Query 027798
Match_columns 218
No_of_seqs 184 out of 1600
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 15:21:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027798.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027798hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13288 pyrophosphatase PpaX; 99.9 2.8E-22 6.1E-27 166.0 17.4 167 38-217 37-210 (214)
2 COG0546 Gph Predicted phosphat 99.9 1E-21 2.3E-26 164.1 19.0 138 67-217 69-217 (220)
3 TIGR01454 AHBA_synth_RP 3-amin 99.9 1.3E-21 2.8E-26 161.1 17.3 184 14-217 13-203 (205)
4 PRK13225 phosphoglycolate phos 99.9 2.2E-21 4.8E-26 167.5 18.3 168 38-217 96-267 (273)
5 TIGR01449 PGP_bact 2-phosphogl 99.9 5.5E-21 1.2E-25 157.5 17.9 125 86-217 82-213 (213)
6 TIGR01422 phosphonatase phosph 99.9 2.2E-21 4.7E-26 164.8 15.4 122 86-217 96-252 (253)
7 PRK13226 phosphoglycolate phos 99.9 1.5E-20 3.3E-25 157.8 17.8 166 37-217 45-224 (229)
8 TIGR03351 PhnX-like phosphonat 99.9 2.2E-20 4.7E-25 155.1 16.1 153 54-217 55-219 (220)
9 PLN02770 haloacid dehalogenase 99.8 1.3E-19 2.8E-24 154.1 17.1 115 86-212 105-230 (248)
10 PRK13478 phosphonoacetaldehyde 99.8 1.6E-19 3.4E-24 154.8 17.2 123 85-217 97-254 (267)
11 PRK13223 phosphoglycolate phos 99.8 2.9E-19 6.3E-24 154.0 17.2 123 87-216 99-228 (272)
12 PRK13222 phosphoglycolate phos 99.8 2.1E-18 4.5E-23 143.2 18.1 146 61-217 69-221 (226)
13 PLN03243 haloacid dehalogenase 99.8 2.3E-18 4.9E-23 147.7 15.9 115 87-215 107-232 (260)
14 PRK10563 6-phosphogluconate ph 99.8 1.9E-18 4E-23 143.7 13.5 123 86-217 85-212 (221)
15 TIGR02253 CTE7 HAD superfamily 99.8 1.1E-17 2.3E-22 138.8 15.8 116 87-213 92-220 (221)
16 PLN02575 haloacid dehalogenase 99.8 1.1E-17 2.3E-22 150.0 16.7 114 86-213 213-337 (381)
17 PRK10826 2-deoxyglucose-6-phos 99.8 1.1E-17 2.5E-22 139.2 14.1 122 86-215 89-217 (222)
18 PRK09449 dUMP phosphatase; Pro 99.8 7.4E-18 1.6E-22 140.2 12.2 122 84-218 90-223 (224)
19 PRK06698 bifunctional 5'-methy 99.8 2.7E-17 5.9E-22 151.3 15.9 120 87-217 328-453 (459)
20 PRK10748 flavin mononucleotide 99.7 2.2E-17 4.8E-22 139.4 13.9 149 50-217 79-238 (238)
21 PRK11587 putative phosphatase; 99.7 3.5E-17 7.7E-22 136.1 14.5 114 86-214 80-204 (218)
22 PRK14988 GMP/IMP nucleotidase; 99.7 3.6E-17 7.8E-22 137.2 14.4 120 86-217 90-221 (224)
23 TIGR02254 YjjG/YfnB HAD superf 99.7 2.6E-17 5.6E-22 136.3 12.0 119 86-217 94-224 (224)
24 PLN02940 riboflavin kinase 99.7 6.1E-17 1.3E-21 145.9 15.2 116 86-214 90-217 (382)
25 PLN02811 hydrolase 99.7 3.7E-17 8.1E-22 136.3 12.3 118 86-213 75-206 (220)
26 PRK06769 hypothetical protein; 99.7 9.1E-18 2E-22 135.6 8.0 124 87-217 26-171 (173)
27 PHA02597 30.2 hypothetical pro 99.7 8E-17 1.7E-21 131.7 12.3 159 37-215 28-196 (197)
28 TIGR01428 HAD_type_II 2-haloal 99.7 2.4E-16 5.3E-21 128.8 13.2 94 87-189 90-194 (198)
29 TIGR01990 bPGM beta-phosphoglu 99.7 3.5E-16 7.6E-21 126.0 12.6 93 88-187 86-185 (185)
30 TIGR01685 MDP-1 magnesium-depe 99.7 6.4E-17 1.4E-21 130.9 8.3 105 86-195 42-165 (174)
31 PLN02779 haloacid dehalogenase 99.7 2.5E-16 5.3E-21 136.8 12.4 113 88-214 143-269 (286)
32 TIGR01993 Pyr-5-nucltdase pyri 99.7 1.9E-16 4.1E-21 128.2 10.0 91 87-186 82-184 (184)
33 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 4.8E-16 1E-20 125.2 12.0 93 87-186 86-185 (185)
34 TIGR00213 GmhB_yaeD D,D-heptos 99.7 2E-16 4.4E-21 127.8 9.6 119 86-214 23-175 (176)
35 PRK10725 fructose-1-P/6-phosph 99.7 8.5E-16 1.8E-20 124.3 13.1 96 86-187 85-186 (188)
36 PF13419 HAD_2: Haloacid dehal 99.7 2.6E-16 5.6E-21 123.9 8.9 92 86-186 74-176 (176)
37 PRK08942 D,D-heptose 1,7-bisph 99.7 5.9E-16 1.3E-20 125.4 10.8 120 86-217 26-176 (181)
38 COG0637 Predicted phosphatase/ 99.7 6.1E-16 1.3E-20 129.6 10.8 121 85-216 82-215 (221)
39 PLN02919 haloacid dehalogenase 99.6 5.2E-15 1.1E-19 147.9 16.8 113 89-213 161-285 (1057)
40 COG1011 Predicted hydrolase (H 99.6 6.2E-16 1.4E-20 128.4 8.5 119 87-217 97-226 (229)
41 PRK09456 ?-D-glucose-1-phospha 99.6 2.6E-15 5.6E-20 123.3 10.9 102 88-197 83-195 (199)
42 TIGR02252 DREG-2 REG-2-like, H 99.6 2.9E-15 6.2E-20 122.8 10.1 88 88-185 104-203 (203)
43 TIGR01261 hisB_Nterm histidino 99.6 3.1E-15 6.8E-20 119.7 7.8 99 86-191 26-151 (161)
44 TIGR01509 HAD-SF-IA-v3 haloaci 99.6 1.3E-14 2.8E-19 116.2 10.9 93 88-186 84-183 (183)
45 TIGR02247 HAD-1A3-hyp Epoxide 99.6 3.6E-15 7.8E-20 123.1 6.8 101 87-196 92-205 (211)
46 TIGR01691 enolase-ppase 2,3-di 99.6 2.1E-14 4.5E-19 120.4 11.1 97 86-191 92-200 (220)
47 TIGR01672 AphA HAD superfamily 99.6 1.5E-14 3.3E-19 122.4 9.9 100 85-194 110-218 (237)
48 TIGR01656 Histidinol-ppas hist 99.5 2.4E-14 5.3E-19 112.4 7.4 98 87-189 25-147 (147)
49 PRK11009 aphA acid phosphatase 99.5 1.4E-13 2.9E-18 116.6 10.4 96 85-193 110-217 (237)
50 PHA02530 pseT polynucleotide k 99.5 5.3E-14 1.1E-18 122.2 7.2 95 88-190 186-299 (300)
51 TIGR01668 YqeG_hyp_ppase HAD s 99.5 1.2E-13 2.5E-18 111.3 7.8 99 88-196 42-145 (170)
52 TIGR01548 HAD-SF-IA-hyp1 haloa 99.5 8.6E-13 1.9E-17 108.0 13.0 82 89-179 106-197 (197)
53 TIGR01662 HAD-SF-IIIA HAD-supe 99.5 1.6E-13 3.4E-18 105.4 7.6 93 88-187 24-131 (132)
54 TIGR01549 HAD-SF-IA-v1 haloaci 99.4 1.6E-12 3.4E-17 102.0 12.2 84 86-180 61-154 (154)
55 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 1.8E-13 3.9E-18 109.5 6.5 80 87-179 88-175 (175)
56 smart00577 CPDc catalytic doma 99.4 2.3E-13 5E-18 107.1 5.9 87 88-183 44-138 (148)
57 PRK13582 thrH phosphoserine ph 99.4 6E-12 1.3E-16 103.1 14.4 118 85-217 64-195 (205)
58 PLN02954 phosphoserine phospha 99.4 2.5E-12 5.5E-17 106.9 11.5 120 88-217 83-223 (224)
59 TIGR01664 DNA-3'-Pase DNA 3'-p 99.4 6.8E-13 1.5E-17 106.6 6.9 89 90-185 43-160 (166)
60 TIGR00338 serB phosphoserine p 99.4 3.4E-12 7.3E-17 105.8 9.7 121 85-216 81-218 (219)
61 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.4 2.8E-13 6E-18 116.0 3.1 124 89-217 120-254 (257)
62 TIGR01452 PGP_euk phosphoglyco 99.4 2.4E-13 5.2E-18 117.5 2.4 120 89-213 143-279 (279)
63 PRK09552 mtnX 2-hydroxy-3-keto 99.3 7.2E-12 1.6E-16 104.4 10.8 115 86-217 71-212 (219)
64 PRK05446 imidazole glycerol-ph 99.3 6.6E-12 1.4E-16 111.9 11.0 99 84-189 25-150 (354)
65 TIGR01489 DKMTPPase-SF 2,3-dik 99.3 1.6E-11 3.4E-16 98.8 11.3 88 87-182 70-184 (188)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.3 1.4E-11 3E-16 100.3 8.2 100 85-189 76-192 (201)
67 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 6.3E-12 1.4E-16 96.7 5.0 79 89-172 29-124 (128)
68 PLN02645 phosphoglycolate phos 99.3 3.8E-12 8.1E-17 111.8 4.0 111 103-218 187-308 (311)
69 cd01427 HAD_like Haloacid deha 99.2 3.9E-11 8.5E-16 90.0 7.0 95 87-186 22-139 (139)
70 PF13242 Hydrolase_like: HAD-h 99.2 2E-11 4.3E-16 85.2 4.9 70 140-213 5-75 (75)
71 TIGR01670 YrbI-phosphatas 3-de 99.2 7.7E-11 1.7E-15 93.4 7.6 85 95-190 37-121 (154)
72 KOG2914 Predicted haloacid-hal 99.2 1.7E-10 3.6E-15 96.7 9.6 117 85-213 88-218 (222)
73 TIGR02137 HSK-PSP phosphoserin 99.2 9.2E-10 2E-14 91.2 13.8 116 86-217 65-195 (203)
74 KOG3085 Predicted hydrolase (H 99.1 5.1E-11 1.1E-15 100.4 5.6 92 88-189 112-215 (237)
75 TIGR01525 ATPase-IB_hvy heavy 99.1 1.1E-10 2.3E-15 110.1 8.5 113 87-217 382-499 (556)
76 TIGR03333 salvage_mtnX 2-hydro 99.1 6.8E-10 1.5E-14 92.2 12.2 117 87-217 68-208 (214)
77 TIGR02726 phenyl_P_delta pheny 99.1 1.7E-10 3.8E-15 93.0 6.4 79 96-184 44-122 (169)
