCc
Confidence 9999999999998753 35789999999999999999999999 9999999999999865 58999999999876543
Q ss_pred ceeee------ecccCccccCCCccccccceeeec
Q 027788 185 IRRIR------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~~~------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..... .+.. ++......++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~-PE~~~~~~~~~~~DiwslG 191 (261)
T cd05148 158 VYLSSDKKIPYKWTA-PEAASHGTFSTKSDVWSFG 191 (261)
T ss_pred cccccCCCCceEecC-HHHHccCCCCchhhHHHHH
Confidence 22111 1222 3333445677789999999
No 271
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96 E-value=6e-28 Score=189.38 Aligned_cols=176 Identities=22% Similarity=0.371 Sum_probs=139.3
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
++ |++.++||+|+||.||+|.+..+ ..||+|.++.... ..+.+.+|+.+++.++|+|++++++.+.. ...
T Consensus 6 ~~-~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~ 75 (262)
T cd05071 6 ES-LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI 75 (262)
T ss_pred HH-eeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-----CHHHHHHHHHHHHhCCCCCcceEEEEECC---CCc
Confidence 44 48999999999999999987655 4699998874321 22568889999999999999999887632 336
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++||++++++|.+++... ..+++..+..++.|++.++.++|+.+ ++|+||+|+||+++.+ +.++|+|||.+...
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~Nill~~~-~~~~L~dfg~~~~~ 152 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGEN-LVCKVADFGLARLI 152 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccCcccEEEcCC-CcEEeccCCceeec
Confidence 7899999999999988753 35789999999999999999999999 9999999999999855 58999999999876
Q ss_pred cccceee-------eecccCccccCCCccccccceeeec
Q 027788 182 GRAIRRI-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... ..+.+ ++......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DvwslG 190 (262)
T cd05071 153 EDNEYTARQGAKFPIKWTA-PEAALYGRFTIKSDVWSFG 190 (262)
T ss_pred cccccccccCCcccceecC-HhHhccCCCCchhhHHHHH
Confidence 4433110 11222 3344455577789999999
No 272
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.5e-27 Score=186.69 Aligned_cols=178 Identities=22% Similarity=0.413 Sum_probs=149.2
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|++|.||+|.+..+++.+++|.+..... ....+.+.+|+..+++++|+|++++++.+.. .+.++++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 77 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD---EEFRKQLLRELKTLRSCESPYVVKCYGAFYK--EGEISIV 77 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc---hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc--CCeEEEE
Confidence 3677999999999999999999999999999875532 2455788999999999999999999999854 4668889
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+||+++++|.+++.....+++..+..++.|++.++.+||+ .+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~--~~H~~l~~~ni~~~~~-~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH--IIHRDIKPSNLLINSK-GEVKIADFGISKVLENTL 154 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC--CccCCCCHHHEEECCC-CCEEEccCccceecccCC
Confidence 9999999999998877789999999999999999999999 99 9999999999999866 589999999998775433
Q ss_pred ee------eeecccCccccCCCccccccceeeec
Q 027788 186 RR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. ...+.+| +......++.++|+||||
T Consensus 155 ~~~~~~~~~~~y~~p-E~~~~~~~~~~~Dv~slG 187 (264)
T cd06623 155 DQCNTFVGTVTYMSP-ERIQGESYSYAADIWSLG 187 (264)
T ss_pred CcccceeecccccCH-hhhCCCCCCchhhHHHHH
Confidence 22 1222333 344455677789999999
No 273
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=5.8e-28 Score=196.06 Aligned_cols=183 Identities=26% Similarity=0.419 Sum_probs=144.4
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED--- 99 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 99 (219)
.++| .+.+.||+|+||.||+|.+..++..||+|.+.... .......+..|+.++++++|+|++++++++....
T Consensus 4 ~~~y-~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 4 GPRY-QNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE---HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFES 79 (336)
T ss_pred ccce-EEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccc
Confidence 3455 78899999999999999999999999999886422 2334566788999999999999999988765332
Q ss_pred CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
...+++++|+++ ++|...+.. ..+++..+..++.|++.|+.+||+.+ ++|+||||+||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~--ivH~dlkp~Nill~~~-~~~kl~dfg~~~ 154 (336)
T cd07849 80 FNDVYIVQELME-TDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTN-CDLKICDFGLAR 154 (336)
T ss_pred cceEEEEehhcc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEECCC-CCEEECccccee
Confidence 245789999996 578776653 46899999999999999999999999 9999999999999865 589999999998
Q ss_pred eccccce---------eeeecccCccccCCCccccccceeeecc
Q 027788 180 IVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 180 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
....... ++..+.+|+.......++.++|+||+|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv 198 (336)
T cd07849 155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGC 198 (336)
T ss_pred eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHH
Confidence 7644322 1122334443444455677899999993
No 274
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=1.7e-27 Score=187.42 Aligned_cols=179 Identities=22% Similarity=0.367 Sum_probs=141.9
Q ss_pred ceeeeeeeeccccceEEEEEEecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEE---GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
..+.+.+.||+|+||.||+|.+... ...+++|...... .....+.+.+|+.+++.++|||++++++++..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--- 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT---SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN--- 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC---
Confidence 3357889999999999999987543 3568999876442 245567889999999999999999999988532
Q ss_pred eEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
..+++||++++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~ 156 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR--FVHRDIAARNVLVSSP-DCVKLGDFGLSRY 156 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccChheEEEecC-CCeEEccCceeee
Confidence 357899999999999998754 35899999999999999999999999 9999999999999865 5899999999987
Q ss_pred ccccceeee-------ecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRRIR-------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
......... .+.+| +......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 195 (270)
T cd05056 157 LEDESYYKASKGKLPIKWMAP-ESINFRRFTSASDVWMFG 195 (270)
T ss_pred cccccceecCCCCccccccCh-hhhccCCCCchhhhHHHH
Confidence 644321111 12223 334455577789999999
No 275
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96 E-value=6.3e-28 Score=191.88 Aligned_cols=179 Identities=25% Similarity=0.346 Sum_probs=138.3
Q ss_pred eeeeeeeccccceEEEEEEecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE-----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+++.+.||+|+||.||+|+... ....+++|.+.... .......+.+|+.+++.++||||+++++.+... .
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~ 76 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--G 76 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--C
Confidence 3677899999999999998653 23568888776432 344457788999999999999999999988544 4
Q ss_pred eEEEEeccccCCChHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCC
Q 027788 102 TLNFITEVCTSGNLREYRKKH------------------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLN 157 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~------------------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~ 157 (219)
..++++||+++++|.+++... ..++...+..++.|++.++.|||+.+ ++|+||+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--ivH~dik 154 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK--LVHRDLA 154 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC--eehhhhh
Confidence 577899999999999987532 23678889999999999999999999 9999999
Q ss_pred CCceEEeCCCCcEEEeccccceeccccce-------eeeecccCccccCCCccccccceeeec
Q 027788 158 CSNVFVNGNTGQVKIGDLGVAAIVGRAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 158 ~~nili~~~~~~~~l~dfg~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+||+++.+ +.++|+|||++........ .......+++......++.++|+||||
T Consensus 155 p~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 216 (290)
T cd05045 155 ARNVLVAEG-RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFG 216 (290)
T ss_pred hheEEEcCC-CcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHH
Confidence 999999855 5899999999976533221 111111222333455577889999999
No 276
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=1.5e-27 Score=190.06 Aligned_cols=180 Identities=24% Similarity=0.387 Sum_probs=141.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|.+|.||+|.+..+++.|++|.+..... .....+.+.+|+++++.++|+|++++++++.. ....+++
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 79 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE--DEGVPSTAIREISLLKEMQHGNIVRLQDVVHS--EKRLYLV 79 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc--cccchHHHHHHHHHHHhccCCCEeeEEEEEec--CCeEEEE
Confidence 3677999999999999999999999999998865432 22334667889999999999999999999854 4568899
Q ss_pred eccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||++ ++|.+++.... .+++..+..++.|++.|+.|||+++ ++|+||+|+||+++.+.+.++++|||++......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR--VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 99996 57777665433 3578888899999999999999999 9999999999999865557899999999765432
Q ss_pred ce------eeeecccCccccCCCccccccceeeec
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.. .+..+..|+.......++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 191 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVG 191 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHH
Confidence 21 112233333333445567789999999
No 277
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.95 E-value=7.2e-28 Score=189.94 Aligned_cols=176 Identities=23% Similarity=0.396 Sum_probs=146.0
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||.|++|.||+|.+..++..+++|.+.... .......+.+|+.+++.++|+|++++.+.+..+ ..+++++
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~ 78 (274)
T cd06609 4 TLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKLWIIM 78 (274)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeEEEEE
Confidence 66789999999999999999999999999987543 234456788999999999999999999988544 6788999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
|++++++|.+++... .+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++++|||++........
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG--KIHRDIKAANILLSEE-GDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEECCC-CCEEEcccccceeecccccc
Confidence 999999999988765 7899999999999999999999999 9999999999999865 5899999999988765421
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+ ++......++.++|+||+|
T Consensus 155 ~~~~~~~~~y~~-PE~~~~~~~~~~sDv~slG 185 (274)
T cd06609 155 RNTFVGTPFWMA-PEVIKQSGYDEKADIWSLG 185 (274)
T ss_pred cccccCCccccC-hhhhccCCCCchhhHHHHH
Confidence 1111223 3344444577889999999
No 278
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=3.7e-27 Score=206.42 Aligned_cols=181 Identities=18% Similarity=0.246 Sum_probs=145.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.++||+|+||.||+|++..+++.||+|+++.... ........+..|+.+++.++|+||+++++++.. ...++++
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~lV 82 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNMVHQVQAERDALALSKSPFIVHLYYSLQS--ANNVYLV 82 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--CCEEEEE
Confidence 4788999999999999999999999999999875433 234555778899999999999999999988854 4568999
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|.+++.....+++..++.++.|++.||.|||..+ |+||||||+|||++.+ +.++|+|||+++.......
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKP~NILl~~~-g~vkL~DFGls~~~~~~~~ 159 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG--IIHRDLKPDNMLISNE-GHIKLTDFGLSKVTLNREL 159 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCccHHHEEEcCC-CCEEEEeCCCCccccCCcc
Confidence 999999999999887778899999999999999999999999 9999999999999865 6899999999987654332
Q ss_pred ------eeeecccCccccCCCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+..+..|+..+....-...+++||+|
T Consensus 160 ~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 160 NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred cccccccCccccCccccccCCCCceeeeeeecC
Confidence 112222333332222223346777777
No 279
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95 E-value=8.9e-28 Score=198.92 Aligned_cols=179 Identities=25% Similarity=0.387 Sum_probs=138.4
Q ss_pred eeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDED 99 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~ 99 (219)
.+.+.+.||+|+||.||+|.. ..+++.||+|.++... .....+.+..|+.++.++. ||||+++++.+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~- 113 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA---RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG- 113 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC---ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC-
Confidence 346779999999999999984 3456789999987543 2333457889999999997 99999999999654
Q ss_pred CceEEEEeccccCCChHHHHHhCC--------------------------------------------------------
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHR-------------------------------------------------------- 123 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~-------------------------------------------------------- 123 (219)
..++++|||+++|+|.+++....
T Consensus 114 -~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 114 -GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred -CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 45788999999999998875321
Q ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCce
Q 027788 124 ------------------------------------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNV 161 (219)
Q Consensus 124 ------------------------------------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ni 161 (219)
.++...+..++.|++.|+.|||+.+ ++|+||||+||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrdlkp~Ni 270 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN--CVHRDLAARNV 270 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--cCcccCCcceE
Confidence 2456677889999999999999998 99999999999
Q ss_pred EEeCCCCcEEEeccccceeccccce---eee-----ecccCccccCCCccccccceeeec
Q 027788 162 FVNGNTGQVKIGDLGVAAIVGRAIR---RIR-----CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 162 li~~~~~~~~l~dfg~a~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+++.+ +.++++|||+++....... ... .+.+| +......++.++|+||+|
T Consensus 271 Ll~~~-~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~DvwslG 328 (401)
T cd05107 271 LICEG-KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAP-ESIFNNLYTTLSDVWSFG 328 (401)
T ss_pred EEeCC-CEEEEEecCcceecccccccccCCCcCCCCceeCh-HHhcCCCCCcHhHHHHHH
Confidence 99865 5899999999987543221 111 12222 223344567789999999
No 280
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.95 E-value=9.1e-28 Score=189.76 Aligned_cols=177 Identities=22% Similarity=0.336 Sum_probs=144.5
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+.||+|+||.||.|.+..++..+|+|.++... .....+.+.+|+.+++.++|+|++++++.+.. .+..+++|
T Consensus 7 ~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (277)
T cd06640 7 TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWIIM 81 (277)
T ss_pred hhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc---cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEEE
Confidence 55588999999999999998899999999987542 24456788999999999999999999999854 45788999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
||+++++|.+++.. .++++..+..++.|++.++.++|+.+ ++|+||+|+||+++.+ +.++++|||++.........
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~--ivH~dl~p~Nil~~~~-~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--ccCcCCChhhEEEcCC-CCEEEcccccceeccCCccc
Confidence 99999999998764 46889999999999999999999999 9999999999999865 58999999999776543321
Q ss_pred e-----eecccCccccCCCccccccceeeec
Q 027788 188 I-----RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 ~-----~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. .....+++.......+.++|+||+|
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG 188 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLG 188 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHH
Confidence 1 1112223334445567789999999
No 281
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=1.5e-27 Score=187.70 Aligned_cols=175 Identities=19% Similarity=0.283 Sum_probs=132.3
Q ss_pred eeeccccceEEEEEEec--CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQ--EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
+.||+|+||.||+|... .++..+++|.+.... .......+.+|+.++++++|||++++++.+. +...++++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT--EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--CCCCcEEEEE
Confidence 36899999999999753 455679999876443 2233356888999999999999999999884 3455788999
Q ss_pred cccCCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 109 VCTSGNLREYRKKHR-----HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~-----~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|+++++|.+++.... ..+...+..++.|++.++.|||+.+ ++|+||||+|++++.+ +.++++|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dlkp~nil~~~~-~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN--FIHSDLALRNCLLTAD-LTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--EeccccCcceEEEcCC-CcEEECCccccccccC
Confidence 999999999886432 3466778889999999999999999 9999999999999865 5899999999975443
Q ss_pred cceee--------eecccCccccCC------Cccccccceeeec
Q 027788 184 AIRRI--------RCWGRRSSWRRS------CTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~~~--------~~~~~~~~~~~~------~~~~~~~diws~g 213 (219)
..... ..+.+|+-.... ..++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 32111 112333322111 1246689999999
No 282
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.95 E-value=1.9e-27 Score=191.54 Aligned_cols=188 Identities=22% Similarity=0.364 Sum_probs=147.8
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
...++...| ...+.||+|+||.||++.+..++..+|+|.+...... .......+.+|+.++++++|+|++++++++..
T Consensus 19 ~~~~~~~~f-~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 96 (317)
T cd06635 19 FKEDPEKLF-TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR 96 (317)
T ss_pred cCCCchhhh-hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-chHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 445555554 7778999999999999999999999999988754322 34455778899999999999999999998854
Q ss_pred CCCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
.+..+++|||++ |++.+.+.. ...+++..+..++.|++.++.|||..+ ++|+||+|+||+++.+ +.++|+|||
T Consensus 97 --~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--i~H~dL~p~Nil~~~~-~~~kl~dfg 170 (317)
T cd06635 97 --EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFG 170 (317)
T ss_pred --CCeEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcccEEECCC-CCEEEecCC
Confidence 355788999997 467666543 456899999999999999999999999 9999999999999855 589999999
Q ss_pred cceeccccce--eeeecccCcccc--CCCccccccceeeec
Q 027788 177 VAAIVGRAIR--RIRCWGRRSSWR--RSCTMRITRSLWTYT 213 (219)
Q Consensus 177 ~a~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~diws~g 213 (219)
++........ ++..+.+|+.+. ....++.++|+||+|
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slG 211 (317)
T cd06635 171 SASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 211 (317)
T ss_pred CccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHH
Confidence 9876544322 222344444432 344577789999999
No 283
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=1.4e-27 Score=185.79 Aligned_cols=173 Identities=25% Similarity=0.414 Sum_probs=137.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|+||.||+|.. .++..+|+|.++... .......+.+|+++++.++|||++++++.+... ...+++|||+
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL---PQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC---CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEECC
Confidence 3689999999999985 468899999877443 234445688999999999999999999998544 4578899999
Q ss_pred cCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccceee-
Q 027788 111 TSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI- 188 (219)
Q Consensus 111 ~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~- 188 (219)
++++|.+++... ..+++..+..++.|++.++.++|..+ ++|+||+|+|++++.+ +.++++|||++..........
T Consensus 75 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~~H~dl~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~ 151 (250)
T cd05085 75 PGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSRQEDDGIYSSS 151 (250)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccChheEEEcCC-CeEEECCCccceeccccccccC
Confidence 999999987643 45789999999999999999999999 9999999999999855 589999999997644322111
Q ss_pred ------eecccCccccCCCccccccceeeec
Q 027788 189 ------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 189 ------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..+.+ ++......++.++|+||+|
T Consensus 152 ~~~~~~~~y~a-PE~~~~~~~~~~~Di~slG 181 (250)
T cd05085 152 GLKQIPIKWTA-PEALNYGRYSSESDVWSYG 181 (250)
T ss_pred CCCCCcccccC-HHHhccCCCCchhHHHHHH
Confidence 11222 2333445567789999999
No 284
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=4.8e-28 Score=197.06 Aligned_cols=185 Identities=25% Similarity=0.400 Sum_probs=145.7
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC-
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED- 99 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~- 99 (219)
+..++| .+.+.||.|+||.||+|.+..++..|++|.+.... ....+.+.+|++++++++|||++++++.+....
T Consensus 2 ~~~~~y-~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 2 DLGSRY-MDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred CcCcce-EEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----CchHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 345666 77799999999999999999999999999987553 233467888999999999999999987664332
Q ss_pred -----------CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC
Q 027788 100 -----------RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG 168 (219)
Q Consensus 100 -----------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~ 168 (219)
...+++++||++ ++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+|++++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g--ivH~dikp~Nili~~~~~ 152 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANVFINTEDL 152 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCc
Confidence 235789999997 588877653 46899999999999999999999999 999999999999986655
Q ss_pred cEEEeccccceeccccce---------eeeecccCccccCCCccccccceeeecc
Q 027788 169 QVKIGDLGVAAIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.++++|||.+........ ++..+.+|+.......++.++|+||+|+
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGv 207 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGC 207 (342)
T ss_pred eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHH
Confidence 789999999976533221 1122334443444456777899999993
No 285
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=4.6e-28 Score=196.52 Aligned_cols=182 Identities=24% Similarity=0.400 Sum_probs=145.7
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC--CCceE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE--DRNTL 103 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~--~~~~~ 103 (219)
.|.+.+.||+|++|.||+|.+..++..||+|.+..... .....+.+.+|+.++++++||||+++++++... ....+
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD--VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc--cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 34777999999999999999999999999999875432 233456778899999999999999998877432 34578
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++++||+. ++|.+++.....+++..+..++.|++.|+.|||..+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~Nil~~~~-~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN--VIHRDLKPSNLLVNED-CELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEecccccceeecc
Confidence 89999996 689888877777999999999999999999999999 9999999999999865 6899999999977643
Q ss_pred cce----------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR----------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~----------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+..|+.......++.++|+||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG 199 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVG 199 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHH
Confidence 221 111222333333335577889999999
No 286
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.95 E-value=6e-28 Score=191.24 Aligned_cols=180 Identities=26% Similarity=0.412 Sum_probs=143.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||.|++|.||+|.+..++..+++|.++.... .......+.+|++++++++|||++++++++. +....+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~v 77 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIH--TENKLYLV 77 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc--ccccchHHHHHHHHHHhcCCCCCcchhhhcc--cCCcEEEE
Confidence 3677899999999999999999999999998875432 2233457888999999999999999999884 45568899
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||++ ++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++++|||++......
T Consensus 78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--i~H~~l~p~nill~~~-~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTE-GAIKLADFGLARAFGVP 153 (284)
T ss_pred eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEeeccchhhcccC
Confidence 99996 5888877543 46889999999999999999999999 9999999999999866 58999999998766443
Q ss_pred ce------eeeecccCccccCCCccccccceeeecc
Q 027788 185 IR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.. ....+.+|+.......++.++|+||+|+
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 189 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC 189 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHH
Confidence 22 1112334443333444567799999993
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=1.6e-27 Score=185.83 Aligned_cols=177 Identities=28% Similarity=0.457 Sum_probs=143.8
Q ss_pred eeeeeeccccceEEEEEEecCCC----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEG----IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+.+.||.|+||.||+|.....+ ..+|+|.++... .....+.+..|+..++.++|+|++++++.+... ...
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 76 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA---DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPL 76 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC---ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--Cee
Confidence 45688999999999999988766 889999986442 222567889999999999999999999988544 568
Q ss_pred EEEeccccCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKHRH--VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++||++++++|.+++..... +++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++...
T Consensus 77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~--~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~ 153 (258)
T smart00219 77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAARNCLVGEN-LVVKISDFGLSRDL 153 (258)
T ss_pred EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC--eeecccccceEEEccC-CeEEEcccCCceec
Confidence 889999999999998875543 899999999999999999999999 9999999999999865 58999999999877
Q ss_pred cccceeee-------ecccCccccCCCccccccceeeec
Q 027788 182 GRAIRRIR-------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
........ .+.+| +......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~~~~y~~P-e~~~~~~~~~~~Di~slG 191 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAP-ESLKDGKFTSKSDVWSFG 191 (258)
T ss_pred ccccccccccCCCcccccCh-HHhccCCCCcchhHHHHH
Confidence 65422111 12222 333455677789999999
No 288
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95 E-value=1.3e-27 Score=188.28 Aligned_cols=185 Identities=20% Similarity=0.232 Sum_probs=140.3
Q ss_pred eeeeeeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC---
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR--- 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~--- 100 (219)
|++.+.||+|+||.||+|... .++..+|+|.+..... .....+.+.+|+.+++.++|||++++++++...+.
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF--SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC--ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 357789999999999999854 3578999999875432 34456778899999999999999999998754322
Q ss_pred -ceEEEEeccccCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 101 -NTLNFITEVCTSGNLREYRKKH------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 101 -~~~~lv~e~~~~g~L~~~~~~~------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
...+++++++++++|..++... ..++...+..++.|++.++.|||+.+ ++|+||||+||+++.+ +.++++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~nili~~~-~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN--FIHRDLAARNCMLNEN-MTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccchhhEEEcCC-CCEEEC
Confidence 2346788999999998776422 24788899999999999999999999 9999999999999855 589999
Q ss_pred ccccceecccccee-e-ee-----cccCccccCCCccccccceeeec--ccc
Q 027788 174 DLGVAAIVGRAIRR-I-RC-----WGRRSSWRRSCTMRITRSLWTYT--RLG 216 (219)
Q Consensus 174 dfg~a~~~~~~~~~-~-~~-----~~~~~~~~~~~~~~~~~diws~g--i~~ 216 (219)
|||+++........ . .. ...+++......++.++|+||+| +|+
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~e 207 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWE 207 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHH
Confidence 99999876433210 0 01 11112233444567789999999 444
No 289
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=2.1e-27 Score=194.05 Aligned_cols=182 Identities=25% Similarity=0.360 Sum_probs=144.6
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED--- 99 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 99 (219)
.++| ++.+.||+|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++|+|++++++++....
T Consensus 15 ~~~y-~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 15 LKRY-QNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ--NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hcce-EEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc--ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 4555 777999999999999999999999999998864322 3344567778999999999999999999885432
Q ss_pred -CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 100 -RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 100 -~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
....+++||+++ ++|.+.+... ++...+..++.|++.|+.+||..+ ++|+||||+||+++.+ +.++|+|||++
T Consensus 92 ~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nil~~~~-~~~kL~Dfg~~ 165 (353)
T cd07850 92 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD-CTLKILDFGLA 165 (353)
T ss_pred ccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCC-CCEEEccCccc
Confidence 235789999996 5787766543 889999999999999999999999 9999999999999866 58999999999
Q ss_pred eeccccce-----eeeecccCccccCCCccccccceeeecc
Q 027788 179 AIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 179 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
........ .+..+.+ ++......++.++|+||+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~a-PE~~~~~~~~~~~DvwslG~ 205 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRA-PEVILGMGYKENVDIWSVGC 205 (353)
T ss_pred eeCCCCCCCCCCcccccccC-HHHHhCCCCCCchhhHhHHH
Confidence 87654332 1112223 33445566788899999993
No 290
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=7e-28 Score=195.60 Aligned_cols=182 Identities=25% Similarity=0.360 Sum_probs=145.7
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCce
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 102 (219)
++| .+.+.||+|+||.||+|.+..++..+|+|.+..... .......+..|+.+++++ +|+||+++++++...+...
T Consensus 7 ~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 7 RKY-EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hHH-HHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 444 677899999999999999988999999998764322 223345677899999999 9999999999987666667
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++||+++ ++|..++... .+++.....++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~--i~H~dl~p~nill~~~-~~~kl~d~g~~~~~~ 158 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGN--VIHRDLKPSNILLNSD-CRVKLADFGLARSLS 158 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCC-CcEEEeeccchhccc
Confidence 899999997 5888877654 7788889999999999999999999 9999999999999865 689999999998765
Q ss_pred ccce-----------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR-----------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ++..+..|+.......++.++|+||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG 200 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG 200 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHH
Confidence 4321 111233343333445566789999999
No 291
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.95 E-value=1.7e-27 Score=188.51 Aligned_cols=179 Identities=22% Similarity=0.274 Sum_probs=140.3
Q ss_pred eeeeeeeeccccceEEEEEEe-----cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFD-----QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
-+++.++||+|+||.||++.. ..++..+++|.+... .....+.+.+|+++++.++|+||+++++++.. .
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 79 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTVLQHQHIVRFYGVCTE--G 79 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec--C
Confidence 346778999999999999964 335678899886633 34555788999999999999999999998854 4
Q ss_pred ceEEEEeccccCCChHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 101 NTLNFITEVCTSGNLREYRKKHR---------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~---------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
...++++||+++++|.+++.... .+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~nil~~~ 157 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH--FVHRDLATRNCLVGQ 157 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC--eecccccHhhEEEcC
Confidence 55788999999999999886542 3788899999999999999999999 999999999999985
Q ss_pred CCCcEEEeccccceeccccceee-------eecccCccccCCCccccccceeeec
Q 027788 166 NTGQVKIGDLGVAAIVGRAIRRI-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+ +.++|+|||++.......... .....+++......++.++|+||||
T Consensus 158 ~-~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 211 (280)
T cd05092 158 G-LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG 211 (280)
T ss_pred C-CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence 5 589999999997654322110 0111222334445577789999999
No 292
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=1.3e-27 Score=186.99 Aligned_cols=177 Identities=16% Similarity=0.237 Sum_probs=137.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHH-HhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLL-KTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l-~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|++|.||+|.+..+++.||+|.+...... .......+..|...+ ...+|+|++++++.+. ..+.+++++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--~~~~~~lv~e~ 78 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ--SKDYLYLVMEY 78 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE--cCCeEEEEEec
Confidence 5689999999999999999999999998643321 112223344555444 4558999999999984 44678899999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--e
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--R 187 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--~ 187 (219)
+++++|.++++....+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++........ +
T Consensus 79 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~ 155 (260)
T cd05611 79 LNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG--IIHRDIKPENLLIDQT-GHLKLTDFGLSRNGLENKKFVG 155 (260)
T ss_pred cCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CcEEEeecccceeccccccCCC
Confidence 999999999987778999999999999999999999999 9999999999999865 5899999999876543221 2
Q ss_pred eeecccCccccCCCccccccceeeecc
Q 027788 188 IRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
...+.+|+ ......++.++|+||+|+
T Consensus 156 ~~~y~~pe-~~~~~~~~~~~Dv~slG~ 181 (260)
T cd05611 156 TPDYLAPE-TILGVGDDKMSDWWSLGC 181 (260)
T ss_pred CcCccChh-hhcCCCCcchhhhHHHHH
Confidence 22233333 344444778899999993
No 293
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=9.6e-28 Score=191.68 Aligned_cols=181 Identities=25% Similarity=0.429 Sum_probs=142.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC-------
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED------- 99 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~------- 99 (219)
|.+.+.||+|+||.||+|....+++.||+|.++.... .......+.+|+.+++.++|||++++++++....
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE--KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc--ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 4778999999999999999999999999999875432 1222355678999999999999999998885443
Q ss_pred -CceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 100 -RNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 100 -~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...+++++|++++ ++..++.. ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--i~H~dl~p~nili~~~-~~~kl~dfg~ 162 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN--FLHRDIKCSNILLNNK-GQIKLADFGL 162 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CcEEeCcccc
Confidence 3478899999975 66666554 346899999999999999999999999 9999999999999865 5899999999
Q ss_pred ceeccccce-------eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+........ ....+.+|+.......++.++|+||+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG 205 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCG 205 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHH
Confidence 987644321 122234444343444567789999999
No 294
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.95 E-value=2.9e-27 Score=186.01 Aligned_cols=183 Identities=24% Similarity=0.449 Sum_probs=146.6
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCC-
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDED- 99 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~- 99 (219)
+.++| .+.+.||+|++|.||+|.+..++..+++|.+.... ...+.+.+|+.+++++ +|+|++++++.+....
T Consensus 4 ~~~~y-~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (275)
T cd06608 4 PTGIF-ELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP 77 (275)
T ss_pred chhhe-eheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence 44566 78899999999999999998899999999887442 2336688999999999 6999999999986533
Q ss_pred ---CceEEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEE
Q 027788 100 ---RNTLNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKI 172 (219)
Q Consensus 100 ---~~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l 172 (219)
...++++|||+++++|.+++.. ...+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.+++
T Consensus 78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~--i~H~~l~p~ni~~~~~-~~~~l 154 (275)
T cd06608 78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK--VIHRDIKGQNILLTKN-AEVKL 154 (275)
T ss_pred CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEEccC-CeEEE
Confidence 4568899999999999988754 246889999999999999999999999 9999999999999865 58999
Q ss_pred eccccceeccccce------eeeecccCcccc----CCCccccccceeeec
Q 027788 173 GDLGVAAIVGRAIR------RIRCWGRRSSWR----RSCTMRITRSLWTYT 213 (219)
Q Consensus 173 ~dfg~a~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~diws~g 213 (219)
+|||++........ ++..+.+|+.+. ....++.++|+||+|
T Consensus 155 ~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 205 (275)
T cd06608 155 VDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG 205 (275)
T ss_pred CCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhH
Confidence 99999876543222 122234444332 234466789999999
No 295
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.95 E-value=1.7e-27 Score=189.80 Aligned_cols=184 Identities=23% Similarity=0.395 Sum_probs=147.3
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
..+++.++| .+.+.||+|+||.||++.+..++..+++|.+.... ....+.+.+|+.+++.++|||++++++.+..
T Consensus 13 ~~~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~ 87 (293)
T cd06647 13 SVGDPKKKY-TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELIINEILVMRENKHPNIVNYLDSYLV 87 (293)
T ss_pred eccCchhhc-eeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHHHHHHHHHhhcCCCCeeehhheeee
Confidence 345566666 67799999999999999988889999999876432 2334678899999999999999999998854
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.+..++++||+++++|.+++... .++...+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++|+|||+
T Consensus 88 --~~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~g--i~H~dL~p~Nili~~~-~~~kL~dfg~ 161 (293)
T cd06647 88 --GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD-GSVKLTDFGF 161 (293)
T ss_pred --CCcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC--EeeccCCHHHEEEcCC-CCEEEccCcc
Confidence 35578899999999999987643 5788899999999999999999999 9999999999999865 5899999998
Q ss_pred ceecccccee------eeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIRR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+......... +..+..| +......++.++|+||+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~~P-E~~~~~~~~~~~Dv~slG 202 (293)
T cd06647 162 CAQITPEQSKRSTMVGTPYWMAP-EVVTRKAYGPKVDIWSLG 202 (293)
T ss_pred eecccccccccccccCChhhcCc-hhhccCCCCchhhHHHHH
Confidence 8765443321 1112333 333445567789999999
No 296
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.95 E-value=2.6e-27 Score=185.68 Aligned_cols=179 Identities=24% Similarity=0.422 Sum_probs=145.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||.|+||.||+|....++..+++|++..... ....+.+.+|+++++.++|+|++++++.+.. .+..+++
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv 77 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC---QTSVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLV 77 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc---chHHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEE
Confidence 4778999999999999999888999999999875432 2256788999999999999999999988844 4568899
Q ss_pred eccccCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 107 TEVCTSGNLREYRKKH---RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+|++++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++..+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~--i~h~~l~p~ni~~~~~-~~~~l~df~~~~~~~~ 154 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG--QIHRDIKAGNILLGED-GSVKIADFGVSASLAD 154 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHhEEEcCC-CCEEEcccchHHHhcc
Confidence 9999999999988653 35899999999999999999999999 9999999999999865 5899999999877755
Q ss_pred ccee----------eeecccCccccCCCccccccceeeec
Q 027788 184 AIRR----------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~~----------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... +..+..|+.......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG 194 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG 194 (267)
T ss_pred CccccccccccccCChhhcChHHHccccCcCcccchHhHh
Confidence 4322 11122333333333677789999999
No 297
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=7.1e-28 Score=190.82 Aligned_cols=178 Identities=26% Similarity=0.360 Sum_probs=139.5
Q ss_pred eeeeeeeccccceEEEEEEecC-----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE-----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+++.+.||+|+||.||+|.... .+..||+|.++... .....+.+.+|+.++..++||||+++++.+... .
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~ 81 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA---EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--Q 81 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC---CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--C
Confidence 4677899999999999998653 35789999987442 334457788999999999999999999998544 4
Q ss_pred eEEEEeccccCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 102 TLNFITEVCTSGNLREYRKKH----------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~----------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
.+++++||+++++|.+++... ..+++..+..++.|++.|+.|+|+.+ ++||||||+||+++.
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g--i~H~dlkp~Nil~~~ 159 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH--VVHKDLATRNVLVFD 159 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC--ccccccchhheEecC
Confidence 578899999999999887421 23678888999999999999999999 999999999999985
Q ss_pred CCCcEEEeccccceecccccee--------eeecccCccccCCCccccccceeeec
Q 027788 166 NTGQVKIGDLGVAAIVGRAIRR--------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+ +.++|+|||+++........ +..+.+|+. .....++.++|+||+|
T Consensus 160 ~-~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~-~~~~~~~~~~Dv~slG 213 (283)
T cd05091 160 K-LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEA-IMYGKFSIDSDIWSYG 213 (283)
T ss_pred C-CceEecccccccccccchheeeccCccCCccccCHHH-HhcCCCCcchhHHHHH
Confidence 5 58999999998866433211 112333332 3344567789999999
No 298
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=202.19 Aligned_cols=167 Identities=29% Similarity=0.455 Sum_probs=140.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+-+|+|+-|.||+|+.. ++.||||.++.-. -.+|+=|++|+|+||+.+.++| ...+.++++||||
T Consensus 130 eWlGSGaQGAVF~Grl~--netVAVKKV~elk-----------ETdIKHLRkLkH~NII~FkGVC--tqsPcyCIiMEfC 194 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH--NETVAVKKVRELK-----------ETDIKHLRKLKHPNIITFKGVC--TQSPCYCIIMEFC 194 (904)
T ss_pred hhhccCcccceeeeecc--CceehhHHHhhhh-----------hhhHHHHHhccCcceeeEeeee--cCCceeEEeeecc
Confidence 35899999999999753 5789999765321 1578889999999999999999 4557899999999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
+.|-|...++....+.......|..+|+.|+.|||.+. |+|||||.-||||..++ .+||+|||.++-.....+
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK--IIHRDLKSPNiLIs~~d-~VKIsDFGTS~e~~~~STkMSF 271 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK--IIHRDLKSPNILISYDD-VVKISDFGTSKELSDKSTKMSF 271 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh--HhhhccCCCceEeeccc-eEEeccccchHhhhhhhhhhhh
Confidence 99999999998889999999999999999999999999 99999999999999775 799999999988766554
Q ss_pred -eeeecccCccccCCCccccccceeeec--ccc
Q 027788 187 -RIRCWGRRSSWRRSCTMRITRSLWTYT--RLG 216 (219)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~diws~g--i~~ 216 (219)
++.+|.+|+ ..++.+.+-|-|||||| .|.
T Consensus 272 aGTVaWMAPE-vIrnePcsEKVDIwSfGVVLWE 303 (904)
T KOG4721|consen 272 AGTVAWMAPE-VIRNEPCSEKVDIWSFGVVLWE 303 (904)
T ss_pred hhhHhhhCHH-HhhcCCcccccceehhHHHHHH
Confidence 444555553 44555666789999999 554
No 299
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=1.4e-27 Score=189.07 Aligned_cols=178 Identities=27% Similarity=0.454 Sum_probs=141.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||.|++|.||+|++..++..||+|.++.... ......+.+|+.++++++|+|++++++.+... +..+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 76 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLMLV 76 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc---ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEEE
Confidence 3677899999999999999999999999999876532 22235677899999999999999999998654 457889
Q ss_pred eccccCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 107 TEVCTSGNLREYRKKH---RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
||++++ +|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++.....
T Consensus 77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~h~dl~p~ni~~~~~-~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR--VLHRDLKPQNLLINKR-GELKLADFGLARAFGI 152 (284)
T ss_pred EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEECCC-CcEEEeecchhhhhcC
Confidence 999974 787776543 35899999999999999999999999 9999999999999855 6899999999976543
Q ss_pred cce------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... .+..+..|+.......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 188 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVG 188 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHH
Confidence 221 111233343344445567789999999
No 300
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.95 E-value=1.6e-27 Score=186.58 Aligned_cols=178 Identities=23% Similarity=0.381 Sum_probs=142.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
...+.+.+.||+|++|.||+|... .+..+++|.+.... ...+.+.+|+.++++++|+|++++++.+.. ...+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 76 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPI 76 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-----cCHHHHHHHHHHHhhCCCCCEeeeeeeeec--CCce
Confidence 344588899999999999999865 45779999887432 223668899999999999999999998844 3557
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++||++++++|.+++... ..++...+..++.|++.++.+||+++ ++|+||+|+||+++.+ +.++++|||++...
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~ 153 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN--YIHRDLAARNILVGEN-LVCKIADFGLARLI 153 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCcchheEEEcCC-CCEEECccccceec
Confidence 8899999999999988654 36889999999999999999999999 9999999999999866 68999999999876
Q ss_pred ccccee-------eeecccCccccCCCccccccceeeec
Q 027788 182 GRAIRR-------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...... ...+.+ ++......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~Di~slG 191 (261)
T cd05034 154 EDDEYTAREGAKFPIKWTA-PEAANYGRFTIKSDVWSFG 191 (261)
T ss_pred cchhhhhhhccCCCccccC-HHHhccCCcCchhHHHHHH
Confidence 532210 011223 3334445567789999999
No 301
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=1.2e-27 Score=191.59 Aligned_cols=178 Identities=25% Similarity=0.438 Sum_probs=139.7
Q ss_pred eeeeeeeeccccceEEEEEEecCCCc----EEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGI----EVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
.++..+.||+|+||.||+|....++. .+|+|.+.... .......+.+|+.+++.++|||++++++.+....
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-- 82 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT-- 82 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC--
Confidence 34677899999999999999877775 46888766432 2344456889999999999999999999885432
Q ss_pred eEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++++|++++|+|.+++... ..+++..+..++.|++.|+.|||+++ ++|+||||+||+++.+ +.+||+|||+++.
T Consensus 83 -~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dikp~Nill~~~-~~~kL~Dfg~~~~ 158 (303)
T cd05110 83 -IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSP-NHVKITDFGLARL 158 (303)
T ss_pred -ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC--eeccccccceeeecCC-CceEEcccccccc
Confidence 46799999999999988654 35889999999999999999999999 9999999999999855 5899999999987
Q ss_pred ccccceeee--------ecccCccccCCCccccccceeeec
Q 027788 181 VGRAIRRIR--------CWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~diws~g 213 (219)
......... .+.+ ++......++.++|+||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~-PE~~~~~~~~~~~DiwslG 198 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMA-LECIHYRKFTHQSDVWSYG 198 (303)
T ss_pred ccCcccccccCCCccccccCC-HHHhccCCCChHHHHHHHH
Confidence 654332111 1222 2334455677789999999
No 302
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=2e-27 Score=188.20 Aligned_cols=180 Identities=21% Similarity=0.393 Sum_probs=145.9
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||+|....++..+|+|.+.... ........+.+|+.+++.++|+|++++++++........++++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 56789999999999999999999999999998654 2334446788899999999999999999998655346788999
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||++ ++|..++... ..+++..+..++.|++.|+.+||..+ ++|+||+|+||+++.+ +.++++|||++........
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--~~h~dl~p~nil~~~~-~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG--ILHRDIKGSNILINND-GVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEEcCC-CCEEEccccceeeccCCCc
Confidence 9997 4888877654 57899999999999999999999999 9999999999999865 6899999999987765431
Q ss_pred -------eeeecccCccccCCCccccccceeeec
Q 027788 187 -------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+..+.+|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG 189 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVG 189 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHH
Confidence 111233343333344567789999999
No 303
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.95 E-value=4.2e-28 Score=191.63 Aligned_cols=176 Identities=24% Similarity=0.373 Sum_probs=143.8
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+.||+|+||.||+|.+..++..||+|.++... .....+.+.+|+.+++.++|||++++++.+. ..+.+++++
T Consensus 7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 81 (277)
T cd06642 7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYITRYYGSYL--KGTKLWIIM 81 (277)
T ss_pred HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc---chHHHHHHHHHHHHHHcCCCCccHhhhcccc--cCCceEEEE
Confidence 45578999999999999999899999999887442 2344577889999999999999999999884 445688999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
||+++++|.+++.. ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++|||++..+.....
T Consensus 82 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~--ivH~dl~p~ni~i~~~-~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06642 82 EYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER--KIHRDIKAANVLLSEQ-GDVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred EccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC--eeccCCChheEEEeCC-CCEEEccccccccccCcchh
Confidence 99999999988764 46889999999999999999999999 9999999999999865 6899999999977654321
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+...+.+| +......++.++|+||+|
T Consensus 158 ~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 188 (277)
T cd06642 158 RNTFVGTPFWMAP-EVIKQSAYDFKADIWSLG 188 (277)
T ss_pred hhcccCcccccCH-HHhCcCCCchhhhHHHHH
Confidence 11122333 334445677789999999
No 304
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95 E-value=1.9e-27 Score=189.35 Aligned_cols=183 Identities=26% Similarity=0.399 Sum_probs=141.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCC---ce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDR---NT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~---~~ 102 (219)
|++.+.||+|+||.||+|.+..+++.||+|.++.... .......+.+|+.+++.+. |+|++++++++...+. ..
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc--ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3677899999999999999999999999998775432 2223356778999999995 5999999988865432 24
Q ss_pred EEEEeccccCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 103 LNFITEVCTSGNLREYRKKH-----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
++++|||+++ +|.+++... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.+.+.++|+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~--i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG--VMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEecCCCeEEEeeccc
Confidence 7899999985 787776432 34789999999999999999999999 999999999999996456899999999
Q ss_pred ceeccccce------eeeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+..+..... ....+.+|+.......++.++|+||+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ 200 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGC 200 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence 986644322 1112333333334455677899999993
No 305
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.95 E-value=2.5e-27 Score=187.56 Aligned_cols=184 Identities=25% Similarity=0.449 Sum_probs=145.1
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecC-
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDE- 98 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~- 98 (219)
++.+.| .+.+.||+|+||.||+|.+..+++.+|+|.+... ......+..|+.+++++ +|+|++++++.+...
T Consensus 13 ~~~~~~-~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 13 DPAGIF-ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred Chhhhh-hhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 455666 7779999999999999999999999999987643 23345678899999888 699999999988532
Q ss_pred ---CCceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 99 ---DRNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 99 ---~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
..+.++++|||+++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--ivH~dl~~~nili~~~-~~~~l~ 163 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK--VIHRDIKGQNVLLTEN-AEVKLV 163 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEe
Confidence 346789999999999999988653 35788889999999999999999999 9999999999999855 589999
Q ss_pred ccccceeccccce------eeeecccCccccC----CCccccccceeeec
Q 027788 174 DLGVAAIVGRAIR------RIRCWGRRSSWRR----SCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~diws~g 213 (219)
|||++........ ++..+.+|+.... ...++.++|+||+|
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG 213 (282)
T cd06636 164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213 (282)
T ss_pred eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence 9999876543221 2222333433221 34567789999999
No 306
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.95 E-value=2.3e-27 Score=185.14 Aligned_cols=173 Identities=23% Similarity=0.403 Sum_probs=138.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|+||.||++. .+++.+|+|.++.. ...+.+.+|+.++++++|||++++++++.... .+++
T Consensus 8 ~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~---~~~v 76 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD------VTAQAFLEETAVMTKLHHKNLVRLLGVILHNG---LYIV 76 (254)
T ss_pred ceeeeeeccCCCCceEecc--cCCCceEEEeecCc------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC---cEEE
Confidence 4788999999999999985 46788999987643 22367889999999999999999999885432 6789
Q ss_pred eccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|||+++++|.+++.... .++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--~~H~dl~p~nili~~~-~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK--LVHRDLAARNILVSED-GVAKVSDFGLARVGSMG 153 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccccCcceEEEcCC-CcEEECCCccceecccc
Confidence 99999999999886543 4789999999999999999999999 9999999999999865 58999999999765433
Q ss_pred ceee--eecccCccccCCCccccccceeeec
Q 027788 185 IRRI--RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~~--~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... .....+++......++.++|+||+|
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG 184 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYG 184 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHH
Confidence 2211 1112233444556677789999999
No 307
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.95 E-value=1.9e-27 Score=188.88 Aligned_cols=178 Identities=24% Similarity=0.299 Sum_probs=140.6
Q ss_pred eeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
+++.+.||+|+||.||+|.+. .++..+|+|.+.... .....+.+.+|+.++++++|||++++++++... .
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--~ 81 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDHPNIVKLLGVCAVG--K 81 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc---CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--C
Confidence 478899999999999999864 367889999887432 344557788999999999999999999988544 4
Q ss_pred eEEEEeccccCCChHHHHHhC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 027788 102 TLNFITEVCTSGNLREYRKKH----------------------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCS 159 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~----------------------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ 159 (219)
.+++++|++++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~--i~H~dl~p~ 159 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK--FVHRDLATR 159 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--eecccccHh
Confidence 578899999999999988632 13677888999999999999999999 999999999
Q ss_pred ceEEeCCCCcEEEeccccceeccccce--------eeeecccCccccCCCccccccceeeec
Q 027788 160 NVFVNGNTGQVKIGDLGVAAIVGRAIR--------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 160 nili~~~~~~~~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|++++.+ +.++++|||++........ ....+.+| +......++.++|+||+|
T Consensus 160 nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 219 (288)
T cd05050 160 NCLVGEN-MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPP-ESIFYNRYTTESDVWAYG 219 (288)
T ss_pred heEecCC-CceEECccccceecccCccccccCCCccChhhcCH-HHHhcCCCCchhHHHHHH
Confidence 9999855 6899999999986543321 00112222 333445677789999999
No 308
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95 E-value=1.9e-27 Score=186.26 Aligned_cols=175 Identities=21% Similarity=0.351 Sum_probs=135.4
Q ss_pred eeeccccceEEEEEEecC---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQE---EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|+||.||+|.... ....+|+|.+.... .....+.+..|+.+++.++|||++++++.+... .+..++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEE
Confidence 468999999999998643 34579999875321 344567888999999999999999999977533 34567899
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||+++++|.+++... .......+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||+++.......
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlk~~nili~~~-~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK--FVHRDLAARNCMLDES-FTVKVADFGLARDIYDKEY 153 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCccccccccCCcc
Confidence 999999999998654 34667788889999999999999999 9999999999999865 5899999999976543211
Q ss_pred ----------eeeecccCccccCCCccccccceeeec
Q 027788 187 ----------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ----------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+.+|+ ......++.++|+||||
T Consensus 154 ~~~~~~~~~~~~~~y~aPE-~~~~~~~~~~~Di~slG 189 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALE-SLQTQKFTTKSDVWSFG 189 (262)
T ss_pred eeecccccCcCCccccChh-HhccCccchHHHHHHHH
Confidence 111223333 33445677789999999
No 309
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-27 Score=200.12 Aligned_cols=189 Identities=23% Similarity=0.374 Sum_probs=154.7
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEec--
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRD-- 97 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-- 97 (219)
||...+ .+...||.|.+|.||++...++++..|+|+.+.... .-+++..|.++++.. .|||+..+++++..
T Consensus 16 dp~d~~-ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 16 DPADIF-EIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CCCCcc-EEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-----ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 344444 788999999999999999999999999998775432 226677889999877 58999999988854
Q ss_pred -CCCceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEec
Q 027788 98 -EDRNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGD 174 (219)
Q Consensus 98 -~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~d 174 (219)
...+-+|||||+|.+|+..++.+.. ..+.+..+..|++.++.|+..||.+. ++|||+|-.|||++.+ +.||+.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk--viHRDikG~NiLLT~e-~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK--VIHRDIKGQNVLLTEN-AEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc--eeeecccCceEEEecc-CcEEEee
Confidence 3346799999999999999988643 56889999999999999999999988 9999999999999977 5899999
Q ss_pred cccceeccccce------eeeecccCcc----ccCCCccccccceeeecccccc
Q 027788 175 LGVAAIVGRAIR------RIRCWGRRSS----WRRSCTMRITRSLWTYTRLGCA 218 (219)
Q Consensus 175 fg~a~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~diws~gi~~~~ 218 (219)
||++..+.+... ++.+|-+|+- -.....|+..+|+|||||+|+.
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIE 220 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIE 220 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeeh
Confidence 999999877664 3334444442 2356668888999999999874
No 310
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=3.3e-27 Score=186.58 Aligned_cols=177 Identities=22% Similarity=0.357 Sum_probs=143.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|+||.||+|.+..++..+|+|.+.... .....+.+.+|+.++++++|||++++++.+.. .+..+++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 80 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWII 80 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEE
Confidence 466788999999999999998899999999876432 23455778899999999999999999998844 4568899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+++++|..++.. ..+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++++|||++........
T Consensus 81 ~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~p~Ni~i~~~-~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06641 81 MEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEH-GEVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCC--eecCCCCHHhEEECCC-CCEEEeecccceecccchh
Confidence 999999999988764 36889999999999999999999999 9999999999999855 6899999999877654321
Q ss_pred ------eeeecccCccccCCCccccccceeeec
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+..+.+| +.......+.++|+||+|
T Consensus 157 ~~~~~~~~~~y~~P-E~~~~~~~~~~~Dv~slG 188 (277)
T cd06641 157 KRNTFVGTPFWMAP-EVIKQSAYDSKADIWSLG 188 (277)
T ss_pred hhccccCCccccCh-hhhccCCCCchhhHHHHH
Confidence 11112223 333344566789999999
No 311
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.95 E-value=6.1e-27 Score=185.31 Aligned_cols=178 Identities=22% Similarity=0.328 Sum_probs=136.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHH-HHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRL-LKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~-l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|+||.||++.+..+++.||+|.++.... ... ...+..|+.. ++.++|||++++++.+.. ...+++
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~--~~~~~l 77 (283)
T cd06617 3 LEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--SQE-QKRLLMDLDISMRSVDCPYTVTFYGALFR--EGDVWI 77 (283)
T ss_pred ceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--cHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEec--CCcEEE
Confidence 3677899999999999999999999999999875432 122 2344556664 667789999999999854 345888
Q ss_pred EeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 106 ITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
+|||++ ++|.+++.. ...+++..+..++.|++.|+.|||++ + ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 78 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~--i~h~dlkp~nil~~~~-~~~kl~dfg~~~~ 153 (283)
T cd06617 78 CMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRN-GQVKLCDFGISGY 153 (283)
T ss_pred Ehhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCC-CCEEEeecccccc
Confidence 999996 678776643 24688999999999999999999986 8 9999999999999865 5899999999987
Q ss_pred ccccce-----eeeecccCccccC---CCccccccceeeec
Q 027788 181 VGRAIR-----RIRCWGRRSSWRR---SCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~diws~g 213 (219)
...... ++..+.+|+.+.. ...++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG 194 (283)
T cd06617 154 LVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLG 194 (283)
T ss_pred cccccccccccCCccccChhhcCCcccccccCccccchhhH
Confidence 644322 1222334443322 13456789999999
No 312
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=2.7e-27 Score=192.74 Aligned_cols=187 Identities=26% Similarity=0.385 Sum_probs=145.6
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
+...++| .+.+.||+|+||.||+|.+..++..||+|.++... ......+.+.+|+.++++++||||+++.+++....
T Consensus 11 ~~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 11 WEVPDRY-RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred hccccce-EEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 3455666 67799999999999999999999999999886432 13334467889999999999999999999885433
Q ss_pred C----ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 100 R----NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 100 ~----~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
. ..++++||++ +++|..++.. ..+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++++||
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~g--i~H~dlkp~Nill~~~-~~~kl~df 162 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAG--IIHRDLKPGNLAVNED-CELKILDF 162 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeec
Confidence 2 2468899998 6788887654 46899999999999999999999999 9999999999999855 68999999
Q ss_pred ccceeccccce---eeeecccCccccCCCccccccceeeecc
Q 027788 176 GVAAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 176 g~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
|++........ .+..+.+|+.......++.++|+||+|+
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 204 (343)
T cd07880 163 GLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGC 204 (343)
T ss_pred ccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHH
Confidence 99986644322 1112223333332234667799999993
No 313
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=4.1e-27 Score=183.20 Aligned_cols=174 Identities=25% Similarity=0.393 Sum_probs=139.3
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
++||+|++|.||+|.+.. ++.|++|.+.... .......+.+|++++++++|+|++++++++... ...++++|++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTL---PPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEEcC
Confidence 468999999999999877 9999999877543 224557889999999999999999999988544 5578899999
Q ss_pred cCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee--
Q 027788 111 TSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR-- 187 (219)
Q Consensus 111 ~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~-- 187 (219)
++++|.+++.. ...++...+..++.+++.++.+||+++ ++|+||+|+||+++.+ +.++|+|||++.........
T Consensus 75 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~--i~h~di~p~nili~~~-~~~~l~d~g~~~~~~~~~~~~~ 151 (251)
T cd05041 75 PGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN--CIHRDLAARNCLVGEN-NVLKISDFGMSREEEGGIYTVS 151 (251)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--EehhhcCcceEEEcCC-CcEEEeeccccccccCCcceec
Confidence 99999998864 346789999999999999999999999 9999999999999865 58999999999865422110
Q ss_pred -----eeecccCccccCCCccccccceeeec
Q 027788 188 -----IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 188 -----~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
......+++......++.++|+||+|
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG 182 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYG 182 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHH
Confidence 01112223344445677789999999
No 314
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.95 E-value=7.3e-27 Score=182.92 Aligned_cols=178 Identities=23% Similarity=0.375 Sum_probs=140.1
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
...+++.++||+|+||.||++... .+..+++|.+... ....+.+.+|+.+++.++|+|++++++.+.. ...
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~ 75 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPI 75 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCe
Confidence 344589999999999999999754 5567999987632 2234678889999999999999999988854 447
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++|||+++++|.+++... ..++...+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++++|||.+...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~ 152 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSAS-LVCKIADFGLARVI 152 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC--ccccccCcceEEEcCC-CcEEECCCcceeec
Confidence 8899999999999988653 35788889999999999999999999 9999999999999865 68999999999766
Q ss_pred cccceee------eecccCccccCCCccccccceeeec
Q 027788 182 GRAIRRI------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~~------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....... .....+++......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG 190 (260)
T cd05073 153 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 190 (260)
T ss_pred cCCCcccccCCcccccccCHhHhccCCcCccccchHHH
Confidence 4322110 0112223344455677789999999
No 315
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=7.8e-27 Score=181.72 Aligned_cols=179 Identities=23% Similarity=0.445 Sum_probs=147.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||.|++|.||++.+..++..+++|.+..... .....+.+..|+++++.++|+|++++.+.+... ...+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~lv 77 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM--SEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLCIV 77 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC--ChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEEEE
Confidence 3677899999999999999998999999999876543 334557788999999999999999999988544 678899
Q ss_pred eccccCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKKH----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|++++++|..++... ..+++..+..++.+++.++.+||+.+ ++|+||+|+|++++.+ +.++|+|||++....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~~H~dl~~~nil~~~~-~~~~l~d~~~~~~~~ 154 (258)
T cd08215 78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK--ILHRDIKPQNIFLTSN-GLVKLGDFGISKVLS 154 (258)
T ss_pred EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHHeEEcCC-CcEEECCccceeecc
Confidence 9999999999988653 56899999999999999999999999 9999999999999865 589999999998765
Q ss_pred ccce------eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ++..+.+| +......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~y~~p-e~~~~~~~~~~~Dv~slG 190 (258)
T cd08215 155 STVDLAKTVVGTPYYLSP-ELCQNKPYNYKSDIWSLG 190 (258)
T ss_pred cCcceecceeeeecccCh-hHhccCCCCccccHHHHH
Confidence 5431 22223333 334445577789999999
No 316
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.95 E-value=3.9e-27 Score=183.67 Aligned_cols=178 Identities=24% Similarity=0.432 Sum_probs=146.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+| .+.+.||+|++|.||+|....++..+++|.+.... ..+.+.+|+.++++++|+|++++++.+... ..+
T Consensus 3 ~~y-~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~ 73 (256)
T cd06612 3 EVF-DILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE------DLQEIIKEISILKQCDSPYIVKYYGSYFKN--TDL 73 (256)
T ss_pred ccc-hhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH------HHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CcE
Confidence 344 67789999999999999998889999999887432 257889999999999999999999988544 668
Q ss_pred EEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 104 NFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|++++++|.+++.. ...+++..+..++.|++.++.+||..+ ++|+||+|+||+++.+ +.++|+|||++....
T Consensus 74 ~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~ni~~~~~-~~~~l~dfg~~~~~~ 150 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK--KIHRDIKAGNILLNEE-GQAKLADFGVSGQLT 150 (256)
T ss_pred EEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEECCC-CcEEEcccccchhcc
Confidence 899999999999998865 356899999999999999999999999 9999999999999865 589999999998765
Q ss_pred ccce------eeeecccCccccCCCccccccceeeecc
Q 027788 183 RAIR------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 183 ~~~~------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... +...+.+| +......++.++|+||+|+
T Consensus 151 ~~~~~~~~~~~~~~y~~P-E~~~~~~~~~~~Di~s~G~ 187 (256)
T cd06612 151 DTMAKRNTVIGTPFWMAP-EVIQEIGYNNKADIWSLGI 187 (256)
T ss_pred cCccccccccCCccccCH-HHHhcCCCCchhhHHHHHH
Confidence 5431 11122233 3344456777899999993
No 317
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=1.4e-27 Score=189.03 Aligned_cols=178 Identities=28% Similarity=0.439 Sum_probs=143.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||.|++|.||+|.+..+|..|++|.+..... .....+.+.+|+++++.++|||++++++.+. +....++++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~--~~~~~~iv~ 77 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPSTAIREISLLKELNHPNIVRLLDVVH--SENKLYLVF 77 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhHHHHHHHHHHhcCCCCccCHhheec--cCCeEEEEE
Confidence 566899999999999999999999999999875532 2233356788999999999999999999885 446788999
Q ss_pred ccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||++ ++|.+++.... .+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.......
T Consensus 78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR--VLHRDLKPQNLLIDRE-GALKLADFGLARAFGVPV 153 (283)
T ss_pred eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCC-CcEEEeecccccccCCCc
Confidence 9995 68988887654 6899999999999999999999999 9999999999999865 689999999997654322
Q ss_pred e------eeeecccCccccCCCccccccceeeec
Q 027788 186 R------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ....+.+|+.......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 187 (283)
T cd07835 154 RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIG 187 (283)
T ss_pred cccCccccccCCCCCceeecCcccCcHHHHHHHH
Confidence 1 111233344344444567789999999
No 318
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=1.4e-27 Score=191.32 Aligned_cols=185 Identities=21% Similarity=0.364 Sum_probs=142.8
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED--- 99 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~--- 99 (219)
.++| .+.+.||+|++|.||+|.+..++..+++|.+...... ......+.+|+++++.++|+||+++++.+....
T Consensus 7 ~~~y-~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 7 LRDY-EILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS 83 (311)
T ss_pred cccE-EEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--CCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence 3555 7889999999999999999999999999998754321 122245668999999999999999988775433
Q ss_pred ---CceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 100 ---RNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 100 ---~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
...+++++||+++ ++...+.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+||
T Consensus 84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~--i~H~dl~p~nil~~~~-~~~~l~df 159 (311)
T cd07866 84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH--ILHRDIKAANILIDNQ-GILKIADF 159 (311)
T ss_pred cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC-CCEEECcC
Confidence 2357899999964 66665543 457999999999999999999999999 9999999999999865 58999999
Q ss_pred ccceecccccee-----------------eeecccCccccCCCccccccceeeecc
Q 027788 176 GVAAIVGRAIRR-----------------IRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 176 g~a~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
|++......... +..+.+|+.......++.++|+||+|+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 215 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC 215 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHH
Confidence 999866443221 111333333333445677899999993
No 319
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=2.8e-27 Score=186.17 Aligned_cols=175 Identities=18% Similarity=0.276 Sum_probs=129.3
Q ss_pred eeeccccceEEEEEEecCC--CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQEE--GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
+.||+|+||.||+|..... ...+++|.++... .....+.+.+|+.+++.++|||++++++.+.. ....+++||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA---SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC---ChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEEEEe
Confidence 3699999999999964322 2345566554332 23445788999999999999999999999854 456788999
Q ss_pred cccCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 109 VCTSGNLREYRKKH----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 109 ~~~~g~L~~~~~~~----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
|+++++|.+++... ...+...+..++.|++.|+.|||+.+ ++|+||||+||+++.+ +.++|+|||++......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~--i~H~dikp~nil~~~~-~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN--FLHSDLALRNCFLTSD-LTVKVGDYGIGPSRYKE 152 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC--eeccCCccceEEEcCC-ccEEecccccccccCcc
Confidence 99999999988643 23566778889999999999999999 9999999999999865 58999999998643221
Q ss_pred ce--------eeeecccCccccC------CCccccccceeeec
Q 027788 185 IR--------RIRCWGRRSSWRR------SCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~--------~~~~~~~~~~~~~------~~~~~~~~diws~g 213 (219)
.. .+..+.+|+.... ...++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 195 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALG 195 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHH
Confidence 10 1112333332211 12345679999999
No 320
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.95 E-value=1.9e-27 Score=185.66 Aligned_cols=173 Identities=26% Similarity=0.439 Sum_probs=139.4
Q ss_pred eeeccccceEEEEEEecC-CC--cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQE-EG--IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~-~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.||+|++|.||+|.+.. .+ ..+|+|.+..... ....+.+.+|+.++++++|||++++++.+.. ..+++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL---SDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc---HHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEE
Confidence 468999999999998755 23 3689998876542 1566889999999999999999999998854 6688999
Q ss_pred ccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|++++++|.+.+.... .+++..+..++.|++.|+.+||..+ ++|+||+|+|++++.+ +.++|+|||++.......
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~--i~H~di~p~nil~~~~-~~~kl~dfg~~~~~~~~~ 151 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR--FIHRDLAARNILLASD-DKVKIGDFGLMRALPQNE 151 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC--ccccccCcccEEEecC-CEEEeccccccccccccc
Confidence 9999999999886543 6889999999999999999999999 9999999999999966 689999999998775532
Q ss_pred e---------eeeecccCccccCCCccccccceeeec
Q 027788 186 R---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ....+ .+++......++.++|+||+|
T Consensus 152 ~~~~~~~~~~~~~~y-~~pE~~~~~~~~~~~Di~slG 187 (257)
T cd05040 152 DHYVMEEHLKVPFAW-CAPESLRTRTFSHASDVWMFG 187 (257)
T ss_pred cceecccCCCCCcee-cCHHHhcccCcCchhhhHHHH
Confidence 1 00112 223344455677789999999
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.95 E-value=7.4e-27 Score=181.78 Aligned_cols=181 Identities=31% Similarity=0.515 Sum_probs=149.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|++.+.||+|++|.||+|.+..++..+++|.+..... .....+.+.+|++++++++|+|++++++.+........+++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD--SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 3677899999999999999998999999999875532 24556888999999999999999999998865433678899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+|++++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG--IVHRDIKGANILVDSD-GVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEcCC-CCEEEcccccEEecccccc
Confidence 999999999999887778999999999999999999999999 9999999999999865 5899999999988766532
Q ss_pred --------eeeecccCccccCCCccccccceeeec
Q 027788 187 --------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 --------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+. +++.......+.++|+||+|
T Consensus 157 ~~~~~~~~~~~~y~-~pE~~~~~~~~~~~Dv~slG 190 (260)
T cd06606 157 GEGTGSVRGTPYWM-APEVIRGEEYGRAADIWSLG 190 (260)
T ss_pred cccccCCCCCcccc-CHhhhcCCCCCchhhHHHHH
Confidence 111122 23333444477789999999
No 322
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.95 E-value=8.8e-28 Score=188.30 Aligned_cols=177 Identities=23% Similarity=0.429 Sum_probs=146.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||++.+..+++.+++|.+.... .....+.+.+|+++++.++|||++++++.+... +..++++
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~lv~ 78 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI---NEAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDISICM 78 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc---ChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEEEEEE
Confidence 56678999999999999999999999999987543 234557788999999999999999999988544 6788999
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|++++++|.+++... ..+++..+..++.|++.++.++|+ .+ ++|+||+|+||+++.+ +.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~--i~H~dl~~~ni~~~~~-~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK--IIHRDVKPSNILVNSR-GQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC--eecCCCCHHHEEECCC-CCEEEeecccchhhHHHH
Confidence 999999999988765 678999999999999999999999 88 9999999999999865 689999999987664332
Q ss_pred e----eeeecccCccccCCCccccccceeeec
Q 027788 186 R----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ....+..| ++.....++.++|+||+|
T Consensus 156 ~~~~~~~~~y~~P-E~~~~~~~~~~~Dv~slG 186 (265)
T cd06605 156 AKTFVGTSSYMAP-ERIQGNDYSVKSDIWSLG 186 (265)
T ss_pred hhcccCChhccCH-HHHcCCCCCchhhHHHHH
Confidence 2 22223333 344445677889999999
No 323
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=5.2e-27 Score=186.33 Aligned_cols=172 Identities=23% Similarity=0.411 Sum_probs=141.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
+.||+|++|.||++.+..+++.+++|.++.. .....+.+.+|+.+++.++|+|++++++.+.. .+..++++|++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~e~~ 98 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLR----KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVMEFL 98 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEecc----chhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEEecc
Confidence 7999999999999999999999999987643 23344668899999999999999999998854 45678899999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++++|.+++.. ..++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++........
T Consensus 99 ~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H~dl~p~Nil~~~~-~~~~l~d~g~~~~~~~~~~~~~~ 174 (285)
T cd06648 99 EGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQG--VIHRDIKSDSILLTSD-GRVKLSDFGFCAQVSKEVPRRKS 174 (285)
T ss_pred CCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChhhEEEcCC-CcEEEcccccchhhccCCccccc
Confidence 99999998876 57899999999999999999999999 9999999999999865 5899999998876543321
Q ss_pred --eeeecccCccccCCCccccccceeeec
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+| +......++.++|+||+|
T Consensus 175 ~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 202 (285)
T cd06648 175 LVGTPYWMAP-EVISRLPYGTEVDIWSLG 202 (285)
T ss_pred ccCCccccCH-HHhcCCCCCCcccHHHHH
Confidence 11122233 334445577889999999
No 324
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=7.7e-27 Score=181.58 Aligned_cols=178 Identities=28% Similarity=0.474 Sum_probs=147.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||++.+..+++.+++|.+..... .......+.+|++++++++|+|++++.+++.. .+..++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 3 QLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI--KEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred eeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc--CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 677999999999999999998999999999876542 23456789999999999999999999988854 46788999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
|++++++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG--VIHRDIKAANILTTKD-GVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCHHHEEECCC-CCEEEeccccceecCCCccc
Confidence 99999999999887778999999999999999999999999 9999999999999865 6899999999987755432
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+..|+ .......+.++|+||+|
T Consensus 156 ~~~~~~~~~y~~pe-~~~~~~~~~~~Dv~~lG 186 (254)
T cd06627 156 DASVVGTPYWMAPE-VIEMSGASTASDIWSLG 186 (254)
T ss_pred ccccccchhhcCHh-hhcCCCCCcchhHHHHH
Confidence 111222333 33333467789999999
No 325
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=194.88 Aligned_cols=194 Identities=26% Similarity=0.423 Sum_probs=157.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCC---HHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDD---PAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR 100 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~ 100 (219)
.+| .+..+||+|+|+.||+|.+....+.||+|+-.......+ ....++..+|..+.+.|+||.|++++++|.-. .
T Consensus 463 ~RY-LlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-t 540 (775)
T KOG1151|consen 463 DRY-LLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-T 540 (775)
T ss_pred HHH-HHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-c
Confidence 455 566899999999999999999999999998765443332 34557778999999999999999999999753 4
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC--CCcEEEeccccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN--TGQVKIGDLGVA 178 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~--~~~~~l~dfg~a 178 (219)
+.+|-|+|||+|.+|.-++..+..+++...+.|+.||+.+|.||....++|+|=||||.|||+-.. .|.+||.|||++
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 668889999999999999998888999999999999999999999999999999999999998522 256899999999
Q ss_pred eeccccce------ee------eecccCcc-c---cCCCccccccceeeeccccccC
Q 027788 179 AIVGRAIR------RI------RCWGRRSS-W---RRSCTMRITRSLWTYTRLGCAC 219 (219)
Q Consensus 179 ~~~~~~~~------~~------~~~~~~~~-~---~~~~~~~~~~diws~gi~~~~c 219 (219)
++...+.. .. +.|.-|++ + ...|.++.+.|+||.|+.=+.|
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQC 677 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQC 677 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhh
Confidence 99866442 11 22333332 1 2356688899999999665555
No 326
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.95 E-value=8.1e-28 Score=192.09 Aligned_cols=175 Identities=21% Similarity=0.384 Sum_probs=141.4
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.....||+|+||.||+|.+..++..||+|.++.... ...+.+.+|+.+++.++|||++++++.+.. .+..++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv~ 97 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVLM 97 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEEE
Confidence 344689999999999999988999999999875432 234667889999999999999999998854 45688899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
|++++++|..++.. ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~dl~p~Nill~~~-~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQG--VIHRDIKSDSILLTLD-GRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHeEEccC-CcEEEeechhHhhccccccc
Confidence 99999999887654 46899999999999999999999999 9999999999999866 6899999999876543322
Q ss_pred -----eeeecccCccccCCCccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.+ ++......++.++|+||+|
T Consensus 174 ~~~~~~~~~y~a-PE~~~~~~~~~~~Dv~slG 204 (297)
T cd06659 174 RKSLVGTPYWMA-PEVISRTPYGTEVDIWSLG 204 (297)
T ss_pred ccceecCccccC-HHHHccCCCCchhhHHHHH
Confidence 1112222 3444455677889999999
No 327
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.95 E-value=8.6e-28 Score=191.50 Aligned_cols=184 Identities=21% Similarity=0.391 Sum_probs=145.8
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD 97 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~ 97 (219)
...++...+.. ...||+|+||.||++.+..++..||+|.+... .....+.+.+|+.+++.++|+|++++++.+..
T Consensus 16 ~~~~~~~~~~~-~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~ 90 (292)
T cd06658 16 SPGDPREYLDS-FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLV 90 (292)
T ss_pred ccCchHHHHhh-hhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheec
Confidence 34445455543 47899999999999999889999999988643 23445678899999999999999999988843
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.+..+++||++++++|.+++.. ..+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++|+|||+
T Consensus 91 --~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nill~~~-~~~kL~dfg~ 164 (292)
T cd06658 91 --GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQG--VIHRDIKSDSILLTSD-GRIKLSDFGF 164 (292)
T ss_pred --CCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEcCC-CCEEEccCcc
Confidence 4568899999999999987754 46889999999999999999999999 9999999999999866 5899999999
Q ss_pred ceeccccce------eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+........ ++..+.+| +......++.++|+||+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Dv~slG 205 (292)
T cd06658 165 CAQVSKEVPKRKSLVGTPYWMAP-EVISRLPYGTEVDIWSLG 205 (292)
T ss_pred hhhcccccccCceeecCccccCH-HHHccCCCCchhhHHHHH
Confidence 876543322 11122233 333445567789999999
No 328
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=4.3e-27 Score=184.14 Aligned_cols=177 Identities=23% Similarity=0.380 Sum_probs=140.2
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
...+++.++||+|+||.||+|.. +++..+|+|.+..... ....+.+|+.++++++|+|++++++++.. ...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 75 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM-----SPEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPI 75 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC-----cHHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCc
Confidence 34458889999999999999985 4678899998874332 23568889999999999999999987632 347
Q ss_pred EEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 104 NFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+++||++++++|.+++... ..++......++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++++|||++...
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~--i~H~dl~p~ni~i~~~-~~~~l~dfg~~~~~ 152 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN--YIHRDLRAANILVSET-LCCKIADFGLARLI 152 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHHhEEEcCC-CCEEEccCcceeec
Confidence 8899999999999987643 35788999999999999999999999 9999999999999865 58999999999876
Q ss_pred ccccee-------eeecccCccccCCCccccccceeeec
Q 027788 182 GRAIRR-------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...... ...+.+ ++......++.++|+||+|
T Consensus 153 ~~~~~~~~~~~~~~~~y~~-pe~~~~~~~~~~~Di~slG 190 (260)
T cd05067 153 EDNEYTAREGAKFPIKWTA-PEAINYGTFTIKSDVWSFG 190 (260)
T ss_pred CCCCcccccCCcccccccC-HHHhccCCcCcccchHHHH
Confidence 532211 011222 3344455567789999999
No 329
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=5e-27 Score=191.27 Aligned_cols=184 Identities=28% Similarity=0.407 Sum_probs=143.0
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC--
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED-- 99 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~-- 99 (219)
...+| .+.+.||+|+||.||+|.+..++..||+|.++.... .....+.+.+|+.++++++|+||+++.+++....
T Consensus 15 ~~~~y-~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~ 91 (345)
T cd07877 15 VPERY-QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL 91 (345)
T ss_pred ccCce-EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch--hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence 33555 677999999999999999999999999998874321 2333466788999999999999999998875322
Q ss_pred --CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 100 --RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 100 --~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++++++++ +++|.++++. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 92 ~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIll~~~-~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNED-CELKILDFGL 166 (345)
T ss_pred cccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChHHEEEcCC-CCEEEecccc
Confidence 23467788877 6789887654 36899999999999999999999999 9999999999999865 5899999999
Q ss_pred ceeccccce---eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+........ ++..+.+|+.......++.++|+||+|
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 205 (345)
T cd07877 167 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 205 (345)
T ss_pred cccccccccccccCCCccCHHHHhCccCCCchhhHHHHH
Confidence 886543321 122233343333334567789999999
No 330
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=3.3e-28 Score=185.92 Aligned_cols=181 Identities=19% Similarity=0.225 Sum_probs=142.5
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEe--cC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWR--DE 98 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~--~~ 98 (219)
....|.-=.++||-|-.|.|-.|+++.+|+.+|+|++.- . ...++|++++=+. .||||+.+++++. ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----S----PKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----C----HHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 445553333569999999999999999999999998762 1 2345788887555 6999999999883 23
Q ss_pred CCceEEEEeccccCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcEEEec
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRH--VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQVKIGD 174 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~~l~d 174 (219)
+...+.+|||.++||.|++.++..+. +.+..+..|+.||+.|+.|||+.+ |.||||||+|+|..... ..+||+|
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n--IAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN--IAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc--hhhccCChhheeeecCCCCcceEecc
Confidence 44578899999999999999987654 999999999999999999999999 99999999999986332 3579999
Q ss_pred cccceeccccceeeeecccC----ccccCCCccccccceeeec
Q 027788 175 LGVAAIVGRAIRRIRCWGRR----SSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 175 fg~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~diws~g 213 (219)
||+|+.-.....-.+.+.+| ++......|+-..|+||+|
T Consensus 208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlg 250 (400)
T KOG0604|consen 208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLG 250 (400)
T ss_pred cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchh
Confidence 99999877544433333332 2344555588889999999
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=1.5e-27 Score=186.50 Aligned_cols=174 Identities=19% Similarity=0.335 Sum_probs=141.3
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||.|+||.||++++..+++.+++|.+...... .....+.+.+|+.++++++|+|++++++.+. ....+++++|++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~ 77 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-RKNQVDQVLTERDILSQAQSPYVVKLYYSFQ--GKKNLYLVMEYLPG 77 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-hhhHHHHHHHHHHHHHhCCCcchhHHHHhee--cCcEEEEEEecCCC
Confidence 68999999999999989999999998754332 2345677889999999999999999988774 45668899999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce------
Q 027788 113 GNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR------ 186 (219)
Q Consensus 113 g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~------ 186 (219)
++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 78 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~di~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 78 GDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG--IIHRDLKPDNILIDSN-GHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCCCHHHeEEcCC-CCEEEEecccchhcccCcccccccc
Confidence 999999887778999999999999999999999999 9999999999999866 5899999999876543311
Q ss_pred --------eeeecccCccccCCCccccccceeeec
Q 027788 187 --------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 --------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
....+.. ++.......+.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~-Pe~~~~~~~~~~~Dv~slG 188 (265)
T cd05579 155 EKEDKRIVGTPDYIA-PEVILGQGHSKTVDWWSLG 188 (265)
T ss_pred cccccCcccCccccC-HHHhcCCCCCcchhhHHHH
Confidence 1111222 2333344467789999999
No 332
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=216.97 Aligned_cols=183 Identities=22% Similarity=0.390 Sum_probs=154.5
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
.-.+....+||.|.||.||.|.+..+|+..|+|.++.... .......+..|..++..++|||+++++++-.+.+. +
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~--~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRek--v 1309 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS--DHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREK--V 1309 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc--ccccCcchHHHHHHHHhccCccccccCceeecHHH--H
Confidence 3344677899999999999999999999999999887543 34556778899999999999999999999876554 6
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++.||||.+|+|.++++..+..++.....+..|++.|+.|||.++ |+|||+||.||+++.+ |-+|..|||.|..+..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g--IVHRDIK~aNI~Ld~~-g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG--IVHRDIKPANILLDFN-GLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC--ceecCCCccceeeecC-CcEEeecccceeEecC
Confidence 779999999999999887777888888889999999999999999 9999999999999966 6899999999998866
Q ss_pred cce----------eeeecccCccccCC--Cccccccceeeec
Q 027788 184 AIR----------RIRCWGRRSSWRRS--CTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~----------~~~~~~~~~~~~~~--~~~~~~~diws~g 213 (219)
... ++..+-+|+.+..+ .+...++||||+|
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 541 55666667655433 3455679999999
No 333
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-28 Score=207.90 Aligned_cols=182 Identities=28% Similarity=0.454 Sum_probs=151.2
Q ss_pred eeeeeeeccccceEEEEEEecCCC----cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEG----IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~ 102 (219)
.+..++||+|+||+||+|.....| .+||+|++.... .+....+++.|+.++.+|+|||++++++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t---~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~--- 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT---SPKASIELLDEALRMASLDHPNLLRLLGVCMLST--- 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC---CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---
Confidence 356689999999999999765444 467777765432 4555688999999999999999999999997655
Q ss_pred EEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 103 LNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+.|+++++|.|.|.++.+.+ .++..+..+.|..||++|+.|||.++ ++||||..+|+|+..-. .+|+.|||+++.+
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr--lVHrdLaaRNVLVksP~-hvkitdfgla~ll 848 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR--LVHRDLAARNVLVKSPN-HVKITDFGLAKLL 848 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc--hhhhhhhhhheeecCCC-eEEEEecchhhcc
Confidence 67799999999999998765 47889999999999999999999999 99999999999998553 7999999999999
Q ss_pred cccceeeeecc--cCccc-----cCCCccccccceeeec--cccc
Q 027788 182 GRAIRRIRCWG--RRSSW-----RRSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 182 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~diws~g--i~~~ 217 (219)
.++...-.+.+ .|..| .+-+.|++++|+|||| ||.+
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 88776433333 24455 4688899999999999 8865
No 334
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=5.5e-27 Score=190.02 Aligned_cols=182 Identities=24% Similarity=0.296 Sum_probs=143.0
Q ss_pred eeeeeeeccccceEEEEEEecCC--CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEec--CCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEE--GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRD--EDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~--~~~~ 101 (219)
|.+.+.||+|+||.||++.+..+ +..+|+|.+..... .....+.+.+|+.+++++ +||||+++++.+.. ....