78 PRK09484 3-deoxy-D-manno-octul 99.1 5.9E-10 1.3E-14 90.8 9.2 106 96-216 58-167 (183)
79 TIGR01512 ATPase-IB2_Cd heavy 99.1 3.6E-10 7.8E-15 106.2 9.0 115 87-217 360-478 (536)
80 KOG3109 Haloacid dehalogenase- 99.1 2.1E-09 4.6E-14 88.8 11.6 95 88-190 99-208 (244)
81 PRK11133 serB phosphoserine ph 99.1 8.6E-10 1.9E-14 97.5 9.7 122 84-216 176-314 (322)
82 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.0 5E-09 1.1E-13 85.6 10.5 114 58-185 65-196 (202)
83 TIGR01511 ATPase-IB1_Cu copper 99.0 2.9E-09 6.3E-14 100.6 9.6 111 88-217 404-518 (562)
84 TIGR02244 HAD-IG-Ncltidse HAD 99.0 1.8E-09 4E-14 95.9 7.7 92 87-187 182-323 (343)
85 PRK10444 UMP phosphatase; Prov 98.9 4E-10 8.6E-15 96.1 3.1 71 140-214 175-246 (248)
86 TIGR01544 HAD-SF-IE haloacid d 98.9 6.6E-08 1.4E-12 83.6 16.8 153 37-208 80-262 (277)
87 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.9 3.2E-10 6.9E-15 96.6 2.5 120 89-213 121-249 (249)
88 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 9.2E-10 2E-14 93.2 1.7 91 91-187 140-241 (242)
89 COG2179 Predicted hydrolase of 98.8 1.8E-08 3.9E-13 80.2 8.5 86 88-187 45-138 (175)
90 TIGR01488 HAD-SF-IB Haloacid D 98.8 3.7E-08 8E-13 78.5 10.3 86 86-172 70-174 (177)
91 TIGR01686 FkbH FkbH-like domai 98.8 7E-09 1.5E-13 91.5 6.4 86 88-182 30-125 (320)
92 PF00702 Hydrolase: haloacid d 98.8 9.1E-09 2E-13 84.0 6.3 81 88-180 126-215 (215)
93 COG0241 HisB Histidinol phosph 98.8 4.2E-08 9.1E-13 79.7 9.6 99 87-192 29-154 (181)
94 PRK10671 copA copper exporting 98.8 1.3E-08 2.9E-13 100.2 7.6 112 88-217 649-764 (834)
95 TIGR01663 PNK-3'Pase polynucle 98.8 1.5E-08 3.3E-13 94.7 7.3 85 90-181 198-305 (526)
96 TIGR02251 HIF-SF_euk Dullard-l 98.7 2.7E-08 5.8E-13 79.6 5.0 91 88-187 41-139 (162)
97 PRK08238 hypothetical protein; 98.6 1.5E-07 3.2E-12 87.4 9.9 89 88-190 71-168 (479)
98 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 1.8E-07 3.9E-12 79.1 7.1 85 86-172 21-111 (242)
99 TIGR01522 ATPase-IIA2_Ca golgi 98.5 3.8E-07 8.2E-12 90.5 9.0 116 89-217 528-670 (884)
100 PF12689 Acid_PPase: Acid Phos 98.5 7.5E-07 1.6E-11 71.8 8.2 96 86-191 42-155 (169)
101 PRK11033 zntA zinc/cadmium/mer 98.5 9.6E-07 2.1E-11 86.1 10.1 110 88-217 567-680 (741)
102 TIGR01533 lipo_e_P4 5'-nucleot 98.3 3.6E-06 7.8E-11 72.6 9.3 81 87-172 116-204 (266)
103 COG0560 SerB Phosphoserine pho 98.3 1.2E-05 2.7E-10 67.0 11.6 93 88-185 76-185 (212)
104 PF06888 Put_Phosphatase: Puta 98.2 3.2E-05 6.9E-10 65.5 12.8 108 86-198 68-208 (234)
105 TIGR01456 CECR5 HAD-superfamil 98.2 1.3E-06 2.9E-11 77.0 4.1 57 156-217 263-320 (321)
106 PRK11590 hypothetical protein; 98.2 3.6E-05 7.7E-10 63.8 11.7 108 59-184 73-200 (211)
107 COG4087 Soluble P-type ATPase 98.1 1E-05 2.2E-10 62.1 7.2 115 88-217 29-146 (152)
108 COG0647 NagD Predicted sugar p 98.1 2.1E-06 4.5E-11 74.1 3.8 66 144-217 199-265 (269)
109 PF09419 PGP_phosphatase: Mito 98.1 2.7E-05 5.9E-10 62.7 9.8 93 88-189 58-166 (168)
110 PRK10530 pyridoxal phosphate ( 98.1 1.6E-05 3.6E-10 67.6 8.0 106 90-205 138-255 (272)
111 TIGR01116 ATPase-IIA1_Ca sarco 98.0 2.2E-05 4.8E-10 78.4 8.9 115 89-217 537-682 (917)
112 TIGR02250 FCP1_euk FCP1-like p 98.0 1.7E-05 3.6E-10 63.1 6.2 81 87-172 56-143 (156)
113 TIGR01460 HAD-SF-IIA Haloacid 98.0 7.7E-06 1.7E-10 69.1 4.3 81 104-189 146-236 (236)
114 KOG2882 p-Nitrophenyl phosphat 97.9 1.9E-05 4.1E-10 68.5 5.7 73 140-216 225-302 (306)
115 PTZ00445 p36-lilke protein; Pr 97.9 2.7E-05 5.9E-10 64.6 6.3 93 90-187 76-205 (219)
116 COG4229 Predicted enolase-phos 97.9 7.2E-05 1.6E-09 60.7 8.2 93 88-188 102-205 (229)
117 PF08645 PNK3P: Polynucleotide 97.8 3.5E-05 7.6E-10 61.5 5.6 88 90-184 30-153 (159)
118 TIGR01545 YfhB_g-proteo haloac 97.8 0.00026 5.7E-09 58.8 10.9 109 58-184 71-199 (210)
119 PF12710 HAD: haloacid dehalog 97.7 0.00011 2.5E-09 58.8 7.4 77 92-172 92-191 (192)
120 KOG3040 Predicted sugar phosph 97.7 9.3E-06 2E-10 67.1 0.2 66 144-217 190-256 (262)
121 KOG3120 Predicted haloacid deh 97.7 9.4E-05 2E-09 61.7 5.8 103 86-192 81-215 (256)
122 PLN02645 phosphoglycolate phos 97.6 0.00021 4.5E-09 62.8 7.3 88 88-185 43-136 (311)
123 TIGR01684 viral_ppase viral ph 97.5 0.00013 2.9E-09 63.5 5.4 47 92-139 149-198 (301)
124 TIGR02463 MPGP_rel mannosyl-3- 97.5 0.00036 7.7E-09 57.8 7.2 75 104-184 140-219 (221)
125 KOG1615 Phosphoserine phosphat 97.5 0.0011 2.4E-08 54.4 9.5 83 87-172 86-189 (227)
126 COG4359 Uncharacterized conser 97.5 0.00085 1.9E-08 54.6 8.6 87 86-181 70-180 (220)
127 COG1778 Low specificity phosph 97.4 0.0002 4.3E-09 56.7 4.1 80 95-184 44-123 (170)
128 PF05761 5_nucleotid: 5' nucle 97.3 0.00041 9E-09 64.0 5.7 89 91-187 185-324 (448)
129 PHA03398 viral phosphatase sup 97.3 0.0005 1.1E-08 60.0 5.4 51 91-142 150-204 (303)
130 TIGR01497 kdpB K+-transporting 97.2 0.0016 3.5E-08 63.0 8.3 111 89-217 446-560 (675)
131 COG4996 Predicted phosphatase 97.1 0.0014 3.1E-08 50.6 6.2 85 87-172 39-132 (164)
132 PRK01122 potassium-transportin 97.1 0.003 6.5E-08 61.3 9.0 111 89-217 445-559 (679)
133 PRK01158 phosphoglycolate phos 97.0 0.0014 3E-08 54.3 5.3 76 104-187 117-199 (230)
134 COG2217 ZntA Cation transport 97.0 0.0037 8.1E-08 60.8 8.9 111 89-217 537-651 (713)
135 TIGR01487 SPP-like sucrose-pho 97.0 0.0016 3.5E-08 53.7 5.5 76 104-184 109-187 (215)
136 PRK00192 mannosyl-3-phosphogly 96.9 0.0024 5.3E-08 54.8 6.3 73 109-189 158-235 (273)
137 PRK14010 potassium-transportin 96.9 0.0045 9.7E-08 60.0 8.7 111 89-217 441-555 (673)
138 TIGR01647 ATPase-IIIA_H plasma 96.9 0.0056 1.2E-07 60.2 9.2 115 89-217 442-586 (755)
139 TIGR01524 ATPase-IIIB_Mg magne 96.8 0.007 1.5E-07 60.4 9.3 114 89-217 515-654 (867)
140 TIGR01482 SPP-subfamily Sucros 96.7 0.0065 1.4E-07 50.1 7.5 77 105-187 110-191 (225)
141 PRK10517 magnesium-transportin 96.7 0.0073 1.6E-07 60.5 8.6 114 89-216 550-688 (902)
142 TIGR01485 SPP_plant-cyano sucr 96.6 0.01 2.2E-07 50.2 8.1 46 140-189 167-212 (249)
143 PF06941 NT5C: 5' nucleotidase 96.6 0.003 6.6E-08 51.4 4.4 105 86-216 70-184 (191)
144 TIGR01517 ATPase-IIB_Ca plasma 96.6 0.012 2.5E-07 59.4 9.4 115 89-217 579-721 (941)
145 PRK15122 magnesium-transportin 96.6 0.0091 2E-07 59.8 8.4 115 89-217 550-689 (903)
146 TIGR00685 T6PP trehalose-phosp 96.4 0.0051 1.1E-07 52.1 4.8 66 140-217 167-239 (244)
147 TIGR02471 sucr_syn_bact_C sucr 96.3 0.027 5.8E-07 47.1 8.9 43 140-187 159-201 (236)
148 TIGR01523 ATPase-IID_K-Na pota 96.2 0.021 4.6E-07 58.2 8.9 116 89-217 646-798 (1053)
149 TIGR01675 plant-AP plant acid 95.9 0.068 1.5E-06 45.2 9.2 81 86-172 117-212 (229)
150 TIGR01106 ATPase-IIC_X-K sodiu 95.8 0.041 8.9E-07 55.8 8.9 115 89-216 568-735 (997)
151 TIGR01484 HAD-SF-IIB HAD-super 95.5 0.013 2.8E-07 47.7 3.1 41 140-184 163-203 (204)
152 KOG0207 Cation transport ATPas 95.4 0.076 1.7E-06 52.5 8.6 109 89-215 723-835 (951)
153 PF05822 UMPH-1: Pyrimidine 5' 95.3 0.39 8.5E-06 41.0 11.7 145 44-209 59-231 (246)
154 TIGR01494 ATPase_P-type ATPase 95.3 0.074 1.6E-06 49.7 8.1 78 88-181 346-427 (499)
155 PF13344 Hydrolase_6: Haloacid 95.3 0.025 5.5E-07 41.5 3.9 72 87-165 12-89 (101)
156 COG2503 Predicted secreted aci 95.3 0.12 2.5E-06 44.1 8.2 81 87-172 120-209 (274)
157 TIGR01452 PGP_euk phosphoglyco 95.1 0.062 1.3E-06 46.3 6.5 72 88-165 17-94 (279)
158 KOG2630 Enolase-phosphatase E- 94.8 0.15 3.2E-06 43.1 7.5 94 87-189 121-226 (254)