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS--KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 47789999999999999999888 89999998774322 233456778899999999 59999999876532 2334
Q ss_pred eEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 102 TLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.+++++++++ ++|.+.+.....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.+ +.++|+|||++...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivH~dlkp~Nili~~~-~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN--VLHRDLKPGNLLVNAD-CELKICDFGLARGF 155 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHeEEcCC-CCEEeCcCCCceec
Confidence 5788999886 689888877778999999999999999999999999 9999999999999865 58999999999876
Q ss_pred cccce----------eeeecccCccccCCCccccccceeeecc
Q 027788 182 GRAIR----------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 182 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
..... ++..+.+|+.......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv 198 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGC 198 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHH
Confidence 53321 1112333333333345677899999993
No 335
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=5e-27 Score=183.80 Aligned_cols=174 Identities=22% Similarity=0.377 Sum_probs=138.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+++.++||+|++|.||+|... .+..+|+|.+..... . .+.+.+|+.++++++|+|++++++.+.. ...+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~--~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv 78 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM--S---PESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYIV 78 (260)
T ss_pred hhhhheeccccCceEEEEEec-CCceeEEEEecCCCC--C---HHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEEE
Confidence 478899999999999999754 567799998875332 1 2458899999999999999999987732 336789
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
||++++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+|++++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~di~p~Nili~~~-~~~~l~dfg~~~~~~~~ 155 (260)
T cd05070 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN--YIHRDLRSANILVGDG-LVCKIADFGLARLIEDN 155 (260)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEEeCC-ceEEeCCceeeeeccCc
Confidence 9999999999988653 35889999999999999999999999 9999999999999865 58999999999876443
Q ss_pred ceee-------eecccCccccCCCccccccceeeec
Q 027788 185 IRRI-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... ..+.+| +......++.++|+||||
T Consensus 156 ~~~~~~~~~~~~~y~aP-E~~~~~~~~~~~Di~slG 190 (260)
T cd05070 156 EYTARQGAKFPIKWTAP-EAALYGRFTIKSDVWSFG 190 (260)
T ss_pred ccccccCCCCCccccCh-HHHhcCCCcchhhhHHHH
Confidence 2111 112333 333445567789999999
No 336
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-27 Score=173.26 Aligned_cols=178 Identities=21% Similarity=0.291 Sum_probs=144.2
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH-hhCCCCceEEEEEEecCCCceEEEEec
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLK-TLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~-~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
...||+|++|.|-+-++..+|...|+|.+.... ..+..++.+.|+.+.. ...+|.++.+++....+.. +++.||
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd--vwIcME 125 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD--VWICME 125 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc--EEEeHH
Confidence 357999999999999999999999999988654 2444577888998775 5578999999998876655 889999
Q ss_pred cccCCChHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 109 VCTSGNLREYR----KKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 109 ~~~~g~L~~~~----~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
.+. .+|..+- ......++..+.+++..|+.|+.+||++-+ ++|||+||.|||++.+ |++|++|||.+-.+...
T Consensus 126 ~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~-vIHRDvKPsNiLIn~~-GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS-VIHRDVKPSNILINYD-GQVKICDFGISGYLVDS 202 (282)
T ss_pred Hhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh-hhhccCCcceEEEccC-CcEEEcccccceeehhh
Confidence 995 6888763 345679999999999999999999998733 9999999999999966 79999999999988877
Q ss_pred ceeeeec-----ccCcc---ccCCCccccccceeeeccc
Q 027788 185 IRRIRCW-----GRRSS---WRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 185 ~~~~~~~-----~~~~~---~~~~~~~~~~~diws~gi~ 215 (219)
...+... -+|+. ...+..|+-+||+|||||.
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 7654322 23442 2345578999999999943
No 337
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=5.1e-28 Score=212.09 Aligned_cols=179 Identities=25% Similarity=0.423 Sum_probs=142.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe--------------
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR-------------- 96 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-------------- 96 (219)
+.||+|+||.||+++++-+|+.||||.|.... +......+.+|+.++++|+|||+++++..|.
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 47999999999999999999999999998765 4566678899999999999999999874442
Q ss_pred --------------------------------------------------------------cC----------------
Q 027788 97 --------------------------------------------------------------DE---------------- 98 (219)
Q Consensus 97 --------------------------------------------------------------~~---------------- 98 (219)
++
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence 00
Q ss_pred -------------------------CCceEEEEeccccCCChHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCee
Q 027788 99 -------------------------DRNTLNFITEVCTSGNLREYRKKHRHV-SVKALKKWSKQILKGLNYLHTHEPCVI 152 (219)
Q Consensus 99 -------------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~-~~~~~~~i~~qv~~~l~~lh~~~~~i~ 152 (219)
....+|+.||||+..++.+++..+... ..+..++++++|+.|+.|+|+.+ ++
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g--iI 719 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG--II 719 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc--ee
Confidence 014688999999987777777654333 58889999999999999999999 99
Q ss_pred eeCCCCCceEEeCCCCcEEEeccccceecc----ccc--------------------eeeeecccCccccCCC--ccccc
Q 027788 153 HRDLNCSNVFVNGNTGQVKIGDLGVAAIVG----RAI--------------------RRIRCWGRRSSWRRSC--TMRIT 206 (219)
Q Consensus 153 h~dl~~~nili~~~~~~~~l~dfg~a~~~~----~~~--------------------~~~~~~~~~~~~~~~~--~~~~~ 206 (219)
||||||.||+++.+ ..|||.|||+|.... ... .++..+.+|+-.-... .|+.|
T Consensus 720 HRDLKP~NIFLd~~-~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K 798 (1351)
T KOG1035|consen 720 HRDLKPRNIFLDSR-NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK 798 (1351)
T ss_pred eccCCcceeEEcCC-CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence 99999999999966 489999999998721 000 1444455555443444 69999
Q ss_pred cceeeeccc
Q 027788 207 RSLWTYTRL 215 (219)
Q Consensus 207 ~diws~gi~ 215 (219)
.|||||||+
T Consensus 799 iDmYSLGIV 807 (1351)
T KOG1035|consen 799 IDMYSLGIV 807 (1351)
T ss_pred hhhHHHHHH
Confidence 999999954
No 338
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=2e-27 Score=187.51 Aligned_cols=152 Identities=27% Similarity=0.472 Sum_probs=132.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|++|.||+|....++..+++|+++..... .....+.+..|++++++++ |+|++++++++ .+...+++
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~--~~~~~~~l 79 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI-KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF--QDEENLYF 79 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc-chHHHHHHHHHHHHHHhcccCCCchhHHHHh--cCCceEEE
Confidence 37789999999999999999999999999998754332 2334467888999999999 99999998887 44567889
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||++++++|.+++...+.+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++......
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~--~~H~dl~~~ni~i~~~-~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG--IIHRDLKPENILLDKD-MHIKITDFGTAKVLDPN 155 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHeEECCC-CCEEecCCccccccCCc
Confidence 9999999999999988778999999999999999999999999 9999999999999865 68999999999876543
No 339
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-28 Score=199.43 Aligned_cols=179 Identities=23% Similarity=0.456 Sum_probs=146.7
Q ss_pred eeeeccccceEEEEEEecCC--C--cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 30 NELLGSGAVKKVYRAFDQEE--G--IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
.++||.|-||.||.|++... | .-||||.-+... +++..+.|+.|..++++++||||++++++|.++. .|+
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~---t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P---~Wi 467 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC---TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP---MWI 467 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCC---ChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc---eeE
Confidence 44799999999999987433 3 357888766432 4555688999999999999999999999996544 799
Q ss_pred EeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||.++-|.|..+++.. ..++..+...++.|++.++.|||+.+ ++||||..+||++.+.. .+|++|||+++.+...
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr--fVHRDIAaRNiLVsSp~-CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR--FVHRDIAARNILVSSPQ-CVKLADFGLSRYLEDD 544 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc--hhhhhhhhhheeecCcc-eeeecccchhhhcccc
Confidence 99999999999998754 56889999999999999999999999 99999999999998775 8999999999988776
Q ss_pred ceeeeeccc-CccccCCCc-----cccccceeeec--cccc
Q 027788 185 IRRIRCWGR-RSSWRRSCT-----MRITRSLWTYT--RLGC 217 (219)
Q Consensus 185 ~~~~~~~~~-~~~~~~~~~-----~~~~~diws~g--i~~~ 217 (219)
.-.....+. |-.|+.... ++.+||+|=|| +|.+
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred chhhccccccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 654444443 556765444 56779999999 6654
No 340
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=196.55 Aligned_cols=181 Identities=26% Similarity=0.311 Sum_probs=149.0
Q ss_pred eeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH----HHHHHHHHHHHHHHhhC---CCCceEEEEEEecCCCc
Q 027788 29 YNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP----AMIERLFSEVRLLKTLA---NKNIISLHYVWRDEDRN 101 (219)
Q Consensus 29 ~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~ 101 (219)
..+.+|+|+||.|+.|.+++....|++|.+.+....-+. ..+.-+-.||.+++.|+ |+||++++++| ++++
T Consensus 565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF--Eddd 642 (772)
T KOG1152|consen 565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF--EDDD 642 (772)
T ss_pred eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee--ecCC
Confidence 348899999999999999999999999999876544322 22333557999999998 99999999999 8888
Q ss_pred eEEEEeccc-cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 102 TLNFITEVC-TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 102 ~~~lv~e~~-~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
++|++||.. ++.+|++++..++.+++.....|+.||+.|+..||+++ |+|||||-+|+.++.+ |.+||+|||.|..
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~--ivhrdikdenvivd~~-g~~klidfgsaa~ 719 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG--IVHRDIKDENVIVDSN-GFVKLIDFGSAAY 719 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC--ceecccccccEEEecC-CeEEEeeccchhh
Confidence 999999987 46699999999999999999999999999999999999 9999999999999977 6899999998876
Q ss_pred ccccc----eeeeecccCccccCCCccccc-cceeeeccc
Q 027788 181 VGRAI----RRIRCWGRRSSWRRSCTMRIT-RSLWTYTRL 215 (219)
Q Consensus 181 ~~~~~----~~~~~~~~~~~~~~~~~~~~~-~diws~gi~ 215 (219)
....- .++.-+.+| +......|-.+ .|||++||+
T Consensus 720 ~ksgpfd~f~gtv~~aap-evl~g~~y~gk~qdiwalgil 758 (772)
T KOG1152|consen 720 TKSGPFDVFVGTVDYAAP-EVLGGEKYLGKPQDIWALGIL 758 (772)
T ss_pred hcCCCcceeeeeccccch-hhhCCCccCCCcchhhhhhhe
Confidence 64322 244445554 44444455444 899999964
No 341
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-29 Score=204.96 Aligned_cols=182 Identities=20% Similarity=0.299 Sum_probs=160.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+...-||-|+||+|-+.........+|+|++++...- +..+.+++..|-.++.....|.|++++.+| .+..++|++|
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV-dtkQqeHv~sEr~Im~~~~s~fIvrLYrTf--rd~kyvYmLm 499 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV-DTKQQEHVFSERNIMMECRSDFIVRLYRTF--RDSKYVYMLM 499 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc-chhHHHHHHhHHHHHHhcCchHHHHHHHHh--ccchhhhhhH
Confidence 3446799999999999876665556899999887765 456779999999999999999999999999 5667899999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
|-|-||.|+..++..+.++..+..+++.++++|++|||+++ |++|||||+|++++.+ |.+||.|||+|+.+......
T Consensus 500 EaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~--iIYRDLKPENllLd~~-Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG--IIYRDLKPENLLLDNR-GYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred HhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC--ceeccCChhheeeccC-CceEEeehhhHHHhccCCce
Confidence 99999999999999999999999999999999999999999 9999999999999855 79999999999999998887
Q ss_pred eeecccCcc----ccCCCccccccceeeeccc
Q 027788 188 IRCWGRRSS----WRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 188 ~~~~~~~~~----~~~~~~~~~~~diws~gi~ 215 (219)
-+.+|+|+. ...+...+.+.|+|||||+
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIl 608 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGIL 608 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHH
Confidence 778888774 4557777888999999965
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=9.2e-27 Score=183.28 Aligned_cols=168 Identities=21% Similarity=0.277 Sum_probs=133.4
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecccc
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEVCT 111 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 111 (219)
+|+|+||.||.++...++..+++|.+....... .|+.....+ +|+|++++++.+..+ +.++++|||++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---------~e~~~~~~~~~h~~iv~~~~~~~~~--~~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---------IEPMVHQLMKDNPNFIKLYYSVTTL--KGHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---------hhHHHHHHhhcCCCEEEEEEEEecC--CeeEEEEEcCC
Confidence 599999999999999999999999987543211 123222222 699999999999654 46889999999
Q ss_pred CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--eee
Q 027788 112 SGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR--RIR 189 (219)
Q Consensus 112 ~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~--~~~ 189 (219)
+++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+.+.++++|||++........ ++.
T Consensus 93 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 170 (267)
T PHA03390 93 DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN--IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTL 170 (267)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCC
Confidence 9999999887778999999999999999999999999 999999999999986643799999999887654332 222
Q ss_pred ecccCccccCCCccccccceeeecc
Q 027788 190 CWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.+.+ ++......++.++|+||+|+
T Consensus 171 ~y~a-PE~~~~~~~~~~~DvwslG~ 194 (267)
T PHA03390 171 DYFS-PEKIKGHNYDVSFDWWAVGV 194 (267)
T ss_pred cccC-hhhhcCCCCCchhhHHHHHH
Confidence 2333 34445566778899999993
No 343
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.95 E-value=9.5e-27 Score=182.28 Aligned_cols=176 Identities=23% Similarity=0.353 Sum_probs=137.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+...||+|++|.||+|....+ ..+++|.+.... ...+.+.+|+.+++.++|+|++++++++.. +..+++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v 78 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-----MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIYIV 78 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-----ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcEEE
Confidence 47889999999999999986544 468999876432 123567889999999999999999887732 346789
Q ss_pred eccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
||++++++|.+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+|++++.+ +.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~--i~H~dl~~~Nill~~~-~~~~l~dfg~~~~~~~~ 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN--YIHRDLRAANILVGDN-LVCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--EeecccCcceEEEcCC-CeEEECCCccceEccCC
Confidence 9999999999988653 34789999999999999999999999 9999999999999855 58999999999766433
Q ss_pred ceee------eecccCccccCCCccccccceeeecc
Q 027788 185 IRRI------RCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 185 ~~~~------~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
.... .....+++......++.++|+||+|+
T Consensus 156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~ 191 (260)
T cd05069 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 191 (260)
T ss_pred cccccCCCccchhhCCHHHhccCCcChHHHHHHHHH
Confidence 2110 01112223444455677899999993
No 344
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=4.3e-27 Score=183.51 Aligned_cols=180 Identities=21% Similarity=0.379 Sum_probs=144.4
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|+||.||++....++..+|+|.+..... .....+.+.+|+.+++.++|+|++++++.+. .....+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~--~~~~~~lv 77 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM--PVKEKEASKKEVILLAKMKHPNIVTFFASFQ--ENGRLFIV 77 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc--cchhhHHHHHHHHHHHhCCCCChhhhhheec--cCCeEEEE
Confidence 3677899999999999999999999999999876432 2233466788999999999999999999884 45678899
Q ss_pred eccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 107 TEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+||+++++|.+++.... .+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+...++++|||.+......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK--ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999999999876543 4789999999999999999999999 9999999999999866445799999998876543
Q ss_pred cee------eeecccCccccCCCccccccceeeec
Q 027788 185 IRR------IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 185 ~~~------~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... +..+.+| ++.....++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~ap-e~~~~~~~~~~~Dv~slG 189 (257)
T cd08225 156 MELAYTCVGTPYYLSP-EICQNRPYNNKTDIWSLG 189 (257)
T ss_pred cccccccCCCccccCH-HHHcCCCCCchhhHHHHH
Confidence 321 1112222 334444567789999999
No 345
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=3e-28 Score=187.73 Aligned_cols=175 Identities=25% Similarity=0.350 Sum_probs=141.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.||+|+|+.|-.|....++.++|||++.+. ......++.+|++++...+ |+||+.++++| ++...+|+|+|-
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq----~gHsR~RvfREVe~f~~Cqgh~nilqLiefF--Edd~~FYLVfEK 157 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ----PGHSRSRVFREVETFYQCQGHKNILQLIEFF--EDDTRFYLVFEK 157 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC----CchHHHHHHHHHHHHHHhcCCccHHHHHHHh--cccceEEEEEec
Confidence 3599999999999999999999999999865 3556788999999998875 99999999999 666779999999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcEEEeccccceecccccee
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~~l~dfg~a~~~~~~~~~ 187 (219)
+.||+|-+.+.....+++....+++..|+.||.+||.++ |.||||||+|||-..-. .-+||+||.+...+.....-
T Consensus 158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg--IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG--IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC--cccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 999999999998889999999999999999999999999 99999999999975222 24799999887654322210
Q ss_pred --------eeecccCccc----------cCCCccccccceeeecc
Q 027788 188 --------IRCWGRRSSW----------RRSCTMRITRSLWTYTR 214 (219)
Q Consensus 188 --------~~~~~~~~~~----------~~~~~~~~~~diws~gi 214 (219)
.+.+|+- ++ -.+.-|+-+.|.||||+
T Consensus 236 spastP~L~tPvGSA-EfMAPEVVd~fv~qA~~YDKrCDlwSLGv 279 (463)
T KOG0607|consen 236 SPASTPELLTPVGSA-EFMAPEVVDVFVDQATFYDKRCDLWSLGV 279 (463)
T ss_pred CCCCCccccCcccch-hhcchhHHhhhccccccccccccHHHHHH
Confidence 1111211 11 12444777799999993
No 346
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=1.3e-26 Score=183.96 Aligned_cols=183 Identities=26% Similarity=0.460 Sum_probs=149.8
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
..++...| ...+.||+|++|.||++.+..++..+++|.++... . ..+.+.+|++.++.++|+|++++++.+..+
T Consensus 14 ~~~~~~~~-~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 14 EGDPRELY-KNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK----Q-NKELIINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred CCCccccc-hHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCc----h-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 34455555 67789999999999999998889999999987542 1 456788999999999999999999988654
Q ss_pred CCceEEEEeccccCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHR-HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++++||+++++|.+++.... .++...+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g--i~H~dl~p~ni~i~~~-~~~~l~d~~~ 162 (286)
T cd06614 88 --DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN--VIHRDIKSDNILLSKD-GSVKLADFGF 162 (286)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCChhhEEEcCC-CCEEECccch
Confidence 56888999999999999988765 7999999999999999999999999 9999999999999865 5899999998
Q ss_pred ceeccccce------eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+........ +...+. +++......++.++|+||+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~-~PE~~~~~~~~~~~Dv~slG 203 (286)
T cd06614 163 AAQLTKEKSKRNSVVGTPYWM-APEVIKRKDYGPKVDIWSLG 203 (286)
T ss_pred hhhhccchhhhccccCCcccC-CHhHhcCCCCCCccccHHHH
Confidence 876654321 111222 33444555678889999999
No 347
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=1.4e-26 Score=187.39 Aligned_cols=183 Identities=30% Similarity=0.436 Sum_probs=144.2
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
...+| .+.+.||.|+||.||+|.+..++..+|+|.+..... .....+.+..|+++++.++|||++++.+++... ..
T Consensus 8 ~~~~y-~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~ 83 (328)
T cd07856 8 ITNRY-VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS--TPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LE 83 (328)
T ss_pred cccce-EEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc--ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CC
Confidence 44555 778999999999999999999999999998764332 233446788899999999999999999988543 34
Q ss_pred eEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 102 TLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
..++++|++. ++|..+++. ..++...+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++|+|||.+...
T Consensus 84 ~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~--iiH~dl~p~Nili~~~-~~~~l~dfg~~~~~ 158 (328)
T cd07856 84 DIYFVTELLG-TDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG--VVHRDLKPSNILINEN-CDLKICDFGLARIQ 158 (328)
T ss_pred cEEEEeehhc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEeECCC-CCEEeCcccccccc
Confidence 5778999984 688877654 35788888899999999999999999 9999999999999855 68999999999765
Q ss_pred cccce---eeeecccCccccCCCccccccceeeec
Q 027788 182 GRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..... .+..+..|+.......++.++|+||+|
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG 193 (328)
T cd07856 159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAG 193 (328)
T ss_pred CCCcCCCcccccccCceeeeccCCcCcHHHHHHHH
Confidence 43321 122234444333335677789999999
No 348
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=3.6e-27 Score=190.81 Aligned_cols=181 Identities=30% Similarity=0.400 Sum_probs=147.3
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC---CceE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED---RNTL 103 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~---~~~~ 103 (219)
|++.+.||+|++|.||+|.+..++..+++|.+..... +....+.+.+|+.+++.++|+|++++.+++...+ ...+
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc--cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788999999999999999988899999999875432 2444577889999999999999999998885543 2367
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++||+++ ++|.+++.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g--i~H~dlkp~nili~~~-~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN--VIHRDLKPSNILVNSN-CDLKICDFGLARGVDP 155 (330)
T ss_pred EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEcccCceEeecc
Confidence 89999997 588888877678999999999999999999999999 9999999999999966 6899999999998765
Q ss_pred cce---------eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... .+..+.+|+.......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG 194 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVG 194 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHH
Confidence 531 111233343333333677789999999
No 349
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-27 Score=190.38 Aligned_cols=191 Identities=23% Similarity=0.340 Sum_probs=144.2
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH--hhCCCCceEEEEEE
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLK--TLANKNIISLHYVW 95 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~--~l~~~~i~~~~~~~ 95 (219)
.-.....+...+.+.||+|.||.||+|... |+.||||++... ++ ..+.+|.++++ .|+|+||+.+++.-
T Consensus 204 LVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr----dE---~SWfrEtEIYqTvmLRHENILgFIaaD 274 (513)
T KOG2052|consen 204 LVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR----DE---RSWFRETEIYQTVMLRHENILGFIAAD 274 (513)
T ss_pred HhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc----ch---hhhhhHHHHHHHHHhccchhhhhhhcc
Confidence 333455677789999999999999999774 889999998744 22 34667888886 77999999886543
Q ss_pred ecCCC--ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCeeeeCCCCCceEEeCCC
Q 027788 96 RDEDR--NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH------EPCVIHRDLNCSNVFVNGNT 167 (219)
Q Consensus 96 ~~~~~--~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~------~~~i~h~dl~~~nili~~~~ 167 (219)
...+. .-+||+++|.+.|||.++++. ..++.+...+++..++.||++||.. .|.|.|||||..|||+.++
T Consensus 275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn- 352 (513)
T KOG2052|consen 275 NKDNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN- 352 (513)
T ss_pred ccCCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC-
Confidence 22211 248999999999999999987 4799999999999999999999974 2569999999999999866
Q ss_pred CcEEEeccccceeccccce-----eeeecc-----cCccccC----CCcccc-ccceeeec--cccccC
Q 027788 168 GQVKIGDLGVAAIVGRAIR-----RIRCWG-----RRSSWRR----SCTMRI-TRSLWTYT--RLGCAC 219 (219)
Q Consensus 168 ~~~~l~dfg~a~~~~~~~~-----~~~~~~-----~~~~~~~----~~~~~~-~~diws~g--i~~~~c 219 (219)
+.+-|+|+|+|...+.+-. .+..+| +|+-.-. ..--+. .+|||||| .|.++|
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 6899999999998877632 222233 3332111 111122 28999999 888764
No 350
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=1.5e-26 Score=184.58 Aligned_cols=191 Identities=17% Similarity=0.125 Sum_probs=133.3
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCC---CcEEEEEEeeecccCCCHHH-------HHHHHHHHHHHHhhCCCCc
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEE---GIEVAWNQVKLRTFCDDPAM-------IERLFSEVRLLKTLANKNI 88 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~-------~~~~~~E~~~l~~l~~~~i 88 (219)
..+..++.|++.++||+|+||.||+|....+ +..+++|............. ......+...++.++|+++
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 4455666679999999999999999998776 66777776443321100000 0111223344566789999
Q ss_pred eEEEEEEecCCC--ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 89 ISLHYVWRDEDR--NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 89 ~~~~~~~~~~~~--~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
+++++.+..... .+.+++++++. .++.+.+......++..+..++.|++.|+.|||+.+ ++||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG--ISHGDIKPENIMVDGN 162 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC
Confidence 999887654432 24467788774 466666665555678889999999999999999999 9999999999999865
Q ss_pred CCcEEEeccccceeccccce-------------eeeecccCccccCCCccccccceeeecc
Q 027788 167 TGQVKIGDLGVAAIVGRAIR-------------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+.++|+|||+|+.+..... ++..+ .+++......++.++|+||+|+
T Consensus 163 -~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y-~ape~~~~~~~~~~~DiwSlG~ 221 (294)
T PHA02882 163 -NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY-AGLDAHNGACVTRRGDLESLGY 221 (294)
T ss_pred -CcEEEEEcCCceeeccCCcccccccccccccCCCccc-cCHHHhCCCCCCcHHHHHHHHH
Confidence 5899999999987643211 11111 2223344566788899999993
No 351
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=6.7e-27 Score=189.25 Aligned_cols=176 Identities=22% Similarity=0.304 Sum_probs=137.8
Q ss_pred eeeccc--cceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSG--AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g--~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
..||+| +||.||.|.+..+++.||+|.+..... .....+.+.+|+.+++.++||||+++++++.. ...+++++|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~~v~e 79 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC--TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLWVISP 79 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceEEEEe
Confidence 457776 999999999999999999999875432 34456788999999999999999999999955 456888999
Q ss_pred cccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 109 VCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 109 ~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
+++++++.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.+ +.+++.||+.+........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivHrDlkp~Nill~~~-~~~~~~~~~~~~~~~~~~~ 156 (328)
T cd08226 80 FMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG--YIHRNIKASHILISGD-GLVSLSGLSHLYSLVRNGQ 156 (328)
T ss_pred cccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEeCC-CcEEEechHHHhhhhccCc
Confidence 99999999987653 35889999999999999999999999 9999999999999865 5899999975543322111
Q ss_pred -------------eeeecccCccccCC-Cccccccceeeec
Q 027788 187 -------------RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 187 -------------~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
....+.+|+..... ..++.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (328)
T cd08226 157 KAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG 197 (328)
T ss_pred cccccccccccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence 01113344333322 3466789999999
No 352
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=4.6e-27 Score=184.72 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=136.1
Q ss_pred eeeccccceEEEEEEecCCC------cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEG------IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
+.||+|+||.||+|...... ..+++|.+.... .......+.+|+.+++.++||||+++++++.. ....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA---TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc---chhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CCCeE
Confidence 36899999999999876443 679999876432 22345678899999999999999999998844 45578
Q ss_pred EEeccccCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC----CcEEEe
Q 027788 105 FITEVCTSGNLREYRKKH-------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT----GQVKIG 173 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~-------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~----~~~~l~ 173 (219)
++||++++++|.+++... ..+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+. ..++++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~H~dl~p~nil~~~~~~~~~~~~~l~ 153 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH--FIHRDLAARNCLVSEKGYDADRVVKIG 153 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC--cccCCCChheEEEecCCCCCCcceEEC
Confidence 899999999999987642 23678899999999999999999999 99999999999998542 168999
Q ss_pred ccccceecccccee----e---eecccCccccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIRR----I---RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|||++......... . .....+++......++.++|+||||
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 200 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG 200 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHH
Confidence 99999765432210 0 1112233444556678889999999
No 353
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=4.2e-27 Score=200.23 Aligned_cols=181 Identities=20% Similarity=0.270 Sum_probs=129.5
Q ss_pred eeeeeeeeccccceEEEEEEecCCC-cEEEEEEee-------------ecccCCCHHHHHHHHHHHHHHHhhCCCCceEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEG-IEVAWNQVK-------------LRTFCDDPAMIERLFSEVRLLKTLANKNIISL 91 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~-~~vavK~~~-------------~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 91 (219)
.|++.+.||+|+||.||+|...... ...+.|.++ .+...........+.+|+.++++++|+||+++
T Consensus 149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 228 (501)
T PHA03210 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKI 228 (501)
T ss_pred ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcE
Confidence 3488899999999999998754322 112222110 01111123345667899999999999999999
Q ss_pred EEEEecCCCceEEEEeccccCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 92 HYVWRDEDRNTLNFITEVCTSGNLREYRKKH-----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 92 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
++++..+ +..+++++++. ++|..++... .......+..++.|++.||.|||+++ ++||||||+||+++.+
T Consensus 229 ~~~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g--IiHrDLKP~NILl~~~ 303 (501)
T PHA03210 229 EEILRSE--ANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK--LIHRDIKLENIFLNCD 303 (501)
T ss_pred eEEEEEC--CeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCC
Confidence 9998654 45778999985 5666655322 22345677889999999999999999 9999999999999865
Q ss_pred CCcEEEeccccceeccccce-------eeeecccCccccCCCccccccceeeec
Q 027788 167 TGQVKIGDLGVAAIVGRAIR-------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+.+||+|||++..+..... ++..+.+| +......++.++||||+|
T Consensus 304 -~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aP-E~~~~~~~~~~~DiwSlG 355 (501)
T PHA03210 304 -GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSP-EILAGDGYCEITDIWSCG 355 (501)
T ss_pred -CCEEEEeCCCceecCcccccccccccCCcCCCCc-hhhcCCCCCcHHHHHHHH
Confidence 6899999999987654322 22223333 344456678889999999
No 354
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=1.9e-26 Score=179.96 Aligned_cols=175 Identities=22% Similarity=0.352 Sum_probs=139.0
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.+.+.||+|+||.||+|.+. ++..+|+|.+..... ....+..|++++++++|||++++++++.. ....+++
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v 77 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-----SEEDFIEEAQVMMKLSHPKLVQLYGVCTE--RSPICLV 77 (256)
T ss_pred eEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-----CHHHHHHHHHHHHhCCCCCeeeEEEEEcc--CCceEEE
Confidence 367799999999999999875 467899998764322 12457789999999999999999998844 4567889
Q ss_pred eccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 107 TEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+|++++++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+|++++.+ +.++|+|||++.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~dl~p~ni~i~~~-~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN--VIHRDLAARNCLVGEN-QVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccccceEEEcCC-CeEEECCCcceeecccCc
Confidence 9999999999988654 45889999999999999999999999 9999999999999855 589999999998664432
Q ss_pred eee-------eecccCccccCCCccccccceeeec
Q 027788 186 RRI-------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 ~~~-------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ..+.+ ++......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~a-Pe~~~~~~~~~~~Dv~slG 188 (256)
T cd05112 155 YTSSTGTKFPVKWSS-PEVFSFSKYSSKSDVWSFG 188 (256)
T ss_pred ccccCCCccchhhcC-HhHhccCCcChHHHHHHHH
Confidence 110 11222 3344455677789999999
No 355
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=1.1e-26 Score=181.06 Aligned_cols=179 Identities=24% Similarity=0.400 Sum_probs=145.6
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
|.+.+.||+|++|.||++.+..++..+++|.+..... .......+..|+.+++.++|+|++++.+++.. ....+++
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v 77 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM--SQKEREDAVNEIRILASVNHPNIISYKEAFLD--GNKLCIV 77 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc--cHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CCEEEEE
Confidence 3677899999999999999999999999999875432 23445677889999999999999999988854 3668889
Q ss_pred eccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 107 TEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|++++++|..++.. ...+++..+..++.|++.|+.+||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~--i~h~~l~~~ni~~~~~-~~~kl~d~g~~~~~~ 154 (256)
T cd08530 78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK--ILHRDLKSANILLVAN-DLVKIGDLGISKVLK 154 (256)
T ss_pred ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC--cccCCCCcceEEEecC-CcEEEeeccchhhhc
Confidence 999999999988755 346889999999999999999999999 9999999999999865 689999999998775
Q ss_pred ccce----eeeecccCccccCCCccccccceeeec
Q 027788 183 RAIR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.... +...+. ++++.....++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~-~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 155 KNMAKTQIGTPHYM-APEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred cCCcccccCCcccc-CHHHHCCCCCCchhhHHHHH
Confidence 5422 111222 23344455677789999999
No 356
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.94 E-value=3.4e-26 Score=184.03 Aligned_cols=187 Identities=22% Similarity=0.351 Sum_probs=145.0
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
..++...+ ...+.||+|+||.||+|.+..++..+++|.+...... .......+..|+.+++.++|||++++.+++..
T Consensus 16 ~~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 92 (313)
T cd06633 16 KDDPEEIF-VGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK- 92 (313)
T ss_pred cCCHHHHh-hcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-chHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-
Confidence 33444444 5557899999999999999999999999998754332 33445678889999999999999999999854
Q ss_pred CCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.+..+++|||++ +++.+++.. ...+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 93 -~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g--i~H~dl~p~nili~~~-~~~kL~dfg~ 167 (313)
T cd06633 93 -EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--MIHRDIKAGNILLTEP-GQVKLADFGS 167 (313)
T ss_pred -CCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChhhEEECCC-CCEEEeecCC
Confidence 456889999996 567666543 456889999999999999999999999 9999999999999855 5899999999
Q ss_pred ceeccccce--eeeecccCcccc--CCCccccccceeeec
Q 027788 178 AAIVGRAIR--RIRCWGRRSSWR--RSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~diws~g 213 (219)
+........ ++..+.+|+.+. ....++.++|+||+|
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slG 207 (313)
T cd06633 168 ASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 207 (313)
T ss_pred CcccCCCCCccccccccChhhccccCCCCCCchhhHHHHH
Confidence 875433221 222334444432 245577789999999
No 357
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.94 E-value=1.2e-26 Score=186.22 Aligned_cols=189 Identities=24% Similarity=0.392 Sum_probs=145.7
Q ss_pred ccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEe
Q 027788 17 FIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 17 ~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
.....+...| ...+.||+|++|.||+|.+..++..+++|.+...... .......+.+|+++++.++|+|++++.+++.
T Consensus 8 ~~~~~~~~~~-~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 85 (308)
T cd06634 8 FFKDDPEKLF-SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85 (308)
T ss_pred hhcCCcHHHH-HHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence 3344444444 5668899999999999999999999999988643222 3344567888999999999999999999885
Q ss_pred cCCCceEEEEeccccCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRK-KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
. .+..++++||+. +++.+.+. ....+++..+..++.|++.++.|||+.+ ++|+||+|+||+++.+ +.++++||
T Consensus 86 ~--~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~--i~H~dl~p~nil~~~~-~~~kl~df 159 (308)
T cd06634 86 R--EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEP-GLVKLGDF 159 (308)
T ss_pred c--CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHhEEECCC-CcEEECCc
Confidence 4 456788999997 57766654 3446889999999999999999999999 9999999999999865 58999999
Q ss_pred ccceeccccce--eeeecccCcccc--CCCccccccceeeec
Q 027788 176 GVAAIVGRAIR--RIRCWGRRSSWR--RSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~diws~g 213 (219)
|++........ ++..+.+|+... ....++.++|+||+|
T Consensus 160 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG 201 (308)
T cd06634 160 GSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201 (308)
T ss_pred ccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHH
Confidence 99887654322 222233343332 234567789999999
No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.94 E-value=1.1e-26 Score=184.55 Aligned_cols=182 Identities=19% Similarity=0.292 Sum_probs=142.3
Q ss_pred eeeeeeeccccceEEEEEEec---CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCce
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ---EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNT 102 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~ 102 (219)
|++.+.||+|++|.||++... .++..+|+|.++...........+.+.+|+.+++.+ +|+|++++.+.+. ....
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~--~~~~ 79 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ--TDTK 79 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee--cCCE
Confidence 367789999999999998753 467889999987543322344456788999999999 5999999998884 4456
Q ss_pred EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 103 LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 103 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
++++|||+++++|.+.+.....+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--~~H~dl~p~nil~~~~-~~~~l~dfg~~~~~~ 156 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG--IIYRDIKLENILLDSE-GHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHeEECCC-CCEEEEECccccccc
Confidence 8899999999999998876667899999999999999999999999 9999999999999865 589999999987754
Q ss_pred ccce-------eeeecccCccccCC-Cccccccceeeec
Q 027788 183 RAIR-------RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~-------~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
.... +...+.+|+..... +..+.++|+||+|
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (288)
T cd05583 157 AEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195 (288)
T ss_pred cccccccccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence 4321 11122233322221 2356679999999
No 359
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.2e-28 Score=199.26 Aligned_cols=178 Identities=26% Similarity=0.427 Sum_probs=148.5
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEecc
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
..+||-|.||.||.|+.++-...||||-++. +...+++|++|..+++.+.|||+++++++|..+.. +|+++||
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKE-----DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP--FYIiTEf 344 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP--FYIITEF 344 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhh-----cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC--eEEEEec
Confidence 3579999999999999999889999998884 45667999999999999999999999999976654 7889999
Q ss_pred ccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 110 CTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 110 ~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
|..|+|-++++.+. -++.-..+.++.||.+++.||..++ ++||||..+|+|+..+. .+|++|||+++.+..+- .
T Consensus 345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn--FIHRDLAARNCLVgEnh-iVKvADFGLsRlMtgDT-Y 420 (1157)
T KOG4278|consen 345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENH-IVKVADFGLSRLMTGDT-Y 420 (1157)
T ss_pred ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhccccccc-eEEeeccchhhhhcCCc-e
Confidence 99999999987653 3667778889999999999999999 99999999999998664 78999999999887653 4
Q ss_pred eeecccC--ccccCC-----Cccccccceeeec--ccccc
Q 027788 188 IRCWGRR--SSWRRS-----CTMRITRSLWTYT--RLGCA 218 (219)
Q Consensus 188 ~~~~~~~--~~~~~~-----~~~~~~~diws~g--i~~~~ 218 (219)
+...|+. ..|... ..++.++|+|+|| .|.|+
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIA 460 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 460 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHH
Confidence 4445542 234332 2356789999999 78765
No 360
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.6e-29 Score=188.45 Aligned_cols=180 Identities=24% Similarity=0.390 Sum_probs=148.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc---eEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN---TLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~---~~~lv~ 107 (219)
+-||.|+||.||..++.++|+.||+|.+.... .....-+++.+|+..+..++|.|++..++..+-...+ .+|+++
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf--q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF--QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHH--HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 57999999999999999999999999766332 2445568899999999999999999988777544433 246788
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR 187 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~ 187 (219)
|.+. .+|.+.+-+-..++.+.+.-+++||+.|+.|||+.+ |+||||||-|++++++. .+||+|||+++....+...
T Consensus 137 ELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~--ILHRDIKPGNLLVNSNC-vLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN--ILHRDIKPGNLLVNSNC-ILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc--hhhccCCCccEEeccCc-eEEecccccccccchhhhh
Confidence 8884 688877766667999999999999999999999999 99999999999999875 6899999999987666542
Q ss_pred e-------eecccCccccCCCccccccceeeec-ccc
Q 027788 188 I-------RCWGRRSSWRRSCTMRITRSLWTYT-RLG 216 (219)
Q Consensus 188 ~-------~~~~~~~~~~~~~~~~~~~diws~g-i~~ 216 (219)
. ..+++|+-.+.++-|+..-||||.| |++
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFa 249 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFA 249 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHH
Confidence 2 2456677777888899999999999 654
No 361
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.94 E-value=5.3e-26 Score=176.26 Aligned_cols=177 Identities=25% Similarity=0.456 Sum_probs=145.7
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||++.+..++..+++|.+.... ....+.+.+|++.++.++|++++++.+.+... ...++++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l~~ 76 (253)
T cd05122 3 EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLES----KEKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIVM 76 (253)
T ss_pred eeeeeeccCCceEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEEE
Confidence 56789999999999999998899999999987543 23557888999999999999999999988544 5578899
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|++++++|.+++... ..+++..+..++.|++.++.+||..+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--i~h~dl~p~ni~i~~~-~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--IIHRDIKAANILLTSD-GEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC--EecCCCCHHHEEEccC-CeEEEeecccccccccccc
Confidence 999999999988765 57899999999999999999999999 9999999999999865 6899999999988765431
Q ss_pred ----eeeecccCccccCCCccccccceeeec
Q 027788 187 ----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.......+++......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG 184 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLG 184 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHH
Confidence 111111233344444567789999999
No 362
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=199.19 Aligned_cols=181 Identities=23% Similarity=0.348 Sum_probs=148.4
Q ss_pred eeeeeeccccceEEEEEEecCC---CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEE---GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 104 (219)
++-++||+|.||.|++|..... ...||||.+..... ......|++|+.++.+|+|+|++++|++..+.. +.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l---~~~mddflrEas~M~~L~H~hliRLyGvVl~qp---~m 186 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL---NAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP---AM 186 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc---chhHHHHHHHHHHHHhccCcceeEEeeeeccch---hh
Confidence 5558999999999999976543 34699999886653 225688999999999999999999999997533 67
Q ss_pred EEeccccCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 105 FITEVCTSGNLREYRKK--HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|+|.++.|+|-+.+.+ ...+-......++.||+.|+.||..++ ++||||..+|+++.... .+||+|||+.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr--lvHRDLAARNlllaspr-tVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR--LVHRDLAARNLLLASPR-TVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh--hhhhhhhhhhheecccc-eeeeecccceeccC
Confidence 89999999999998876 345778889999999999999999999 99999999999998664 79999999999997
Q ss_pred ccce-e--------eeecccCccccCCCccccccceeeec--ccccc
Q 027788 183 RAIR-R--------IRCWGRRSSWRRSCTMRITRSLWTYT--RLGCA 218 (219)
Q Consensus 183 ~~~~-~--------~~~~~~~~~~~~~~~~~~~~diws~g--i~~~~ 218 (219)
..+. . ..+|++| +-.+.+.++.+||+|++| ||.+.
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaP-EsLrh~kFShaSDvWmyGVTiWEMF 309 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAP-ESLRHRKFSHASDVWMYGVTIWEMF 309 (1039)
T ss_pred CCCcceEecCCCcCcccccCH-hHhccccccccchhhhhhhhHHhhh
Confidence 7664 1 1134433 224567788899999999 88763
No 363
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94 E-value=1.4e-26 Score=183.29 Aligned_cols=178 Identities=29% Similarity=0.414 Sum_probs=142.1
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|++|.||+|....+++.+++|.+...... .......+|+..+++++ |+|++++++.+.. ....++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc---hhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEE
Confidence 36778999999999999999888999999988754321 11233456899999999 9999999988844 566889
Q ss_pred EeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 106 ITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+||++ +++|.+.+.... .+++..+..++.|++.++.|||+++ ++|+||+|+||+++.+ +.++|+|||++.....
T Consensus 76 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~--i~H~dl~~~ni~i~~~-~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG--FFHRDLKPENLLVSGP-EVVKIADFGLAREIRS 151 (283)
T ss_pred EEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCC-CCEEEeecccceeccC
Confidence 99999 678888776543 6899999999999999999999999 9999999999999865 5899999999987654
Q ss_pred cce-----eeeecccCccccCCCccccccceeeec
Q 027788 184 AIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
... ++..+.+|+.......++.++|+||+|
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G 186 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALG 186 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHH
Confidence 322 122233444444555567789999999
No 364
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94 E-value=7.2e-26 Score=179.32 Aligned_cols=180 Identities=27% Similarity=0.407 Sum_probs=140.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh---CCCCceEEEEEEecCCC---
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL---ANKNIISLHYVWRDEDR--- 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l---~~~~i~~~~~~~~~~~~--- 100 (219)
|++.+.||+|+||.||+|.+..++..+|+|.++.... .......+.+|+.+++++ +|+|++++++.+...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS--EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc--cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 3677899999999999999988899999999875543 223335566788877766 59999999999865432
Q ss_pred ceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
..++++||+++ ++|.+++... ..+++..+..++.|++.|+.+||+.+ ++|+||+|+|++++.+ +.++|+|||++
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~--i~h~~l~~~nili~~~-~~~~l~dfg~~ 154 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR--IVHRDLKPQNILVTSD-GQVKIADFGLA 154 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhEEEccC-CCEEEeccCcc
Confidence 24788999997 5788877653 35899999999999999999999999 9999999999999976 68999999999
Q ss_pred eecccccee-----eeecccCccccCCCccccccceeeec
Q 027788 179 AIVGRAIRR-----IRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 179 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
......... ...+.+| +......++.++|+||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~P-E~~~~~~~~~~~Di~s~G 193 (287)
T cd07838 155 RIYSFEMALTSVVVTLWYRAP-EVLLQSSYATPVDMWSVG 193 (287)
T ss_pred eeccCCcccccccccccccCh-HHhccCCCCCcchhhhHH
Confidence 887544321 1112233 334445567789999999
No 365
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=190.80 Aligned_cols=186 Identities=19% Similarity=0.292 Sum_probs=153.1
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
.+.++++.-+.||+|+||.|+-|.-..+|+-+|.|.+.++..... ..-...++|-.++.+++.+.|+.+-..| +.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr-~ge~maLnEk~iL~kV~s~FiVslaYAf--eTkd 258 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKR-KGETMALNEKQILEKVSSPFIVSLAYAF--ETKD 258 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHh-hhhHHhhHHHHHHHHhccCcEEEEeeee--cCCC
Confidence 345666777899999999999999999999999999876543221 1224567899999999999999998777 6667
Q ss_pred eEEEEeccccCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 102 TLNFITEVCTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
.+++|+..|+||+|.-++...+ .+++....+++.+|+.||+.||+.+ |++|||||+|||+| +.|++.|+|+|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~--iVYRDLKPeNILLD-d~GhvRISDLGLAv 335 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR--IVYRDLKPENILLD-DHGHVRISDLGLAV 335 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc--eeeccCChhheeec-cCCCeEeeccceEE
Confidence 7999999999999998776554 7999999999999999999999999 99999999999999 55899999999999
Q ss_pred eccccceeeeecccCc----cccCCCccccccceeeec
Q 027788 180 IVGRAIRRIRCWGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 180 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~diws~g 213 (219)
.++....-...+|+.. +...+..|+.+.|-||||
T Consensus 336 ei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lG 373 (591)
T KOG0986|consen 336 EIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLG 373 (591)
T ss_pred ecCCCCccccccCcccccCHHHHcCCcccCCccHHHHH
Confidence 9877654333234322 334455599999999999
No 366
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.94 E-value=2.3e-26 Score=183.27 Aligned_cols=172 Identities=23% Similarity=0.386 Sum_probs=140.3
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVC 110 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 110 (219)
..||+|+||.||++....++..+|+|.+... .......+.+|+.+++.++|+|++++++.+.. .+..+++|||+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~ 99 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVMEFL 99 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEeccc----chhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEecC
Confidence 6799999999999999999999999987543 23345678899999999999999999998854 45688899999
Q ss_pred cCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce----
Q 027788 111 TSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---- 186 (219)
Q Consensus 111 ~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---- 186 (219)
++++|.+++. ...+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++++|||++........
T Consensus 100 ~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~g--ivH~dl~p~Nilv~~~-~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 100 EGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQG--VIHRDIKSDSILLTHD-GRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred CCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEECCC-CCEEEcccccceecccccccccc
Confidence 9999988764 346889999999999999999999999 9999999999999866 5899999999876654322
Q ss_pred --eeeecccCccccCCCccccccceeeec
Q 027788 187 --RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 --~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++..+.. +++.....++.++|+||+|
T Consensus 176 ~~~~~~y~~-pE~~~~~~~~~~~Dv~slG 203 (292)
T cd06657 176 LVGTPYWMA-PELISRLPYGPEVDIWSLG 203 (292)
T ss_pred cccCccccC-HHHhcCCCCCchhhHHHHH
Confidence 1111223 3344455567789999999
No 367
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.94 E-value=2.4e-26 Score=178.58 Aligned_cols=174 Identities=21% Similarity=0.332 Sum_probs=143.0
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|++|.||++.+..+++.+++|.+..... ........+..|+.++++++|+|++++++.+ +.....+++||++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~~v~e~~~~ 77 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI-IKRKEVEHTLTERNILSRINHPFIVKLHYAF--QTEEKLYLVLEYAPG 77 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh-cchHHHHHHHHHHHHHHHcCCCcHHHHHHHe--ecCCeeEEEEecCCC
Confidence 6899999999999988899999999876543 2334567889999999999999999998887 455678899999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc------e
Q 027788 113 GNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI------R 186 (219)
Q Consensus 113 g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~------~ 186 (219)
++|.+++.....+++..+..++.|++.++.++|..+ ++|+||+|+||+++.+ +.++++|||++....... .
T Consensus 78 ~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~--~~H~~l~p~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 78 GELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLG--IIYRDLKPENILLDAD-GHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcceEEEcCC-CcEEEeecCcceecccCCCcccCCc
Confidence 999999887777899999999999999999999999 9999999999999865 589999999998765431 1
Q ss_pred eeeecccCccccCCCccccccceeeec
Q 027788 187 RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
+...+.+|+ .......+.++|+||+|
T Consensus 155 ~~~~~~~Pe-~~~~~~~~~~~D~~slG 180 (250)
T cd05123 155 GTPEYLAPE-VLLGKGYGKAVDWWSLG 180 (250)
T ss_pred CCccccChH-HhCCCCCCchhhHHHHH
Confidence 222233333 33334456679999999
No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=3.8e-26 Score=185.88 Aligned_cols=183 Identities=25% Similarity=0.352 Sum_probs=141.2
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC--
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR-- 100 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~-- 100 (219)
..+| .+.+.||+|+||.||+|.+..+++.||+|.++.... .......+.+|+.+++.++|+||+++++++.....
T Consensus 14 ~~~y-~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 14 PERY-TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred ccce-EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc--cccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 3555 677999999999999999999999999998874322 22334567889999999999999999988754322
Q ss_pred --ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 101 --NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 101 --~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
..+++++|++. .+|...+. ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++|+|||++
T Consensus 91 ~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--i~H~dlkp~NIll~~~-~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQ-TDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG--IIHRDLKPGNLAVNED-CELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccc-cCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCC-CCEEEeeCCCC
Confidence 34688999986 46766542 36889999999999999999999999 9999999999999866 68999999999
Q ss_pred eeccccce---eeeecccCccccCCCccccccceeeecc
Q 027788 179 AIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 179 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+....... .+..+.+|+.......++.++|+||+|+
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGv 203 (342)
T cd07879 165 RHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGC 203 (342)
T ss_pred cCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHH
Confidence 76543322 1122333433333345677899999993
No 369
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=5e-26 Score=178.90 Aligned_cols=182 Identities=20% Similarity=0.299 Sum_probs=141.3
Q ss_pred eeeeeeeccccceEEEEEEecC-CCcEEEEEEeeecccC------CCHHHHHHHHHHHHHHHh-hCCCCceEEEEEEecC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQE-EGIEVAWNQVKLRTFC------DDPAMIERLFSEVRLLKT-LANKNIISLHYVWRDE 98 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~ 98 (219)
|.+.+.||+|+||.||.+.... .+..+|+|.+...... ........+..|+.++.+ ++|||++++++.+.
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-- 79 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL-- 79 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc--
Confidence 3667899999999999999877 6789999988653321 123445667788888864 79999999999884
Q ss_pred CCceEEEEeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 99 DRNTLNFITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
..+..+++|||+++++|.+++.. ...+++..++.++.|++.++.+||. .+ ++|+||+|+||+++.+ +.++|+
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~--i~H~dl~~~nil~~~~-~~~~l~ 156 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR--IVHRDLTPNNIMLGED-DKVTIT 156 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc--eeecCCCHHHEEECCC-CcEEEe
Confidence 44678899999999999887642 3468899999999999999999996 67 9999999999999865 589999
Q ss_pred ccccceeccccceeeeec----ccCccccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIRRIRCW----GRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~diws~g 213 (219)
|||.+............. ..+++......++.++|+||+|
T Consensus 157 dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG 200 (269)
T cd08528 157 DFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFG 200 (269)
T ss_pred cccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHH
Confidence 999998765543211111 1223444455677889999999
No 370
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=1.4e-26 Score=182.92 Aligned_cols=179 Identities=28% Similarity=0.461 Sum_probs=144.9
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|.+|.||+|....+++.+++|.++.... +....+.+..|+.+++.++|+|++++++.+.. ...+++++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 77 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE--EEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERKLYLVF 77 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccc--cccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCceEEEe
Confidence 456889999999999999999999999999886542 23344677889999999999999999988844 46688899
Q ss_pred ccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|+++ ++|.+++... ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||++........
T Consensus 78 e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~~l~~~ni~~~~~-~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 78 EYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR--ILHRDLKPQNILINRD-GVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChheEEEcCC-CCEEEecCCcccccCCCcc
Confidence 9997 5899988765 57999999999999999999999999 9999999999999865 6899999999987654332
Q ss_pred ------eeeecccCccccCCCccccccceeeecc
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
....+.+|+.+.....++.++|+||+|+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~ 187 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGC 187 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHH
Confidence 1112333443434446777899999993
No 371
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=2.3e-26 Score=181.88 Aligned_cols=179 Identities=28% Similarity=0.452 Sum_probs=143.0
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
++.+.||+|++|.||+|.+..++..+++|.++.... .+.....+..|+.++++++|+|++++++.+.. +..+++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 77 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE--SEGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGDLYLVF 77 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc--cchhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCCEEEEE
Confidence 456889999999999999988999999999875543 22345678889999999999999999988854 45688899
Q ss_pred ccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 108 EVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
||+++ ++.+++.. ...+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||.+........
T Consensus 78 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dl~p~nili~~~-~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 78 EFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG--ILHRDLKPENLLINTE-GVLKLADFGLARSFGSPVR 153 (283)
T ss_pred eccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC--eeecCcCHHHEEECCC-CcEEEeeeeeeEecCCCcc
Confidence 99975 77777655 357899999999999999999999999 9999999999999865 5899999999987755431
Q ss_pred ------eeeecccCccccCCCccccccceeeecc
Q 027788 187 ------RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
....+.+|+.......++.++|+||+|+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~ 187 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGC 187 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHH
Confidence 1112333333333336777899999993
No 372
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.94 E-value=6.8e-26 Score=182.06 Aligned_cols=170 Identities=17% Similarity=0.260 Sum_probs=132.1
Q ss_pred cceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccCCChH
Q 027788 37 AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLR 116 (219)
Q Consensus 37 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 116 (219)
+++.||.+....+++.||+|.++.... .....+.+..|+.+++.++|+||+++++++.. ....+++|||+++++|.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC--SKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYGSCE 87 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc--chhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEEEEeccCCCCHH
Confidence 445555555567899999999875422 34566889999999999999999999998854 45678899999999999
Q ss_pred HHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce--------
Q 027788 117 EYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-------- 186 (219)
Q Consensus 117 ~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-------- 186 (219)
+++... ..+++..+..++.|++.|+.|||+.+ ++|+||+|+||+++.+ +.++++|||.+........
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~--ivH~dlk~~Nili~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG--FIHRSVKASHILLSGD-GKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCcceEEEecC-CceEEecCccceeeccccccccccccc
Confidence 988653 45889999999999999999999999 9999999999999855 6899999998876543221
Q ss_pred -----eeeecccCccccCC-Cccccccceeeec
Q 027788 187 -----RIRCWGRRSSWRRS-CTMRITRSLWTYT 213 (219)
Q Consensus 187 -----~~~~~~~~~~~~~~-~~~~~~~diws~g 213 (219)
.+..+.+|+.+... ..++.++|+||+|
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G 197 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG 197 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHH
Confidence 11123333333322 3467789999999
No 373
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.94 E-value=4.2e-26 Score=181.11 Aligned_cols=177 Identities=20% Similarity=0.293 Sum_probs=136.7
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 106 (219)
...+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.++.++. |+|++++++.+..+ +..+++
T Consensus 7 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~~~~~ 81 (288)
T cd06616 7 KDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD---EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GDCWIC 81 (288)
T ss_pred HHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC---hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--CcEEEE
Confidence 344689999999999999999999999998875432 244567889999999986 99999999988554 446779
Q ss_pred eccccCCChHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 107 TEVCTSGNLREYRK-----KHRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 107 ~e~~~~g~L~~~~~-----~~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
||+++ +++.++.. ....+++..+..++.|++.|+.|||+. + ++|+||+|+||+++.+ +.++|+|||++..
T Consensus 82 ~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~-~~~kl~dfg~~~~ 157 (288)
T cd06616 82 MELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK--IIHRDVKPSNILLDRN-GNIKLCDFGISGQ 157 (288)
T ss_pred Eeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC--eeccCCCHHHEEEccC-CcEEEeecchhHH
Confidence 99986 45554322 235689999999999999999999974 7 9999999999999865 5899999999976
Q ss_pred ccccce-----eeeecccCccccCC--Cccccccceeeec
Q 027788 181 VGRAIR-----RIRCWGRRSSWRRS--CTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~diws~g 213 (219)
...... ++..+.+|+..... ..++.++|+||+|
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG 197 (288)
T cd06616 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLG 197 (288)
T ss_pred hccCCccccccCccCccCHHHhccccccCCcchhhhhHHH
Confidence 544322 22223344433333 3577789999999
No 374
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=2.8e-26 Score=187.53 Aligned_cols=182 Identities=23% Similarity=0.316 Sum_probs=143.3
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDR 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 100 (219)
..++-|.+.++||+|+.++||++.... .+.+|+|.+.... .+...+.-+.+|+++|.+|+ |.+|++++++...+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~--~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLE--ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhh--cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 456667788999999999999998544 3456666554333 47888899999999999995 89999999998664
Q ss_pred ceEEEEeccccCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRH-VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
.++|+|||+= ..+|.+.++.... .....+..+..|++.++.++|..+ |+|.||||.|+++= . |.+||+|||.|.
T Consensus 433 ~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g--IVHSDLKPANFLlV-k-G~LKLIDFGIA~ 507 (677)
T KOG0596|consen 433 GYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG--IVHSDLKPANFLLV-K-GRLKLIDFGIAN 507 (677)
T ss_pred ceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc--eeecCCCcccEEEE-e-eeEEeeeechhc
Confidence 5799999975 4699998876543 444578889999999999999999 99999999999985 3 589999999999
Q ss_pred eccccce--------eeeecccCccc-----cCCCc-----cccccceeeec
Q 027788 180 IVGRAIR--------RIRCWGRRSSW-----RRSCT-----MRITRSLWTYT 213 (219)
Q Consensus 180 ~~~~~~~--------~~~~~~~~~~~-----~~~~~-----~~~~~diws~g 213 (219)
.+..+-. ++..+-+|+-. .+..+ ...++||||+|
T Consensus 508 aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG 559 (677)
T KOG0596|consen 508 AIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG 559 (677)
T ss_pred ccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence 8877654 44445555532 12222 67889999999
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=3.1e-26 Score=186.51 Aligned_cols=185 Identities=28% Similarity=0.407 Sum_probs=143.4
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCC-
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDR- 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~- 100 (219)
..++| .+.+.||+|++|.||+|.+..++..+|+|.+..... .....+.+.+|+.++++++|+|++++.+++...+.
T Consensus 13 ~~~~y-~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 13 VPDRY-QNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL 89 (343)
T ss_pred ccCce-EEEEEeccCCceEEEEEEECCCCcEEEEEecccccc--hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc
Confidence 44565 677999999999999999999999999998764321 23345667889999999999999998876643321
Q ss_pred ---ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 101 ---NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 101 ---~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
..+++++|++ +++|.+++.. ..+++..+..++.|++.++.+||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~g--i~H~dlkp~Nill~~~-~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAG--IIHRDLKPSNIAVNED-CELKILDFGL 164 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEECCC-CCEEEccccc
Confidence 3478899998 5699887765 46899999999999999999999999 9999999999999865 6899999999
Q ss_pred ceeccccce---eeeecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+........ .+..+.+|+.......++.++|+||+|+
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv 204 (343)
T cd07851 165 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204 (343)
T ss_pred cccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHH
Confidence 987644321 1112223332222235567899999993
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=6.5e-26 Score=175.44 Aligned_cols=164 Identities=15% Similarity=0.251 Sum_probs=130.5
Q ss_pred ccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccCCCh
Q 027788 36 GAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNL 115 (219)
Q Consensus 36 g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L 115 (219)
|.+|.||++.+..+++.+|+|.+.... ....|...+....|||++++++.+.. ....+++|||+++++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---------EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---------hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCCCCCH
Confidence 899999999999999999999987542 12234555556679999999998854 4568899999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce---eeeecc
Q 027788 116 REYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR---RIRCWG 192 (219)
Q Consensus 116 ~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~---~~~~~~ 192 (219)
.+++.....+++..+..++.|++.++.|||+.+ ++|+||||+|++++.+ +.++++|||.+........ ....+.
T Consensus 73 ~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~--i~H~dlkp~Nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~y~ 149 (237)
T cd05576 73 WSHISKFLNIPEECVKRWAAEMVVALDALHREG--IVCRDLNPNNILLDDR-GHIQLTYFSRWSEVEDSCDGEAVENMYC 149 (237)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHEEEcCC-CCEEEecccchhccccccccCCcCcccc
Confidence 998877777999999999999999999999999 9999999999999866 5899999998876654322 112233
Q ss_pred cCccccCCCccccccceeeecc
Q 027788 193 RRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 193 ~~~~~~~~~~~~~~~diws~gi 214 (219)
+|+ ......++.++|+||+|+
T Consensus 150 aPE-~~~~~~~~~~~DvwslG~ 170 (237)
T cd05576 150 APE-VGGISEETEACDWWSLGA 170 (237)
T ss_pred CCc-ccCCCCCCchhhHHHHHH
Confidence 443 333445667899999993
No 377
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.93 E-value=1.7e-25 Score=178.52 Aligned_cols=178 Identities=20% Similarity=0.294 Sum_probs=137.9
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 105 (219)
+.+.+.||+|++|.||+|.+..++..+|+|.++... .......+..|+.++.+.. |+|++++++++.. ...+++
T Consensus 17 ~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 91 (296)
T cd06618 17 LENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT--DSDVFI 91 (296)
T ss_pred heeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC---ChHHHHHHHHHHHHHHhccCCCchHhhheeeec--CCeEEE
Confidence 478899999999999999998889999999987542 2233456667787676665 9999999999854 456888
Q ss_pred EeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 106 ITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+||+++ +++.+++.. ...+++..+..++.|++.++.|||+ .+ ++|+||+|+||+++.+ +.++|+|||++..+..
T Consensus 92 v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~--i~H~dl~p~nill~~~-~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 92 CMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIHRDVKPSNILLDAS-GNVKLCDFGISGRLVD 167 (296)
T ss_pred EeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC--EecCCCcHHHEEEcCC-CCEEECccccchhccC
Confidence 999985 577776654 3568899999999999999999997 57 9999999999999855 6899999999976643
Q ss_pred ccee-----eeecccCccccCC---Cccccccceeeec
Q 027788 184 AIRR-----IRCWGRRSSWRRS---CTMRITRSLWTYT 213 (219)
Q Consensus 184 ~~~~-----~~~~~~~~~~~~~---~~~~~~~diws~g 213 (219)
.... ...+.+|+.+... ..++.++|+||+|
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG 205 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLG 205 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHH
Confidence 3221 1223344444322 3467789999999
No 378
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=7.4e-27 Score=172.76 Aligned_cols=182 Identities=18% Similarity=0.319 Sum_probs=149.3
Q ss_pred ccccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEE
Q 027788 17 FIETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVW 95 (219)
Q Consensus 17 ~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~ 95 (219)
++.++....| .+.+++|+|-++.||.|....+.+.+++|+++. ..-+.+.+|+.+|+.|. +|||++++++.
T Consensus 31 ~i~wg~~ddY-eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-------VkkkKIkREikIL~nL~gg~NIi~L~DiV 102 (338)
T KOG0668|consen 31 VIDWGNQDDY-EIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-------VKKKKIKREIKILQNLRGGPNIIKLLDIV 102 (338)
T ss_pred eeeccccchH-HHHHHHcCccHhhHhcccccCCCceEEEeeech-------HHHHHHHHHHHHHHhccCCCCeeehhhhh
Confidence 4566666677 788999999999999999999999999999883 33467889999999997 99999999999
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
.++.....-++.|+.++.+...+- +.++...+...+.+++.||.|+|+.| |.|||+||.|++++.....++|+|+
T Consensus 103 ~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~G--ImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 103 KDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMG--IMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred cCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcC--cccccCCcceeeechhhceeeeeec
Confidence 888777777899999887776543 46788889999999999999999999 9999999999999977667899999
Q ss_pred ccceeccccceeeeecccCccccCCC-------ccccccceeeec
Q 027788 176 GVAAIVGRAIRRIRCWGRRSSWRRSC-------TMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~diws~g 213 (219)
|+|-.+.+.......+. +.+..+| .|+-+=|+||||
T Consensus 178 GLAEFYHp~~eYnVRVA--SRyfKGPELLVdy~~YDYSLD~WS~G 220 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNVRVA--SRYFKGPELLVDYQMYDYSLDMWSLG 220 (338)
T ss_pred chHhhcCCCceeeeeee--hhhcCCchheeechhccccHHHHHHH
Confidence 99998877665433222 2333333 366667888888
No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.2e-28 Score=184.52 Aligned_cols=188 Identities=22% Similarity=0.459 Sum_probs=146.9
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec-
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD- 97 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~- 97 (219)
-.+..+.|.++ .+||+|.||.||+|+..++++.||+|.+-... ...++-....+|+.+++.|.|+|++.+...|..
T Consensus 12 ~~~~~~~yek~-~kigqGtfgeVFkAr~~n~~kkvalkkvlmen--eKeGfpitalreikiL~~lkHenv~nliEic~tk 88 (376)
T KOG0669|consen 12 FCDEVSKYEKL-AKIGQGTFGEVFKARSKNTGKKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLIEICRTK 88 (376)
T ss_pred ceecchHHHHH-HhcCCchHHHHHHHhhcCccchhHHHHHHHhc--cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhc
Confidence 44566778776 79999999999999999999999998654322 133444556789999999999999887766632
Q ss_pred -----CCCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE
Q 027788 98 -----EDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK 171 (219)
Q Consensus 98 -----~~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~ 171 (219)
.....+++|+.+|+ .+|..++... -.++...+.+++.++..||.|+|+.. |+|||+|++|++|+.+ +.++
T Consensus 89 ~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k--ilHRDmKaaNvLIt~d-gilk 164 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK--ILHRDMKAANVLITKD-GILK 164 (376)
T ss_pred cCCcccccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh--HHhhcccHhhEEEcCC-ceEE
Confidence 12235889999997 5888877654 57999999999999999999999999 9999999999999966 6899
Q ss_pred Eeccccceeccccce--ee-------eecccCcc-ccCCCccccccceeeec
Q 027788 172 IGDLGVAAIVGRAIR--RI-------RCWGRRSS-WRRSCTMRITRSLWTYT 213 (219)
Q Consensus 172 l~dfg~a~~~~~~~~--~~-------~~~~~~~~-~~~~~~~~~~~diws~g 213 (219)
|+|||+++.+..... +. +.|..|++ ....++|.++-|||+-|
T Consensus 165 lADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAg 216 (376)
T KOG0669|consen 165 LADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAG 216 (376)
T ss_pred eeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHH
Confidence 999999976654432 11 22333333 45677789999999988
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.93 E-value=8.5e-26 Score=176.75 Aligned_cols=180 Identities=22% Similarity=0.378 Sum_probs=138.5
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC-CCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+.+.||+|+||.||++.+...+..+++|.++..... ........+..|+.+++.++|||++++++.+..+ ...++
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l 79 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAFCI 79 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--CceEE
Confidence 37789999999999999998887777777776542221 1222334566799999999999999999888543 45788
Q ss_pred EeccccCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 106 ITEVCTSGNLREYRKK----HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++||+++++|.+++.. ...+++..+..++.|++.++.+||+.+ ++|+||+|+|++++. +.++++|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--i~h~~l~~~nili~~--~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR--ILHRDLKAKNIFLKN--NLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC--ccccCCChhheEeec--CCEeecccCceeec
Confidence 9999999999987653 346899999999999999999999999 999999999999974 36999999999876
Q ss_pred cccce------eeeecccCccccCCCccccccceeeec
Q 027788 182 GRAIR------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 182 ~~~~~------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..... ++..+.+| +......++.++|+||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~p-e~~~~~~~~~~~Dv~slG 192 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSP-EALKHQGYDSKSDIWSLG 192 (260)
T ss_pred CCCcccccCCCCCcCccCH-HHHccCCCCchhhHHHHH
Confidence 44322 11122223 333445567789999999
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-27 Score=176.30 Aligned_cols=177 Identities=20% Similarity=0.275 Sum_probs=142.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHh-hCCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKT-LANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
..||.|+||.|++..++.+|+..|||.+.... .....++++.|.++..+ =+.|||+++++....++. .|+.||.
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n---~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--cWiCMEL 144 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN---IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--CWICMEL 144 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeecc---chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc--eeeeHHH
Confidence 46999999999999999999999999988654 35566888999987654 468999999998876654 7889999
Q ss_pred ccCCChHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 110 CTSGNLREYRK-----KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 110 ~~~g~L~~~~~-----~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+. .+|..+-. ....++++.+..+....+.||.||...-. ++|||+||+|||++. .|.+||+|||.+-.+...
T Consensus 145 Md-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk-iIHRDvKPSNILldr-~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK-IIHRDVKPSNILLDR-HGDVKLCDFGICGQLVDS 221 (361)
T ss_pred Hh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh-hhhccCChhheEEec-CCCEeeecccchHhHHHH
Confidence 95 67776532 23468899999999999999999986532 999999999999994 479999999999888766
Q ss_pred ceee-----eecccCccccCCCc-cccccceeeeccc
Q 027788 185 IRRI-----RCWGRRSSWRRSCT-MRITRSLWTYTRL 215 (219)
Q Consensus 185 ~~~~-----~~~~~~~~~~~~~~-~~~~~diws~gi~ 215 (219)
..++ .-+-+|+...++.. |+-+||+|||||+
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGIT 258 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGIT 258 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcce
Confidence 6533 34445666665555 8999999999964
No 382
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=3.2e-24 Score=173.92 Aligned_cols=158 Identities=16% Similarity=0.141 Sum_probs=118.2
Q ss_pred CCCCCccccCCCCceeeeeeeeccccceEEEEEEecC-CCcEEEEEEeeeccc-CCCHHHHHHHHHHHHHHHhhCCCCce
Q 027788 12 KDSEPFIETDPTGRYGRYNELLGSGAVKKVYRAFDQE-EGIEVAWNQVKLRTF-CDDPAMIERLFSEVRLLKTLANKNII 89 (219)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~~~~i~ 89 (219)
..+.+.....+....|.+.+.||+|+||.||+|++.. ++..+|+|.+..... .......+.+.+|++++++++|+|++
T Consensus 5 ~~~~~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv 84 (365)
T PRK09188 5 DVPLPGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVV 84 (365)
T ss_pred CCCCcccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCC
Confidence 3444444444555556899999999999999998876 677789998652211 01234456789999999999999998
Q ss_pred EEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCC-CCCceEEeCCCC
Q 027788 90 SLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDL-NCSNVFVNGNTG 168 (219)
Q Consensus 90 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl-~~~nili~~~~~ 168 (219)
..+..+ ...+++|||+++++|.. +.. .. ...++.|++.++.+||+.+ ++|||| ||+||+++.+ +
T Consensus 85 ~~l~~~-----~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~g--IiHrDL~KP~NILv~~~-~ 149 (365)
T PRK09188 85 PQLLAT-----GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAG--ITHNDLAKPQNWLMGPD-G 149 (365)
T ss_pred cEEEEc-----CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCC--CeeCCCCCcceEEEcCC-C
Confidence 533222 12588999999999963 221 11 1467889999999999999 999999 9999999755 5
Q ss_pred cEEEeccccceecccc
Q 027788 169 QVKIGDLGVAAIVGRA 184 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~ 184 (219)
.++|+|||+|+.+...
T Consensus 150 ~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 150 EAAVIDFQLASVFRRR 165 (365)
T ss_pred CEEEEECccceecccC
Confidence 8999999999977553
No 383
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.92 E-value=3.4e-25 Score=167.76 Aligned_cols=177 Identities=19% Similarity=0.285 Sum_probs=140.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
..||.|+.|.|++++.+.+|...|||...... .....++++..+.++.+- ++|.|++.+++|..... +++.||.
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d--V~IcMel 172 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD--VFICMEL 172 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccC---CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch--HHHHHHH
Confidence 46999999999999999999999999876332 344558888888877554 48999999999976544 6678888
Q ss_pred ccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccceee
Q 027788 110 CTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI 188 (219)
Q Consensus 110 ~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~~ 188 (219)
+. ..+..++.. .+++++..+..+..-++.||.||..+. .++|||+||+|||++ +.|++|++|||.+-++......+
T Consensus 173 Ms-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH-~viHRDvKPSNILlD-e~GniKlCDFGIsGrlvdSkAht 249 (391)
T KOG0983|consen 173 MS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKAHT 249 (391)
T ss_pred HH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc-ceeecccCccceEEc-cCCCEEeecccccceeecccccc
Confidence 84 566666543 567999999999999999999999653 299999999999999 55799999999999887766533
Q ss_pred e-----ecccCccccC--CCccccccceeeeccc
Q 027788 189 R-----CWGRRSSWRR--SCTMRITRSLWTYTRL 215 (219)
Q Consensus 189 ~-----~~~~~~~~~~--~~~~~~~~diws~gi~ 215 (219)
. .+-+|+.... .+.|+-.+|+|||||.
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGIT 283 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGIT 283 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccc
Confidence 3 3444554432 4668888999999954
No 384
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=5.2e-27 Score=195.25 Aligned_cols=189 Identities=25% Similarity=0.408 Sum_probs=158.9
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecC
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDE 98 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 98 (219)
..+|..+|+ +.+.+|+|+||.||+|++..+++..|+|+++... .+.++-+..|+-.++..+||||+.+++.+...
T Consensus 10 rrnP~ddye-llqrvgsgTygdvyKaRd~~s~elaavkvVkLep----~dd~~~iqqei~~~~dc~h~nivay~gsylr~ 84 (829)
T KOG0576|consen 10 RRNPQDDYE-LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP----GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR 84 (829)
T ss_pred hcCCccchh-heeeecCCcccchhhhcccccCchhhheeeeccC----CccccccccceeeeecCCCcChHHHHhhhhhh
Confidence 346778885 5599999999999999999999999999999763 33456677899999999999999999998654
Q ss_pred CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+ .+|+.||||.+|+|.+.-...+++++.++..+++..+.++.|||+.+ -+|||+|-.||+++.. |.+|+.|||.+
T Consensus 85 d--klwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g--k~hRdiKGanilltd~-gDvklaDfgvs 159 (829)
T KOG0576|consen 85 D--KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG--KIHRDIKGANILLTDE-GDVKLADFGVS 159 (829)
T ss_pred c--CcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC--cccccccccceeeccc-CceeecccCch
Confidence 4 48899999999999987666778999999999999999999999999 8999999999999844 79999999999
Q ss_pred eeccccce------eeeecccCcc--ccCCCccccccceeeeccccc
Q 027788 179 AIVGRAIR------RIRCWGRRSS--WRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 179 ~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~diws~gi~~~ 217 (219)
..+.-... ++..|-+|+- .-+...|.-.+|+|++||.|+
T Consensus 160 aqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAi 206 (829)
T KOG0576|consen 160 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAI 206 (829)
T ss_pred hhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchh
Confidence 88866553 3333444432 246777888899999999886
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.92 E-value=9.7e-25 Score=171.52 Aligned_cols=185 Identities=17% Similarity=0.250 Sum_probs=145.5
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC------CceEE
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK------NIISL 91 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~~ 91 (219)
..+|.....|.+.+.+|+|.||.|-.+.+..++..||+|+++.- ....+..+.|+++++++.+. -++.+
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m 156 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-----DKYREAALIEIEVLQKINESDPNGKFRCVQM 156 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-----HHHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence 45666444457889999999999999999999999999998732 33445567899999999542 24555
Q ss_pred EEEEecCCCceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC---
Q 027788 92 HYVWRDEDRNTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN--- 166 (219)
Q Consensus 92 ~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~--- 166 (219)
.++| +-.+.++++.|.+ |.++.+++..+ .+++...+..+..|++.++.+||+.+ ++|-||||+||++-+.
T Consensus 157 ~~wF--dyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k--l~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 157 RDWF--DYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK--LTHTDLKPENILFVSSEYF 231 (415)
T ss_pred ehhh--hccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc--eeecCCChheEEEeccceE
Confidence 5666 4456689999998 56999998654 46899999999999999999999999 9999999999997211
Q ss_pred ----------------CCcEEEeccccceeccccc---eeeeecccCccccCCCccccccceeeec
Q 027788 167 ----------------TGQVKIGDLGVAAIVGRAI---RRIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 167 ----------------~~~~~l~dfg~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
...++++|||.|....... .++..+++|+ ...+-+++.++|+||.|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPE-ViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPE-VILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCch-heeccCcCCccCceeee
Confidence 1258999999998776655 3666777764 44455677789999999
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.92 E-value=6.1e-25 Score=188.64 Aligned_cols=149 Identities=20% Similarity=0.236 Sum_probs=104.1
Q ss_pred ceeeeeeeeccccceEEEEEEecCC----CcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEE----Ee
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEE----GIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYV----WR 96 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~----~~ 96 (219)
..|.+.+.||+|+||.||+|++..+ +..||+|.++... . .+....| .++...+.++..+... ..
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~----~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG----A--VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc----h--hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 3448889999999999999999888 8999999876321 1 1111111 1111112222211111 11
Q ss_pred cCCCceEEEEeccccCCChHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCC
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKHRH--------------------VSVKALKKWSKQILKGLNYLHTHEPCVIHRDL 156 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~--------------------~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl 156 (219)
......+++++||+++++|.+++..... .....+..++.|++.+|.|||+.+ |+||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g--IiHRDL 281 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG--IVHRDV 281 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC--EEeCcC
Confidence 1344568899999999999988764321 112345678999999999999999 999999
Q ss_pred CCCceEEeCCCCcEEEeccccceeccc
Q 027788 157 NCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 157 ~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
||+|||++.+.+.+||+|||+|+.+..
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~ 308 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRV 308 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccc
Confidence 999999986556899999999986543
No 387
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9.1e-26 Score=170.60 Aligned_cols=192 Identities=19% Similarity=0.322 Sum_probs=145.8
Q ss_pred cccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEe
Q 027788 18 IETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWR 96 (219)
Q Consensus 18 ~~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~ 96 (219)
...+....| .+++.+|+|.||.+-+|+++.++..+++|.++.. ....++|.+|...--.|. |.||+..+++-.
T Consensus 18 ~kv~l~d~y-~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-----~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 18 KKVDLEDVY-TINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-----QTTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred cccchhhhh-hHHHHhcccceeeEEeeeccCCceEEEeeccCcc-----hhhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 344455555 8999999999999999999999999999988743 344577888887666664 789998776543
Q ss_pred cCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe-CCCCcEEEecc
Q 027788 97 DEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN-GNTGQVKIGDL 175 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~-~~~~~~~l~df 175 (219)
+..++.++++|++|.|+|.+-+.. ..+.+.-..+++.|+++|+.|+|+.+ ++|||||.+|||+. .+..++|++||
T Consensus 92 -qt~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHskn--lVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 92 -QTSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKN--LVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred -hcCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccc--hhhcccccceEEEecCCccEEEeeec
Confidence 334567789999999999876654 35778889999999999999999999 99999999999964 56668999999
Q ss_pred ccceeccccceee---eecccCccc--cCCC--ccccccceeeeccccccC
Q 027788 176 GVAAIVGRAIRRI---RCWGRRSSW--RRSC--TMRITRSLWTYTRLGCAC 219 (219)
Q Consensus 176 g~a~~~~~~~~~~---~~~~~~~~~--~~~~--~~~~~~diws~gi~~~~c 219 (219)
|++...+...... ..+..|+.. ..+. ...+..|+|.|||+-+-|
T Consensus 168 G~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~c 218 (378)
T KOG1345|consen 168 GLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYC 218 (378)
T ss_pred ccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeee
Confidence 9998876654321 122233321 1222 245669999999765544
No 388
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.92 E-value=2.8e-25 Score=178.68 Aligned_cols=179 Identities=21% Similarity=0.252 Sum_probs=137.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHH--hhCCCCceEEEEEEecCC--CceE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLK--TLANKNIISLHYVWRDED--RNTL 103 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~--~l~~~~i~~~~~~~~~~~--~~~~ 103 (219)
.+.++||+|.||.||+|.. +++.||||++... ..+.+.+|-+++. .++|+||+++++.-.... .-.+
T Consensus 213 ~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~-------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey 283 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ-------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY 283 (534)
T ss_pred hhHHHhhcCccceeehhhc--cCceeEEEecCHH-------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence 5558999999999999964 4589999998743 3366788888886 558999999876653222 2367
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC-------CCeeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHE-------PCVIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~-------~~i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
+||++|.+.|+|.+++..+ ..++....+++..++.||+|||+.. |+|.|||||.+|||+..| ++..|+|||
T Consensus 284 wLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D-lTccIaDFG 361 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND-LTCCIADFG 361 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC-CcEEeeccc
Confidence 8999999999999999865 7899999999999999999999753 469999999999999855 689999999
Q ss_pred cceeccccce--------eeeecccCcccc-----CCCccccccceeeec--cccc
Q 027788 177 VAAIVGRAIR--------RIRCWGRRSSWR-----RSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 177 ~a~~~~~~~~--------~~~~~~~~~~~~-----~~~~~~~~~diws~g--i~~~ 217 (219)
+|.++..... ++..+-+|+-.- ..+.-=...||+|+| .|.+
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi 417 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI 417 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 9999976553 333333444211 111111237999999 6655
No 389
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-24 Score=187.45 Aligned_cols=183 Identities=26% Similarity=0.360 Sum_probs=146.2
Q ss_pred CCCceeeeeeeeccccceEEEEEEec----C---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEE
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQ----E---EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHY 93 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~----~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~ 93 (219)
.......+.+.+|+|.||.|++|... . ....||||.++... .....+.+..|+++++.+. |+|++.+.+
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~---~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA---SSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc---CcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 33344467779999999999999732 1 24679999887554 3356688999999999885 999999999
Q ss_pred EEecCCCceEEEEeccccCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCC
Q 027788 94 VWRDEDRNTLNFITEVCTSGNLREYRKKHR----------------HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLN 157 (219)
Q Consensus 94 ~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~----------------~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~ 157 (219)
.+.. ...+++++||+..|+|.++++..+ .++....+.++.||+.|++||++.. ++||||.