159 PF03031 NIF: NLI interacting 94.6 0.021 4.5E-07 44.8 2.0 80 88-172 35-122 (159)
160 COG3700 AphA Acid phosphatase 94.6 0.13 2.8E-06 42.0 6.5 99 84-191 109-215 (237)
161 TIGR00099 Cof-subfamily Cof su 94.1 0.13 2.8E-06 43.4 5.9 40 140-183 188-227 (256)
162 COG0647 NagD Predicted sugar p 94.0 0.11 2.3E-06 45.1 5.3 52 86-137 21-78 (269)
163 TIGR02461 osmo_MPG_phos mannos 93.8 0.078 1.7E-06 44.4 3.9 41 140-184 181-223 (225)
164 COG4030 Uncharacterized protei 93.8 0.9 1.9E-05 38.6 10.1 38 88-126 82-121 (315)
165 PF03767 Acid_phosphat_B: HAD 93.4 0.062 1.3E-06 45.3 2.7 79 88-172 114-208 (229)
166 TIGR01486 HAD-SF-IIB-MPGP mann 93.4 0.18 4E-06 42.6 5.6 45 140-189 176-222 (256)
167 COG0474 MgtA Cation transport 93.1 0.59 1.3E-05 47.1 9.6 87 88-183 546-661 (917)
168 TIGR01652 ATPase-Plipid phosph 93.1 0.47 1E-05 48.5 9.0 38 89-127 631-671 (1057)
169 KOG2470 Similar to IMP-GMP spe 93.0 0.19 4.2E-06 45.0 5.3 91 92-186 243-374 (510)
170 PRK10513 sugar phosphate phosp 93.0 0.13 2.8E-06 43.6 4.1 43 140-187 196-238 (270)
171 TIGR01657 P-ATPase-V P-type AT 92.8 0.48 1E-05 48.5 8.5 39 88-127 655-696 (1054)
172 COG5663 Uncharacterized conser 92.5 0.57 1.2E-05 37.8 6.8 91 90-193 73-167 (194)
173 PRK10976 putative hydrolase; P 92.4 0.1 2.2E-06 44.2 2.7 43 140-187 190-232 (266)
174 TIGR01658 EYA-cons_domain eyes 92.0 0.65 1.4E-05 39.7 7.0 79 105-189 178-259 (274)
175 smart00775 LNS2 LNS2 domain. T 91.4 1.7 3.6E-05 34.4 8.5 90 89-183 27-142 (157)
176 PF11019 DUF2608: Protein of u 91.3 1.4 3E-05 37.7 8.4 100 90-190 82-212 (252)
177 KOG0202 Ca2+ transporting ATPa 90.7 1.1 2.4E-05 44.4 7.9 85 88-181 583-698 (972)
178 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.3 0.55 1.2E-05 39.8 5.1 49 88-137 16-70 (249)
179 PF08282 Hydrolase_3: haloacid 90.1 0.27 5.8E-06 40.2 2.9 43 140-187 186-228 (254)
180 PRK15126 thiamin pyrimidine py 89.5 0.3 6.4E-06 41.6 2.8 43 140-187 188-230 (272)
181 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.1 0.41 8.9E-06 40.8 3.3 46 90-136 22-73 (257)
182 PRK03669 mannosyl-3-phosphogly 89.0 0.41 8.8E-06 40.9 3.3 43 140-187 187-232 (271)
183 PLN02382 probable sucrose-phos 88.7 0.66 1.4E-05 42.5 4.6 45 140-188 175-222 (413)
184 KOG2961 Predicted hydrolase (H 88.5 0.38 8.3E-06 38.3 2.5 34 155-192 138-172 (190)
185 TIGR01680 Veg_Stor_Prot vegeta 88.4 2.9 6.3E-05 36.3 8.0 80 87-172 143-238 (275)
186 PF06189 5-nucleotidase: 5'-nu 86.5 1.8 3.9E-05 37.3 5.6 76 103-191 187-262 (264)
187 PLN02887 hydrolase family prot 86.3 0.59 1.3E-05 44.8 2.9 43 140-187 507-549 (580)
188 KOG2882 p-Nitrophenyl phosphat 85.7 3.4 7.5E-05 36.3 7.1 89 87-186 36-131 (306)
189 PF05116 S6PP: Sucrose-6F-phos 85.5 1.4 3E-05 37.4 4.5 44 140-188 165-208 (247)
190 PRK10187 trehalose-6-phosphate 84.5 2 4.3E-05 36.8 5.1 44 140-187 174-220 (266)
191 COG0561 Cof Predicted hydrolas 84.4 0.73 1.6E-05 39.0 2.3 39 140-182 189-227 (264)
192 PRK10444 UMP phosphatase; Prov 83.2 2 4.2E-05 36.6 4.5 47 89-136 17-69 (248)
193 KOG3128 Uncharacterized conser 82.7 16 0.00035 31.6 9.6 139 37-195 97-265 (298)
194 PF05152 DUF705: Protein of un 82.6 2.5 5.4E-05 36.9 4.9 48 90-138 143-193 (297)
195 TIGR02245 HAD_IIID1 HAD-superf 82.6 7.1 0.00015 32.2 7.4 89 89-184 45-153 (195)
196 PLN03190 aminophospholipid tra 81.1 10 0.00022 39.6 9.4 33 89-121 726-761 (1178)
197 PRK00192 mannosyl-3-phosphogly 80.7 2.6 5.6E-05 36.0 4.4 41 89-130 21-64 (273)
198 COG2216 KdpB High-affinity K+ 80.4 4.1 8.8E-05 38.6 5.7 84 89-189 447-537 (681)
199 KOG0323 TFIIF-interacting CTD 80.4 2.4 5.1E-05 41.0 4.3 52 87-139 199-254 (635)
200 KOG2469 IMP-GMP specific 5'-nu 79.8 7.4 0.00016 35.6 7.0 91 90-187 202-333 (424)
201 cd04728 ThiG Thiazole synthase 76.4 27 0.00058 30.0 9.1 96 87-192 102-209 (248)
202 TIGR01460 HAD-SF-IIA Haloacid 75.9 5.2 0.00011 33.5 4.7 48 88-136 13-67 (236)
203 PLN02423 phosphomannomutase 74.5 3.2 6.9E-05 35.1 3.1 39 140-187 189-231 (245)
204 PLN02177 glycerol-3-phosphate 73.2 55 0.0012 30.9 11.2 102 58-182 88-210 (497)
205 COG4502 5'(3')-deoxyribonucleo 72.5 12 0.00025 29.6 5.5 72 85-172 64-143 (180)
206 PTZ00174 phosphomannomutase; P 71.3 5.2 0.00011 33.7 3.7 40 140-187 188-231 (247)
207 PRK00208 thiG thiazole synthas 70.0 48 0.001 28.4 9.1 95 88-192 103-209 (250)
208 PRK14501 putative bifunctional 68.8 7.8 0.00017 38.1 4.8 43 141-189 658-700 (726)
209 COG4850 Uncharacterized conser 67.2 20 0.00043 32.1 6.4 81 87-171 194-293 (373)
210 PRK12702 mannosyl-3-phosphogly 66.0 17 0.00037 32.0 5.8 74 106-185 152-251 (302)
211 PRK10513 sugar phosphate phosp 64.1 16 0.00035 30.6 5.3 44 90-134 21-67 (270)
212 TIGR02461 osmo_MPG_phos mannos 63.9 13 0.00028 30.9 4.6 38 90-128 16-56 (225)
213 TIGR02463 MPGP_rel mannosyl-3- 63.6 13 0.00029 30.2 4.6 33 94-127 21-56 (221)
214 KOG3107 Predicted haloacid deh 63.3 22 0.00049 32.4 6.1 77 105-187 373-451 (468)
215 PRK14502 bifunctional mannosyl 59.4 12 0.00026 36.7 4.0 41 140-184 613-655 (694)
216 TIGR00236 wecB UDP-N-acetylglu 55.5 80 0.0017 27.7 8.4 78 104-190 31-120 (365)
217 PRK11840 bifunctional sulfur c 54.1 1.2E+02 0.0026 27.1 9.0 95 87-191 176-282 (326)
218 TIGR02329 propionate_PrpR prop 53.0 43 0.00092 31.8 6.5 82 94-189 86-172 (526)
219 KOG0206 P-type ATPase [General 52.8 2.1E+02 0.0046 30.1 11.6 37 89-126 651-690 (1151)
220 TIGR01487 SPP-like sucrose-pho 52.6 21 0.00047 28.9 4.0 40 89-129 18-60 (215)
221 PF06014 DUF910: Bacterial pro 52.2 9.6 0.00021 25.6 1.5 23 146-172 8-30 (62)
222 PRK01158 phosphoglycolate phos 52.2 24 0.00051 28.8 4.2 39 90-129 21-62 (230)
223 PRK12702 mannosyl-3-phosphogly 51.8 23 0.00051 31.2 4.2 39 90-129 19-60 (302)
224 COG3933 Transcriptional antite 51.4 34 0.00073 31.9 5.3 114 5-122 85-209 (470)
225 TIGR00099 Cof-subfamily Cof su 50.8 27 0.00059 29.1 4.5 38 90-128 17-57 (256)
226 COG0731 Fe-S oxidoreductases [ 50.5 47 0.001 29.2 5.9 44 86-136 89-136 (296)
227 PF08282 Hydrolase_3: haloacid 48.2 36 0.00078 27.4 4.7 37 90-127 16-55 (254)
228 PF02350 Epimerase_2: UDP-N-ac 48.1 78 0.0017 28.2 7.1 76 104-189 11-100 (346)
229 PRK15126 thiamin pyrimidine py 47.8 30 0.00065 29.2 4.3 40 89-129 19-61 (272)
230 TIGR01485 SPP_plant-cyano sucr 46.5 47 0.001 27.7 5.2 43 91-135 23-68 (249)
231 KOG1618 Predicted phosphatase 45.1 16 0.00034 32.7 2.1 35 153-191 294-344 (389)
232 COG0561 Cof Predicted hydrolas 45.0 34 0.00073 28.7 4.1 39 89-128 20-61 (264)
233 PRK10530 pyridoxal phosphate ( 44.9 38 0.00082 28.3 4.5 39 89-128 20-61 (272)
234 COG5610 Predicted hydrolase (H 44.8 78 0.0017 29.9 6.5 95 87-186 95-201 (635)
235 PLN02580 trehalose-phosphatase 44.5 52 0.0011 30.0 5.5 64 141-217 302-373 (384)
236 COG3882 FkbH Predicted enzyme 44.1 55 0.0012 31.0 5.5 72 95-180 261-347 (574)
237 PRK10976 putative hydrolase; P 42.7 33 0.00071 28.8 3.7 39 90-129 20-61 (266)
238 TIGR01486 HAD-SF-IIB-MPGP mann 41.8 49 0.0011 27.7 4.6 36 91-127 18-56 (256)
239 PRK03669 mannosyl-3-phosphogly 41.3 60 0.0013 27.4 5.2 37 90-127 25-64 (271)
240 CHL00162 thiG thiamin biosynth 41.2 1.6E+02 0.0035 25.5 7.5 95 87-191 116-222 (267)
241 PLN02205 alpha,alpha-trehalose 41.0 42 0.00092 33.9 4.7 33 140-172 762-797 (854)
242 PRK15424 propionate catabolism 40.4 79 0.0017 30.2 6.2 73 103-189 108-182 (538)
243 cd01481 vWA_collagen_alpha3-VI 37.7 51 0.0011 25.9 3.9 52 157-208 108-163 (165)
244 TIGR01456 CECR5 HAD-superfamil 36.7 31 0.00067 30.3 2.7 47 88-135 15-72 (321)
245 TIGR01482 SPP-subfamily Sucros 35.2 63 0.0014 26.0 4.2 38 90-128 16-56 (225)
246 TIGR02471 sucr_syn_bact_C sucr 35.0 85 0.0018 25.8 5.0 33 101-135 29-61 (236)
247 KOG3040 Predicted sugar phosph 34.1 1.4E+02 0.0031 25.3 6.0 39 89-127 23-66 (262)
248 PF06506 PrpR_N: Propionate ca 34.0 47 0.001 26.4 3.2 83 94-190 66-153 (176)
249 TIGR03568 NeuC_NnaA UDP-N-acet 33.8 2.8E+02 0.0062 24.6 8.5 25 159-187 283-307 (365)
250 KOG0204 Calcium transporting A 33.7 2.2E+02 0.0048 29.1 8.1 116 89-217 647-791 (1034)
251 PF04413 Glycos_transf_N: 3-De 33.4 31 0.00068 27.9 2.1 78 87-170 103-185 (186)
252 PLN02499 glycerol-3-phosphate 31.7 2.3E+02 0.005 26.9 7.7 66 57-136 73-138 (498)
253 PF03332 PMM: Eukaryotic phosp 31.0 29 0.00063 29.2 1.5 41 94-135 1-43 (220)
254 COG4483 Uncharacterized protei 29.7 44 0.00096 22.6 1.9 23 146-172 8-30 (68)
255 PF13086 AAA_11: AAA domain; P 29.4 57 0.0012 26.0 3.0 55 103-166 171-227 (236)
256 TIGR01484 HAD-SF-IIB HAD-super 28.7 78 0.0017 25.2 3.7 34 89-122 17-53 (204)
257 KOG2832 TFIIF-interacting CTD 27.7 1.5E+02 0.0032 27.0 5.4 73 90-167 215-294 (393)
258 PRK13762 tRNA-modifying enzyme 27.7 3.5E+02 0.0076 23.8 7.9 27 88-114 141-170 (322)
259 KOG3217 Protein tyrosine phosp 27.5 1.4E+02 0.0031 23.6 4.6 69 87-165 53-121 (159)
260 PF05783 DLIC: Dynein light in 26.6 1.3E+02 0.0027 28.4 5.1 35 38-72 114-148 (472)
261 TIGR01689 EcbF-BcbF capsule bi 26.1 1.5E+02 0.0032 22.5 4.6 43 89-134 24-84 (126)
262 KOG4549 Magnesium-dependent ph 26.0 3E+02 0.0065 21.4 6.1 78 88-167 43-133 (144)
263 PF07085 DRTGG: DRTGG domain; 25.7 1.3E+02 0.0027 21.5 4.0 33 159-195 43-76 (105)
264 PF08235 LNS2: LNS2 (Lipin/Ned 25.6 3.4E+02 0.0074 21.5 7.5 89 89-183 27-142 (157)
265 COG4126 Hydantoin racemase [Am 25.3 2.5E+02 0.0054 23.8 6.0 80 102-184 109-201 (230)
266 TIGR02990 ectoine_eutA ectoine 23.2 4.6E+02 0.0099 22.1 7.5 94 90-186 107-212 (239)
267 TIGR01286 nifK nitrogenase mol 22.9 5.4E+02 0.012 24.4 8.6 23 160-187 440-462 (515)
268 PF02358 Trehalose_PPase: Treh 22.9 69 0.0015 26.5 2.4 33 87-119 17-53 (235)
269 KOG2134 Polynucleotide kinase 22.3 1.3E+02 0.0029 27.6 4.1 25 89-113 104-131 (422)
270 PF02350 Epimerase_2: UDP-N-ac 21.9 3.8E+02 0.0083 23.7 7.1 57 131-200 239-296 (346)
271 PRK10187 trehalose-6-phosphate 21.7 1.1E+02 0.0023 26.1 3.4 36 89-125 36-75 (266)
272 KOG1605 TFIIF-interacting CTD 20.6 29 0.00064 30.0 -0.3 89 88-185 130-226 (262)
273 PF04230 PS_pyruv_trans: Polys 20.5 85 0.0019 25.3 2.5 27 159-189 259-285 (286)
274 PLN02580 trehalose-phosphatase 20.4 1.2E+02 0.0026 27.7 3.5 35 88-122 140-176 (384)
275 PF02593 dTMP_synthase: Thymid 20.0 3.2E+02 0.0068 22.9 5.7 71 89-165 59-142 (217)
276 COG0381 WecB UDP-N-acetylgluco 20.0 5E+02 0.011 23.8 7.3 83 104-191 34-127 (383)
277 PF03659 Glyco_hydro_71: Glyco 20.0 91 0.002 28.4 2.7 28 160-191 6-41 (386)
No 1
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.90 E-value=2.8e-22 Score=166.03 Aligned_cols=167 Identities=16% Similarity=0.053 Sum_probs=123.7
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
.+.+++...++......+... .+.........++..+. ........+|||+.++|+.| +.+++|+||+.+.
T Consensus 37 ~~~~~~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~ 110 (214)
T PRK13288 37 YKREDVLPFIGPSLHDTFSKI--DESKVEEMITTYREFNH----EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRD 110 (214)
T ss_pred CCHHHHHHHhCcCHHHHHHhc--CHHHHHHHHHHHHHHHH----HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 456677777665555555443 23333333333333321 11234467999999999988 4699999999999
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
.+...|+. +|+..+|+.|++++.. |+|+++.++..+.+.+|++|+||||+.+|+++| +++|+++++|.||+
T Consensus 111 ~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa----~~aG~~~i~v~~g~ 185 (214)
T PRK13288 111 TVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAG----KNAGTKTAGVAWTI 185 (214)
T ss_pred HHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHH----HHCCCeEEEEcCCC
Confidence 99999999 9999999999998653 777755444444444566699999999999999 99999999999999
Q ss_pred CCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 191 NTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 191 ~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..++++...+++ +.+.++.++.+++
T Consensus 186 ~~~~~l~~~~~~--~~i~~~~~l~~~i 210 (214)
T PRK13288 186 KGREYLEQYKPD--FMLDKMSDLLAIV 210 (214)
T ss_pred CCHHHHhhcCcC--EEECCHHHHHHHH
Confidence 887777666666 5566999998765
No 2
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.89 E-value=1e-21 Score=164.12 Aligned_cols=138 Identities=26% Similarity=0.386 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----
Q 027798 67 ELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---- 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---- 139 (218)
+....+++.|...+.+.. ...+|||+.++|+.| +.+++|+||+++..++..|++ +|+..+|+.++|.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~-~gl~~~F~~i~g~~~~~~~K 145 (220)
T COG0546 69 ELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKA-LGLADYFDVIVGGDDVPPPK 145 (220)
T ss_pred HHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-hCCccccceEEcCCCCCCCC
Confidence 344445554433322222 358999999999988 469999999999999999999 9999999999995433
Q ss_pred ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 140 PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 140 pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+|+ ++++++.. |++++||||+.+|+++| ++||+++++|.|||+.++.+...+++ +.+.++.||..
T Consensus 146 P~P~~l~~~~~~~~~~----~~~~l~VGDs~~Di~aA----~~Ag~~~v~v~~g~~~~~~l~~~~~d--~vi~~~~el~~ 215 (220)
T COG0546 146 PDPEPLLLLLEKLGLD----PEEALMVGDSLNDILAA----KAAGVPAVGVTWGYNSREELAQAGAD--VVIDSLAELLA 215 (220)
T ss_pred cCHHHHHHHHHHhCCC----hhheEEECCCHHHHHHH----HHcCCCEEEEECCCCCCcchhhcCCC--EEECCHHHHHH
Confidence 5555 44555554 45599999999999999 99999999999999766777777777 55559999887
Q ss_pred hc
Q 027798 216 KL 217 (218)
Q Consensus 216 ~~ 217 (218)
.+
T Consensus 216 ~l 217 (220)
T COG0546 216 LL 217 (220)
T ss_pred HH
Confidence 65
No 3
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.88 E-value=1.3e-21 Score=161.10 Aligned_cols=184 Identities=15% Similarity=0.133 Sum_probs=128.4
Q ss_pred HHHHHHHHHhcccccccccccccCCCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCccc
Q 027798 14 TLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPG 93 (218)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 93 (218)
.++..+++.+......|. +..+.+.+...++.....+++..+.+........ ...+ + ......+|||
T Consensus 13 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~-----~-~~~~~~~~~g 79 (205)
T TIGR01454 13 FAVMREAFAIAYREVVGD----GPAPFEEYRRHLGRYFPDIMRIMGLPLEMEEPFV---RESY-----R-LAGEVEVFPG 79 (205)
T ss_pred HHHHHHHHHHHHHHhcCC----CCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHH---HHHH-----H-hhcccccCCC
Confidence 345555655544332221 1345566555555556666666665432111111 1111 1 1245789999
Q ss_pred HHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceEEEcCch
Q 027798 94 VSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLHFVEDRL 166 (218)
Q Consensus 94 v~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+++.....+...+|++|+||||+.