T Consensus 370 ~~t~--~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~--~vHRDLA 445 (609)
T KOG0200|consen 370 ACTQ--DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP--CVHRDLA 445 (609)
T ss_pred eecc--CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC--ccchhhh
Confidence 9966 456788999999999999987654 3788899999999999999999999 9999999
Q ss_pred CCceEEeCCCCcEEEeccccceeccccceee---------eecccCccccCCCccccccceeeec
Q 027788 158 CSNVFVNGNTGQVKIGDLGVAAIVGRAIRRI---------RCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 158 ~~nili~~~~~~~~l~dfg~a~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
.+||++..+ ..+||+|||+|+......... ..|.+|+.+.. ..|+.++|+||+|
T Consensus 446 aRNVLi~~~-~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfG 508 (609)
T KOG0200|consen 446 ARNVLITKN-KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFG 508 (609)
T ss_pred hhhEEecCC-CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHH
Confidence 999999866 478999999999765544321 12444433333 7789999999999
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9e-26 Score=179.50 Aligned_cols=182 Identities=21% Similarity=0.266 Sum_probs=150.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEEE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 106 (219)
++...||+|+||.|-+|+.+.+.+.+|||++++.....++ .++-.+.|-.+|+... -|.++.++.+|+. .+.+|+|
T Consensus 352 nFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD-Dvectm~EKrvLAL~~kppFL~qlHScFQT--mDRLyFV 428 (683)
T KOG0696|consen 352 NFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD-DVECTMVEKRVLALPGKPPFLVQLHSCFQT--MDRLYFV 428 (683)
T ss_pred ceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC-cccceehhhhheecCCCCchHHHHHHHhhh--hhheeeE
Confidence 5667899999999999999999999999999987765433 3466677888887665 4678888888854 4558899
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR 186 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~ 186 (219)
|||+.||+|...++.-+.+.+..+..++..|+.||-+||+++ |++||||.+|++++.+ |.+||.|||+++....+..
T Consensus 429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg--IiYRDLKLDNvmLd~e-GHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG--IIYRDLKLDNVMLDSE-GHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC--eeeeeccccceEeccC-CceEeeecccccccccCCc
Confidence 999999999999998889999999999999999999999999 9999999999999977 6999999999998766554
Q ss_pred -eeeecccCccc----cCCCccccccceeeeccc
Q 027788 187 -RIRCWGRRSSW----RRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 187 -~~~~~~~~~~~----~~~~~~~~~~diws~gi~ 215 (219)
..+.+|+|... ..=.+|.-+.|-||+|++
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVL 539 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 539 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHH
Confidence 33456665532 233456677899999943
No 391
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=7.4e-24 Score=161.68 Aligned_cols=178 Identities=29% Similarity=0.458 Sum_probs=145.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+.||+|++|.||++....+++.+++|.+...... ...+.+.+|++.+++++|+|++++++.+... ...++++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~~v~ 76 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLYLVM 76 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceEEEE
Confidence 5678999999999999999888999999998855321 2567889999999999999999999887543 5577899
Q ss_pred ccccCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc-
Q 027788 108 EVCTSGNLREYRKKHRH-VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI- 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~- 185 (219)
|++++++|.+++..... +++..+..++.+++.++.+||..+ ++|+|+++.|++++.+ +.++|+|||.+.......
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~di~~~ni~v~~~-~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG--IVHRDLKPENILLGMD-GLVKLADFGLARFIHRDLA 153 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCC-CCEEEeeCceeeEecCccc
Confidence 99998899999877655 899999999999999999999998 9999999999999866 589999999998876643
Q ss_pred -e-----eeeecccCccccCCCccccccceeeec
Q 027788 186 -R-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 -~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
. ....+..|+.......++.++|+||+|
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG 187 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLG 187 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHH
Confidence 1 111122233222555666789999999
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=4.5e-24 Score=194.67 Aligned_cols=170 Identities=17% Similarity=0.266 Sum_probs=130.5
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+..+.||+|+||.||+|....++..||+|.++.... ....|++.+++++||||+++++++..+ ...+++|
T Consensus 693 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~lv~ 762 (968)
T PLN00113 693 KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--------IPSSEIADMGKLQHPNIVKLIGLCRSE--KGAYLIH 762 (968)
T ss_pred CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--------ccHHHHHHHhhCCCCCcceEEEEEEcC--CCCEEEE
Confidence 455789999999999999988999999998763221 112468889999999999999999654 4577899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI- 185 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~- 185 (219)
||+++|+|.+++. .+++..+..++.|++.|+.|||.. .+.++|||+||+||+++.+ ...++. |+.........
T Consensus 763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~-~~~~~~-~~~~~~~~~~~~ 837 (968)
T PLN00113 763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGK-DEPHLR-LSLPGLLCTDTK 837 (968)
T ss_pred eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCC-CceEEE-eccccccccCCC
Confidence 9999999999886 378899999999999999999944 2339999999999999855 355554 55543332211
Q ss_pred -eeeeecccCccccCCCccccccceeeec
Q 027788 186 -RRIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..+..|.+|| ......++.++||||+|
T Consensus 838 ~~~t~~y~aPE-~~~~~~~~~~sDv~S~G 865 (968)
T PLN00113 838 CFISSAYVAPE-TRETKDITEKSDIYGFG 865 (968)
T ss_pred ccccccccCcc-cccCCCCCcccchhhHH
Confidence 1223445554 44556688899999999
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=180.96 Aligned_cols=174 Identities=19% Similarity=0.309 Sum_probs=140.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l 105 (219)
|.+...+|.|+|+.+-.+.+..++...++|++..+... ..+|+.++.+. +|||++++.+++ .+...+|+
T Consensus 324 y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~--------~~~e~~~~~~~~~h~niv~~~~v~--~~~~~~~~ 393 (612)
T KOG0603|consen 324 YEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD--------NQDEIPISLLVRDHPNIVKSHDVY--EDGKEIYL 393 (612)
T ss_pred hccccccCCCCccceeeeeccccccchhheeccccccc--------cccccchhhhhcCCCcceeeccee--cCCceeee
Confidence 36777899999999999999999999999999866321 12477665544 799999999999 56677899
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|||.+.++.+.+.+...+.+. ..+..|+.+++.++.|||.++ ++||||||+|||++.+.++++|+|||.++......
T Consensus 394 v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~g--vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~ 470 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQG--VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC 470 (612)
T ss_pred eehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcC--eeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence 999999888887776655455 777789999999999999999 99999999999995355789999999999887763
Q ss_pred e---eeeecccCccccCCCccccccceeeecc
Q 027788 186 R---RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 186 ~---~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
. -+..+.+|+ .....+|+..+|+||||+
T Consensus 471 ~tp~~t~~y~APE-vl~~~~yt~acD~WSLGv 501 (612)
T KOG0603|consen 471 DTPALTLQYVAPE-VLAIQEYTEACDWWSLGV 501 (612)
T ss_pred cccchhhcccChh-hhccCCCCcchhhHHHHH
Confidence 2 233344554 444888999999999994
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=7.4e-25 Score=170.43 Aligned_cols=184 Identities=22% Similarity=0.298 Sum_probs=155.6
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~~ 104 (219)
-+++.+.||+|+|.+|..++.+++.+.+|+|++++..+.++ ....-...|-.++.+. +||.++-++.+|+.+. .++
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndd-edidwvqtek~vfe~asn~pflvglhscfqtes--rlf 327 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES--RLF 327 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCc-ccchhHHhhHHHHHhccCCCeEEehhhhhcccc--eEE
Confidence 34777899999999999999999999999999997776543 3345667788888655 6899999998886654 477
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+|.||.+||+|.-.++.+++++++.++.+...|+.+|.|||+.+ |++||||.+|++++.+ |.+|+.|+|+++.--.+
T Consensus 328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg--iiyrdlkldnvlldae-ghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG--IIYRDLKLDNVLLDAE-GHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC--eeeeeccccceEEccC-CceeecccchhhcCCCC
Confidence 89999999999988888899999999999999999999999999 9999999999999977 69999999999876544
Q ss_pred ce-eeeecccCc----cccCCCccccccceeeeccc
Q 027788 185 IR-RIRCWGRRS----SWRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 185 ~~-~~~~~~~~~----~~~~~~~~~~~~diws~gi~ 215 (219)
.. ..+.+|+|- +..+..+|..+.|-|+||++
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvl 440 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL 440 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHH
Confidence 43 334466654 56788999999999999943
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=5.2e-24 Score=177.02 Aligned_cols=148 Identities=16% Similarity=0.293 Sum_probs=131.9
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+-||-|+||.|-++....+...+|+|-+.+..+. .-.++.+.+.|..+|...+++=+++++..| ++++.+|+||
T Consensus 632 vkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl-~rnQvaHVKAERDILAEADn~WVVrLyySF--QDkdnLYFVM 708 (1034)
T KOG0608|consen 632 VKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL-MRNQVAHVKAERDILAEADNEWVVRLYYSF--QDKDNLYFVM 708 (1034)
T ss_pred EEEeeecccccceeEEEeecchhhHHHHhhhHHHHHH-hhhhhhhhhhhhhhHhhcCCcceEEEEEEe--ccCCceEEEE
Confidence 3448899999999999998899999999988755433 234668899999999999999999999999 4556799999
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
+|++||++.+++-..+-|.+...++++..+..|+++.|..+ ++||||||+|||||.+ |.+||.|||||..+
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG--FIHRDiKPDNILIDrd-GHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG--FIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 779 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc--ceecccCccceEEccC-Cceeeeeccccccc
Confidence 99999999999888889999999999999999999999999 9999999999999966 79999999999765
No 396
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=3.4e-23 Score=154.81 Aligned_cols=146 Identities=19% Similarity=0.196 Sum_probs=110.1
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH--H--------------------HHHHHHHHHHHHHhhCCCC
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP--A--------------------MIERLFSEVRLLKTLANKN 87 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~--~--------------------~~~~~~~E~~~l~~l~~~~ 87 (219)
...||+|++|.||+|.+. +|+.||+|+++........ . .......|+.++.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999986 8999999999764321110 0 0122345999999998777
Q ss_pred ceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCeeeeCCCCCceEEeCC
Q 027788 88 IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYL-HTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 88 i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~l-h~~~~~i~h~dl~~~nili~~~ 166 (219)
+........ .+ .+++|||++++++.........++...+..++.|++.++.++ |+.+ ++||||||+||+++ +
T Consensus 81 v~~p~~~~~-~~---~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g--iiHrDlkP~NIli~-~ 153 (190)
T cd05147 81 IPCPEPILL-KS---HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR--LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCCcEEEe-cC---CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEE-C
Confidence 643322221 22 268999998877765433345789999999999999999999 6889 99999999999998 3
Q ss_pred CCcEEEeccccceecccc
Q 027788 167 TGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~ 184 (219)
+.++|+|||+|.....+
T Consensus 154 -~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 154 -GKLYIIDVSQSVEHDHP 170 (190)
T ss_pred -CcEEEEEccccccCCCc
Confidence 47999999999865443
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.90 E-value=4e-23 Score=174.12 Aligned_cols=155 Identities=19% Similarity=0.249 Sum_probs=111.7
Q ss_pred eeeeeeeeccccceEEEEEEec----------------CCCcEEEEEEeeecccCCCHH----------HHHHHHHHHHH
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQ----------------EEGIEVAWNQVKLRTFCDDPA----------MIERLFSEVRL 79 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~----------------~~~~~vavK~~~~~~~~~~~~----------~~~~~~~E~~~ 79 (219)
.|.+.++||+|+||.||+|... ..++.||||.++......... ..+....|+..
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 4488899999999999999742 345679999987532110000 11223346666
Q ss_pred HHhhCCCCc-----eEEEEEEecC------CCceEEEEeccccCCChHHHHHhCC------------------------C
Q 027788 80 LKTLANKNI-----ISLHYVWRDE------DRNTLNFITEVCTSGNLREYRKKHR------------------------H 124 (219)
Q Consensus 80 l~~l~~~~i-----~~~~~~~~~~------~~~~~~lv~e~~~~g~L~~~~~~~~------------------------~ 124 (219)
+.+++|.++ +++.++|... .....++|+||+++++|.+++.... .
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 677766543 4555555321 2245789999999999998875321 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 125 VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 125 ~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
.++..+..++.|++.++.|+|..+ ++||||||+||+++.+ +.++|+|||++.....
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~--ivHrDLKp~NILl~~~-~~~kL~DFGla~~~~~ 361 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG--IVHRDIKPENLLVTVD-GQVKIIDFGAAVDMCT 361 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC--eecCCCchHhEEECCC-CcEEEEeCcCcccccc
Confidence 345678889999999999999999 9999999999999866 5899999999976543
No 398
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=5e-23 Score=156.34 Aligned_cols=170 Identities=12% Similarity=0.088 Sum_probs=128.1
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHH------HHHHHHHHHhhCCCCceEEEEEEe
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIER------LFSEVRLLKTLANKNIISLHYVWR 96 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~------~~~E~~~l~~l~~~~i~~~~~~~~ 96 (219)
.++| +..+.+|.|+||.||.+.. ++..+++|++..... ..+...+. +.+|+..+.+++|+++..+.+++.
T Consensus 30 ~~~y-~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~-~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 30 SYNI-KTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVK-RTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred hCce-EEEEEecCCCceEEEEEec--CCCcEEEEEechhcC-chHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 3555 8999999999999999754 466899999875443 33444444 568999999999999999887765
Q ss_pred cCC------CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcE
Q 027788 97 DED------RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQV 170 (219)
Q Consensus 97 ~~~------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~ 170 (219)
... ....+++|||++|.+|.+... .++ ....+++.++..+|+.+ ++|+|++|.|++++++ + +
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~g--i~H~Dikp~Nili~~~-g-i 173 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHG--MVSGDPHKGNFIVSKN-G-L 173 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcC--CccCCCChHHEEEeCC-C-E
Confidence 332 134678999999989977632 233 24568899999999999 9999999999999865 5 9
Q ss_pred EEeccccceeccccceeeeecccCccccCCCccccccceeeeccc
Q 027788 171 KIGDLGVAAIVGRAIRRIRCWGRRSSWRRSCTMRITRSLWTYTRL 215 (219)
Q Consensus 171 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diws~gi~ 215 (219)
+++|||........... ..+...+.|..++|+||||++
T Consensus 174 ~liDfg~~~~~~e~~a~-------d~~vler~y~~~~di~~lg~~ 211 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK-------DRIDLERHYGIKNEIKDLGYY 211 (232)
T ss_pred EEEECCCcccccchhhH-------HHHHHHhHhcccccccceeEe
Confidence 99999988765433211 124445556678999999954
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=2e-22 Score=151.54 Aligned_cols=175 Identities=29% Similarity=0.514 Sum_probs=139.5
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccC
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTS 112 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 112 (219)
||+|.+|.||++....++..+++|.+...... ...+.+.+|+..++.++|++++++++.+... ...++++|++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS---SLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccch---hHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCC
Confidence 68999999999999888999999998855321 1357788999999999999999999988543 567889999998
Q ss_pred CChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-----
Q 027788 113 GNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR----- 186 (219)
Q Consensus 113 g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~----- 186 (219)
++|.+++... ..++...+..++.+++.++.+||..+ ++|+||+|.||+++...+.++++|||.+........
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 9999988765 46899999999999999999999999 999999999999986235899999999987755421
Q ss_pred -eeeecccCccccCCCccccccceeeecc
Q 027788 187 -RIRCWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
....+..|+........+.+.|+|++|+
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~ 182 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGV 182 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHH
Confidence 1111222222222226667799999993
No 400
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90 E-value=1.8e-22 Score=151.12 Aligned_cols=146 Identities=20% Similarity=0.219 Sum_probs=111.8
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCC--------------------HH-H-HHHHHHHHHHHHhhCCCC
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDD--------------------PA-M-IERLFSEVRLLKTLANKN 87 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~--------------------~~-~-~~~~~~E~~~l~~l~~~~ 87 (219)
...||+|++|.||+|.+. +|+.||+|+++....... .. . ...+..|...+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999976 899999999886521100 00 0 123457899999999988
Q ss_pred ceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEeCC
Q 027788 88 IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 88 i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~~~ 166 (219)
+.........+ .+++|||++++++.........++......++.|++.++.++|. .+ ++|+||||+||+++ +
T Consensus 81 i~~p~~~~~~~----~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g--ivHrDlkP~NIll~-~ 153 (190)
T cd05145 81 VPVPEPILLKK----NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG--LVHGDLSEYNILYH-D 153 (190)
T ss_pred CCCceEEEecC----CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCChhhEEEE-C
Confidence 75443333222 26899999877554332233467888999999999999999999 89 99999999999998 4
Q ss_pred CCcEEEeccccceecccc
Q 027788 167 TGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 167 ~~~~~l~dfg~a~~~~~~ 184 (219)
+.++|+|||++.....+
T Consensus 154 -~~~~liDFG~a~~~~~~ 170 (190)
T cd05145 154 -GKPYIIDVSQAVELDHP 170 (190)
T ss_pred -CCEEEEEcccceecCCC
Confidence 58999999999887664
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.90 E-value=4.7e-23 Score=158.59 Aligned_cols=168 Identities=29% Similarity=0.457 Sum_probs=136.8
Q ss_pred cceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccCCChH
Q 027788 37 AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLR 116 (219)
Q Consensus 37 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 116 (219)
+||.||+|....++..+++|.+...... ...+.+..|+..+++++|+|++++.+.+... ...++++|++++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK---KKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc---cHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHH
Confidence 5899999999888999999998755421 1157888999999999999999999888543 5678899999988999
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-----eeeec
Q 027788 117 EYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-----RIRCW 191 (219)
Q Consensus 117 ~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-----~~~~~ 191 (219)
.++.....++...+..++.+++.++.+||..+ ++|+||+|+|++++.+ +.++++|||.+........ ....+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~~i~~~ni~~~~~-~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T smart00220 76 DLLKKRGRLSEDEARFYARQILSALEYLHSNG--IIHRDLKPENILLDED-GHVKLADFGLARQLDPGGLLTTFVGTPEY 152 (244)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHcC--eecCCcCHHHeEECCC-CcEEEccccceeeeccccccccccCCcCC
Confidence 98877656899999999999999999999999 9999999999999866 6899999999988766421 11122
Q ss_pred ccCccccCCCccccccceeeec
Q 027788 192 GRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 192 ~~~~~~~~~~~~~~~~diws~g 213 (219)
.. ++......++.++|+||+|
T Consensus 153 ~~-pE~~~~~~~~~~~Di~slG 173 (244)
T smart00220 153 MA-PEVLLGKGYGKAVDVWSLG 173 (244)
T ss_pred CC-HHHHccCCCCchhhHHHHH
Confidence 22 2333355567789999999
No 402
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.6e-22 Score=150.80 Aligned_cols=154 Identities=19% Similarity=0.318 Sum_probs=123.8
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC-CceEEEEEEecCCC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK-NIISLHYVWRDEDR 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~~~~~~~~~ 100 (219)
..++| ++.++||+|+||-+|.|....+|++||+|+-...... -.+..|..++..|++. .|..+..+. .+.
T Consensus 13 v~gky-~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h------pqL~yEskvY~iL~~g~GiP~i~~y~--~e~ 83 (341)
T KOG1163|consen 13 VGGKY-KLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH------PQLLYESKVYRILQGGVGIPHIRHYG--TEK 83 (341)
T ss_pred eccce-EEEEeecCCchhheeeeeeccCCceEEEEeecccCCC------cchhHHHHHHHHhccCCCCchhhhhc--ccc
Confidence 34555 8899999999999999999999999999986644332 2356799999999874 444444444 334
Q ss_pred ceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC--CcEEEecccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT--GQVKIGDLGV 177 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~--~~~~l~dfg~ 177 (219)
++-.+||+.+ |.+|.++++-+ ..++..+++.++.|++..++|+|.++ ++||||||+|+++.-+. .++.++|||+
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~--fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN--FIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc--cccccCCccceeeccccccceEEEEeccc
Confidence 5566799998 78999998754 57999999999999999999999999 99999999999986332 3688999999
Q ss_pred ceecccccee
Q 027788 178 AAIVGRAIRR 187 (219)
Q Consensus 178 a~~~~~~~~~ 187 (219)
|+.+.+..+.
T Consensus 161 aKky~d~~t~ 170 (341)
T KOG1163|consen 161 AKKYRDIRTR 170 (341)
T ss_pred hhhhcccccc
Confidence 9998776543
No 403
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-21 Score=150.59 Aligned_cols=181 Identities=19% Similarity=0.233 Sum_probs=137.7
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDR 100 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 100 (219)
.+|-.|+++++||+|+||.++.|.+.-+++.||||.-..++.. + .++-|...++.|. .++|...+.+.+ ++.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--P----QLrdEYr~YKlL~g~~GIP~vYYFGq-eG~ 97 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--P----QLRDEYRTYKLLGGTEGIPQVYYFGQ-EGK 97 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCc--c----hHHHHHHHHHHHcCCCCCCceeeecc-ccc
Confidence 5677779999999999999999999999999999986655432 2 2455777777775 578877765443 333
Q ss_pred ceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe----CCCCcEEEecc
Q 027788 101 NTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN----GNTGQVKIGDL 175 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~----~~~~~~~l~df 175 (219)
+-.+|+|.+ |.+|.+++..+ +.|+..+++.++.|++.-++++|++. +++|||||+|+||. ++...+.++||
T Consensus 98 -~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~--LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 98 -YNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD--LIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred -hhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc--eeecccCccceeecCCCCCCCceEEEEec
Confidence 334688988 78999998765 57999999999999999999999999 99999999999995 22235789999
Q ss_pred ccceeccccceeeeecccCc-------cc-----cCCCccccccceeeec
Q 027788 176 GVAAIVGRAIRRIRCWGRRS-------SW-----RRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~diws~g 213 (219)
|+|+.+.++.++.....+.- .+ -..++-+..-|+=|||
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLG 223 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALG 223 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhh
Confidence 99999998886443322210 11 1245555556777777
No 404
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.87 E-value=7.8e-22 Score=160.83 Aligned_cols=176 Identities=25% Similarity=0.334 Sum_probs=140.7
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC------CCceEEEEEEecCCC
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN------KNIISLHYVWRDEDR 100 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~~~~~ 100 (219)
|.+....|+|-|+.|-+|.+...|..||||+|... .-+.+.=+.|+++|++|+. -||++++..| ...
T Consensus 434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F--~hk 506 (752)
T KOG0670|consen 434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF--KHK 506 (752)
T ss_pred eEEEeccccceeeeeeeccccCCCCeeEEEEeecc-----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh--hhc
Confidence 36667899999999999999999999999999854 3445666789999999974 4788887777 445
Q ss_pred ceEEEEeccccCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKHR---HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
+.+|||.|.+ ..+|...+...+ .+....+..++.|+..||..|..++ ++|.||||+|||++.....+||+|||.
T Consensus 507 nHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~--vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 507 NHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG--VLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred ceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC--eeecccCccceEeccCcceeeeccCcc
Confidence 7799999998 478988887654 3677888899999999999999999 999999999999997666679999999
Q ss_pred ceeccccce----eeeecccCccccCCCccccccceeeec
Q 027788 178 AAIVGRAIR----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 178 a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|........ -...+.+| +...+-+|+.+-|+||.|
T Consensus 584 A~~~~eneitPYLVSRFYRaP-EIiLG~~yd~~iD~WSvg 622 (752)
T KOG0670|consen 584 ASFASENEITPYLVSRFYRAP-EIILGLPYDYPIDTWSVG 622 (752)
T ss_pred ccccccccccHHHHHHhccCc-ceeecCcccCCccceeec
Confidence 987655432 11223333 344455577788999998
No 405
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-22 Score=156.52 Aligned_cols=183 Identities=27% Similarity=0.351 Sum_probs=145.0
Q ss_pred cCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 20 TDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 20 ~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
+....||..+ +.+|.|.- .|-.|.+.-.++.||+|..-.+.. .....++..+|..++..++|+|+++++.+|.-..
T Consensus 13 ftv~~Ry~nL-~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~--n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~ 88 (369)
T KOG0665|consen 13 FTVPKRYVNL-KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQ--NQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQK 88 (369)
T ss_pred eeeeeeeeee-cccCCCCc-eEEecchhhccCceehhhhcCccc--cCccchhhhhhhhhhhhhcccceeeeeeccCccc
Confidence 3445677666 78998888 888899999999999998765532 2334477889999999999999999999885322
Q ss_pred ----CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 100 ----RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 100 ----~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
...+|++||++. .+|...+.. .++-.++..++.|++.|+.+||+.+ |+||||||+||+++.+ ..+||.||
T Consensus 89 ~l~~~~e~y~v~e~m~-~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~--IihRdLkPsnivv~~~-~~lKi~df 162 (369)
T KOG0665|consen 89 TLEEFQEVYLVMELMD-ANLCQVILM--ELDHETISYILYQMLCGIKHLHSAG--IIHRDLKPSNIVVNSD-CTLKILDF 162 (369)
T ss_pred cHHHHHhHHHHHHhhh-hHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcc--eeecccCcccceecch-hheeeccc
Confidence 124678999995 688877663 4778899999999999999999999 9999999999999877 48999999
Q ss_pred ccceeccccce-----eeeecccCccccCCCccccccceeeec
Q 027788 176 GVAAIVGRAIR-----RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+|+.-..... -++.+++|+-.+... |....||||.|
T Consensus 163 g~ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvG 204 (369)
T KOG0665|consen 163 GLARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVG 204 (369)
T ss_pred hhhcccCcccccCchhheeeccCchheeccC-Ccccchhhhhh
Confidence 99987666522 344555555544444 88889999999
No 406
>PRK10345 hypothetical protein; Provisional
Probab=99.86 E-value=2.4e-20 Score=140.99 Aligned_cols=138 Identities=18% Similarity=0.210 Sum_probs=105.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-----CCCCceEEEEEEecCCC-ce-E
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-----ANKNIISLHYVWRDEDR-NT-L 103 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~~~~~-~~-~ 103 (219)
+.||+|+|+.||. ++.++.. +||++.... ....+.+.+|+.+++.+ +||||+++++++.++.+ .. +
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~----~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG----DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred ceecCCCceEEEE--CCCCcCe-EEEEEeccc----cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 6899999999995 6666655 688876532 22346789999999999 57999999999966532 33 3
Q ss_pred EEEecc--ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCeeeeCCCCCceEEeCC---CCcEEEec-cc
Q 027788 104 NFITEV--CTSGNLREYRKKHRHVSVKALKKWSKQILKGL-NYLHTHEPCVIHRDLNCSNVFVNGN---TGQVKIGD-LG 176 (219)
Q Consensus 104 ~lv~e~--~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l-~~lh~~~~~i~h~dl~~~nili~~~---~~~~~l~d-fg 176 (219)
.+++|| +++++|.++++.. .+.+. ..++.|++.++ .|||+++ |+||||||+||+++.. ...++|+| ||
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~--IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNR--IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCC--EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 478999 5578999999754 45555 35677888777 9999999 9999999999999732 23699999 55
Q ss_pred ccee
Q 027788 177 VAAI 180 (219)
Q Consensus 177 ~a~~ 180 (219)
.+..
T Consensus 156 ~~~~ 159 (210)
T PRK10345 156 ESTF 159 (210)
T ss_pred Ccce
Confidence 5544
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.3e-20 Score=152.26 Aligned_cols=180 Identities=21% Similarity=0.172 Sum_probs=134.2
Q ss_pred eeeeeeeeccccceEEEEEEecCCC-cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC----CCceEEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEG-IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN----KNIISLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~i~~~~~~~~~~~~ 100 (219)
.|++.++||+|+||.||.+.+..++ ..+|+|.......... ..+..|..++..++. +++..+.+... ...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~----~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~ 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP----SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STE 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC----ccchhHHHHHHHHhhhcCCCCCCEEEEecc-CCC
Confidence 4589999999999999999987774 6789998765422111 146679999988873 58888887774 334
Q ss_pred ceEEEEeccccCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCC----CcEEEec
Q 027788 101 NTLNFITEVCTSGNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNT----GQVKIGD 174 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~----~~~~l~d 174 (219)
.+-++||+.+ |.+|.++.... +.++..+...++.|++.+|.++|+.+ ++||||||+|+.+.... ..+++.|
T Consensus 94 ~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G--~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 94 DFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG--FIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred ceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC--cccCCcCHHHeeecCCCCcccceEEEEe
Confidence 5667899988 68999987543 57999999999999999999999999 99999999999997442 3589999
Q ss_pred cccce--ecccccee---------eeeccc----CccccCCCccccccceeeec
Q 027788 175 LGVAA--IVGRAIRR---------IRCWGR----RSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 175 fg~a~--~~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~diws~g 213 (219)
||+++ .+...... ....|+ +.......+.+...|+||++
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~ 224 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLF 224 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHH
Confidence 99999 43222111 011121 22234566677789999977
No 408
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.85 E-value=8.7e-21 Score=161.77 Aligned_cols=173 Identities=23% Similarity=0.318 Sum_probs=127.9
Q ss_pred eeeeeeeeccccce-EEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCCceE
Q 027788 26 YGRYNELLGSGAVK-KVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 26 ~~~~~~~ig~g~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 103 (219)
.+.-.+.+|.|+-| .||+|.+. ++.||||.+-.. ......+|+.+|+.- +||||+++++.- .+..++
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e-------~~~~A~rEi~lL~eSD~H~NviRyyc~E--~d~qF~ 578 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE-------FFDFAQREIQLLQESDEHPNVIRYYCSE--QDRQFL 578 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH-------hHHHHHHHHHHHHhccCCCceEEEEeec--cCCceE
Confidence 33344568899885 57899874 679999976533 234567899999866 599999987655 667789
Q ss_pred EEEeccccCCChHHHHHhCC-C---CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC---C-CcEEEecc
Q 027788 104 NFITEVCTSGNLREYRKKHR-H---VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN---T-GQVKIGDL 175 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~-~---~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~---~-~~~~l~df 175 (219)
|+..|.|. -+|.+++.... . ...-..+.++.|++.|++.||+.+ |+||||||.||||+.. . .+++|+||
T Consensus 579 YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~--iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 579 YIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK--IVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc--cccccCCCceEEEEccCCCcceeEEeccc
Confidence 99999996 59999987641 1 111345678899999999999999 9999999999999852 2 36799999
Q ss_pred ccceeccccce---------eeeecccCccccCCCccccccceeeec
Q 027788 176 GVAAIVGRAIR---------RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 176 g~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
|+++++..+.. ++.-|.+|+-....+. ..+.||+|+|
T Consensus 656 glsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFslG 701 (903)
T KOG1027|consen 656 GLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSLG 701 (903)
T ss_pred ccccccCCCcchhhcccCCCCcccccCHHHHhcccc-CcccchhhcC
Confidence 99999977654 2333445544333333 3368999999
No 409
>smart00090 RIO RIO-like kinase.
Probab=99.83 E-value=9.4e-20 Score=140.65 Aligned_cols=154 Identities=19% Similarity=0.182 Sum_probs=116.3
Q ss_pred CCceeeeeeeeccccceEEEEEE-ecCCCcEEEEEEeeecccCC------------------CHH--HHHHHHHHHHHHH
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAF-DQEEGIEVAWNQVKLRTFCD------------------DPA--MIERLFSEVRLLK 81 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~-~~~~~~~vavK~~~~~~~~~------------------~~~--~~~~~~~E~~~l~ 81 (219)
.|+.+.+.+.||+|++|.||+|+ +..+|+.||+|.++...... .+. ....+..|+.+++
T Consensus 26 ~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 26 RGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred cCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 46567899999999999999998 77889999999987543210 010 1133568999999
Q ss_pred hhCCC--CceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCC
Q 027788 82 TLANK--NIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCS 159 (219)
Q Consensus 82 ~l~~~--~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ 159 (219)
++.+. .+.+++.. .. .+++||++++.++.................++.|++.++.+||..+. ++|+||||+
T Consensus 106 ~L~~~~i~~p~~~~~---~~---~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~-iiH~Dikp~ 178 (237)
T smart00090 106 RLYEAGVPVPKPIAW---RR---NVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGE-LVHGDLSEY 178 (237)
T ss_pred HHHhcCCCCCeeeEe---cC---ceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCC-EEeCCCChh
Confidence 99753 33444432 22 36899999987876654333456666778899999999999998763 899999999
Q ss_pred ceEEeCCCCcEEEeccccceeccccc
Q 027788 160 NVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 160 nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
||+++ + +.++++|||.+.....+.
T Consensus 179 NIli~-~-~~i~LiDFg~a~~~~~~~ 202 (237)
T smart00090 179 NILVH-D-GKVVIIDVSQSVELDHPM 202 (237)
T ss_pred hEEEE-C-CCEEEEEChhhhccCCcc
Confidence 99998 4 579999999998766655
No 410
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=3.7e-19 Score=144.19 Aligned_cols=141 Identities=28% Similarity=0.397 Sum_probs=114.6
Q ss_pred CccccC-CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC--------C
Q 027788 16 PFIETD-PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN--------K 86 (219)
Q Consensus 16 ~~~~~~-~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--------~ 86 (219)
++..+| ..+..|.+.++||.|.|++||+|++....+.||+|+.+. .....+...-||.+|+++.. .
T Consensus 68 pV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-----AqhYtEaAlDEIklL~~v~~~Dp~~~~~~ 142 (590)
T KOG1290|consen 68 PVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-----AQHYTEAALDEIKLLQQVREGDPNDPGKK 142 (590)
T ss_pred eeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-----hhHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 455555 443455888999999999999999999999999999873 23333556779999998842 4
Q ss_pred CceEEEEEEec--CCCceEEEEeccccCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CCCeeeeCCCCCce
Q 027788 87 NIISLHYVWRD--EDRNTLNFITEVCTSGNLREYRKK--HRHVSVKALKKWSKQILKGLNYLHTH-EPCVIHRDLNCSNV 161 (219)
Q Consensus 87 ~i~~~~~~~~~--~~~~~~~lv~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qv~~~l~~lh~~-~~~i~h~dl~~~ni 161 (219)
+|+++++.|.. .++..+++|.|++ |.+|-.+|.. .+.++...+..|++||+.||.|||+. + |+|-||||+||
T Consensus 143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENv 219 (590)
T KOG1290|consen 143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENV 219 (590)
T ss_pred eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCccee
Confidence 78999998854 4556889999999 5677777754 35799999999999999999999964 7 99999999999
Q ss_pred EEe
Q 027788 162 FVN 164 (219)
Q Consensus 162 li~ 164 (219)
|+.
T Consensus 220 Ll~ 222 (590)
T KOG1290|consen 220 LLC 222 (590)
T ss_pred eee
Confidence 985
No 411
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.81 E-value=2.2e-20 Score=147.97 Aligned_cols=184 Identities=22% Similarity=0.277 Sum_probs=144.0
Q ss_pred eeeeeeeccccceEEEEEEec-----CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCc
Q 027788 27 GRYNELLGSGAVKKVYRAFDQ-----EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRN 101 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~ 101 (219)
.++..++.+|.||+||.|... .+.+.|-+|-++... .+-++..++.|.-.+..+.|||+..+.+++.. +..
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A---S~iQv~~~L~es~lly~~sH~nll~V~~V~ie-~~~ 361 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA---SQIQVNLLLQESMLLYGASHPNLLSVLGVSIE-DYA 361 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc---cHHHHHHHHHHHHHHhcCcCCCccceeEEEee-ccC
Confidence 466667899999999999432 234556667665443 56678889999999999999999999988875 345
Q ss_pred eEEEEeccccCCChHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 102 TLNFITEVCTSGNLREYRKKH--------RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~~--------~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
..++++.+..-|+|..++.-. +.++..+...++.|++.|+.+||.++ ++|.||..+|++|+ +..++||+
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~--ViHkDiAaRNCvId-d~LqVklt 438 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG--VIHKDIAARNCVID-DQLQVKLT 438 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC--cccchhhhhcceeh-hheeEEec
Confidence 566788999889999998722 23566678888999999999999999 99999999999998 44689999
Q ss_pred ccccceeccccce--eeeecccCccccC-----CCccccccceeeec--cccc
Q 027788 174 DLGVAAIVGRAIR--RIRCWGRRSSWRR-----SCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 174 dfg~a~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~diws~g--i~~~ 217 (219)
|-.+++.+.+.+- -.-...+|..|+. +..|+..||+|||| .|.+
T Consensus 439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWEL 491 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL 491 (563)
T ss_pred cchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence 9999999876553 1123445666753 66788889999999 6653
No 412
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=3.7e-18 Score=129.76 Aligned_cols=141 Identities=19% Similarity=0.258 Sum_probs=109.7
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCC----HHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDD----PAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
+.||+|++|.||+|.. .+..+++|.......... ......+.+|+.++..+.++++.....++...+ ..+++
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv 77 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE--NFIIV 77 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--CCEEE
Confidence 5789999999999986 677899997653322111 112245778999999999988876655554333 35679
Q ss_pred eccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 107 TEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 107 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|||++|++|.+++..... ....++.+++.++.++|..+ ++|+|++|.||+++ + +.++++|||.+.....
T Consensus 78 ~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~--i~H~Dl~p~Nil~~-~-~~~~liDf~~a~~~~~ 146 (211)
T PRK14879 78 MEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG--IIHGDLTTSNMILS-G-GKIYLIDFGLAEFSKD 146 (211)
T ss_pred EEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC--cccCCCCcccEEEE-C-CCEEEEECCcccCCCc
Confidence 999999999998765322 77888999999999999999 99999999999998 4 5799999999876443
No 413
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=7.1e-18 Score=125.98 Aligned_cols=136 Identities=15% Similarity=0.055 Sum_probs=103.0
Q ss_pred eeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC-CCceEEEEEEecCCCceEEEEe
Q 027788 29 YNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN-KNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 29 ~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
....|++|+||+||.+.. .+..++.+.+.........-....+.+|++++++|+| +++.+++++. ..+++|
T Consensus 6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------~~~lvm 77 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------GRHLDR 77 (218)
T ss_pred cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------CEEEEE
Confidence 457899999999998764 6677777766644332222223467899999999964 7788887752 257899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCC-CCCceEEeCCCCcEEEeccccceecc
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDL-NCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl-~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+|+.|.+|...... . ...++.|++.++.++|+++ ++|+|| ||.||+++.+ +.++|+|||+|....
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G--IvHrDL~kp~NILv~~~-g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG--VAHNDLAKEANWLVQED-GSPAVIDFQLAVRGN 143 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc--CccCCCCCcceEEEcCC-CCEEEEECCCceecC
Confidence 99998888653321 1 1346788999999999999 999999 7999999855 589999999998544
No 414
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=7.5e-18 Score=126.96 Aligned_cols=137 Identities=19% Similarity=0.251 Sum_probs=103.9
Q ss_pred eeccccceEEEEEEecCCCcEEEEEEeeecccCCCH----HHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 32 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP----AMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.||+|++|.||+|. .++..+++|........... ....++.+|+.++..++++++......+..++ ..+++|
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--NKTIVM 76 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CCEEEE
Confidence 48999999999998 35788999986543322111 12366778999999998876544333333333 346799
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|+++|++|.+++..... .++.+++.++.++|+.+ ++|+|++|.|++++ + +.++++|||++.....
T Consensus 77 e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~g--i~H~Dl~~~Nil~~-~-~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAG--IVHGDLTTSNIIVR-D-DKLYLIDFGLGKYSDE 141 (199)
T ss_pred EEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCC--eecCCCCcceEEEE-C-CcEEEEECCCCcCCCc
Confidence 99999999987654211 78899999999999999 99999999999998 4 5899999999877544
No 415
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.77 E-value=1.3e-17 Score=143.18 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=107.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC----CHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD----DPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
...+.||+|+||.||++..... .+++|....+.... .....+++.+|+.+++.++|+++.....++..++. .
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--~ 411 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE--K 411 (535)
T ss_pred CccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC--C
Confidence 5678999999999999876433 34444432221111 11234678899999999999998877665544433 5
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|||+++++|.+++. ....++.+++.++.+||+.+ ++|||+||+||+++ + +.++++|||+++....
T Consensus 412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~g--iiHrDlkp~NILl~-~-~~~~liDFGla~~~~~ 479 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAG--IVHGDLTTSNFIVR-D-DRLYLIDFGLGKYSDL 479 (535)
T ss_pred EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCC--CccCCCChHHEEEE-C-CcEEEEeCcccccCCc
Confidence 67999999999998765 34678899999999999999 99999999999995 4 4799999999987654
Q ss_pred c
Q 027788 184 A 184 (219)
Q Consensus 184 ~ 184 (219)
.