T Consensus 80 ~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~ 158 (205)
T TIGR01454 80 VPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAV 158 (205)
T ss_pred HHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCH
Confidence 99999988 469999999999999999999 9999999999998653 666644443333333455599999999
Q ss_pred hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 167 ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 167 ~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+|+++| +++||++++|.||+++++++...+++ +.+.++.++.+.+
T Consensus 159 ~Di~aA----~~~Gi~~i~~~~g~~~~~~l~~~~~~--~~~~~~~~l~~~~ 203 (205)
T TIGR01454 159 TDLASA----RAAGTATVAALWGEGDAGELLAARPD--FLLRKPQSLLALC 203 (205)
T ss_pred HHHHHH----HHcCCeEEEEEecCCChhhhhhcCCC--eeeCCHHHHHHHh
Confidence 999999 99999999999999998888777777 5566999988765
No 4
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.88 E-value=2.2e-21 Score=167.46 Aligned_cols=168 Identities=20% Similarity=0.190 Sum_probs=124.6
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
.+.+.+....+.....+++..+.+.++..+....+.+.+ ..+.....+|||+.++|+.| +++++|+||+++.
T Consensus 96 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~ 170 (273)
T PRK13225 96 IDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQL-----GDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQ 170 (273)
T ss_pred CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHH-----HhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 444444333333445555666665444444444444433 22345678999999999998 4699999999999
Q ss_pred HHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 115 FVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 115 ~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
.++..|++ +|+..+|+.|++.+.. +||+++..+..+...+|++|+||||+..|+++| ++|||.+|+|.||+..+
T Consensus 171 ~~~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA----~~AG~~~I~v~~g~~~~ 245 (273)
T PRK13225 171 NIEAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAA----RQVGLIAVAVTWGFNDR 245 (273)
T ss_pred HHHHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHH----HHCCCeEEEEecCCCCH
Confidence 99999999 9999999999887765 888854443333333455599999999999999 99999999999999988
Q ss_pred HHHHhhcCCCceEEechhhHhhhc
Q 027798 194 KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 194 ~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++...+|+ +.+.++.+|.+++
T Consensus 246 ~~l~~~~ad--~~i~~~~eL~~~~ 267 (273)
T PRK13225 246 QSLVAACPD--WLLETPSDLLQAV 267 (273)
T ss_pred HHHHHCCCC--EEECCHHHHHHHH
Confidence 888777777 5566999887754
No 5
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.87 E-value=5.5e-21 Score=157.47 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=102.4
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
+...+|||+.++|+.| +.+++|+||+++..++..+++ +|+..+|+.++|++.. |+|+++..+..+.+.+|++
T Consensus 82 ~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 160 (213)
T TIGR01449 82 ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQ 160 (213)
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhH
Confidence 4568999999999988 369999999999999999999 9999999999998653 7777444443333345555
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+.+|+++| +++|+++++|.||+++.+.+...+++ +.+.++.+|...|
T Consensus 161 ~~~igDs~~d~~aa----~~aG~~~i~v~~g~~~~~~l~~~~a~--~~i~~~~~l~~~~ 213 (213)
T TIGR01449 161 MVYVGDSRVDIQAA----RAAGCPSVLLTYGYRYGEAIDLLPPD--VLYDSLNELPPLL 213 (213)
T ss_pred eEEeCCCHHHHHHH----HHCCCeEEEEccCCCCCcchhhcCCC--eEeCCHHHHHhhC
Confidence 99999999999999 99999999999999876666656666 5666999987653
No 6
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.87 E-value=2.2e-21 Score=164.82 Aligned_cols=122 Identities=13% Similarity=0.025 Sum_probs=100.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| +.+++|+||+++..++.+|++ +|+..+| |.|+|++.. |+|+ ++++++..
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~-- 172 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVY-- 172 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCC--
Confidence 4578999999999988 469999999999999999999 9999986 999998753 7777 55555542
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC----C-------------------HHHHHhhcCCCceEEech
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN----T-------------------PKERAEAASMPRIQLLQL 210 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~----~-------------------~~~l~~~~~~~~i~~~~l 210 (218)
+|++|+|||||.+|+++| ++|||.+|+|.||++ + .+++..++|+.+ +.++
T Consensus 173 -~~~~~l~IGDs~~Di~aA----~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v--~~~~ 245 (253)
T TIGR01422 173 -DVAACVKVGDTVPDIEEG----RNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYV--IDTL 245 (253)
T ss_pred -CchheEEECCcHHHHHHH----HHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEe--hhcH
Confidence 245599999999999999 999999999999987 2 356767777744 4599
Q ss_pred hhHhhhc
Q 027798 211 SDFCTKL 217 (218)
Q Consensus 211 ~el~~~~ 217 (218)
.||.+.+
T Consensus 246 ~el~~~~ 252 (253)
T TIGR01422 246 AELPAVI 252 (253)
T ss_pred HHHHHhh
Confidence 9987765
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.86 E-value=1.5e-20 Score=157.79 Aligned_cols=166 Identities=15% Similarity=0.097 Sum_probs=118.7
Q ss_pred CCCHHHHHHhHHHhHHHHHHhh--CCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCC
Q 027798 37 GLTVEGILENWLKIKPVIMEEW--SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSN 111 (218)
Q Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~ 111 (218)
..+.+.+...++......+... ..+.....+....+.+.|.. .......+|||+.++|+.| +.+++|+||+
T Consensus 45 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~ 120 (229)
T PRK13226 45 PITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEA----LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNK 120 (229)
T ss_pred CCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHH----hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCC
Confidence 3566666555554444444332 12333334444555554432 2223468999999999988 4699999999
Q ss_pred chHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 112 QSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 112 ~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+...+...+++ +|+..+|+.+++++.. |+|+ ++++++.+| ++|+||||+.+|+++| +++|+++
T Consensus 121 ~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p----~~~l~IGDs~~Di~aA----~~aG~~~ 191 (229)
T PRK13226 121 PEYLARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP----TDCVYVGDDERDILAA----RAAGMPS 191 (229)
T ss_pred CHHHHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh----hhEEEeCCCHHHHHHH----HHCCCcE
Confidence 99999999999 9999999999988642 7777 555666555 4499999999999999 9999999
Q ss_pred EEEeCCCCCH-HHHHhhcCCCceEEechhhHhhhc
Q 027798 184 YLVDWGYNTP-KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 184 i~v~~G~~~~-~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
++|.||+... +.+...+++ +.+.++.||.+.+
T Consensus 192 i~v~~g~~~~~~~~~~~~~~--~~i~~~~el~~~~ 224 (229)
T PRK13226 192 VAALWGYRLHDDDPLAWQAD--VLVEQPQLLWNPA 224 (229)
T ss_pred EEEeecCCCCCcChhhcCCC--eeeCCHHHHHHHh
Confidence 9999999743 334445666 5566888887654
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.85 E-value=2.2e-20 Score=155.10 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=114.2
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhh-hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC--
Q 027798 54 IMEEWSENREALIELSGKVRDEWMDTDFTTWI-GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-- 127 (218)
Q Consensus 54 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-- 127 (218)
++...+.+.+.+.+....+.+.+.. .+. ....++||+.++|+.| +.+++|+||+++..++..|++ +|+.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~-~~l~~~ 129 (220)
T TIGR03351 55 LLALDGADEAEAQAAFADFEERLAE----AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEK-LGWTVG 129 (220)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHH----HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-hhhhhh
Confidence 3344455544444455555544422 222 2357999999999998 469999999999999999999 9998
Q ss_pred CCCCeeEeCCCC----ChHHHHHHhhhcCCCC-CCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcC
Q 027798 128 ITPDRLYGLGTG----PKVNVLKQLQKKPEHQ-GLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAAS 201 (218)
Q Consensus 128 ~~fd~i~~~~~~----pKPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~ 201 (218)
.+|+.++|+++. |+|+++.....+.+.+ |++|+||||+.+|+++| +++||.+ +++.||+.+.+.+...++
T Consensus 130 ~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa----~~aG~~~~i~~~~g~~~~~~~~~~~~ 205 (220)
T TIGR03351 130 DDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAG----INAGAGAVVGVLTGAHDAEELSRHPH 205 (220)
T ss_pred ccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHH----HHCCCCeEEEEecCCCcHHHHhhcCC
Confidence 999999998653 7787444333333333 45699999999999999 9999999 999999988877766666
Q ss_pred CCceEEechhhHhhhc
Q 027798 202 MPRIQLLQLSDFCTKL 217 (218)
Q Consensus 202 ~~~i~~~~l~el~~~~ 217 (218)
+ ..+.++.+|.+.+
T Consensus 206 ~--~~i~~~~~l~~~~ 219 (220)
T TIGR03351 206 T--HVLDSVADLPALL 219 (220)
T ss_pred c--eeecCHHHHHHhh
Confidence 6 4555999987765
No 9
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.84 E-value=1.3e-19 Score=154.08 Aligned_cols=115 Identities=14% Similarity=0.051 Sum_probs=96.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +++++|+||+++..++..|++ +|+..||+.|+++++. |+|+ ++++++++|
T Consensus 105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~-- 181 (248)
T PLN02770 105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK-- 181 (248)
T ss_pred hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh--
Confidence 4578999999999988 469999999999999999999 9999999999998753 6666 556666554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e 212 (218)
++|+||||+..|+++| +++|+++|+|.||+ ..+.+...+++ +.+.++.|
T Consensus 182 --~~~l~vgDs~~Di~aA----~~aGi~~i~v~~g~-~~~~l~~~~a~--~vi~~~~e 230 (248)
T PLN02770 182 --DHTFVFEDSVSGIKAG----VAAGMPVVGLTTRN-PESLLMEAKPT--FLIKDYED 230 (248)
T ss_pred --hHEEEEcCCHHHHHHH----HHCCCEEEEEeCCC-CHHHHhhcCCC--EEeccchh
Confidence 4499999999999999 99999999999996 45556556666 55557777
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.84 E-value=1.6e-19 Score=154.82 Aligned_cols=123 Identities=13% Similarity=0.010 Sum_probs=98.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC-CeeEeCCCC----ChHH----HHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP-DRLYGLGTG----PKVN----VLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f-d~i~~~~~~----pKPe----~l~~l~~~~ 152 (218)
.....+|||+.++|+.| +.+++|+||+++..+..+++. +|+..+| |.|+|+++. |+|+ +++++++.
T Consensus 97 ~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~- 174 (267)
T PRK13478 97 ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVY- 174 (267)
T ss_pred hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCC-
Confidence 34578999999999988 469999999999999999999 9998875 899988653 6677 45555543
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC-----------------------HHHHHhhcCCCceEEec
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT-----------------------PKERAEAASMPRIQLLQ 209 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~-----------------------~~~l~~~~~~~~i~~~~ 209 (218)
++++|+||||+.+|+++| +++|+++|+|.||++. .+.+...+++.+ +.+
T Consensus 175 --~~~e~l~IGDs~~Di~aA----~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~v--i~~ 246 (267)
T PRK13478 175 --DVAACVKVDDTVPGIEEG----LNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYV--IDT 246 (267)
T ss_pred --CCcceEEEcCcHHHHHHH----HHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCee--hhh
Confidence 234599999999999999 9999999999999873 245666777744 458
Q ss_pred hhhHhhhc
Q 027798 210 LSDFCTKL 217 (218)
Q Consensus 210 l~el~~~~ 217 (218)
+.+|.+.+
T Consensus 247 ~~~l~~~l 254 (267)
T PRK13478 247 IADLPAVI 254 (267)
T ss_pred HHHHHHHH
Confidence 88887654
No 11
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.83 E-value=2.9e-19 Score=154.05 Aligned_cols=123 Identities=23% Similarity=0.280 Sum_probs=99.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
...+|||+.++|+.| +.+++|+||++...+...+++ +|+..+|+.+++++.. |+|+++..+..+.+.+|++|
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~ 177 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQS 177 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHE
Confidence 457999999999988 469999999999999999999 9999999999998643 66763333333333345559
Q ss_pred EEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+||||+.+|+++| +++||++++|.||+.....+...+++. .+.++.+|.+.