T Consensus 480 ~ 480 (535)
T PRK09605 480 I 480 (535)
T ss_pred h
Confidence 3
No 416
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.77 E-value=7e-19 Score=140.16 Aligned_cols=146 Identities=24% Similarity=0.387 Sum_probs=124.1
Q ss_pred CCCceeeeeeeeccccceEEEEEEecC---CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEec
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQE---EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRD 97 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~ 97 (219)
...+.++.+++||+|.|+.||+|.+.. ..+.||+|.+.... ...++.+|++.+..+. +.||+++.+.+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts------~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS------SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc------CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 345667899999999999999999877 78899999877432 2367889999998885 7899999988844
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
+ +...+++||++.....++.. .++...+..+++.++.||.++|.++ |+|||+||.|++.+...+.-.|.|||+
T Consensus 107 n--d~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~G--IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 107 N--DQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNG--IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred C--CeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccC--ccccCCCccccccccccCCceEEechh
Confidence 4 45778999999888877765 4678889999999999999999999 999999999999997777778999999
Q ss_pred cee
Q 027788 178 AAI 180 (219)
Q Consensus 178 a~~ 180 (219)
|..
T Consensus 180 A~~ 182 (418)
T KOG1167|consen 180 AQR 182 (418)
T ss_pred HHH
Confidence 984
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.76 E-value=3.5e-17 Score=130.49 Aligned_cols=179 Identities=25% Similarity=0.359 Sum_probs=139.8
Q ss_pred eeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC-CceEEEEEEecCCCceEEE
Q 027788 27 GRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK-NIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 27 ~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~~~~~~~~~~~~~l 105 (219)
+.+.+.||.|.|+.||.+.+. ..+++|.+...... .......+.+|+.+++.+.|+ +++++.+.+... ...++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~~ 75 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLES-KSKEVERFLREIQILASLNHPPNIVKLYDFFQDE--GSLYL 75 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhcc-chhHHHHHHHHHHHHHHccCCcceeeEEEEEecC--CEEEE
Confidence 467789999999999999876 77899998865532 223467888999999999988 799999988433 34788
Q ss_pred EeccccCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 106 ITEVCTSGNLREYRKKHR---HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++++.++++.+++.... .+.......++.|++.++.++|..+ ++|||+||+|++++.....+++.|||.+....
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~--~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG--IIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 999999999997766554 6889999999999999999999999 99999999999998653258999999998665
Q ss_pred ccce------------eeeecccCccccCC--Cccccccceeeec
Q 027788 183 RAIR------------RIRCWGRRSSWRRS--CTMRITRSLWTYT 213 (219)
Q Consensus 183 ~~~~------------~~~~~~~~~~~~~~--~~~~~~~diws~g 213 (219)
.... ++..+.+|+..... ..+....|+||+|
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g 198 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLG 198 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHH
Confidence 4431 22222233333332 4666779999998
No 418
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=3e-18 Score=151.33 Aligned_cols=183 Identities=16% Similarity=0.200 Sum_probs=132.2
Q ss_pred ccCCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC---CCCceEEEEEE
Q 027788 19 ETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA---NKNIISLHYVW 95 (219)
Q Consensus 19 ~~~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~ 95 (219)
.....+.-+.|.+.||+|+||.||+|...+ |+.||+|+-+...... |+.=..++.+|+ -+.|+.+....
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-------fYI~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-------FYICLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee-------eeehHHHHHhhchhhhcchHHHHHHH
Confidence 344456666899999999999999999876 9999999876544321 111122223333 12233333333
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe------CCCCc
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN------GNTGQ 169 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~------~~~~~ 169 (219)
...+. =++++||.+.|+|.++++..+.+++..++.+..|++..+..||..+ |+|+||||+|+++. .+..-
T Consensus 764 ~~~~~--S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~--IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 764 VFQNA--SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG--IIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred ccCCc--ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc--eecccCCcceeEeecccCCCCcccc
Confidence 22332 3569999999999999998888999999999999999999999999 99999999999984 12224
Q ss_pred EEEeccccceeccccceeeee---cccCc----cccCCCccccccceeeec
Q 027788 170 VKIGDLGVAAIVGRAIRRIRC---WGRRS----SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 170 ~~l~dfg~a~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~diws~g 213 (219)
++|+|||.+..+..-..++.. |.+.. +...+++++...|.++++
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlA 890 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLA 890 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHH
Confidence 899999999887544333222 22211 457788888899998887
No 419
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.76 E-value=1.2e-17 Score=125.77 Aligned_cols=144 Identities=19% Similarity=0.162 Sum_probs=106.4
Q ss_pred ceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCC-----H-------------HHHHHHHHHHHHHHhhCCC
Q 027788 25 RYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDD-----P-------------AMIERLFSEVRLLKTLANK 86 (219)
Q Consensus 25 ~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-----~-------------~~~~~~~~E~~~l~~l~~~ 86 (219)
..+.+.+.||+|+||.||++.. .+|+.||+|++........ . ........|+.++.++.++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred chhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 3457789999999999999986 4799999998765321000 0 0112356788889888877
Q ss_pred C--ceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEe
Q 027788 87 N--IISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVN 164 (219)
Q Consensus 87 ~--i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~ 164 (219)
+ +.+.++. . ..+++|||+++++|...... .....++.+++.++.++|..+ ++|+||+|.|++++
T Consensus 94 ~i~v~~~~~~----~--~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~g--i~H~Dl~p~Nill~ 159 (198)
T cd05144 94 GFPVPKPIDW----N--RHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHG--IIHGDLSEFNILVD 159 (198)
T ss_pred CCCCCceeec----C--CceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCC--CCcCCCCcccEEEc
Confidence 4 3443332 1 24789999999888764321 345578889999999999999 99999999999998
Q ss_pred CCCCcEEEeccccceecccc
Q 027788 165 GNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 165 ~~~~~~~l~dfg~a~~~~~~ 184 (219)
.+ +.++|+|||.+......
T Consensus 160 ~~-~~~~liDfg~~~~~~~~ 178 (198)
T cd05144 160 DD-EKIYIIDWPQMVSTDHP 178 (198)
T ss_pred CC-CcEEEEECCccccCCCc
Confidence 65 58999999999766554
No 420
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.72 E-value=9.8e-17 Score=119.64 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=97.7
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHH---------------------HHHHHHHHHHhhCCCC-
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIE---------------------RLFSEVRLLKTLANKN- 87 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~---------------------~~~~E~~~l~~l~~~~- 87 (219)
.+.||+|+||.||.|.+. +++.||+|++........ .... ....|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFK-KRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchh-hhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 468999999999999876 889999999875322111 1101 1135666666665443
Q ss_pred -ceEEEEEEecCCCceEEEEeccccCCChHH-HHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCCCceEEe
Q 027788 88 -IISLHYVWRDEDRNTLNFITEVCTSGNLRE-YRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNCSNVFVN 164 (219)
Q Consensus 88 -i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~~nili~ 164 (219)
+.+.+... ..+++||+++++.+.. .+... .. ......++.+++.++.++|. .+ ++|+||+|+|++++
T Consensus 80 ~~~~~~~~~------~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~--ivH~Dl~p~Nili~ 149 (187)
T cd05119 80 PVPKPIDLN------RHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAG--LVHGDLSEYNILVD 149 (187)
T ss_pred CCCceEecC------CCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccC--cCcCCCChhhEEEE
Confidence 34444321 1478999998844321 11111 01 16678899999999999999 88 99999999999998
Q ss_pred CCCCcEEEeccccceecccc
Q 027788 165 GNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 165 ~~~~~~~l~dfg~a~~~~~~ 184 (219)
+ +.++++|||.+.....+
T Consensus 150 -~-~~~~liDfg~a~~~~~~ 167 (187)
T cd05119 150 -D-GKVYIIDVPQAVEIDHP 167 (187)
T ss_pred -C-CcEEEEECcccccccCc
Confidence 4 58999999999766553
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.66 E-value=1.1e-16 Score=125.28 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=117.5
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC----------CCceEE
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN----------KNIISL 91 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----------~~i~~~ 91 (219)
...+....++.||.|+++.||.+++..+++.+|+|+..... .......+.+++|.-....+.+ -.++..
T Consensus 9 ~~~r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 9 QRPRTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp --EEEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred CCceEEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 34556677788999999999999999999999999988766 3334456777777655544322 122222
Q ss_pred EEEEecCCC----------c-----eEEEEeccccCCChHHHHH---hCCCC--C--HHHHHHHHHHHHHHHHHHHhCCC
Q 027788 92 HYVWRDEDR----------N-----TLNFITEVCTSGNLREYRK---KHRHV--S--VKALKKWSKQILKGLNYLHTHEP 149 (219)
Q Consensus 92 ~~~~~~~~~----------~-----~~~lv~e~~~~g~L~~~~~---~~~~~--~--~~~~~~i~~qv~~~l~~lh~~~~ 149 (219)
++....+++ . ..+++|+.+. ++|.+++. ..... . ......+..|++..+++||..+
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G- 165 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG- 165 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-
Confidence 222221111 1 2356777774 68877643 22122 1 2223445689999999999999
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceecccccee-eee-cccCcccc--------CCCccccccceeeec--cccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR-IRC-WGRRSSWR--------RSCTMRITRSLWTYT--RLGC 217 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~-~~~-~~~~~~~~--------~~~~~~~~~diws~g--i~~~ 217 (219)
++|+||+|+|++++.+ |.++|.||+........... ... ..+|++.. ..-.++.+.|-|++| |+.+
T Consensus 166 -lVHgdi~~~nfll~~~-G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 166 -LVHGDIKPENFLLDQD-GGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp -EEEST-SGGGEEE-TT-S-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred -eEecccceeeEEEcCC-CCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999976 68999999887766554431 111 22344322 123466678999999 5555
Q ss_pred cC
Q 027788 218 AC 219 (219)
Q Consensus 218 ~c 219 (219)
-|
T Consensus 244 WC 245 (288)
T PF14531_consen 244 WC 245 (288)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 422
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=4.7e-15 Score=114.74 Aligned_cols=143 Identities=15% Similarity=0.158 Sum_probs=103.5
Q ss_pred eeec-cccceEEEEEEecCCCcEEEEEEeeeccc-----C----CCHHHHHHHHHHHHHHHhhCCCCc--eEEEEEEecC
Q 027788 31 ELLG-SGAVKKVYRAFDQEEGIEVAWNQVKLRTF-----C----DDPAMIERLFSEVRLLKTLANKNI--ISLHYVWRDE 98 (219)
Q Consensus 31 ~~ig-~g~~g~V~~a~~~~~~~~vavK~~~~~~~-----~----~~~~~~~~~~~E~~~l~~l~~~~i--~~~~~~~~~~ 98 (219)
..|| .|+.|.||.+... +..+++|.+..... . .+.....++.+|+.++..++++++ ++.++....+
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4576 7888888888653 67899998864211 0 011233567889999999998775 5666554322
Q ss_pred CCc--eEEEEeccccC-CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 99 DRN--TLNFITEVCTS-GNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 99 ~~~--~~~lv~e~~~~-g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
... ..++++|++++ .+|.+++... .++... +.+++.++.++|+.+ ++|+||||.||+++.+ +.++|+||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~~----~~~i~~~l~~lH~~G--I~HrDlkp~NILv~~~-~~v~LIDf 186 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-PLSEEQ----WQAIGQLIARFHDAG--VYHADLNAHNILLDPD-GKFWLIDF 186 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-CCCHHH----HHHHHHHHHHHHHCC--CCCCCCCchhEEEcCC-CCEEEEEC
Confidence 221 12489999986 6888877543 455443 568899999999999 9999999999999865 47999999
Q ss_pred ccceeccc
Q 027788 176 GVAAIVGR 183 (219)
Q Consensus 176 g~a~~~~~ 183 (219)
|.+....+
T Consensus 187 g~~~~~~~ 194 (239)
T PRK01723 187 DRGELRTP 194 (239)
T ss_pred CCcccCCC
Confidence 99987653
No 423
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=1.2e-16 Score=137.71 Aligned_cols=187 Identities=22% Similarity=0.296 Sum_probs=136.7
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecc-cCCCHHHH-HHHHHHHHHHHhhCCCCceEEEEEEecCC
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRT-FCDDPAMI-ERLFSEVRLLKTLANKNIISLHYVWRDED 99 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~-~~~~~E~~~l~~l~~~~i~~~~~~~~~~~ 99 (219)
....|.+.+..+|.|++|.|+.+......+..+.|.+..+. ........ ..+..|..+-..+.|+|++.....++...
T Consensus 315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~ 394 (601)
T KOG0590|consen 315 FSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID 394 (601)
T ss_pred cccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence 34667788889999999999988877777767766554220 11122222 22666777788899999988766664433
Q ss_pred CceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 100 RNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 100 ~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
. ..-.||||++ +|..++.....+....+..++.|++.|+.|+|..+ +.|||+|++|+++..+ +.+||+|||.+.
T Consensus 395 ~--~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G--iahrdlK~enll~~~~-g~lki~Dfg~~~ 468 (601)
T KOG0590|consen 395 G--ILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG--LAHRDLKLENLLVTEN-GILKIIDFGAAS 468 (601)
T ss_pred c--chhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC--ceeccCccccEEEecC-CceEEeecCcce
Confidence 2 3335999998 99998877667888999999999999999999999 9999999999999966 589999999887
Q ss_pred ecccccee-----eeecccC----ccccCCCccccc-cceeeecc
Q 027788 180 IVGRAIRR-----IRCWGRR----SSWRRSCTMRIT-RSLWTYTR 214 (219)
Q Consensus 180 ~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~-~diws~gi 214 (219)
...-+... ....|+. ++.+...+|++. .||||.||
T Consensus 469 vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~i 513 (601)
T KOG0590|consen 469 VFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGI 513 (601)
T ss_pred eeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccc
Confidence 76444332 1122221 244555666555 99999993
No 424
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.64 E-value=7.8e-17 Score=144.41 Aligned_cols=108 Identities=11% Similarity=0.121 Sum_probs=78.3
Q ss_pred eEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC---------------
Q 027788 102 TLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG--------------- 165 (219)
Q Consensus 102 ~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~--------------- 165 (219)
.++.++|++ +++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.
T Consensus 54 ~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g--IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~ 130 (793)
T PLN00181 54 SIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDS 130 (793)
T ss_pred hhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCC--eeeccCCchhEEEcccCcEEEeeccccCcc
Confidence 456678877 5699999865 346899999999999999999999999 999999999999953
Q ss_pred ---CCCcEEEeccccceeccccc----------------------eeeeecccCccccCCCccccccceeeec
Q 027788 166 ---NTGQVKIGDLGVAAIVGRAI----------------------RRIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 166 ---~~~~~~l~dfg~a~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
..+.+|++|||+++...... .++..+.+| +......++.++||||+|
T Consensus 131 ~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP-E~~~~~~~~~~sDVwSlG 202 (793)
T PLN00181 131 GSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP-EEDNGSSSNCASDVYRLG 202 (793)
T ss_pred cccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh-hhhccCCCCchhhhhhHH
Confidence 12356777787776432100 011113333 333445578889999999
No 425
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=6.4e-15 Score=105.37 Aligned_cols=136 Identities=20% Similarity=0.129 Sum_probs=105.6
Q ss_pred eeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC--CCceEEEEEEecCCCceEEEEe
Q 027788 30 NELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN--KNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.||+|.++.||++.... ..+++|....... ...+..|+..++.+++ .++.+++..... ++..++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK------GADREREVAILQLLARKGLPVPKVLASGES--DGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEecC--CeEEEEecCCCCc------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccEEEE
Confidence 4789999999999998643 6889998764321 3567889999999987 488888776643 35578899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHE-PCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~-~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|+++++.+..+ +......+..+++.++..+|... +.++|+|++|.|++++.. +.++++|||.+.....
T Consensus 73 e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~-~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 73 EWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG-KILGIIDWEYAGYGPP 141 (155)
T ss_pred EecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC-cEEEEEecccccCCCh
Confidence 99988777543 45566677889999999999742 239999999999999864 5899999999875443
No 426
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.57 E-value=3.5e-16 Score=130.68 Aligned_cols=175 Identities=18% Similarity=0.241 Sum_probs=139.7
Q ss_pred eccccceEEEEEE---ecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCCceEEEEec
Q 027788 33 LGSGAVKKVYRAF---DQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 33 ig~g~~g~V~~a~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
+|+|.||.|+.+. ....+..+|+|+.+.......... +...|..++...+ ||.++++...++.+.+ ++++.+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~t~~er~il~~~~~~~f~v~lhyafqt~~k--l~l~ld 77 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--HTKQERIILAFVHNTPFLVKLHYAFQTDGK--LYLILD 77 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc--ccccHHHHHhhccCCCceeeeeeeeccccc--hhHhhh
Confidence 6899999999653 345677899999887655433332 6677899999887 9999999988876665 666999
Q ss_pred cccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccccee-
Q 027788 109 VCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIRR- 187 (219)
Q Consensus 109 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~~- 187 (219)
+..+|.+...+.....+.+.........++.+++.+|..+ ++|+|+|++||+++.+ |.+++.|||+++........
T Consensus 78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~--iiyrd~k~enilld~~-Ghi~~tdfglske~v~~~~~c 154 (612)
T KOG0603|consen 78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG--IAYRDYKLENVLLLLE-GHIKLTDFGLSKEAVKEKIAC 154 (612)
T ss_pred hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH--HHHhcccccceeeccc-CccccCCchhhhHhHhhhhcc
Confidence 9999999988777778888888889999999999999999 9999999999999966 68999999999988766655
Q ss_pred -eeecccCccccCCCccccccceeeeccccc
Q 027788 188 -IRCWGRRSSWRRSCTMRITRSLWTYTRLGC 217 (219)
Q Consensus 188 -~~~~~~~~~~~~~~~~~~~~diws~gi~~~ 217 (219)
+.-+.+|+... +....+|-||+|+.++
T Consensus 155 gt~eymApEI~~---gh~~a~D~ws~gvl~f 182 (612)
T KOG0603|consen 155 GTYEYRAPEIIN---GHLSAADWWSFGVLAF 182 (612)
T ss_pred cchhhhhhHhhh---ccCCcccchhhhhhHH
Confidence 34444444333 4556789999996653
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.56 E-value=3.1e-16 Score=119.52 Aligned_cols=182 Identities=14% Similarity=0.229 Sum_probs=141.1
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+..+|.+...|.+|+|+... -.+++|+++++.. .......|..|...++-+.||||+.+++.|..+ +.+.++.
T Consensus 193 nl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~--t~risrdfneefp~lrifshpnilpvlgacnsp--pnlv~is 266 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQG--NDIVAKILNVREV--TARISRDFNEEFPALRIFSHPNILPVLGACNSP--PNLVIIS 266 (448)
T ss_pred hhhhhhccCCCcccccccccC--cchhhhhhhhhhc--chhhcchhhhhCcceeeecCCchhhhhhhccCC--CCceEee
Confidence 556788999999999998764 4688898887765 455567889999999999999999999999544 5678899
Q ss_pred ccccCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEE--Eeccccceeccc
Q 027788 108 EVCTSGNLREYRKKHRH--VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVK--IGDLGVAAIVGR 183 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~--~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~--l~dfg~a~~~~~ 183 (219)
.|+|.|+|...+..... .+..+..+++..++.|+.|||+..+.+..--|+..+++++.+. +.+ .+|--++.. ..
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedl-tarismad~kfsfq-e~ 344 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDL-TARISMADTKFSFQ-EV 344 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchh-hhheecccceeeee-cc
Confidence 99999999998875543 6778899999999999999999987777778999999998664 444 345444432 22
Q ss_pred cceeeeecccCccccCCCc--cccccceeeec--cccc
Q 027788 184 AIRRIRCWGRRSSWRRSCT--MRITRSLWTYT--RLGC 217 (219)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~--~~~~~diws~g--i~~~ 217 (219)
......+|.+|+-..+.++ ....+|+|||+ +|.+
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel 382 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWEL 382 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHh
Confidence 2346677888887666555 33459999999 6654
No 428
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.51 E-value=7e-15 Score=129.58 Aligned_cols=180 Identities=18% Similarity=0.185 Sum_probs=128.4
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceE
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTL 103 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~ 103 (219)
..+ .+.+.+|++.|=+|.+|.+. .| .|++|++-.+...-+-.....-..|+. ....++||++.+..+. ......
T Consensus 23 ~e~-~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~--~t~kAA 96 (1431)
T KOG1240|consen 23 VEC-HYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL--VTDKAA 96 (1431)
T ss_pred cce-eeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH--HhhHHH
Confidence 344 77789999999999999753 33 589999876543323333344444555 5677899999876553 333455
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
|++-+|.. .+|.+.++..+-+..-+..-++.|++.|+..+|..+ ++|||||.+|||+++- .++.|+||.--+.---
T Consensus 97 ylvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g--VcHGDIKsENILiTSW-NW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 97 YLVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG--VCHGDIKSENILITSW-NWLYLTDFASFKPTYL 172 (1431)
T ss_pred HHHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC--ccccccccceEEEeee-chhhhhcccccCCccC
Confidence 66888884 699998876655667777789999999999999999 9999999999999855 5899999976554322
Q ss_pred cc-------------eeeeecccCccccCCCc----------cccccceeeec
Q 027788 184 AI-------------RRIRCWGRRSSWRRSCT----------MRITRSLWTYT 213 (219)
Q Consensus 184 ~~-------------~~~~~~~~~~~~~~~~~----------~~~~~diws~g 213 (219)
++ .+..++-+||.+....+ ..++=||+|+|
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~G 225 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAG 225 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhh
Confidence 22 15556778887655331 34445677776
No 429
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.47 E-value=2.5e-12 Score=95.92 Aligned_cols=145 Identities=17% Similarity=0.117 Sum_probs=102.1
Q ss_pred eeeeccccceEEEEEEecC------CCcEEEEEEeeecccC---------CC---------HHHHHHHH----HHHHHHH
Q 027788 30 NELLGSGAVKKVYRAFDQE------EGIEVAWNQVKLRTFC---------DD---------PAMIERLF----SEVRLLK 81 (219)
Q Consensus 30 ~~~ig~g~~g~V~~a~~~~------~~~~vavK~~~~~~~~---------~~---------~~~~~~~~----~E~~~l~ 81 (219)
...||.|--+.||.|.... .+..+|+|+.+..... .+ ....+.+. +|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999997543 3579999998753311 01 11123344 7999998
Q ss_pred hhCC--CCceEEEEEEecCCCceEEEEeccccCCChHH-HHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCeeeeCCC
Q 027788 82 TLAN--KNIISLHYVWRDEDRNTLNFITEVCTSGNLRE-YRKKHRHVSVKALKKWSKQILKGLNYL-HTHEPCVIHRDLN 157 (219)
Q Consensus 82 ~l~~--~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~-~~~~~~~~~~~~~~~i~~qv~~~l~~l-h~~~~~i~h~dl~ 157 (219)
++.. -++.+++++. + -+++||++.+..+.. .+.. ..++.+....+..+++.++..+ |..+ ++|+||+
T Consensus 82 rl~~~Gv~vP~pi~~~--~----~~lvME~Ig~~~~~~~~Lkd-~~~~~~~~~~i~~~i~~~l~~l~H~~g--lVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVLK--K----HVLVMSFIGDDQVPAPKLKD-AKLNDEEMKNAYYQVLSMMKQLYKECN--LVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEec--C----CEEEEEEcCCCCccchhhhc-cccCHHHHHHHHHHHHHHHHHHHHhCC--eecCCCC
Confidence 8864 4555666542 2 256999997644422 2222 2345556677889999999988 8899 9999999
Q ss_pred CCceEEeCCCCcEEEeccccceeccccc
Q 027788 158 CSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 158 ~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+.||++. + +.+.++|||.+.....+.
T Consensus 153 ~~NIL~~-~-~~v~iIDF~qav~~~hp~ 178 (197)
T cd05146 153 EYNMLWH-D-GKVWFIDVSQSVEPTHPH 178 (197)
T ss_pred HHHEEEE-C-CcEEEEECCCceeCCCCC
Confidence 9999997 3 479999999998776654
No 430
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=6.9e-13 Score=111.08 Aligned_cols=147 Identities=20% Similarity=0.204 Sum_probs=93.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCC---CH-----------------------HHHH----------HHH
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD---DP-----------------------AMIE----------RLF 74 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~---~~-----------------------~~~~----------~~~ 74 (219)
+.||+|++|.||+|+ .++|+.||||+.+...... +. ...+ .+.
T Consensus 123 ~plasaSigQVh~A~-l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRAR-LVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEE-ecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 469999999999998 4689999999976432100 00 0000 134
Q ss_pred HHHHHHHhhC----CCCceEEEEEEecCCCceEEEEeccccCCChHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHhCC
Q 027788 75 SEVRLLKTLA----NKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKH-RHVSVKALKKWSKQILK-GLNYLHTHE 148 (219)
Q Consensus 75 ~E~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qv~~-~l~~lh~~~ 148 (219)
+|...+.++. +.+-+.+-.++..- ...-+++|||++|++|.+..... ...+. ..++.+++. .+..+|..+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEAGLDR---KALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhcCCCH---HHHHHHHHHHHHHHHHhCC
Confidence 4555555552 22222322222111 11246899999999998765432 12222 234444443 467789889
Q ss_pred CCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 149 PCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 149 ~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
++|+|++|.|++++.+ +.++++|||++..+....
T Consensus 278 --~~H~D~hPgNilv~~~-g~i~liDfG~~~~l~~~~ 311 (437)
T TIGR01982 278 --FFHADLHPGNIFVLKD-GKIIALDFGIVGRLSEED 311 (437)
T ss_pred --ceeCCCCcccEEECCC-CcEEEEeCCCeeECCHHH
Confidence 9999999999999855 689999999999887643
No 431
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.42 E-value=3.2e-13 Score=99.53 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=69.6
Q ss_pred CChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-eeee
Q 027788 113 GNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR-RIRC 190 (219)
Q Consensus 113 g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~-~~~~ 190 (219)
|+|.+++.. ...+++..+..++.|++.|+.|||+.+ ||+||+++.+ +.+++ ||++........ ++..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------kp~Nil~~~~-~~~~~--fG~~~~~~~~~~~g~~~ 69 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA--------KSGNILLTWD-GLLKL--DGSVAFKTPEQSRVDPY 69 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC--------CcccEeEcCc-cceee--ccceEeeccccCCCccc
Confidence 688888875 456999999999999999999999865 9999999855 57888 999987655432 2333
Q ss_pred cccCccccCCCccccccceeeecc
Q 027788 191 WGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 191 ~~~~~~~~~~~~~~~~~diws~gi 214 (219)
+.+| +......++.++||||+|+
T Consensus 70 y~aP-E~~~~~~~~~~~DiwSlG~ 92 (176)
T smart00750 70 FMAP-EVIQGQSYTEKADIYSLGI 92 (176)
T ss_pred ccCh-HHhcCCCCcchhhHHHHHH
Confidence 3343 4455667888999999993
No 432
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39 E-value=3.5e-12 Score=93.47 Aligned_cols=131 Identities=21% Similarity=0.124 Sum_probs=92.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCc-eEEEEEEecCCCceEEEEecc
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNI-ISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~e~ 109 (219)
+.++.|.++.||+++.. +..+++|....... ....+.+|+.+++.+.+.++ .+++... ... -+++||+
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-----~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~--~~lv~e~ 72 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-----LLINRENEAENSKLAAEAGIGPKLYYFD--PET--GVLITEF 72 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCcc-----cccCHHHHHHHHHHHHHhCCCCceEEEe--CCC--CeEEEEe
Confidence 56889999999998754 77899998653321 11235678999988865444 3454443 222 2579999
Q ss_pred ccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCC---CeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 110 CTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEP---CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 110 ~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~---~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
+++.++... . ......+.+++.++..||..+. .++|+|+++.|++++ + +.++++||+.+..-.
T Consensus 73 i~G~~l~~~-----~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~-~~~~liDf~~a~~~~ 138 (170)
T cd05151 73 IEGSELLTE-----D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D-GRLWLIDWEYAGMND 138 (170)
T ss_pred cCCCccccc-----c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C-CeEEEEecccccCCC
Confidence 998777542 0 1113356788899999998861 249999999999998 4 369999999987543
No 433
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.37 E-value=1.3e-12 Score=111.06 Aligned_cols=145 Identities=14% Similarity=0.188 Sum_probs=89.3
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC--------------------C-----C-H----HHHHH------HH
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--------------------D-----D-P----AMIER------LF 74 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--------------------~-----~-~----~~~~~------~~ 74 (219)
+.||+|++|.||+|+...+|+.||||+....... + + . ...+. +.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 5799999999999998777999999998743200 0 0 0 11122 33
Q ss_pred HHHHHHHhhC----CCCceEEEEEEecCCCceEEEEeccccCCChHHHH--HhCC----CCCHHHHHHHHHHHHHHHHHH
Q 027788 75 SEVRLLKTLA----NKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYR--KKHR----HVSVKALKKWSKQILKGLNYL 144 (219)
Q Consensus 75 ~E~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~--~~~~----~~~~~~~~~i~~qv~~~l~~l 144 (219)
+|...+.++. +.+.+.+-.++.+- ...-+++|||++|+.+.+.- ...+ .+.+..+..++.|+
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------- 276 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------- 276 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------
Confidence 4444444442 23223322222110 11246799999999997642 2222 12222233333443
Q ss_pred HhCCCCeeeeCCCCCceEEeCCC---CcEEEeccccceeccccc
Q 027788 145 HTHEPCVIHRDLNCSNVFVNGNT---GQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 145 h~~~~~i~h~dl~~~nili~~~~---~~~~l~dfg~a~~~~~~~ 185 (219)
...+ ++|+|+||.||+++.+. +.++++|||+...+....
T Consensus 277 f~~G--ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~ 318 (537)
T PRK04750 277 FRDG--FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKED 318 (537)
T ss_pred HhCC--eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHH
Confidence 4568 99999999999998652 279999999999887654
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=9.6e-13 Score=113.77 Aligned_cols=188 Identities=17% Similarity=0.234 Sum_probs=135.4
Q ss_pred CCceeeeeeeeccccceEEEEEEec-CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecCCC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQ-EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDEDR 100 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~ 100 (219)
...| ++.+-||+|+|+.|-.+... .....+|+|.+.... .......+...|..+.+.+. |.|++.+++.. .+.
T Consensus 19 ~~~~-~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~--~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~--~~~ 93 (601)
T KOG0590|consen 19 NSQY-KLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP--KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS--SSP 93 (601)
T ss_pred cccc-cccccccccccchhhhhhhcCCCcceeeccCCCCCC--CccchhhhcCccccccccccccccccccCCcc--CCC
Confidence 3444 77788999999999988764 334557777665443 24455577778898888888 99999998877 445
Q ss_pred ceEEEEeccccCCChHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-hCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 101 NTLNFITEVCTSGNLREYR-KKHR-HVSVKALKKWSKQILKGLNYLH-THEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~-~~~~-~~~~~~~~~i~~qv~~~l~~lh-~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
...++.+++..++++..-+ .... ..+....-..+.|+..++.|+| ..+ +.|+|++|+|.+++.....++++|||+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~--~~h~~ikP~n~~l~~s~~~l~~~df~~ 171 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG--VTHRDIKPSNSLLDESGSALKIADFGL 171 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc--cccCCCCCccchhccCCCcccCCCchh
Confidence 5677799999899998877 4333 5667777888999999999999 888 999999999999985522789999999
Q ss_pred ceeccc-cce---eeeecc-cCc----cccCCCcc-ccccceeeeccccc
Q 027788 178 AAIVGR-AIR---RIRCWG-RRS----SWRRSCTM-RITRSLWTYTRLGC 217 (219)
Q Consensus 178 a~~~~~-~~~---~~~~~~-~~~----~~~~~~~~-~~~~diws~gi~~~ 217 (219)
|..+.. ... .....| .++ ++.....+ ..+-|+||.|+...
T Consensus 172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~ 221 (601)
T KOG0590|consen 172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLS 221 (601)
T ss_pred hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccc
Confidence 988876 222 111222 222 23333233 34489999996543
No 435
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.27 E-value=2.4e-10 Score=83.11 Aligned_cols=150 Identities=19% Similarity=0.258 Sum_probs=104.4
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC-C---CHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-D---DPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFI 106 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~---~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 106 (219)
..+-+|+-++|+++.+ .|+...||.=..+.+. + ..=..++..+|+..+.++.--.|.-..-++.+...+ .+.
T Consensus 13 ~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~--~i~ 88 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGG--QIY 88 (229)
T ss_pred eeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCC--eEE
Confidence 5778999999999965 5777777752222221 1 112346778899999888654444333344444443 459
Q ss_pred eccccC-CChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcE--EEeccccceec
Q 027788 107 TEVCTS-GNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQV--KIGDLGVAAIV 181 (219)
Q Consensus 107 ~e~~~~-g~L~~~~~~~~--~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~--~l~dfg~a~~~ 181 (219)
||++++ .++.+++...- .........++.++-..+.-||.++ ++|+||..+|+++.++..++ .++|||++...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd--iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND--IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC--eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999975 47778776542 2223333678888888899999999 99999999999998665544 78999999887
Q ss_pred cccce
Q 027788 182 GRAIR 186 (219)
Q Consensus 182 ~~~~~ 186 (219)
..++.
T Consensus 167 ~~~ED 171 (229)
T KOG3087|consen 167 RLPED 171 (229)
T ss_pred cCccc
Confidence 66654
No 436
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=3.8e-10 Score=82.19 Aligned_cols=138 Identities=17% Similarity=0.213 Sum_probs=95.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC-CCH--H-HHHHHHHHHHHHHhhCCC--CceEEEEEEecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DDP--A-MIERLFSEVRLLKTLANK--NIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~--~-~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~~~~~~~ 104 (219)
..+.+|+-+.+|.+... |..+.+|.=..+... +.. . ...+..+|+.++.++.-- +...++++. ++. ..
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~--~~ 75 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDN--GL 75 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCC--CE
Confidence 35788999999988653 334666652222221 111 1 225567899999887643 333444443 332 45
Q ss_pred EEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 105 FITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 105 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
++|||.+|..|.+.+... ...++..+-.-+.-||..+ |+|+||.++|+++..+ .+.++|||++......
T Consensus 76 I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~g--ivHGDLTtsNiIl~~~--~i~~IDfGLg~~s~~~ 144 (204)
T COG3642 76 IVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAG--IVHGDLTTSNIILSGG--RIYFIDFGLGEFSDEV 144 (204)
T ss_pred EEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcC--eecCCCccceEEEeCC--cEEEEECCcccccccH
Confidence 699999988888887754 2456666767788899999 9999999999999744 5999999999876554
Q ss_pred c
Q 027788 185 I 185 (219)
Q Consensus 185 ~ 185 (219)
+
T Consensus 145 E 145 (204)
T COG3642 145 E 145 (204)
T ss_pred H
Confidence 4
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=7.7e-11 Score=94.66 Aligned_cols=126 Identities=21% Similarity=0.245 Sum_probs=86.2
Q ss_pred CCCCceEEEEEEecC-------------------------CCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHH
Q 027788 84 ANKNIISLHYVWRDE-------------------------DRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQIL 138 (219)
Q Consensus 84 ~~~~i~~~~~~~~~~-------------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~ 138 (219)
.||||+++...|.++ ....+|++|..++ -+|..++... ..+......++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHHH
Confidence 589999987666421 2346788999886 4888877643 455666777899999
Q ss_pred HHHHHHHhCCCCeeeeCCCCCceEEeCCC---CcEEEeccccceeccccc------------eeeeecccCccccCCCc-
Q 027788 139 KGLNYLHTHEPCVIHRDLNCSNVFVNGNT---GQVKIGDLGVAAIVGRAI------------RRIRCWGRRSSWRRSCT- 202 (219)
Q Consensus 139 ~~l~~lh~~~~~i~h~dl~~~nili~~~~---~~~~l~dfg~a~~~~~~~------------~~~~~~~~~~~~~~~~~- 202 (219)
+++.+||.++ +.|||+|.+||++..+. ..+.++|||.+-.-.... .+..+.-+|+....-+.
T Consensus 352 Eav~hL~~hg--vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 352 EAVTHLHKHG--VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHHcc--chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 9999999999 99999999999985322 346789999764322211 13334444543322221
Q ss_pred ----cccccceeeec
Q 027788 203 ----MRITRSLWTYT 213 (219)
Q Consensus 203 ----~~~~~diws~g 213 (219)
.-.++|.|+-|
T Consensus 430 ~avvny~kAD~WA~G 444 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAG 444 (598)
T ss_pred ceeeccchhhhhhhh
Confidence 12368999888
No 438
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.15 E-value=7e-10 Score=84.57 Aligned_cols=147 Identities=18% Similarity=0.227 Sum_probs=98.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCC--CceEEEEEEecCC-CceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANK--NIISLHYVWRDED-RNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~~~~-~~~~~lv~ 107 (219)
+.|+.|.++.+|+++.. +|..+++|....... ......+..|.++++.+.+. .+.+++.+..... .+..+++|
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~---~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGAL---LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCccc---CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence 56889999999999864 367899998654321 11235678899999998763 3456665553221 12457899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTH---------------------------------------- 147 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~---------------------------------------- 147 (219)
|++++.++...+.. ..++......++.+++..+..||+.
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99998777653321 2355555556666666666666632
Q ss_pred --------------CCCeeeeCCCCCceEEeCC-CCcEEEeccccceecc
Q 027788 148 --------------EPCVIHRDLNCSNVFVNGN-TGQVKIGDLGVAAIVG 182 (219)
Q Consensus 148 --------------~~~i~h~dl~~~nili~~~-~~~~~l~dfg~a~~~~ 182 (219)
...++|+|+++.|++++.+ .+.+.++||+.+..-.
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~ 208 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD 208 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence 1247999999999999863 3457899999887543
No 439
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.14 E-value=1.7e-09 Score=80.40 Aligned_cols=132 Identities=24% Similarity=0.232 Sum_probs=81.6
Q ss_pred EEEEEecCCCcEEEEEEeeecccC---------------------CCH-HHHHHHHHHHHHHHhhCCC--CceEEEEEEe
Q 027788 41 VYRAFDQEEGIEVAWNQVKLRTFC---------------------DDP-AMIERLFSEVRLLKTLANK--NIISLHYVWR 96 (219)
Q Consensus 41 V~~a~~~~~~~~vavK~~~~~~~~---------------------~~~-~~~~~~~~E~~~l~~l~~~--~i~~~~~~~~ 96 (219)
||.|.. .+|..+|+|+....... ... -......+|...|.++..- ++.+++++.
T Consensus 2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 788875 46789999998763211 011 1224467899999999765 466666543
Q ss_pred cCCCceEEEEecccc--CCChHHHHHhCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 97 DEDRNTLNFITEVCT--SGNLREYRKKHRHVSVKALKKWSKQILKGLN-YLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 97 ~~~~~~~~lv~e~~~--~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~-~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
++ .++|||++ |..+..+.... ++.+....++.+++..+. .+|..+ ++|+||++.||+++.+ .+.++
T Consensus 80 -~~----~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~g--ivHGDLs~~NIlv~~~--~~~iI 148 (188)
T PF01163_consen 80 -RN----VIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAG--IVHGDLSEYNILVDDG--KVYII 148 (188)
T ss_dssp -TT----EEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTT--EEESS-STTSEEEETT--CEEE-
T ss_pred -CC----EEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcC--ceecCCChhhEEeecc--eEEEE
Confidence 32 57999998 65665543321 113344556666666444 457889 9999999999999854 79999
Q ss_pred ccccceeccccc
Q 027788 174 DLGVAAIVGRAI 185 (219)
Q Consensus 174 dfg~a~~~~~~~ 185 (219)
|||.+.....+.
T Consensus 149 Df~qav~~~~p~ 160 (188)
T PF01163_consen 149 DFGQAVDSSHPN 160 (188)
T ss_dssp -GTTEEETTSTT
T ss_pred ecCcceecCCcc
Confidence 999998766543
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.12 E-value=3.7e-10 Score=95.97 Aligned_cols=128 Identities=26% Similarity=0.273 Sum_probs=100.6
Q ss_pred EEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccCCChHHHHHhC
Q 027788 43 RAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKH 122 (219)
Q Consensus 43 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~ 122 (219)
.|..+.++.+|.|..++.... ...+...+-++.++-++||||+++++.+ +....+|+++|.+. .|...+..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~----~~~~~~~~A~k~lKtlRHP~Il~yL~t~--e~~~~~ylvTErV~--Pl~~~lk~- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG----EVTELAKRAVKRLKTLRHPNILSYLDTT--EEEGTLYLVTERVR--PLETVLKE- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCc----hhhHHHHHHHHHhhhccCchhhhhhhhh--cccCceEEEeeccc--cHHHHHHH-
Confidence 466678889999998875532 3335566788899999999999999988 44457899999983 56655553
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH-hCCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 123 RHVSVKALKKWSKQILKGLNYLH-THEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 123 ~~~~~~~~~~i~~qv~~~l~~lh-~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+....+.-.+.||+.||.||| .++ ++|+++..+.++++.. |.-+|.+|.++......
T Consensus 101 --l~~~~v~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~-GeWkLggle~v~~~~~~ 158 (690)
T KOG1243|consen 101 --LGKEEVCLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNES-GEWKLGGLELVSKASGF 158 (690)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCC-CcEEEeeeEEEeccccC
Confidence 336667778999999999998 556 9999999999999966 68999999988665443
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.11 E-value=9.3e-11 Score=97.89 Aligned_cols=130 Identities=20% Similarity=0.366 Sum_probs=99.7
Q ss_pred HhhCCCCceEEEEEEecCCCceEEEEeccccCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCe-eeeCCCC
Q 027788 81 KTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKK-HRHVSVKALKKWSKQILKGLNYLHTHEPCV-IHRDLNC 158 (219)
Q Consensus 81 ~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i-~h~dl~~ 158 (219)
+.+.|.|+.++.+.+... ..++++.++|..|+|.+.+.. ...++......+++.++.|+.|+|... + .|+.|+.
T Consensus 2 ~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 2 RQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred cccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 567899999999999765 557789999999999998876 456888889999999999999999766 4 9999999
Q ss_pred CceEEeCCCCcEEEeccccceeccccc--------eeeeecccCccccC---CC---ccccccceeeeccc
Q 027788 159 SNVFVNGNTGQVKIGDLGVAAIVGRAI--------RRIRCWGRRSSWRR---SC---TMRITRSLWTYTRL 215 (219)
Q Consensus 159 ~nili~~~~~~~~l~dfg~a~~~~~~~--------~~~~~~~~~~~~~~---~~---~~~~~~diws~gi~ 215 (219)
.|++++... .+|++|||+........ .....|-+|+-... .. ..+.++|++|+||.
T Consensus 78 ~nClvd~~w-~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii 147 (484)
T KOG1023|consen 78 SNCLVDSRW-VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGII 147 (484)
T ss_pred ccceeeeeE-EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHH
Confidence 999999776 79999999998875311 12223334432111 11 14556999999943
No 442
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=7e-12 Score=98.23 Aligned_cols=160 Identities=38% Similarity=0.726 Sum_probs=111.8
Q ss_pred CCCCccccCCCCceeeeeeeeccc---cceEEEEEEecCCCcEEEEEEeeecccCCCHHHH-HHHHHHHHHHHhhCCCCc
Q 027788 13 DSEPFIETDPTGRYGRYNELLGSG---AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMI-ERLFSEVRLLKTLANKNI 88 (219)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~ig~g---~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~-~~~~~E~~~l~~l~~~~i 88 (219)
+.....+..|.+++.+-....|+. +.-.||.+.+...|.+|....+...... ++... +....-...+-++-|.|+
T Consensus 51 ~~~eIleesp~~rw~krreqv~qrdvPgid~v~lamd~e~g~evvwneVq~~~rK-~~~~qeek~~~vFdnllqlvHsnl 129 (458)
T KOG1266|consen 51 DESEILEESPCGRWGKRREQVGQRDVPGIDDVYLAMDTEEGVEVVWNEVQFSERK-NPKEQEEKRRAVFDNLLQLVHSNL 129 (458)
T ss_pred chhhhhccCchhhhhhhhhhccCCCCCchHHHHHHhhhccCchhhHHHHHHHHhc-ChhhCHHHHHHHHHHHHHHHHHHH
Confidence 344455666777776666666653 3456777777777777776554432211 11111 111222334556678999
Q ss_pred eEEEEEEec---CCCceEEEEeccccCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCce
Q 027788 89 ISLHYVWRD---EDRNTLNFITEVCTSGNLREYRKKH----RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNV 161 (219)
Q Consensus 89 ~~~~~~~~~---~~~~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~ni 161 (219)
++++.+|.+ ++.....+++||+..|++.++++.. ..+......+|+.||+.||.|||+..|+++|+++..+.+
T Consensus 130 vkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~ti 209 (458)
T KOG1266|consen 130 VKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTI 209 (458)
T ss_pred HHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhhe
Confidence 999888854 3445667899999999999998643 347788899999999999999999999999999999999
Q ss_pred EEeCCCCcEEEec
Q 027788 162 FVNGNTGQVKIGD 174 (219)
Q Consensus 162 li~~~~~~~~l~d 174 (219)
++..+ |-+|+.-
T Consensus 210 fiq~n-gLIkig~ 221 (458)
T KOG1266|consen 210 FIQHN-GLIKIGS 221 (458)
T ss_pred eecCC-ceEEecc
Confidence 99855 5667643
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.00 E-value=9.2e-10 Score=92.28 Aligned_cols=184 Identities=15% Similarity=0.135 Sum_probs=129.4
Q ss_pred CCceeeeeeeeccccceEEEEEEec-CCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh-CCCCceEEEEEEecCCC
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQ-EEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL-ANKNIISLHYVWRDEDR 100 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~~~~ 100 (219)
.+.+ .+...||.+.|+.|+..... .++..|++|.+....... .+.+. -..|+-+...+ .|.+++..+..|..-++
T Consensus 264 ~~df-~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 264 LTDF-GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIF-SLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred cCCc-ceeEEccCCccccceeeeecCCCCceEeChhhhccccch-Hhhhc-chhhhhHhhHhhcccccCCCCCCcccccc
Confidence 3455 45588999999999987644 678889999877554321 11111 12344444444 47777776666654433
Q ss_pred ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 101 NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++-.|+|.++++...+.....+++...+++..|++.++.++|... ++|+|++|+||++..+.+..++.||+.+..
T Consensus 341 --~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~--~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 341 --GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL--FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred --ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh--hhcccccccceeeccchhhhhccccccccc
Confidence 4579999998888766544456888999999999999999999998 999999999999985435678999998875
Q ss_pred ccccce--eeeeccc--CccccCCCccccccceeeec
Q 027788 181 VGRAIR--RIRCWGR--RSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~--~~~~~~~--~~~~~~~~~~~~~~diws~g 213 (219)
+..... ....+.. .+......++..+.|++|||
T Consensus 417 ~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~ 453 (524)
T KOG0601|consen 417 LAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLG 453 (524)
T ss_pred cceecccccccccccccchhhcccccccccccccccc
Confidence 433221 2222222 34456677778889999999
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.98 E-value=2.7e-10 Score=100.92 Aligned_cols=141 Identities=18% Similarity=0.285 Sum_probs=89.2
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
...+.|..|+||.||..+++.+.+++|+|+ +++.. +.+. ++....+|. +|
T Consensus 86 ~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l---------ilRn--ilt~a~npf-----------------vv- 135 (1205)
T KOG0606|consen 86 NTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL---------ILRN--ILTFAGNPF-----------------VV- 135 (1205)
T ss_pred ceeEeeccCCCCceeeeeccccccchhhcc-cccch---------hhhc--cccccCCcc-----------------ee-
Confidence 455899999999999999999999999954 42211 1110 111112221 12
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccce-
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAIR- 186 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~~- 186 (219)
|+-..++..-+.++.+. +.+++|+|+.+ |+|||+||+|.+|+.- |.+|+.|||+++..--...
T Consensus 136 -----gDc~tllk~~g~lPvdm--------vla~Eylh~yg--ivhrdlkpdnllIT~m-GhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGPLPVDM--------VLAVEYLHSYG--IVHRDLKPDNLLITSM-GHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred -----chhhhhcccCCCCcchh--------hHHhHhhccCC--eecCCCCCCcceeeec-ccccccchhhhhhhhhhccc
Confidence 23333333333343333 67899999999 9999999999999855 7999999999875421110
Q ss_pred ---------------eeeecccCc----cccCCCccccccceeeecc
Q 027788 187 ---------------RIRCWGRRS----SWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 187 ---------------~~~~~~~~~----~~~~~~~~~~~~diws~gi 214 (219)
....+++|+ ++..-..|.-+-|-|+|||
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGi 246 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGI 246 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHH
Confidence 111233333 2233445666789999993
No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.95 E-value=4.7e-08 Score=76.81 Aligned_cols=140 Identities=14% Similarity=0.078 Sum_probs=90.3
Q ss_pred cceEEEEEEecCCCcEEEEEEeeecccCC---C---H-HHHHHHHHHHHHHHhhCCCCce--EEEEEEecC-C--CceEE
Q 027788 37 AVKKVYRAFDQEEGIEVAWNQVKLRTFCD---D---P-AMIERLFSEVRLLKTLANKNII--SLHYVWRDE-D--RNTLN 104 (219)
Q Consensus 37 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~---~---~-~~~~~~~~E~~~l~~l~~~~i~--~~~~~~~~~-~--~~~~~ 104 (219)
....|.+.+ -.|+.+.+|......... . . .-...+.+|...+.++..-+|. ++..+.... + ...-+
T Consensus 34 ~~rrvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 34 EGRRTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred CCceEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeE
Confidence 334455543 245678888653222100 0 0 0001366788888877543333 333333111 1 12346
Q ss_pred EEeccccCC-ChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC------CCCcEEEecc
Q 027788 105 FITEVCTSG-NLREYRKK--HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG------NTGQVKIGDL 175 (219)
Q Consensus 105 lv~e~~~~g-~L~~~~~~--~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~------~~~~~~l~df 175 (219)
++||++++. +|.+++.. ....+......++.+++..+.-||..+ ++|+||++.||+++. +...+.++||
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G--i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG--INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc--CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 899999875 78888753 234566777789999999999999999 999999999999974 2347899999
Q ss_pred cccee
Q 027788 176 GVAAI 180 (219)
Q Consensus 176 g~a~~ 180 (219)
+.+..
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98864
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=7.7e-10 Score=92.76 Aligned_cols=183 Identities=18% Similarity=0.226 Sum_probs=130.1
Q ss_pred Cceeeeeeeecc--ccceEEEEEEe--cCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCceEEEEEEecC
Q 027788 24 GRYGRYNELLGS--GAVKKVYRAFD--QEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNIISLHYVWRDE 98 (219)
Q Consensus 24 ~~~~~~~~~ig~--g~~g~V~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~ 98 (219)
.+.+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... .+....+-++|....+.+. |+|.++.+..+ +
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s--~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~--e 188 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS--PPLDSKRKLREFLSHHKIDSHENPVRDSPAW--E 188 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC--CccccccccchhhcccccCccccccccCccc--c
Confidence 344466678999 99999999887 78889999997443322 2333344456777776664 88888877777 5
Q ss_pred CCceEEEEeccccCCChHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEe
Q 027788 99 DRNTLNFITEVCTSGNLREYRKKHRH-VSVKALKKWSKQILK----GLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIG 173 (219)
Q Consensus 99 ~~~~~~lv~e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qv~~----~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~ 173 (219)
+...+++.+|.+. .+|..+...... +....+...+.+... |+..+|... ++|.|++|+|+++..+....++.
T Consensus 189 ~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~--~~~~~~kp~~i~~~~~~~s~~~~ 265 (524)
T KOG0601|consen 189 GSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN--IVHDDLKPANIFTTSDWTSCKLT 265 (524)
T ss_pred cCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc--ccccccchhheecccccceeecC
Confidence 6677888999985 677666543323 566666666666666 999999999 99999999999998775578999
Q ss_pred ccccceeccccceeeeec--ccCc-------cccCCCccccccceeeec
Q 027788 174 DLGVAAIVGRAIRRIRCW--GRRS-------SWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 174 dfg~a~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~diws~g 213 (219)
|||+...+.........- -.++ +......+...+|++|+|
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ 314 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLG 314 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchh
Confidence 999988886655211111 0111 223455567779999999
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.80 E-value=9.1e-10 Score=91.10 Aligned_cols=108 Identities=22% Similarity=0.346 Sum_probs=82.8
Q ss_pred ceEEEEeccccCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 101 NTLNFITEVCTSGNLREYRKKHR---HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.++++.|++|...+|.+++...+ .-+......+..|++.++.| ++ .+|+|+||.||++..+ ..++|.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~--~ihrdlkp~nif~~~d-~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG--LIHRDLKPSNIFFSDD-DQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc--chhhhccccccccccc-hhhhhhhhhh
Confidence 36889999999999999986432 45677888899999999999 67 8999999999998755 4799999999
Q ss_pred ceeccccce-------eee----ecccCccccCCCccccccceeeecc
Q 027788 178 AAIVGRAIR-------RIR----CWGRRSSWRRSCTMRITRSLWTYTR 214 (219)
Q Consensus 178 a~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~diws~gi 214 (219)
........+ .+. .++..++......|..+.||+|||+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGl 450 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGL 450 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHH
Confidence 987766551 111 1222223345566889999999994
No 448
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.74 E-value=8.9e-08 Score=72.56 Aligned_cols=111 Identities=20% Similarity=0.198 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHhhCCCCc--eEEEEEEecCC--CceEEEEeccccCC-ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Q 027788 71 ERLFSEVRLLKTLANKNI--ISLHYVWRDED--RNTLNFITEVCTSG-NLREYRKKHRHVSVKALKKWSKQILKGLNYLH 145 (219)
Q Consensus 71 ~~~~~E~~~l~~l~~~~i--~~~~~~~~~~~--~~~~~lv~e~~~~g-~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh 145 (219)
.+..+|...+..|..-.| .+.+++..... ...-++++|++++. +|.+++......+......++.+++..+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 456678888777754333 33444332211 12346899999864 78888876545677778889999999999999
Q ss_pred hCCCCeeeeCCCCCceEEeCCC--CcEEEeccccceeccc
Q 027788 146 THEPCVIHRDLNCSNVFVNGNT--GQVKIGDLGVAAIVGR 183 (219)
Q Consensus 146 ~~~~~i~h~dl~~~nili~~~~--~~~~l~dfg~a~~~~~ 183 (219)
..+ ++|+|+++.|||++.+. ..+.++||+.++....
T Consensus 136 ~~g--i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~ 173 (206)
T PF06293_consen 136 DAG--IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS 173 (206)
T ss_pred HCc--CCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence 999 99999999999998653 2578999998877553
No 449
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.74 E-value=1.4e-07 Score=78.57 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=109.4
Q ss_pred cceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEec--CCCceEEEEeccccC-C
Q 027788 37 AVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRD--EDRNTLNFITEVCTS-G 113 (219)
Q Consensus 37 ~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~~~~lv~e~~~~-g 113 (219)
...+.|+|+...+|-.|++|.++-...... .....-++.++++.|+|++.+.++|.. -+...+++|++|+|+ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~----nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST----NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc----ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 557899999999999999999954332221 111235778899999999999888862 233578899999975 4
Q ss_pred ChHHH-HHh--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 114 NLREY-RKK--------------HRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 114 ~L~~~-~~~--------------~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+|.++ +.. ....++..++.++.|+..||.++|+.| +..+-|.+.+|+++.+. +++|+..|..
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG--LAck~L~~~kIlv~G~~-RIriS~C~i~ 440 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG--LACKTLDLKKILVTGKM-RIRISGCGIM 440 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC--ceeecccHhHeEeeCcc-eEEEecccce
Confidence 66553 211 123678999999999999999999999 98999999999998764 7999998888
Q ss_pred eeccccc
Q 027788 179 AIVGRAI 185 (219)
Q Consensus 179 ~~~~~~~ 185 (219)
..+..+.
T Consensus 441 Dvl~~d~ 447 (655)
T KOG3741|consen 441 DVLQEDP 447 (655)
T ss_pred eeecCCC
Confidence 7776654
No 450
>PRK09902 hypothetical protein; Provisional
Probab=98.67 E-value=1.3e-06 Score=65.80 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=95.5
Q ss_pred ccccceEEEEEEecCCCcEEEEEEeeecccC--CCHHHHHHHHHHHHHHHhhCCCC--ceEEE--EEEecCCCceEEEEe
Q 027788 34 GSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--DDPAMIERLFSEVRLLKTLANKN--IISLH--YVWRDEDRNTLNFIT 107 (219)
Q Consensus 34 g~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~--i~~~~--~~~~~~~~~~~~lv~ 107 (219)
|.|+.+.|++-... |..+=+|.-...... .-+.-...|.+|...+++|..-+ +.++. +.-.......-+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 45777888876532 334666653311100 00222355788999888886433 33333 111222233456799
Q ss_pred ccccC-CChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCc--EEEeccccceecc
Q 027788 108 EVCTS-GNLREYRKKH--RHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQ--VKIGDLGVAAIVG 182 (219)
Q Consensus 108 e~~~~-g~L~~~~~~~--~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~--~~l~dfg~a~~~~ 182 (219)
|.+++ .+|.+++... .+.+......+..+++..+.-||+.+ +.|+|+.+.||+++.+ +. ++++||+-++..-
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G--v~Hgdly~khIll~~~-g~~~v~lIDlEk~r~~l 181 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN--RQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRRRL 181 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHhheeecCC-CCeeEEEEEhhccchhh
Confidence 98853 4888877543 34577777889999999999999999 9999999999999744 35 8999999887654
Q ss_pred c
Q 027788 183 R 183 (219)
Q Consensus 183 ~ 183 (219)
.
T Consensus 182 ~ 182 (216)
T PRK09902 182 R 182 (216)
T ss_pred h
Confidence 3
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.57 E-value=6.7e-07 Score=69.24 Aligned_cols=147 Identities=19% Similarity=0.175 Sum_probs=99.1
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC----------------CC--HHHHHHHHHHHHHHHhhCC
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC----------------DD--PAMIERLFSEVRLLKTLAN 85 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~----------------~~--~~~~~~~~~E~~~l~~l~~ 85 (219)
+-...++..||-|--+.||.|.+. .|.++|+|.-..-... .+ .-......+|.+.|++|..
T Consensus 90 ~~ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~ 168 (304)
T COG0478 90 GIVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP 168 (304)
T ss_pred ChHHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh
Confidence 445577889999999999999865 7889999985432110 00 0122334578889988875
Q ss_pred C--CceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEE
Q 027788 86 K--NIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFV 163 (219)
Q Consensus 86 ~--~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili 163 (219)
. .+.+.+++- .-.++||+.+|-.|.... ++.+....++..|+..+.-+-..+ ++|+|++.-||++
T Consensus 169 ~G~~VP~P~~~n------RHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~G--iVHGDlSefNIlV 235 (304)
T COG0478 169 EGVKVPKPIAWN------RHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRG--IVHGDLSEFNILV 235 (304)
T ss_pred cCCCCCCccccc------cceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcC--ccccCCchheEEE
Confidence 4 566665542 235699999887776532 122333334444555555555778 9999999999999
Q ss_pred eCCCCcEEEeccccceeccccc
Q 027788 164 NGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 164 ~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
+.+ |.+.++||=-+.....+.
T Consensus 236 ~~d-g~~~vIDwPQ~v~~~hp~ 256 (304)
T COG0478 236 TED-GDIVVIDWPQAVPISHPD 256 (304)
T ss_pred ecC-CCEEEEeCcccccCCCCC
Confidence 966 589999997776655544
No 452
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.48 E-value=7.8e-06 Score=62.53 Aligned_cols=145 Identities=20% Similarity=0.228 Sum_probs=80.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC--ceEEEEEEecC-CCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN--IISLHYVWRDE-DRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~~~~~-~~~~~~lv~ 107 (219)
+.++.|..+.||+..... ..+++|... .......+..|..+++.+.... +.+++...... .....+++|
T Consensus 3 ~~l~~G~~n~~~~v~~~~--~~~vlK~~~------~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD--GRYVLKFYR------PPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEESSSSEEEEEEETT--SEEEEEEES------SHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC--cEEEEEEeC------CCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 678899999999998654 488999855 2234567778999988886433 44555533222 233468899
Q ss_pred ccccCCChHH----------------HHH---hC--C--CCCHHH------HHHH---------------HHHHHH-HHH
Q 027788 108 EVCTSGNLRE----------------YRK---KH--R--HVSVKA------LKKW---------------SKQILK-GLN 142 (219)
Q Consensus 108 e~~~~g~L~~----------------~~~---~~--~--~~~~~~------~~~i---------------~~qv~~-~l~ 142 (219)
+++++..+.. .+. .. . ...... .... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9998776655 111 11 0 011000 0000 001111 222
Q ss_pred HHHh-----CCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 143 YLHT-----HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 143 ~lh~-----~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
.++. ....++|+|+.+.|++++.+.+.+.++||+.+.....
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEET
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceECCH
Confidence 2221 2234899999999999984434668999998876543
No 453
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.46 E-value=2.4e-06 Score=72.84 Aligned_cols=151 Identities=17% Similarity=0.221 Sum_probs=90.9
Q ss_pred eeeee-eeeccccceEEEEEEecCCCcEEEEEEeeecccCC--------------------------CHH----HHHH--
Q 027788 26 YGRYN-ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD--------------------------DPA----MIER-- 72 (219)
Q Consensus 26 ~~~~~-~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~--------------------------~~~----~~~~-- 72 (219)
|..++ .-|+.++-|.||+|+ .++|+.||||+........ ... ..+.
T Consensus 125 F~eF~~~PiAsASIaQVH~A~-L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEPEPIASASIAQVHRAV-LKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCCCchhhhhHhhheeEE-ecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 33444 468899999999999 5669999999976432100 000 1111
Q ss_pred ----HHHHHHHHHhhC-----CCCceEEEEEEe-cCCCceEEEEeccccCCChHHHHH-hCCCCCHHHHHHHHHHHHHHH
Q 027788 73 ----LFSEVRLLKTLA-----NKNIISLHYVWR-DEDRNTLNFITEVCTSGNLREYRK-KHRHVSVKALKKWSKQILKGL 141 (219)
Q Consensus 73 ----~~~E~~~l~~l~-----~~~i~~~~~~~~-~~~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qv~~~l 141 (219)
+.+|.....++. .+++. +=.++- -... -.++|||++|..+.+... .....+...+.....++. +
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~--~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~ 278 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVY-VPKVYWEYTTR--RVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--L 278 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeE-eceeehhccCC--cEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--H
Confidence 233333333332 12222 212221 1112 357999999988887632 124566555444433332 2
Q ss_pred HHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 142 NYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 142 ~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
..+-..+ +.|.|.+|-|++++.+ +.+.+.|||....+.+..
T Consensus 279 ~q~~~dg--ffHaDpHpGNi~v~~~-g~i~~lDfGi~g~l~~~~ 319 (517)
T COG0661 279 RQLLRDG--FFHADPHPGNILVRSD-GRIVLLDFGIVGRLDPKF 319 (517)
T ss_pred HHHHhcC--ccccCCCccceEEecC-CcEEEEcCcceecCCHHH
Confidence 3333457 9999999999999977 689999999998877654
No 454
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.45 E-value=4.9e-06 Score=63.97 Aligned_cols=137 Identities=17% Similarity=0.155 Sum_probs=77.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCc--eEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNI--ISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--~~~~~~~~~~~~~~~~lv~e 108 (219)
..||+|..+.||+. .+..+++|...... ......+|..+++.+..-.+ .+.+.+. +......++||
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~------~~~~i~~E~~~l~~l~~~glpvP~~~~~~--~~~~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF------DKETIKREFDASRKVFSLGIPTPHPFDLV--EDGGRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC------CHHHHHHHHHHHHHHHHcCCCCCceEEEE--ecCCeeeeeee
Confidence 47899999999974 24467788765321 12346789999988864333 4555555 33334567999
Q ss_pred cccCCC-hH--------------HHH----H-hCC----CCCHHH-HHHHHHH----------HHHH-HHHHH--hCCCC
Q 027788 109 VCTSGN-LR--------------EYR----K-KHR----HVSVKA-LKKWSKQ----------ILKG-LNYLH--THEPC 150 (219)
Q Consensus 109 ~~~~g~-L~--------------~~~----~-~~~----~~~~~~-~~~i~~q----------v~~~-l~~lh--~~~~~ 150 (219)
+++|.. +. ..+ . -+. ...... ...+..+ +... ..+|. ...+.
T Consensus 75 ~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 154 (226)
T TIGR02172 75 LIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST 154 (226)
T ss_pred ecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence 998753 11 100 0 010 111111 0011000 0111 11121 22234
Q ss_pred eeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 151 VIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 151 i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
++|+|+.|.|++++.+ + +.++||+.+..-
T Consensus 155 ~~HgD~~~~Nii~~~~-~-~~iIDwe~a~~G 183 (226)
T TIGR02172 155 CLHGDFQIGNLITSGK-G-TYWIDLGDFGYG 183 (226)
T ss_pred eEecCCCCCcEEEcCC-C-cEEEechhcCcC
Confidence 7899999999999854 4 899999988643
No 455
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.43 E-value=1.5e-05 Score=61.14 Aligned_cols=151 Identities=17% Similarity=0.128 Sum_probs=97.7
Q ss_pred CCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCC------------------CHHHHH-H-HHHHHHHHHh
Q 027788 23 TGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD------------------DPAMIE-R-LFSEVRLLKT 82 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~------------------~~~~~~-~-~~~E~~~l~~ 82 (219)
.+....+.-.|.+|--+.||.|.. .++..+|+|+++.....- ...+.. . ..+|...|.+
T Consensus 46 rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R 124 (268)
T COG1718 46 RGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKR 124 (268)
T ss_pred CCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 344445556888999999999974 678899999988654221 111111 1 2467778877
Q ss_pred hCC--CCceEEEEEEecCCCceEEEEeccccCC-ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCeeeeCCCC
Q 027788 83 LAN--KNIISLHYVWRDEDRNTLNFITEVCTSG-NLREYRKKHRHVSVKALKKWSKQILKGLNYLHT-HEPCVIHRDLNC 158 (219)
Q Consensus 83 l~~--~~i~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~-~~~~i~h~dl~~ 158 (219)
+.. -.+.+.+.+. .+ .++||+++.. .-.-.++.- .........+..+++..+.-|-. .+ ++|+||+.
T Consensus 125 ~~eAGVrvP~Pi~~~--~n----VLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~--LVHgDLSE 195 (268)
T COG1718 125 AYEAGVRVPEPIAFR--NN----VLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAG--LVHGDLSE 195 (268)
T ss_pred HHHcCCCCCCceeec--CC----eEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcC--cccccchh
Confidence 753 3444555554 22 5699998532 111122211 12222455666677777766665 78 99999999
Q ss_pred CceEEeCCCCcEEEeccccceeccccc
Q 027788 159 SNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 159 ~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
-|||+. + +.+.++|++-|.....+.
T Consensus 196 yNiL~~-~-~~p~iID~~QaV~~~hp~ 220 (268)
T COG1718 196 YNILVH-D-GEPYIIDVSQAVTIDHPN 220 (268)
T ss_pred hheEEE-C-CeEEEEECccccccCCCc
Confidence 999998 4 479999999998777655
No 456
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.36 E-value=5.8e-06 Score=70.46 Aligned_cols=145 Identities=14% Similarity=0.157 Sum_probs=89.1
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCC---C------------------------HHHHHH------HHHHH
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD---D------------------------PAMIER------LFSEV 77 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~---~------------------------~~~~~~------~~~E~ 77 (219)
+-|+.-+.|.|++|+ .++|+.||||+-+...... + +...+. |.+|.
T Consensus 167 ~piaaASlaQVhrA~-L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRAR-LKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEE-ecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 469999999999998 5569999999866432110 0 001111 22333
Q ss_pred HHHHhh----CCCC------ceEEEEEEecCCCceEEEEeccccCCChHHH--HHhCCCCCHHHHHHHHHHHHHHHHHHH
Q 027788 78 RLLKTL----ANKN------IISLHYVWRDEDRNTLNFITEVCTSGNLREY--RKKHRHVSVKALKKWSKQILKGLNYLH 145 (219)
Q Consensus 78 ~~l~~l----~~~~------i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--~~~~~~~~~~~~~~i~~qv~~~l~~lh 145 (219)
+...++ .|-+ |.+++--+.. .-.|+|||++|..+.+. +.+ ..++...+..-..+.. ...+-
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~--~~qIf 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAY--LEQIF 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHH--HHHHH
Confidence 333222 2323 3333322221 24689999998877654 333 3566666555554443 33344
Q ss_pred hCCCCeeeeCCCCCceEEeC---CCCcEEEeccccceeccccc
Q 027788 146 THEPCVIHRDLNCSNVFVNG---NTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 146 ~~~~~i~h~dl~~~nili~~---~~~~~~l~dfg~a~~~~~~~ 185 (219)
..| ++|+|-+|-||++.+ ..+.+.+.|||+...+....
T Consensus 319 ~~G--ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~ 359 (538)
T KOG1235|consen 319 KTG--FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKT 359 (538)
T ss_pred hcC--CccCCCCCCcEEEecCCCCCccEEEEcccccccccHHH
Confidence 557 999999999999984 24578999999998876654
No 457
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.33 E-value=8.7e-06 Score=61.63 Aligned_cols=138 Identities=12% Similarity=0.107 Sum_probs=80.7
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHH------HHHHHHHHhhCCCCceE---EEEEE---
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERL------FSEVRLLKTLANKNIIS---LHYVW--- 95 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~------~~E~~~l~~l~~~~i~~---~~~~~--- 95 (219)
++.+.+-...-..|.+-. -++..+.+|........ .......| .+++....+++...+.. ++.+.
T Consensus 34 ~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r-~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk 110 (229)
T PF06176_consen 34 KIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRR-PERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKK 110 (229)
T ss_pred eEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhh-HHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeee
Confidence 555555555555555543 45678888876644321 12222211 23444444443322222 11111
Q ss_pred ecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecc
Q 027788 96 RDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDL 175 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~df 175 (219)
..+-....+++|||++|..|.+... +.+ .+...+...+.-+|..| ++|+|.+|.|++++.+ .++++||
T Consensus 111 ~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G--~~HGD~hpgNFlv~~~--~i~iID~ 178 (229)
T PF06176_consen 111 IFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHG--FYHGDPHPGNFLVSNN--GIRIIDT 178 (229)
T ss_pred eccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcC--CccCCCCcCcEEEECC--cEEEEEC
Confidence 1111233467999999988866432 222 23455667789999999 9999999999999844 5999999
Q ss_pred cccee
Q 027788 176 GVAAI 180 (219)
Q Consensus 176 g~a~~ 180 (219)
+..+.
T Consensus 179 ~~k~~ 183 (229)
T PF06176_consen 179 QGKRM 183 (229)
T ss_pred ccccc
Confidence 76643
No 458
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.22 E-value=1.7e-05 Score=57.87 Aligned_cols=136 Identities=21% Similarity=0.196 Sum_probs=88.6
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEE
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 105 (219)
-.+..+.|++|.+|.||++... +..+|+|+-. .++....+..|++++..++..++..=...+ +++ ++
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr------~ds~r~~l~kEakiLeil~g~~~~p~vy~y-g~~----~i 89 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEWR--GGEVALKVRR------RDSPRRNLEKEAKILEILAGEGVTPEVYFY-GED----FI 89 (201)
T ss_pred hhhhhhhhhcccccEEEEeecc--CceEEEEEec------CCcchhhHHHHHHHHHHhhhcCCCceEEEe-chh----hh
Confidence 3356678999999999999753 5688988744 334456788999999999876665432222 232 44
Q ss_pred EeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCC-CceEEeCCCCcEEEeccccceecccc
Q 027788 106 ITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNC-SNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 106 v~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~-~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
.|||+.|-.|.+..... +...+.. ++....-|-..+ |-|+.|+. ...++..+ +.+.|+||.-|.....+
T Consensus 90 ~me~i~G~~L~~~~~~~---~rk~l~~----vlE~a~~LD~~G--I~H~El~~~~k~vlv~~-~~~~iIDFd~At~k~~p 159 (201)
T COG2112 90 RMEYIDGRPLGKLEIGG---DRKHLLR----VLEKAYKLDRLG--IEHGELSRPWKNVLVND-RDVYIIDFDSATFKKKP 159 (201)
T ss_pred hhhhhcCcchhhhhhcc---cHHHHHH----HHHHHHHHHHhc--cchhhhcCCceeEEecC-CcEEEEEccchhhccCC
Confidence 69999887887754321 3334333 333433345567 88888864 33333334 37999999988754443
No 459
>PLN02876 acyl-CoA dehydrogenase
Probab=98.07 E-value=0.00016 Score=65.88 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=51.7
Q ss_pred eeeccccceEEEEEEecCCC--cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC-CCCc--eEEEEEEecCC-CceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEG--IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA-NKNI--ISLHYVWRDED-RNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i--~~~~~~~~~~~-~~~~~ 104 (219)
+.++.|.++.+|+......+ ..+++|....... ......+.+|..+++.+. |+++ .+++..+.+.. ....|
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~---~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL---LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc---CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 67899999999987654322 3677776442221 112245778999999986 5655 66666664321 12356
Q ss_pred EEeccccCCC
Q 027788 105 FITEVCTSGN 114 (219)
Q Consensus 105 lv~e~~~~g~ 114 (219)
++||+++|..
T Consensus 121 lVME~v~G~~ 130 (822)
T PLN02876 121 YIMEYLEGRI 130 (822)
T ss_pred EEEEecCCcc
Confidence 8999998643
No 460
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.01 E-value=0.00022 Score=58.08 Aligned_cols=154 Identities=21% Similarity=0.246 Sum_probs=101.2
Q ss_pred CCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC--------------------CCH-HHHHHH-HHHHHH
Q 027788 22 PTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--------------------DDP-AMIERL-FSEVRL 79 (219)
Q Consensus 22 ~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--------------------~~~-~~~~~~-~~E~~~ 79 (219)
..|-...++-+|..|--+.||.|+ ..+|..+|||+++-.-.. ..+ .+++-+ -.|+..
T Consensus 141 ~RG~i~~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RN 219 (520)
T KOG2270|consen 141 NRGVIVEINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRN 219 (520)
T ss_pred hcCeeeecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHH
Confidence 456677888899999999999998 568889999998753211 112 233333 257888
Q ss_pred HHhhCCCCceEEEEEEecCCCceEEEEeccccCCChH-HHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCeeeeCCC
Q 027788 80 LKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLR-EYRKKHRHVSVKALKKWSKQILKGLNYLH-THEPCVIHRDLN 157 (219)
Q Consensus 80 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~-~~~~~~~~~~~~~~~~i~~qv~~~l~~lh-~~~~~i~h~dl~ 157 (219)
|+++....|....-..... -.|||+++...... -.+. .-.++...+..+..|++.-+.-|- .+. ++|.||+
T Consensus 220 LkRl~~aGIP~PePIlLk~----hVLVM~FlGrdgw~aPkLK-d~~ls~~ka~~~Y~~~v~~MR~lY~~c~--LVHADLS 292 (520)
T KOG2270|consen 220 LKRLNNAGIPCPEPILLKN----HVLVMEFLGRDGWAAPKLK-DASLSTSKARELYQQCVRIMRRLYQKCR--LVHADLS 292 (520)
T ss_pred HHHHHhcCCCCCCceeeec----ceEeeeeccCCCCcCcccc-cccCChHHHHHHHHHHHHHHHHHHHHhc--eeccchh
Confidence 8888765543221111111 25699998532221 1121 124566666666666666666554 556 9999999
Q ss_pred CCceEEeCCCCcEEEeccccceeccccc
Q 027788 158 CSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 158 ~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
--|+|.. + |.++++|.+-+.-..++.
T Consensus 293 EfN~Lyh-d-G~lyiIDVSQSVE~DHP~ 318 (520)
T KOG2270|consen 293 EFNLLYH-D-GKLYIIDVSQSVEHDHPH 318 (520)
T ss_pred hhhheEE-C-CEEEEEEccccccCCChh
Confidence 9999986 4 579999999887766654
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.86 E-value=0.00029 Score=54.66 Aligned_cols=74 Identities=15% Similarity=0.047 Sum_probs=46.0
Q ss_pred eeccccc-eEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC-CCceEEEEEEecCCCceEEEEecc
Q 027788 32 LLGSGAV-KKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN-KNIISLHYVWRDEDRNTLNFITEV 109 (219)
Q Consensus 32 ~ig~g~~-g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~e~ 109 (219)
.|..|.+ ..||+.... +..+.+|...... ...+.+|+.+++.+.. .-+.+++...... +.-+++|++
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~~lv~e~ 73 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-------TYELEREAERLRWLAGKLPVPEVIDYGSDD--GRAWLLTSA 73 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-------ccchHHHHHHHHHHHhcCCCCeEEEEEecC--CccEEEEEe
Confidence 3444555 889988643 4678888754221 2345678888888743 3344666655433 335679999
Q ss_pred ccCCChH
Q 027788 110 CTSGNLR 116 (219)
Q Consensus 110 ~~~g~L~ 116 (219)
++|.++.
T Consensus 74 i~G~~l~ 80 (244)
T cd05150 74 VPGVPAA 80 (244)
T ss_pred eCCccHh
Confidence 9876665
No 462
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.86 E-value=0.0016 Score=54.21 Aligned_cols=79 Identities=22% Similarity=0.184 Sum_probs=51.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC-CC--HHHHHHHHHHHHHHHhhC---CCCceEEEEEEecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-DD--PAMIERLFSEVRLLKTLA---NKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~--~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~~~ 104 (219)
+.||.|.+..||+......++.+.||.-...... .+ +-..++...|.+.|+.+. ...+.+++.+- ++. -+
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~--~~ 107 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EEL--AV 107 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCC--CE
Confidence 6799999999999987533358999985421110 01 224567788888888763 24566766553 322 45
Q ss_pred EEeccccCC
Q 027788 105 FITEVCTSG 113 (219)
Q Consensus 105 lv~e~~~~g 113 (219)
++||++++.
T Consensus 108 lVME~L~~~ 116 (401)
T PRK09550 108 TVMEDLSDH 116 (401)
T ss_pred EEEecCCCc
Confidence 799998753
No 463
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.83 E-value=0.0003 Score=54.30 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=25.0
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceecc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVG 182 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~ 182 (219)
.++|+|+++.|++++.+ +...|+||+.+..-.
T Consensus 165 ~l~HGD~~~~Nvlv~~~-~i~giIDw~~a~~gD 196 (235)
T cd05155 165 VWFHGDLAPGNLLVQDG-RLSAVIDFGCLGVGD 196 (235)
T ss_pred eEEeCCCCCCcEEEECC-CEEEEEeCcccCcCC
Confidence 38999999999999843 234699999886543
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.81 E-value=0.00018 Score=53.62 Aligned_cols=102 Identities=21% Similarity=0.162 Sum_probs=77.3
Q ss_pred HHHHHHHhhCC-CCceEEEEEEecCCCceEEEEeccccCCChHH---HHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCC-
Q 027788 75 SEVRLLKTLAN-KNIISLHYVWRDEDRNTLNFITEVCTSGNLRE---YRKKHRHVSVKALKKWSKQILKGLNYLHTHEP- 149 (219)
Q Consensus 75 ~E~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~---~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~- 149 (219)
.|.-+++.+++ +++.+++++| .+ +++.|+.+.+++.. .+......++..+.+++.+++..+.+++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C--G~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC--GR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC--CC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 58888888887 6899999999 22 45889997665532 11222346899999999999999999987422
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
.+.-.|++++|+.++.+ +++|+.|.........
T Consensus 82 ~~~lcDv~~~nfgv~~~-~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDD-GRLKLIDLDDVFVEDK 114 (188)
T ss_pred cEEEeecchHHeEEeCC-CcEEEEechhcchhHH
Confidence 17789999999999855 6899999987755443
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.80 E-value=0.0029 Score=47.48 Aligned_cols=133 Identities=17% Similarity=0.286 Sum_probs=84.3
Q ss_pred CCceeeeeeeeccccc-eEEEEEEecCCCcEEEEEEeeecccCCC-----------------HHHHHHHHHHHHHHHhhC
Q 027788 23 TGRYGRYNELLGSGAV-KKVYRAFDQEEGIEVAWNQVKLRTFCDD-----------------PAMIERLFSEVRLLKTLA 84 (219)
Q Consensus 23 ~~~~~~~~~~ig~g~~-g~V~~a~~~~~~~~vavK~~~~~~~~~~-----------------~~~~~~~~~E~~~l~~l~ 84 (219)
.+.-.++.+.||.|.- |.||+++- .|..+|+|+...-..... ......|..|...+.+|+
T Consensus 35 h~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk 112 (207)
T PF13095_consen 35 HGDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK 112 (207)
T ss_pred CCCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence 3344567789999999 99999964 577999999332111110 023456788888887775
Q ss_pred C---CCc--eEEEEEEecCC-C---------------ceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Q 027788 85 N---KNI--ISLHYVWRDED-R---------------NTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNY 143 (219)
Q Consensus 85 ~---~~i--~~~~~~~~~~~-~---------------~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~ 143 (219)
. .++ ++++++..-.. + ...-+|-|+.+... .+.... +.++..-+..