T Consensus 178 l~IGD~~~Di~aA----~~aGi~~i~v~~G~~~~~~l~~~~~~~--vi~~l~el~~~ 228 (272)
T PRK13223 178 LFVGDSRSDVLAA----KAAGVQCVALSYGYNHGRPIAEESPAL--VIDDLRALLPG 228 (272)
T ss_pred EEECCCHHHHHHH----HHCCCeEEEEecCCCCchhhhhcCCCE--EECCHHHHHHH
Confidence 9999999999999 999999999999998777766666664 45599988754
No 12
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.81 E-value=2.1e-18 Score=143.19 Aligned_cols=146 Identities=22% Similarity=0.283 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 61 NREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
+.++.......+.+.|.. .......++||+.++|+.+ +++++|+||+....+...+++ +|+..+|+.+++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~ 143 (226)
T PRK13222 69 DEELLEKLRELFDRHYAE----NVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGGD 143 (226)
T ss_pred cHHHHHHHHHHHHHHHHH----hccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccEEEcCC
Confidence 344444445554444422 1123467999999999988 468999999999999999999 99999999999886
Q ss_pred CC----ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 138 TG----PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 138 ~~----pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.. |+|+++..+....+.++++|+||||+.+|+++| +++|+++++|.||+....++....|+ +.+.++.+|
T Consensus 144 ~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a----~~~g~~~i~v~~g~~~~~~~~~~~~~--~~i~~~~~l 217 (226)
T PRK13222 144 SLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAA----RAAGCPSVGVTYGYNYGEPIALSEPD--VVIDHFAEL 217 (226)
T ss_pred CCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHH----HHCCCcEEEECcCCCCccchhhcCCC--EEECCHHHH
Confidence 43 777744444444444556699999999999999 99999999999998866555545555 666799999
Q ss_pred hhhc
Q 027798 214 CTKL 217 (218)
Q Consensus 214 ~~~~ 217 (218)
.+.|
T Consensus 218 ~~~l 221 (226)
T PRK13222 218 LPLL 221 (226)
T ss_pred HHHH
Confidence 8765
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.80 E-value=2.3e-18 Score=147.74 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=94.7
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...+|||+.++|+.| +.+++|+||+++..++..+++ +|+..||+.|+++++. |+|+ +++++++++++
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~- 184 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPER- 184 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHH-
Confidence 467999999999988 469999999999999999999 9999999999998753 6666 56666655554
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+|||||..|+++| +++||++|+|. |+.....+. .++ +.+.++.+|..
T Consensus 185 ---~l~IgDs~~Di~aA----~~aG~~~i~v~-g~~~~~~l~--~ad--~vi~~~~el~~ 232 (260)
T PLN03243 185 ---CIVFGNSNSSVEAA----HDGCMKCVAVA-GKHPVYELS--AGD--LVVRRLDDLSV 232 (260)
T ss_pred ---eEEEcCCHHHHHHH----HHcCCEEEEEe-cCCchhhhc--cCC--EEeCCHHHHHH
Confidence 99999999999999 99999999996 776665442 344 55668888754
No 14
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.79 E-value=1.9e-18 Score=143.68 Aligned_cols=123 Identities=10% Similarity=0.066 Sum_probs=92.5
Q ss_pred hcCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCC-eeEeCC-CC---ChHHHHHHhhhcCCCCCCceE
Q 027798 86 GANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG-TG---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-~i~~~~-~~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
....++||+.++|+.|+.+++|+||+++..++..|++ +|+..+|+ .|++++ .+ |+|+++.....+.+.+|++|+
T Consensus 85 ~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 85 SELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred ccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 4578999999999999999999999999999999999 99999996 577764 33 677733333333333455599
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||||+..|+++| +++|++++++.++..... . ..++. ..+.++.||.+.+
T Consensus 164 ~igDs~~di~aA----~~aG~~~i~~~~~~~~~~-~-~~~~~--~~~~~~~~l~~~~ 212 (221)
T PRK10563 164 LVDDSSAGAQSG----IAAGMEVFYFCADPHNKP-I-DHPLV--TTFTDLAQLPELW 212 (221)
T ss_pred EEeCcHhhHHHH----HHCCCEEEEECCCCCCcc-h-hhhhh--HHHHHHHHHHHHH
Confidence 999999999999 999999999876544322 1 12333 2346888877653
No 15
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.77 E-value=1.1e-17 Score=138.77 Aligned_cols=116 Identities=24% Similarity=0.234 Sum_probs=92.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| |.+++|+||++...+...+++ +|+..+||.|++++.. |+|+ ++++++..
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~---- 166 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK---- 166 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC----
Confidence 468999999999988 468999999999999999999 9999999999987643 6666 55555554
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHH-HhhcCCCceEEechhhH
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKER-AEAASMPRIQLLQLSDF 213 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l-~~~~~~~~i~~~~l~el 213 (218)
|++|+||||+. +|+++| +++|+++|++.+|+....+. ....++ +.+.++.||
T Consensus 167 ~~~~~~igDs~~~di~~A----~~aG~~~i~~~~~~~~~~~~~~~~~~~--~~i~~~~el 220 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGA----KNLGMKTVWINQGKSSKMEDDVYPYPD--YEISSLREL 220 (221)
T ss_pred hhhEEEECCChHHHHHHH----HHCCCEEEEECCCCCcccccccccCCC--eeeCcHHhh
Confidence 44599999998 899999 99999999999987644221 123344 566688776
No 16
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.77 E-value=1.1e-17 Score=149.97 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=93.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +++++|+||+++..++..|++ +||..||+.|+++++. |+|+ ++++++..|++
T Consensus 213 ~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 213 GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 3467999999999988 469999999999999999999 9999999999998754 6776 55566655554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+||||+..|+++| +++||++|+|.|++. ..++ ..++ +.+.++.||
T Consensus 292 ----cl~IGDS~~DIeAA----k~AGm~~IgV~~~~~-~~~l--~~Ad--~iI~s~~EL 337 (381)
T PLN02575 292 ----CIVFGNSNQTVEAA----HDARMKCVAVASKHP-IYEL--GAAD--LVVRRLDEL 337 (381)
T ss_pred ----EEEEcCCHHHHHHH----HHcCCEEEEECCCCC-hhHh--cCCC--EEECCHHHH
Confidence 99999999999999 999999999998753 3332 2344 456688887
No 17
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.76 E-value=1.1e-17 Score=139.25 Aligned_cols=122 Identities=19% Similarity=0.171 Sum_probs=96.2
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e 158 (218)
....+|||+.++|+.| |.+++|+||++...++..+++ +|+..+|+.+++++.. |+|+++..+....+.+|++
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLT 167 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 4568999999999988 469999999999999999999 9999999999998653 7777333333333334555
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
|+||||+.+|+++| +++|++++++.++....+.. ...++ ..+.++.||.+
T Consensus 168 ~~~igDs~~Di~aA----~~aG~~~i~v~~~~~~~~~~-~~~~~--~~~~~~~dl~~ 217 (222)
T PRK10826 168 CVALEDSFNGMIAA----KAARMRSIVVPAPEQQNDPR-WALAD--VKLESLTELTA 217 (222)
T ss_pred eEEEcCChhhHHHH----HHcCCEEEEecCCccCchhh-hhhhh--eeccCHHHHhh
Confidence 99999999999999 99999999999886554322 22344 56679998865
No 18
>PRK09449 dUMP phosphatase; Provisional
Probab=99.76 E-value=7.4e-18 Score=140.24 Aligned_cols=122 Identities=20% Similarity=0.184 Sum_probs=95.6
Q ss_pred hhhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 84 WIGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
+.....+|||+.++|+.|+ .+++|+||++...++..|++ +|+..+||.|++++.. |+|+ ++++++..+
T Consensus 90 ~~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~- 167 (224)
T PRK09449 90 MAEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPD- 167 (224)
T ss_pred HhhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCC-
Confidence 3445679999999999984 69999999999999999999 9999999999988653 6666 555555432
Q ss_pred CCCCceEEEcCch-hhHHhccccccccCccEEEEeCC-CCCHHHHHhhcCCCceEEechhhHhhhcC
Q 027798 154 HQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 154 ~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G-~~~~~~l~~~~~~~~i~~~~l~el~~~~~ 218 (218)
+++|+||||+. +|+++| +++||+++++.++ .... ....+ .+.+.++.||.+.+|
T Consensus 168 --~~~~~~vgD~~~~Di~~A----~~aG~~~i~~~~~~~~~~---~~~~~--~~~i~~~~el~~~l~ 223 (224)
T PRK09449 168 --RSRVLMVGDNLHSDILGG----INAGIDTCWLNAHGREQP---EGIAP--TYQVSSLSELEQLLC 223 (224)
T ss_pred --cccEEEEcCCcHHHHHHH----HHCCCcEEEECCCCCCCC---CCCCC--eEEECCHHHHHHHHh
Confidence 34599999998 699999 9999999999854 3221 12234 466779999988765
No 19
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.75 E-value=2.7e-17 Score=151.33 Aligned_cols=120 Identities=17% Similarity=0.258 Sum_probs=99.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHHHHHHhhhcCCCCCCceE
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
...+|||+.++|+.| +++++|+||+++..++..+++ +|+..||+.++++++. |||+.+.....+ .+|++|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~--l~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNK--YDIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHh--cCcceEE
Confidence 468999999999988 469999999999999999999 9999999999998753 899844443322 2456699
Q ss_pred EEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||||+.+|+++| +++||.++++.||+...+++ ..++ +.+.++.||.+++
T Consensus 405 ~VGDs~~Di~aA----k~AG~~~I~v~~~~~~~~~~--~~~d--~~i~~l~el~~~l 453 (459)
T PRK06698 405 VVGDRLSDINAA----KDNGLIAIGCNFDFAQEDEL--AQAD--IVIDDLLELKGIL 453 (459)
T ss_pred EEeCCHHHHHHH----HHCCCeEEEEeCCCCccccc--CCCC--EEeCCHHHHHHHH
Confidence 999999999999 99999999999998765543 2444 6677999987765
No 20
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.75 E-value=2.2e-17 Score=139.43 Aligned_cols=149 Identities=12% Similarity=0.098 Sum_probs=101.0
Q ss_pred hHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 50 IKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
....++..+|++.+............ +..|.....+|||+.++|+.|+ .+++|+||++.. +++ +|+.
T Consensus 79 ~l~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~ 147 (238)
T PRK10748 79 AIEQAMLDAGLSAEEASAGADAAMIN-----FAKWRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLG 147 (238)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHH-----HHHHhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcH
Confidence 44445666676543322222222221 2233445789999999999994 589999998865 477 9999
Q ss_pred CCCCeeEeCCCC----ChHH----HHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHh
Q 027798 128 ITPDRLYGLGTG----PKVN----VLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAE 198 (218)
Q Consensus 128 ~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~ 198 (218)
.+||.|++++.. |+|+ +++++++.+ ++|+||||+ ..|+++| +++||+++++..+.........
T Consensus 148 ~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~----~~~~~VGD~~~~Di~~A----~~aG~~~i~v~~~~~~~~~~~~ 219 (238)
T PRK10748 148 DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPI----GEILHVGDDLTTDVAGA----IRCGMQACWINPENGDLMQTWD 219 (238)
T ss_pred HhhceeEecccCCcCCCcHHHHHHHHHHcCCCh----hHEEEEcCCcHHHHHHH----HHCCCeEEEEcCCCcccccccc
Confidence 999999988643 6776 445555544 449999999 5999999 9999999999875432111111
Q ss_pred hcCCCceEEechhhHhhhc
Q 027798 199 AASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 199 ~~~~~~i~~~~l~el~~~~ 217 (218)
....+...+.+|.||.++|
T Consensus 220 ~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 220 SRLLPHIEISRLASLTSLI 238 (238)
T ss_pred ccCCCCEEECCHHHHHhhC
Confidence 1122446778999998764
No 21
>PRK11587 putative phosphatase; Provisional
Probab=99.75 E-value=3.5e-17 Score=136.14 Aligned_cols=114 Identities=20% Similarity=0.174 Sum_probs=89.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| +.+++|+||++...+...++. .|+ .+|+.+++++.. |+|+ +++++++.|++
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 4568999999999988 469999999999888888988 898 467888887543 6666 55566665555
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|||||..|+++| ++||+++++|.||+... . ...++ +.+.++.||.
T Consensus 158 ----~l~igDs~~di~aA----~~aG~~~i~v~~~~~~~-~--~~~~~--~~~~~~~el~ 204 (218)
T PRK11587 158 ----CVVVEDAPAGVLSG----LAAGCHVIAVNAPADTP-R--LDEVD--LVLHSLEQLT 204 (218)
T ss_pred ----EEEEecchhhhHHH----HHCCCEEEEECCCCchh-h--hccCC--EEecchhhee
Confidence 99999999999999 99999999999986432 2 23444 5666888763
No 22
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.75 E-value=3.6e-17 Score=137.16 Aligned_cols=120 Identities=17% Similarity=0.086 Sum_probs=92.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....+|||+.++|+.| |.+++|+||+++..++..+++ +|+..+|+.|++++.. |+|+ ++++++++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~--- 165 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK--- 165 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC---
Confidence 4468999999999988 459999999999999999999 9999999999988643 6666 45555554
Q ss_pred CCCceEEEcCchhhHHhccccccccCcc-EEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWN-LYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~-~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|+||||+..|+++| +++||+ +++|.+|.+..++. ...+. ..+.++.++.+.|
T Consensus 166 -p~~~l~igDs~~di~aA----~~aG~~~~~~v~~~~~~~~~~-~~~~~--~~~~~~~~~~~~l 221 (224)
T PRK14988 166 -AERTLFIDDSEPILDAA----AQFGIRYCLGVTNPDSGIAEK-QYQRH--PSLNDYRRLIPSL 221 (224)
T ss_pred -hHHEEEEcCCHHHHHHH----HHcCCeEEEEEeCCCCCccch-hccCC--CcHHHHHHHhhhh
Confidence 45599999999999999 999998 57898887654332 12222 3444666665543
No 23
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.74 E-value=2.6e-17 Score=136.26 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=96.0
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHh-hhcCCC
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQL-QKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l-~~~~~~ 154 (218)
....++||+.++|+.|+ .+++|+||++...+...+++ +|+..+||.|++++.. |+|+ +++++ +.+
T Consensus 94 ~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~--- 169 (224)
T TIGR02254 94 EGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS--- 169 (224)
T ss_pred ccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC---
Confidence 34689999999999885 58999999999999999999 9999999999998643 6666 45555 544
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|++|+||||+. +|+++| +++||+++++.||..... ...++ ...+.++.||.++|
T Consensus 170 -~~~~v~igD~~~~di~~A----~~~G~~~i~~~~~~~~~~--~~~~~--~~~~~~~~el~~~~ 224 (224)
T TIGR02254 170 -KEEVLMIGDSLTADIKGG----QNAGLDTCWMNPDMHPNP--DDIIP--TYEIRSLEELYEIL 224 (224)
T ss_pred -chheEEECCCcHHHHHHH----HHCCCcEEEECCCCCCCC--CCCCC--ceEECCHHHHHhhC
Confidence 45599999998 799999 999999999999865431 22334 46667999998764
No 24
>PLN02940 riboflavin kinase
Probab=99.73 E-value=6.1e-17 Score=145.91 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=94.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHH-HhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLR-ELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~-~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| +.+++|+||+++..++..++ + +|+..+||.|+++++. |+|+ ++++++++++
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 3568999999999988 46999999999999998887 7 8999999999998753 6666 5666666555
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
+ |+||||+..|+++| +++||++++|.||+.... ...+++ ..+.++.||.
T Consensus 169 ~----~l~VGDs~~Di~aA----~~aGi~~I~v~~g~~~~~--~~~~ad--~~i~sl~el~ 217 (382)
T PLN02940 169 N----CLVIEDSLPGVMAG----KAAGMEVIAVPSIPKQTH--LYSSAD--EVINSLLDLQ 217 (382)
T ss_pred H----EEEEeCCHHHHHHH----HHcCCEEEEECCCCcchh--hccCcc--EEeCCHhHcC
Confidence 4 99999999999999 999999999999876443 223444 5666888874
No 25
>PLN02811 hydrolase
Probab=99.73 E-value=3.7e-17 Score=136.28 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=88.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHH-HHHHhcCCCCCCCeeEeCC--CC----ChHH----HHHHhhhc
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVET-LLRELAGVTITPDRLYGLG--TG----PKVN----VLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~-~L~~~~gl~~~fd~i~~~~--~~----pKPe----~l~~l~~~ 151 (218)
....+|||+.++|+.| +.+++|+||+++..... .++. .++..+|+.+++++ .. |+|+ ++++++ .
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~-~ 152 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFE-D 152 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhC-C
Confidence 4568999999999988 46999999999865544 4444 57889999999987 43 6666 555554 1
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
...+|++|+||||+..|+++| +++||++|+|.||+.+...+ .+++. .+.++.|+
T Consensus 153 ~~~~~~~~v~IgDs~~di~aA----~~aG~~~i~v~~~~~~~~~~--~~~d~--vi~~~~e~ 206 (220)
T PLN02811 153 GPVDPGKVLVFEDAPSGVEAA----KNAGMSVVMVPDPRLDKSYC--KGADQ--VLSSLLDF 206 (220)
T ss_pred CCCCccceEEEeccHhhHHHH----HHCCCeEEEEeCCCCcHhhh--hchhh--HhcCHhhC
Confidence 123455599999999999999 99999999999998765433 35553 44477765
No 26
>PRK06769 hypothetical protein; Validated
Probab=99.73 E-value=9.1e-18 Score=135.62 Aligned_cols=124 Identities=15% Similarity=0.038 Sum_probs=87.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH--------HHHHHHHHhcCCCCCCCeeE-eCCC-C---ChHHHHHHhhh
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR--------FVETLLRELAGVTITPDRLY-GLGT-G---PKVNVLKQLQK 150 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~--------~~~~~L~~~~gl~~~fd~i~-~~~~-~---pKPe~l~~l~~ 150 (218)
...+|||+.++|+.| +.+++|+||++.. .....++. +|+..+|..+. +++. . |+|+++.+...
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 457999999999998 4699999999852 23445777 78766554333 3332 2 77774444333
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH------HHHHhhcCCCceEEechhhHhhhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP------KERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~------~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+...+|++|+||||+..|+++| +++|+++|+|.||++.. +++....++ ..+.++.||.+.|
T Consensus 105 ~l~~~p~~~i~IGD~~~Di~aA----~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~--~~~~~~~el~~~l 171 (173)
T PRK06769 105 KHGLDLTQCAVIGDRWTDIVAA----AKVNATTILVRTGAGYDALHTYRDKWAHIEPN--YIAENFEDAVNWI 171 (173)
T ss_pred HcCCCHHHeEEEcCCHHHHHHH----HHCCCeEEEEecCCCchhhhhhhcccccCCCc--chhhCHHHHHHHH
Confidence 3334555599999999999999 99999999999998653 233344555 4445888887754
No 27
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.72 E-value=8e-17 Score=131.70 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=106.6
Q ss_pred CCCHHHHHHhHHHhHHHHH-HhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcC--CCEEEEeCCch
Q 027798 37 GLTVEGILENWLKIKPVIM-EEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLAS--SRIYIVTSNQS 113 (218)
Q Consensus 37 ~~s~~~i~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~ 113 (218)
|.+.+++....+......+ ..++.+.++..+.+..+++ ..+.....+|||+.++|+.|+ .+++++||++.
T Consensus 28 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~ 100 (197)
T PHA02597 28 NIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNN-------SDFIRYLSAYDDALDVINKLKEDYDFVAVTALGD 100 (197)
T ss_pred CCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhH-------HHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCcc
Confidence 5566666655554322222 2233333333334333331 123345679999999999994 47889999887
Q ss_pred HHHHHHHHHhcCCCC----CCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc--CccEEEE
Q 027798 114 RFVETLLRELAGVTI----TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD--GWNLYLV 186 (218)
Q Consensus 114 ~~~~~~L~~~~gl~~----~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a--Gi~~i~v 186 (218)
......++. +++.. +|+.+++++.. |||+.+.....+.+ |++|+||||+..|+++| ++| ||+++++
T Consensus 101 ~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA----~~a~~Gi~~i~~ 173 (197)
T PHA02597 101 SIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAA----HEALSQLPVIHM 173 (197)
T ss_pred chhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHH----HHHHcCCcEEEe
Confidence 777667777 77764 56778887666 89993333222222 44599999999999999 999 9999999
Q ss_pred eCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 187 DWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 187 ~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
.||+. ...|.+.+.+.++.|+..