T Consensus 113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~----~~~~~~dl~~ 179 (207)
T PF13095_consen 113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRD----IPQMLRDLKI 179 (207)
T ss_pred hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhH----HHHHHHHHHH
Confidence 3 344 77777764321 1 11123444443211 122233 3456666888
Q ss_pred HHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccc
Q 027788 144 LHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVA 178 (219)
Q Consensus 144 lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a 178 (219)
+|..+ |+-+|+++.|.. + | +|.|||.+
T Consensus 180 ~~k~g--I~~~Dv~~~ny~---~-G--~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKLG--IVPRDVKPRNYR---G-G--KLVDFSSS 206 (207)
T ss_pred HHHCC--eeeccCcccccc---C-C--EEEecccC
Confidence 99999 999999999965 3 3 78999865
No 466
>PRK10593 hypothetical protein; Provisional
Probab=97.72 E-value=0.0017 Score=52.03 Aligned_cols=77 Identities=13% Similarity=0.062 Sum_probs=50.5
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCC---CCceEEEEEEecC-CCceEEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLAN---KNIISLHYVWRDE-DRNTLNFI 106 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~i~~~~~~~~~~-~~~~~~lv 106 (219)
+.||.|..+.||..... ++ .+.+|..+... . ...+.+|...++.|.. ..+.++++++..+ ..+.-+++
T Consensus 20 ~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~---~---~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 20 ECISEQPYAALWALYDS-QG-NPMPLMARSFS---T---PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred eecCCccceeEEEEEcC-CC-CEEEEEecccc---c---chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 57999999999997532 23 46667643211 1 1457789999988854 3566777766432 12335779
Q ss_pred eccccCCCh
Q 027788 107 TEVCTSGNL 115 (219)
Q Consensus 107 ~e~~~~g~L 115 (219)
||++++.++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999987643
No 467
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.71 E-value=1e-05 Score=69.43 Aligned_cols=170 Identities=15% Similarity=0.162 Sum_probs=108.5
Q ss_pred CceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC-ceEEEEEEecCCCce
Q 027788 24 GRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN-IISLHYVWRDEDRNT 102 (219)
Q Consensus 24 ~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~ 102 (219)
.+++..-.-+++++++++++.+...+...+ .+++... ....-++++|.+++||| .+..++-+ +...+
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---------l~~rl~~eLLdK~n~P~~~v~~~~d~--~~E~~ 308 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---------LSRRLAIELLDKVNNPNPVVRYLEDY--DGEDY 308 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---------hhhHHHHHHHHHccCCCCcccccccC--Ccccc
Confidence 334444467889999999998766554433 5554422 23446899999999999 44444444 55567
Q ss_pred EEEEeccccCC-ChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 103 LNFITEVCTSG-NLREYRK-KHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 103 ~~lv~e~~~~g-~L~~~~~-~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++.++++.++ +-...+. ....+.......+.+.-..+++++|+.. -+|+| |++... +..+..+|+....
T Consensus 309 ~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~--~~~~d----~~l~s~--~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 309 LWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY--KVHRD----NILGSE--EEVKLLDFAVPPQ 380 (829)
T ss_pred cchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc--ccCcc----cccccc--cccccccccCCcc
Confidence 88899999765 2221111 1112444455556666778889999765 47877 777653 3689999999888
Q ss_pred ccccceeeeecccCccc----cCCCccccccceeeec
Q 027788 181 VGRAIRRIRCWGRRSSW----RRSCTMRITRSLWTYT 213 (219)
Q Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~diws~g 213 (219)
+.......+..+.|+.. .....+...-|.||++
T Consensus 381 L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~ 417 (829)
T KOG0576|consen 381 LTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLA 417 (829)
T ss_pred cCcccccccCCCCCCCCCchhhcccccccCCCccCCC
Confidence 87765444444443322 2334566677889888
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.60 E-value=0.0048 Score=46.39 Aligned_cols=138 Identities=20% Similarity=0.275 Sum_probs=87.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCC------------CHHHHHHHHHHHHHHHhhC------CCCceEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCD------------DPAMIERLFSEVRLLKTLA------NKNIISLH 92 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~------------~~~~~~~~~~E~~~l~~l~------~~~i~~~~ 92 (219)
..||+|+.=.+|.- + .....+||+........ .....+...+|+..+..+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H--P-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--P-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--C-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 56889999888863 3 34567899887554000 0123466778888887777 67889999
Q ss_pred EEEecCCCceEEEEecccc------CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCC
Q 027788 93 YVWRDEDRNTLNFITEVCT------SGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGN 166 (219)
Q Consensus 93 ~~~~~~~~~~~~lv~e~~~------~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~ 166 (219)
++..+..+.. +++|... ..+|.+++... .++. .....+.++ ..+|-... |+.+|++|.||++...
T Consensus 84 G~veT~~G~G--lv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~~~L~~f---~~~l~~~~--Iv~~dl~~~NIv~~~~ 154 (199)
T PF10707_consen 84 GFVETNLGLG--LVVELIRDADGNISPTLEDYLKEG-GLTE-ELRQALDEF---KRYLLDHH--IVIRDLNPHNIVVQRR 154 (199)
T ss_pred EEEecCCceE--EEEEEEECCCCCcCccHHHHHHcC-CccH-HHHHHHHHH---HHHHHHcC--CeecCCCcccEEEEec
Confidence 9986655433 3666542 23677776433 4555 444444443 55666777 9999999999998633
Q ss_pred C-C--cEEEec-ccccee
Q 027788 167 T-G--QVKIGD-LGVAAI 180 (219)
Q Consensus 167 ~-~--~~~l~d-fg~a~~ 180 (219)
. + .+.++| ||....
T Consensus 155 ~~~~~~lvlIDG~G~~~~ 172 (199)
T PF10707_consen 155 DSGEFRLVLIDGLGEKEL 172 (199)
T ss_pred CCCceEEEEEeCCCCccc
Confidence 2 1 355554 455444
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.58 E-value=0.0032 Score=48.46 Aligned_cols=74 Identities=18% Similarity=0.161 Sum_probs=44.8
Q ss_pred eeeccccceEEEEEEecC-CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC-ceEEEEEEecCCCceEEEEec
Q 027788 31 ELLGSGAVKKVYRAFDQE-EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN-IISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~~~~~~~~~~~~~lv~e 108 (219)
+.|..|-...+|+..... .+..+.+|+...... .. -...+|..+++.+...+ ..+++..+ ++ .++||
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~-~d~~~E~~~~~~l~~~gl~P~v~~~~--~~----~~l~e 72 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LI-IDRERELRIHKLLSKHGLAPKLYATF--QN----GLIYE 72 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ce-ecHHHHHHHHHHHHhCCCCCeEEEEe--CC----cEEEE
Confidence 567788889999986443 356888997653211 11 12236888888885433 34444433 22 25999
Q ss_pred cccCCCh
Q 027788 109 VCTSGNL 115 (219)
Q Consensus 109 ~~~~g~L 115 (219)
|++|.++
T Consensus 73 ~i~G~~l 79 (235)
T cd05157 73 FIPGRTL 79 (235)
T ss_pred eeCCCcC
Confidence 9887554
No 470
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.47 E-value=0.003 Score=51.70 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=49.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC---CCHHHHHHHHHHHHHHHhhCC--C-CceEEEEEEecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC---DDPAMIERLFSEVRLLKTLAN--K-NIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~~--~-~i~~~~~~~~~~~~~~~~ 104 (219)
+.||.|...-||++.....++.++||.-...... +-+-...+...|.+.|+.... | .+.+++.+- ++ .-.
T Consensus 1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D--~e--~~~ 76 (370)
T TIGR01767 1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFD--TE--MAV 76 (370)
T ss_pred CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEc--cc--cce
Confidence 3689999999999997543368999985432211 113345667788888876542 3 455554432 32 234
Q ss_pred EEeccccC
Q 027788 105 FITEVCTS 112 (219)
Q Consensus 105 lv~e~~~~ 112 (219)
++||+++.
T Consensus 77 ~vMEdL~~ 84 (370)
T TIGR01767 77 TVMEDLSH 84 (370)
T ss_pred ehHhhCcc
Confidence 69999854
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.47 E-value=0.0011 Score=51.79 Aligned_cols=139 Identities=20% Similarity=0.234 Sum_probs=74.6
Q ss_pred eccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCc-eEEEEEEecCCCceEEEEecccc
Q 027788 33 LGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNI-ISLHYVWRDEDRNTLNFITEVCT 111 (219)
Q Consensus 33 ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~e~~~ 111 (219)
+..|..+.+|+.. .++..+++|...... ....-...+|..+++.+....+ .+++... ++ ++++|+++
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~----~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~~----~~v~e~i~ 71 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVC----KALGVDRQREYQILQALSALGLAPKPILVN--EH----WLLVEWLE 71 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCccc----ccccCcHHHHHHHHHHHHhcCCCCceEEEe--CC----EEEEEecc
Confidence 4567788888876 456678888644221 1100123568888888865333 3444333 22 46899998
Q ss_pred CCChHH--------------HHHh-C--C----CCCHH-HHHHHHHHH---------HHHHHHHHhC------CCCeeee
Q 027788 112 SGNLRE--------------YRKK-H--R----HVSVK-ALKKWSKQI---------LKGLNYLHTH------EPCVIHR 154 (219)
Q Consensus 112 ~g~L~~--------------~~~~-~--~----~~~~~-~~~~i~~qv---------~~~l~~lh~~------~~~i~h~ 154 (219)
|..+.. .+.. + . +++.. .+.....++ ......+-.. .+.++|+
T Consensus 72 G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~ 151 (256)
T TIGR02721 72 GEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHM 151 (256)
T ss_pred CcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecC
Confidence 754421 1111 1 0 11111 111111111 1111111111 1248999
Q ss_pred CCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 155 DLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 155 dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
|+.+.|++++.+ + +.++||+.+..-.+..
T Consensus 152 Dl~~~Nil~~~~-~-~~lIDwE~a~~gdp~~ 180 (256)
T TIGR02721 152 DVHAYNLVVTPQ-G-LKLIDWEYASDGDIAL 180 (256)
T ss_pred CCCcCcEEEeCC-C-CEEEeccccCcCCHHH
Confidence 999999999855 3 7899999887654433
No 472
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.11 E-value=0.015 Score=46.15 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=26.4
Q ss_pred CeeeeCCCCCceEEeCCCCcE-EEeccccceeccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQV-KIGDLGVAAIVGR 183 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~-~l~dfg~a~~~~~ 183 (219)
.++|+|+++.|++++.+ +.+ .|+||+.+..-.+
T Consensus 186 ~lvHGD~~~~Nilv~~~-~~~~gviDWe~a~iGDP 219 (276)
T cd05152 186 VLVHGDLHPGHILIDED-ARVTGLIDWTEAKVGDP 219 (276)
T ss_pred eeEeCCCCCCcEEEeCC-CCEEEEECcHhcccCCH
Confidence 48999999999999854 344 6999999876544
No 473
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.07 E-value=0.011 Score=49.19 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=50.6
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccC--CCHHHHHHHHHHHHHHHhhCC--C-CceEEEEEEecCCCceEEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC--DDPAMIERLFSEVRLLKTLAN--K-NIISLHYVWRDEDRNTLNF 105 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~E~~~l~~l~~--~-~i~~~~~~~~~~~~~~~~l 105 (219)
+.||.|...-||++.+...++.|+||.-...... +=+-..++...|.+.|+.+.. | .+.+++.+- ++ .-.+
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D--~e--~~~~ 110 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFD--SV--MNCC 110 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEEC--cH--HhhH
Confidence 6899999999999987444567999985422111 113445777888888876642 3 455555432 32 2346
Q ss_pred EeccccC
Q 027788 106 ITEVCTS 112 (219)
Q Consensus 106 v~e~~~~ 112 (219)
+||+++.
T Consensus 111 vMEdL~~ 117 (409)
T PRK12396 111 VMEDLSD 117 (409)
T ss_pred HHHhCcc
Confidence 9999864
No 474
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.03 E-value=0.026 Score=47.10 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=49.2
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCH---HHHHHHHHHHHHHHhhC---CCCceEEEEEEecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDP---AMIERLFSEVRLLKTLA---NKNIISLHYVWRDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~~~ 104 (219)
+.||.|....||+..+. +..++||.-......... ....+-..|...|+.+. ...+.+++.++. +. -+
T Consensus 38 ~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~--~v 111 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TM--AL 111 (418)
T ss_pred EEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CC--CE
Confidence 68899999999998753 456889975522221111 13455566777776654 246778877763 32 35
Q ss_pred EEeccccC
Q 027788 105 FITEVCTS 112 (219)
Q Consensus 105 lv~e~~~~ 112 (219)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 58999965
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.02 E-value=0.0035 Score=49.99 Aligned_cols=141 Identities=17% Similarity=0.097 Sum_probs=75.0
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC--ceEEEEEE----ecCCCceEE
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN--IISLHYVW----RDEDRNTLN 104 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~--i~~~~~~~----~~~~~~~~~ 104 (219)
+.+..|....+|+... ++..+++|..... . ...+..|+.+++.+...+ +.+++... .....+..+
T Consensus 20 ~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~----~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~ 90 (296)
T cd05153 20 EGISAGIENTNYFVTT--DSGRYVLTLFEKV----S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA 90 (296)
T ss_pred ecccCccccceEEEEe--CCCcEEEEEcCCC----C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence 5677788889998753 3446888876531 1 234556788777775332 33433211 001123356
Q ss_pred EEeccccCCChHH-----------HHHh-C---CCCCH--------HHHH------------HHHHHHHHHHHHHHh---
Q 027788 105 FITEVCTSGNLRE-----------YRKK-H---RHVSV--------KALK------------KWSKQILKGLNYLHT--- 146 (219)
Q Consensus 105 lv~e~~~~g~L~~-----------~~~~-~---~~~~~--------~~~~------------~i~~qv~~~l~~lh~--- 146 (219)
+++++++|..+.. .+.. + ..+.. .-.. .....+...+.++..
T Consensus 91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 170 (296)
T cd05153 91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP 170 (296)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence 7999998754321 0100 0 00000 0000 001112223333332
Q ss_pred --CCCCeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 147 --HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 147 --~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
....++|+|++|.|++++.+ +.+.|+||+.+..-
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~~-~~~~iIDfe~a~~g 206 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDGD-ELSGVIDFYFACTD 206 (296)
T ss_pred hcCCCcCCccCcCcccEEEeCC-ceEEEeehhhhcCc
Confidence 11238999999999999854 34579999988654
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.95 E-value=0.033 Score=44.60 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=28.9
Q ss_pred CeeeeCCCCCceEEeCC---CCcEEEeccccceeccccc
Q 027788 150 CVIHRDLNCSNVFVNGN---TGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~---~~~~~l~dfg~a~~~~~~~ 185 (219)
.++|+|+.+.||+++.+ .+.+.++||+.|....+..
T Consensus 180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~ 218 (302)
T cd05156 180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGF 218 (302)
T ss_pred eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHH
Confidence 48999999999999853 2479999999997665533
No 477
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.80 E-value=0.032 Score=45.05 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=27.6
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
+++|+|+++.|++++.+. .+-++||+++..-.+
T Consensus 199 ~lvHGD~~~gNlii~~~~-~~gVlDwe~~~lGDP 231 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGR-PTGVLDWELATLGDP 231 (321)
T ss_pred eeeeCCcccCCEEEeCCC-eeEEEeccccccCCc
Confidence 589999999999999665 488999999975444
No 478
>PLN02236 choline kinase
Probab=96.79 E-value=0.023 Score=46.62 Aligned_cols=147 Identities=18% Similarity=0.182 Sum_probs=79.9
Q ss_pred eeeeeeeeccccceEEEEEEecC----CCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCce-EEEEEEecCCC
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQE----EGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNII-SLHYVWRDEDR 100 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~~~~~~~~~ 100 (219)
...+ +.+-.|-+..+|+..... .+..+.+|+..... ...+.+ .+|..+++.+..-++. ++++.+ ++.
T Consensus 38 ~~~i-~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t----~~~idR-~~E~~~~~~l~~~gl~P~~~~~~--~~g 109 (344)
T PLN02236 38 ALQV-IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV----ELFFDR-DDEIRTFECMSRHGQGPRLLGRF--PNG 109 (344)
T ss_pred cEEE-EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC----Ceeech-HHHHHHHHHHHHcCCCCceEEEE--CCc
Confidence 3345 355568889999986322 24678888765432 122222 5688888888654443 455555 322
Q ss_pred ceEEEEeccccCCChHHH--------------HHh-C--C-C----CC-HHHHHHHHHHH-----------------HHH
Q 027788 101 NTLNFITEVCTSGNLREY--------------RKK-H--R-H----VS-VKALKKWSKQI-----------------LKG 140 (219)
Q Consensus 101 ~~~~lv~e~~~~g~L~~~--------------~~~-~--~-~----~~-~~~~~~i~~qv-----------------~~~ 140 (219)
.+++|+++.++... +.. + . + .. ...+..+..++ ...
T Consensus 110 ----~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~ 185 (344)
T PLN02236 110 ----RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDE 185 (344)
T ss_pred ----eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHH
Confidence 36777765444210 110 1 0 0 11 12222222111 111
Q ss_pred HHHHH----h--CCCCeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 141 LNYLH----T--HEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 141 l~~lh----~--~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
+..|. . ....++|+|+++.||+++.+.+.+.++||+.+......
T Consensus 186 ~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~ 235 (344)
T PLN02236 186 INLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVA 235 (344)
T ss_pred HHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchH
Confidence 11121 1 11248999999999999854457999999998866543
No 479
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=96.78 E-value=0.0014 Score=57.06 Aligned_cols=45 Identities=24% Similarity=0.496 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccceeccc
Q 027788 137 ILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGR 183 (219)
Q Consensus 137 v~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~ 183 (219)
++.|+.++|+... ++|+++.|+++.++.+ +..|+..|+++.....
T Consensus 108 v~dgl~flh~sAk-~VH~ni~p~~i~~na~-~~wkl~Gf~f~v~~~~ 152 (700)
T KOG2137|consen 108 VADGLAFLHRSAK-VVHGNIQPEAIVVNAN-GDWKLAGFSFCVNANG 152 (700)
T ss_pred ccchhhhhccCcc-eeecccchhheeeccC-cceeeccchhhhccCC
Confidence 4489999996532 9999999999999966 5899999998887766
No 480
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.77 E-value=0.014 Score=48.62 Aligned_cols=181 Identities=13% Similarity=0.101 Sum_probs=100.0
Q ss_pred CCCCceeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEE----EE-E
Q 027788 21 DPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLH----YV-W 95 (219)
Q Consensus 21 ~~~~~~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~----~~-~ 95 (219)
++-+.-.-....||+|+-+.+|..-.- ..-+.|+++..... .+ .....|+ .+--.||-+..-. .. +
T Consensus 7 ~~~ge~i~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa---~~-aqk~a~l--a~~p~~p~~~~rvaWPqa~L~ 77 (637)
T COG4248 7 DVYGEPIPPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPA---AQ-AQKVAEL--AATPDAPLLNYRVAWPQATLH 77 (637)
T ss_pred cccCcccCCCccccCCccceeeecchh---hchhheeecCCCch---HH-HHHHHHh--ccCCCCcchhhhhcccHHHhh
Confidence 333444456678999999999964322 23456777654321 11 1111111 1122344332200 00 1
Q ss_pred ecCCCceEEEEeccccCC-ChHHH------HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCC
Q 027788 96 RDEDRNTLNFITEVCTSG-NLREY------RKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTG 168 (219)
Q Consensus 96 ~~~~~~~~~lv~e~~~~g-~L~~~------~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~ 168 (219)
-...+..+=+.|+.+++. .+..+ .++.+..+++..+++.+.++.+...||..+ ..-+|++++|+|++.+ +
T Consensus 78 G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G--h~vGDVn~~~~lVsd~-~ 154 (637)
T COG4248 78 GGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG--HVVGDVNQNSFLVSDD-S 154 (637)
T ss_pred CCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC--CcccccCccceeeecC-c
Confidence 112222244577777543 12222 223345789999999999999999999999 8889999999999844 6
Q ss_pred cEEEeccccceeccccceeeeeccc----CccccC-----CCccccccceeeec
Q 027788 169 QVKIGDLGVAAIVGRAIRRIRCWGR----RSSWRR-----SCTMRITRSLWTYT 213 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~diws~g 213 (219)
.+.+.|-..-.....+.....-++. |++..+ ..+-+...|.++||
T Consensus 155 ~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLa 208 (637)
T COG4248 155 KVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLA 208 (637)
T ss_pred eEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHH
Confidence 7888765333222222221112222 223222 33345567888888
No 481
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=96.71 E-value=0.00019 Score=64.98 Aligned_cols=146 Identities=16% Similarity=0.164 Sum_probs=98.6
Q ss_pred eeeeeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEe
Q 027788 28 RYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 28 ~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
.+.+-+-++.++.++.+....++...+.|+......... ...+..+.+-.++....+|-+++....+... ...+|++
T Consensus 807 ~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~-~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~r--sP~~L~~ 883 (1205)
T KOG0606|consen 807 EITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT-NDYESIRSKSNILITPRSPAVVRSFPSFPCR--SPLPLVG 883 (1205)
T ss_pred eecccccCCCCcccccCCccccccccchhhhccchhhcc-ccccccCCccCccccCCCCceecccCCCCCC--CCcchhh
Confidence 344567789999999887766675555555432211100 0112233344444444456555544443222 3467899
Q ss_pred ccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEeccccce
Q 027788 108 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA 179 (219)
Q Consensus 108 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~a~ 179 (219)
+++.+++|...+...+..+.+-.+-....+....++||... +.|+|++|.|.+...+ +..++.+|+...
T Consensus 884 ~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~--r~h~~~~p~~~l~~~~-gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSL--RKHRDLKPDSLLIAYD-GHRPLTDFGTLS 952 (1205)
T ss_pred HHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccch--hhcccccccchhhccc-CCcccCcccccc
Confidence 99999999998887777777766677777888999999987 8999999999998755 578999997443
No 482
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.39 E-value=0.053 Score=43.59 Aligned_cols=31 Identities=32% Similarity=0.335 Sum_probs=25.5
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.++|+|+++.|++++.+ +.+.++||+.+..-
T Consensus 188 ~l~HgD~~~~Nvl~~~~-~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 188 GVIHADLFPDNVLFDGD-SVKGVIDFYFACTD 218 (307)
T ss_pred ccCCCCCCcCcEEEECC-ceEEEeecccccCc
Confidence 39999999999999865 34589999988543
No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.32 E-value=0.11 Score=42.28 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=29.2
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
.+.|+|+.+.||+++.+.+.++++||+.|....+..
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~f 218 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGY 218 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCCCccHH
Confidence 379999999999997554579999999987765544
No 484
>PRK05231 homoserine kinase; Provisional
Probab=96.28 E-value=0.25 Score=39.82 Aligned_cols=31 Identities=32% Similarity=0.276 Sum_probs=24.7
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceec
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIV 181 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~ 181 (219)
.++|+|+++.|++++.+ ....++||+.+..-
T Consensus 188 ~liHgD~~~~Nil~~~~-~~~~iIDf~~~~~~ 218 (319)
T PRK05231 188 GVIHADLFRDNVLFEGD-RLSGFIDFYFACND 218 (319)
T ss_pred ccCCCCCCCCcEEEECC-ceEEEEecccccCC
Confidence 39999999999999844 23479999988643
No 485
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.86 E-value=0.0019 Score=54.04 Aligned_cols=44 Identities=23% Similarity=0.354 Sum_probs=32.5
Q ss_pred cEEEeccccceeccccce---eeeecccCccccCCCccccccceeeec
Q 027788 169 QVKIGDLGVAAIVGRAIR---RIRCWGRRSSWRRSCTMRITRSLWTYT 213 (219)
Q Consensus 169 ~~~l~dfg~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~diws~g 213 (219)
++||+|||-|.......+ ++.-+++| +......|..++||||++
T Consensus 392 ~vKIaDlGNACW~~khFT~DIQTRQYRap-EVllGsgY~~~ADiWS~A 438 (590)
T KOG1290|consen 392 RVKIADLGNACWVHKHFTEDIQTRQYRAP-EVLLGSGYSTSADIWSTA 438 (590)
T ss_pred eEEEeeccchhhhhhhhchhhhhhhccCc-ceeecCCCCCchhHHHHH
Confidence 689999999887654443 44445554 556667788899999999
No 486
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.67 E-value=0.36 Score=38.60 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=41.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhC---CCCceEEEEEEecCCCceEEEEe
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLA---NKNIISLHYVWRDEDRNTLNFIT 107 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~---~~~i~~~~~~~~~~~~~~~~lv~ 107 (219)
+.++-|....+|+.. .++..+.+|.-. .. ....+..|.+-|+.|. ...+.+++.+....+.. ++++
T Consensus 23 ~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~--fLll 91 (288)
T PF03881_consen 23 EPVSGGDINEAYRLD--TDGGSYFVKVNS-ES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDA--FLLL 91 (288)
T ss_dssp EEE--SSSSEEEEEE--TTS-EEEEEEEE-GG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCC--EEEE
T ss_pred EecCCCChhheEEEE--CCCccEEEEecC-hh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCc--eEEE
Confidence 567789999999876 667788999755 21 1145667888888773 34566777766544433 6799
Q ss_pred ccccCC
Q 027788 108 EVCTSG 113 (219)
Q Consensus 108 e~~~~g 113 (219)
|+++.+
T Consensus 92 e~l~~~ 97 (288)
T PF03881_consen 92 EFLEMG 97 (288)
T ss_dssp E-----
T ss_pred EeecCC
Confidence 998654
No 487
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.42 E-value=0.3 Score=37.69 Aligned_cols=69 Identities=16% Similarity=0.174 Sum_probs=43.1
Q ss_pred eEEEEEEecCCC-cEEEEEEeeecccCCCHHHHHHHHHHHHHHHhhCCCC---ceEEEEEEecCCCceEEEEeccccCCC
Q 027788 39 KKVYRAFDQEEG-IEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKN---IISLHYVWRDEDRNTLNFITEVCTSGN 114 (219)
Q Consensus 39 g~V~~a~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~---i~~~~~~~~~~~~~~~~lv~e~~~~g~ 114 (219)
|.|-.|....+| .++.+|+ + ...+...|..|+.-|..+...| +.+++. .......-|+|+||++-+.
T Consensus 27 G~inea~~v~dg~~~~FvK~-n------~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~--~G~~~~~sylVle~L~~~~ 97 (286)
T COG3001 27 GDINEAWRLRDGTDPFFVKC-N------QREQLSMFTAEADGLELLARSNTITVPKVIA--VGASRDHSYLVLEYLPTGP 97 (286)
T ss_pred ccccceeEeecCCcceEEEe-c------chhhHHHHHHHHHHHHHHHhcCCccccceEE--ecCCCCeeEEEEeeccCCC
Confidence 444444444444 3566664 2 3455678889999888776554 444443 3456677889999998654
Q ss_pred hH
Q 027788 115 LR 116 (219)
Q Consensus 115 L~ 116 (219)
+.
T Consensus 98 ~d 99 (286)
T COG3001 98 LD 99 (286)
T ss_pred CC
Confidence 43
No 488
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.35 E-value=0.095 Score=43.13 Aligned_cols=78 Identities=14% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeCCCCcEEEecccc
Q 027788 98 EDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGV 177 (219)
Q Consensus 98 ~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~~~~~~~l~dfg~ 177 (219)
.++.+.|+++++- |+++.. +. .....++..++.+.+..+.-+.. .-+.-|||+...||+++ + |++.|+||-+
T Consensus 296 de~~y~yl~~kdh-gt~is~-ik---~~~~~e~lsff~s~~sil~~lek-kf~fehrnlt~~niLId-~-GnvtLIDfkl 367 (488)
T COG5072 296 DETLYLYLHFKDH-GTPISI-IK---ADRSEEELSFFWSCISILDILEK-KFPFEHRNLTLDNILID-E-GNVTLIDFKL 367 (488)
T ss_pred CCceEEEEEEecC-Cceeee-ee---cccHHHHHHHHHHHHHHHhhhhh-cCCcccccccccceeee-c-CceEEEEeee
Confidence 3456778888876 455542 11 23456666666665554444443 33478999999999998 5 6899999999
Q ss_pred ceeccc
Q 027788 178 AAIVGR 183 (219)
Q Consensus 178 a~~~~~ 183 (219)
++...+
T Consensus 368 sRl~~~ 373 (488)
T COG5072 368 SRLSYS 373 (488)
T ss_pred eecccC
Confidence 985443
No 489
>PTZ00384 choline kinase; Provisional
Probab=95.20 E-value=0.26 Score=41.07 Aligned_cols=33 Identities=18% Similarity=0.137 Sum_probs=26.5
Q ss_pred eeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 151 VIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 151 i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
..|.|+.+.||+.+.+ .+.++||..|.......
T Consensus 229 fCHNDL~~gNIL~~~~--~l~lID~EYA~~n~~~f 261 (383)
T PTZ00384 229 FCHNDLFFTNILDFNQ--GIYFIDFDFAGFNYVGW 261 (383)
T ss_pred eeeccCCcccEEecCC--CEEEEEeccccCCchHh
Confidence 7999999999997633 69999999887655543
No 490
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=95.02 E-value=0.029 Score=45.38 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=87.4
Q ss_pred eeeeeeeeccccceEEEEEEecCCCcEEEEEEeeecccC-------------CCHH---HHHH--HHHHHHHHHhhCCC-
Q 027788 26 YGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFC-------------DDPA---MIER--LFSEVRLLKTLANK- 86 (219)
Q Consensus 26 ~~~~~~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~-------------~~~~---~~~~--~~~E~~~l~~l~~~- 86 (219)
.+.++..||-|--+-||.+.+ ..|.+.++|+-..-... .... .+.+ ..+|...++.|.-.
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 446778899999999999875 46778888863321100 0000 1112 23567777766431
Q ss_pred -CceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCCeeeeCCCCCceEEeC
Q 027788 87 -NIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNG 165 (219)
Q Consensus 87 -~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~i~h~dl~~~nili~~ 165 (219)
-+.+.++.. .-++|||.+.+-.|..... -.+.. .+...+..-+.-|..++ ++|+|.+-=||++..
T Consensus 172 fpVPkpiD~~------RH~Vvmelv~g~Pl~~v~~---v~d~~---~ly~~lm~~Iv~la~~G--lIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 172 FPVPKPIDHN------RHCVVMELVDGYPLRQVRH---VEDPP---TLYDDLMGLIVRLANHG--LIHGDFNEFNIMVKD 237 (465)
T ss_pred CCCCCccccc------ceeeHHHhhcccceeeeee---cCChH---HHHHHHHHHHHHHHHcC--ceecccchheeEEec
Confidence 122333332 2467999998877754321 11222 23334444466677889 999999999999985
Q ss_pred CCCcEEEeccccceeccccc
Q 027788 166 NTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 166 ~~~~~~l~dfg~a~~~~~~~ 185 (219)
+ +.++++||=-+.....+.
T Consensus 238 d-~~i~vIDFPQmvS~sh~n 256 (465)
T KOG2268|consen 238 D-DKIVVIDFPQMVSTSHPN 256 (465)
T ss_pred C-CCEEEeechHhhccCCCc
Confidence 5 579999996555444443
No 491
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=94.69 E-value=0.058 Score=50.25 Aligned_cols=141 Identities=20% Similarity=0.277 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhhCCCCceEEEEEEecCCCce--EEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 027788 71 ERLFSEVRLLKTLANKNIISLHYVWRDEDRNT--LNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHE 148 (219)
Q Consensus 71 ~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~--~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~ 148 (219)
...-.|.+.+.+..|+|+..++.+-....... +.+..++|..-++.+.++.-...+..+.+.+..+...|+.++|...
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 34445777888999999999876654332222 2234577877788888887778899999999999999999999886
Q ss_pred CCeeeeCCCCC---ceEEeCCCCcEEEe--ccccceeccccceeeeecccCcc----ccCCCccccc--cceeeecc
Q 027788 149 PCVIHRDLNCS---NVFVNGNTGQVKIG--DLGVAAIVGRAIRRIRCWGRRSS----WRRSCTMRIT--RSLWTYTR 214 (219)
Q Consensus 149 ~~i~h~dl~~~---nili~~~~~~~~l~--dfg~a~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~diws~gi 214 (219)
..|.-|... +...+.+ +.+.+. ||+..+..............+.. -........+ .|+|.+|.
T Consensus 307 --l~~v~L~~s~~~~~~~~~e-~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 307 --LEHVVLSASSSKESTVDGE-GVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred --cceeEEecccccccccCcc-ceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHH
Confidence 655555444 2222333 234444 88887776665543222222211 1223333333 58998883
No 492
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=94.57 E-value=0.023 Score=39.01 Aligned_cols=45 Identities=33% Similarity=0.504 Sum_probs=33.8
Q ss_pred eeeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHHHHHHhh
Q 027788 31 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTL 83 (219)
Q Consensus 31 ~~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l 83 (219)
.-|+.|+.|.||+|+ .++|+.||||+.+ +...+.+..++.+++.+
T Consensus 17 ~PlasASiaQVh~a~-l~~g~~VaVKV~r-------P~i~~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 17 EPLASASIAQVHRAR-LKDGEEVAVKVQR-------PGIEEQIEADLRILRRL 61 (119)
T ss_pred chhhheehhhheeee-ecccchhhhhhcc-------hHHHHHHHHHHHHHHHH
Confidence 359999999999998 4569999999866 33345566677776554
No 493
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.23 E-value=0.3 Score=40.92 Aligned_cols=61 Identities=20% Similarity=0.165 Sum_probs=37.7
Q ss_pred EEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCeeeeCCCCCceEEeCCC
Q 027788 104 NFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNY-LHTHEPCVIHRDLNCSNVFVNGNT 167 (219)
Q Consensus 104 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~-lh~~~~~i~h~dl~~~nili~~~~ 167 (219)
.++-+|..|.++..++... ..++....+++.-.+.++.. +--.+ ++|.|++|.|+++-.+.
T Consensus 321 vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~vDN--FvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIVDN--FVHADLHPGNVLIRFNK 382 (565)
T ss_pred eeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHhhc--ceecccCCCcEEEEecC
Confidence 3455677777887776543 34444455554444444333 33446 89999999999986443
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.11 E-value=0.058 Score=41.33 Aligned_cols=86 Identities=20% Similarity=0.299 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhCCCCceEEEEEEecCCCceEEEEeccccCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 027788 71 ERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPC 150 (219)
Q Consensus 71 ~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qv~~~l~~lh~~~~~ 150 (219)
..+.++..+++++. .|+++.. .+....=++.|+|-..... ..-.+..+ +..+...|+..+.
T Consensus 103 ~~y~nky~v~Armh--GilrL~N----Dn~~~yGvIlE~Cy~~~i~------------~~N~i~ag-i~~L~~fH~~~~~ 163 (308)
T PF07387_consen 103 ALYFNKYRVFARMH--GILRLKN----DNNYKYGVILERCYKIKIN------------FSNFITAG-IKDLMDFHSENQH 163 (308)
T ss_pred hhhhhhhhHHHHhh--heeEeec----CCCceeEEEEeeccCcccc------------hhHHHHHh-HHHHHHhhccCCC
Confidence 44577888887764 2555541 1223333577887432111 01111222 3557788977667
Q ss_pred eeeeCCCCCceEEeCCCCcEEEeccc
Q 027788 151 VIHRDLNCSNVFVNGNTGQVKIGDLG 176 (219)
Q Consensus 151 i~h~dl~~~nili~~~~~~~~l~dfg 176 (219)
.+|+|..|+||+-+++ |.+|+.|=+
T Consensus 164 ~lHGD~np~NiM~D~~-G~lKlVDP~ 188 (308)
T PF07387_consen 164 CLHGDCNPDNIMCDKF-GYLKLVDPV 188 (308)
T ss_pred eecCCCChhheeecCC-CCEEecChh
Confidence 9999999999999966 689988754
No 495
>PTZ00296 choline kinase; Provisional
Probab=92.58 E-value=2.2 Score=36.30 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=26.4
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceecccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRA 184 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~ 184 (219)
.+.|+|+.+.||+.+.+ .++++||..|....+.
T Consensus 285 VfCHNDl~~~NiL~~~~--~l~LIDfEYAg~ndpa 317 (442)
T PTZ00296 285 VFCHNDLQENNIINTNK--CLRLIDFEYSGYNFLA 317 (442)
T ss_pred eEEeCCCCccceeecCC--CEEEEeecccccccHH
Confidence 37999999999987633 5999999988765543
No 496
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=92.27 E-value=0.81 Score=35.83 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=47.9
Q ss_pred eeccccceEEEEEEecCCCcEEEEEEeeecccCCCHHHHHHHHHHH---HHHHhhCCCCceEEEEEEecCCCceEEEEec
Q 027788 32 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEV---RLLKTLANKNIISLHYVWRDEDRNTLNFITE 108 (219)
Q Consensus 32 ~ig~g~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~---~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 108 (219)
.+..|..+.|+.++ ..+|...++|+...... ...|. ..|+..+-...+++++.-.. . -.+++|
T Consensus 9 ~~~~g~~s~V~pv~-~~dG~~avLKl~~p~~~---------~~~E~~g~~~L~~w~G~GaVrll~~d~~--~--~AlLLE 74 (253)
T PF04655_consen 9 PPAHGSSSLVVPVR-RADGTPAVLKLAPPHAE---------AEHEARGEAALRWWNGRGAVRLLAADPE--R--GALLLE 74 (253)
T ss_pred CCCCCcceEEEEEE-cCCCCeEEEEecCCccc---------chhhhhHHhHhheeCCCCceeeeccccc--c--chhhhh
Confidence 45678899999997 56899999998653211 11233 45777777778888876422 2 245888
Q ss_pred cc-cCCChHHH
Q 027788 109 VC-TSGNLREY 118 (219)
Q Consensus 109 ~~-~~g~L~~~ 118 (219)
++ ++.+|.+.
T Consensus 75 rl~~g~~L~~~ 85 (253)
T PF04655_consen 75 RLDPGRSLASL 85 (253)
T ss_pred hccCCCchhhc
Confidence 88 55566543
No 497
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=92.22 E-value=0.11 Score=39.28 Aligned_cols=36 Identities=36% Similarity=0.540 Sum_probs=22.6
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEeccccceeccccc
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGRAI 185 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~~~~~~ 185 (219)
.+.|+|+.+.||+++...+.++++||..|.......
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~f 179 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAF 179 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHH
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhhccchh
Confidence 378999999999993344689999999997665433
No 498
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=92.20 E-value=0.46 Score=38.07 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=24.4
Q ss_pred CeeeeCCCCCceEEeCCCCcEEEecccccee
Q 027788 150 CVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI 180 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~~~~~l~dfg~a~~ 180 (219)
.++|+|+++.|++++. +.+.++||+.+..
T Consensus 188 ~liHgD~~~~Nil~~~--~~i~lIDfd~~~~ 216 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD--NEVYVIDFDYCTI 216 (313)
T ss_pred ceEcCCCCcccEEEeC--CcEEEEECccccc
Confidence 3899999999999985 3689999997654
No 499
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=91.18 E-value=0.31 Score=39.83 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh-----CCCCeeeeCCCCCceEEeCCCC-----------------cEEEeccccceeccc
Q 027788 127 VKALKKWSKQILKGLNYLHT-----HEPCVIHRDLNCSNVFVNGNTG-----------------QVKIGDLGVAAIVGR 183 (219)
Q Consensus 127 ~~~~~~i~~qv~~~l~~lh~-----~~~~i~h~dl~~~nili~~~~~-----------------~~~l~dfg~a~~~~~ 183 (219)
.+-+..+..|++. .|+-- +.+ .+|.||||+|||+.+... ..++-||.+|..-.-
T Consensus 274 ~~YvkfifLQiaL--LyikIYelp~c~n-F~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~i 349 (434)
T PF05445_consen 274 VEYVKFIFLQIAL--LYIKIYELPCCTN-FLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVANI 349 (434)
T ss_pred HHHHHHHHHHHHH--HHeeeecCCCcce-eeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhccc
Confidence 4456667777743 44221 211 899999999999853321 346667777665433
No 500
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.88 E-value=0.26 Score=36.95 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=27.3
Q ss_pred CeeeeCCCCCceEEeCCC-C---cEEEeccccceecccc
Q 027788 150 CVIHRDLNCSNVFVNGNT-G---QVKIGDLGVAAIVGRA 184 (219)
Q Consensus 150 ~i~h~dl~~~nili~~~~-~---~~~l~dfg~a~~~~~~ 184 (219)
.++|||+.+.|+++..+. + .+.++||..+..-.+.
T Consensus 121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~ 159 (196)
T smart00587 121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA 159 (196)
T ss_pred EEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence 489999999999997542 2 5789999998765443
Done!