T Consensus 174 ~~~~~------~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 174 LRGER------DHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred cchhh------ccccchhhhhccHHHHhc
Confidence 99964 234556677789988864
No 28
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.70 E-value=2.4e-16 Score=128.83 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=81.4
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~ 155 (218)
...++||+.++|+.| |.+++|+||++...+...+++ +|+..+||.|++++.. |+|+ ++++++.+|++
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~- 167 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE- 167 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh-
Confidence 457999999999988 468999999999999999999 9999999999998753 5565 55666665555
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+||||+.+|+++| +++||++|+|..+
T Consensus 168 ---~~~vgD~~~Di~~A----~~~G~~~i~v~r~ 194 (198)
T TIGR01428 168 ---VLFVASNPWDLGGA----KKFGFKTAWVNRP 194 (198)
T ss_pred ---EEEEeCCHHHHHHH----HHCCCcEEEecCC
Confidence 99999999999999 9999999999764
No 29
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.69 E-value=3.5e-16 Score=125.96 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=74.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.| +.+++|+||+.. ....|++ +|+..+|+.+++++.. |+|+++.....+.+.+|++|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 47999999999988 469999999754 4578999 9999999999987643 777744333333334555699
Q ss_pred EEcCchhhHHhccccccccCccEEEEe
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||+.+|+++| +++||++|+|+
T Consensus 163 ~vgD~~~di~aA----~~aG~~~i~v~ 185 (185)
T TIGR01990 163 GIEDAQAGIEAI----KAAGMFAVGVG 185 (185)
T ss_pred EEecCHHHHHHH----HHcCCEEEecC
Confidence 999999999999 99999999874
No 30
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.69 E-value=6.4e-17 Score=130.90 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=87.6
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCC-chHHHHHHHHHhcCCC---------CCCCeeEeCCCC--ChHH--HHHHh
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSN-QSRFVETLLRELAGVT---------ITPDRLYGLGTG--PKVN--VLKQL 148 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~-~~~~~~~~L~~~~gl~---------~~fd~i~~~~~~--pKPe--~l~~l 148 (218)
....+|||+.++|+.| |.+++|+||+ ....++..|+. +|+. .+|+.+++++.. +||. +++.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 3568999999999998 3699999999 88999999999 9998 999999998754 5544 66666
Q ss_pred hhcC--CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 149 QKKP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 149 ~~~~--~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
+... ..+|++|+||||+..|+++| +++|+++++|.||+...+.
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~aA----~~aGi~~i~v~~g~~~~~~ 165 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVREV----WGYGVTSCYCPSGMDKGTF 165 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHHH----HHhCCEEEEcCCCccHHHH
Confidence 5332 35666699999999999999 9999999999999875543
No 31
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.69 E-value=2.5e-16 Score=136.82 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=87.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC---CCCCeeEeCCC-C---ChHH----HHHHhhhcCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT---ITPDRLYGLGT-G---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~---~~fd~i~~~~~-~---pKPe----~l~~l~~~~~ 153 (218)
..++||+.++|+.| |++++|+||++...+..+++. ++.. .+|+.+ ++++ . |+|+ ++++++.+|
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p- 219 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDP- 219 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcCh-
Confidence 47999999999987 569999999999999999998 6433 344544 5543 2 6666 555666554
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
++|+||||+.+|+++| +++||++|+|.||+..++++ .+++ +.+.++.++.
T Consensus 220 ---~~~l~IGDs~~Di~aA----~~aG~~~i~v~~g~~~~~~l--~~ad--~vi~~~~~l~ 269 (286)
T PLN02779 220 ---SRCVVVEDSVIGLQAA----KAAGMRCIVTKSSYTADEDF--SGAD--AVFDCLGDVP 269 (286)
T ss_pred ---HHEEEEeCCHHhHHHH----HHcCCEEEEEccCCcccccc--CCCc--EEECChhhcc
Confidence 4599999999999999 99999999999998876655 2444 5666887763
No 32
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.68 E-value=1.9e-16 Score=128.19 Aligned_cols=91 Identities=21% Similarity=0.288 Sum_probs=79.0
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------ChHH----HHHHhhhcCCC
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------pKPe----~l~~l~~~~~~ 154 (218)
...++||+.++|+.|+.+++|+||+++..+...+++ +|+..+||.|++++.. |+|+ ++++++.+|+
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~- 159 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE- 159 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc-
Confidence 457999999999999999999999999999999999 9999999999988642 4555 5556665554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+|+||||+..|+++| +++|+++++|
T Consensus 160 ---~~l~vgD~~~di~aA----~~~G~~~i~v 184 (184)
T TIGR01993 160 ---RAIFFDDSARNIAAA----KALGMKTVLV 184 (184)
T ss_pred ---ceEEEeCCHHHHHHH----HHcCCEEeeC
Confidence 499999999999999 9999999875
No 33
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.68 E-value=4.8e-16 Score=125.17 Aligned_cols=93 Identities=17% Similarity=0.161 Sum_probs=76.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
...++||+.++|+.| +.+++|+||+ ..++..|++ +|+..+|+.+++++.. |+|+++.....+.+.+|++|
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 162 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNEC 162 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHe
Confidence 468999999999988 4699999998 668899999 9999999999998643 66664444333334455669
Q ss_pred EEEcCchhhHHhccccccccCccEEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+||||+..|+++| +++|+++++|
T Consensus 163 v~IgD~~~di~aA----~~~G~~~i~v 185 (185)
T TIGR02009 163 VVFEDALAGVQAA----RAAGMFAVAV 185 (185)
T ss_pred EEEeCcHhhHHHH----HHCCCeEeeC
Confidence 9999999999999 9999999876
No 34
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.68 E-value=2e-16 Score=127.77 Aligned_cols=119 Identities=24% Similarity=0.209 Sum_probs=85.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeC-----------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL----------- 136 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~----------- 136 (218)
....+|||+.++|+.| |.+++|+||++. ......+.+ +++. |+.++.+
T Consensus 23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~ 99 (176)
T TIGR00213 23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFR 99 (176)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCccccccc
Confidence 3457999999999998 469999999995 455567777 7776 7776532
Q ss_pred -CC--C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE-EEEeCCCCCHHHHHhhcCCCceEEechh
Q 027798 137 -GT--G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL-YLVDWGYNTPKERAEAASMPRIQLLQLS 211 (218)
Q Consensus 137 -~~--~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~-i~v~~G~~~~~~l~~~~~~~~i~~~~l~ 211 (218)
+. . |+|+++.....+.+.++++|+||||+.+|+++| +++|+++ ++|.||+.... ....+++ +.+.++.
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA----~~aG~~~~i~v~~g~~~~~-~~~~~ad--~~i~~~~ 172 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG----VAAKVKTNVLVRTGKPITP-EAENIAD--WVLNSLA 172 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH----HHCCCcEEEEEecCCcccc-cccccCC--EEeccHH
Confidence 11 1 777744333333334455599999999999999 9999998 89999976432 2224455 5555888
Q ss_pred hHh
Q 027798 212 DFC 214 (218)
Q Consensus 212 el~ 214 (218)
||.
T Consensus 173 el~ 175 (176)
T TIGR00213 173 DLP 175 (176)
T ss_pred Hhh
Confidence 875
No 35
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.68 E-value=8.5e-16 Score=124.29 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=78.6
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~ 159 (218)
....++|| .++|+.|+ .+++|+||+++..++..|++ +|+..|||.|+++++. |+|+++.....+.+.+|++|
T Consensus 85 ~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 44578896 58888884 59999999999999999999 9999999999998753 77774444333333345559
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
+||||+.+|+++| +++|+++|+|.
T Consensus 163 l~igDs~~di~aA----~~aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAA----RAAGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHH----HHCCCEEEeec
Confidence 9999999999999 99999999985
No 36
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.67 E-value=2.6e-16 Score=123.91 Aligned_cols=92 Identities=23% Similarity=0.337 Sum_probs=79.1
Q ss_pred hcCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCC
Q 027798 86 GANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEH 154 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~ 154 (218)
....++||+.++|+.|+ .+++|+||++...+...+++ +|+..+|+.++++++. |+|+ ++++++++|+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~- 151 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPE- 151 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGG-
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcc-
Confidence 45689999999999884 69999999999999999999 9999999999988643 5555 5555555554
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+|+||||+..|+++| +++||++|+|
T Consensus 152 ---~~~~vgD~~~d~~~A----~~~G~~~i~v 176 (176)
T PF13419_consen 152 ---EILFVGDSPSDVEAA----KEAGIKTIWV 176 (176)
T ss_dssp ---GEEEEESSHHHHHHH----HHTTSEEEEE
T ss_pred ---eEEEEeCCHHHHHHH----HHcCCeEEeC
Confidence 499999999999999 9999999986
No 37
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.66 E-value=5.9e-16 Score=125.45 Aligned_cols=120 Identities=23% Similarity=0.212 Sum_probs=87.9
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeC-----CC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGL-----GT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~-----~~-~-- 139 (218)
....+|||+.++|+.| +.+++|+||++. +.+...+++ +|+ +|+.++.+ +. .
T Consensus 26 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~ 102 (181)
T PRK08942 26 DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCR 102 (181)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCC
Confidence 3457999999999998 469999999973 345566777 777 57777643 21 2
Q ss_pred -ChHH----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 -PKVN----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 -pKPe----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|+ ++++++.+ |++|+||||+.+|+.+| +++|+.++++.||+.... +....+...+.+.++.++.
T Consensus 103 KP~p~~~~~~~~~l~~~----~~~~~~VgDs~~Di~~A----~~aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~ 173 (181)
T PRK08942 103 KPKPGMLLSIAERLNID----LAGSPMVGDSLRDLQAA----AAAGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLP 173 (181)
T ss_pred CCCHHHHHHHHHHcCCC----hhhEEEEeCCHHHHHHH----HHCCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHH
Confidence 6676 55555554 45599999999999999 999999999999987443 3333441135667999988
Q ss_pred hhc
Q 027798 215 TKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
+.+
T Consensus 174 ~~l 176 (181)
T PRK08942 174 QAL 176 (181)
T ss_pred HHH
Confidence 765
No 38
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.66 E-value=6.1e-16 Score=129.60 Aligned_cols=121 Identities=21% Similarity=0.244 Sum_probs=95.9
Q ss_pred hhcCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCC
Q 027798 85 IGANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPE 153 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~ 153 (218)
.....++||+.++|+.|+ ++++++||+++..+...|+. +|+.+||+.++++++. |.|| ++++|++.|+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 355689999999999996 79999999999999999999 9999999998887644 6666 7788887777
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH--HHHHhhcCCCceEEechhhHhhh
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP--KERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~--~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+ |++|+||.++++|| ++|||.++++..++... ..+.....+ ..+.++.++...
T Consensus 161 ~----CvviEDs~~Gi~Aa----~aAGm~vv~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~ 215 (221)
T COG0637 161 E----CVVVEDSPAGIQAA----KAAGMRVVGVPAGHDRPHLDPLDAHGAD--TVLLDLAELPAL 215 (221)
T ss_pred H----eEEEecchhHHHHH----HHCCCEEEEecCCCCccccchhhhhhcc--hhhccHHHHHHH
Confidence 7 99999999999999 99999999998765532 222222333 334466666543
No 39
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.64 E-value=5.2e-15 Score=147.86 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=95.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC-CCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-ITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
.+|||+.++|+.| +.+++|+||+.+..++..|++ +|+. .+||.+++++.. |+|+ +++++++.|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~--- 236 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTS--- 236 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcc---
Confidence 4899999999998 469999999999999999999 9996 899999998754 6676 5555665554
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
+|+||||+..|+++| +++||++|+|.||+ +.+++...+++ +.+.++.++
T Consensus 237 -e~v~IgDs~~Di~AA----~~aGm~~I~v~~~~-~~~~L~~~~a~--~vi~~l~el 285 (1057)
T PLN02919 237 -ECVVIEDALAGVQAA----RAAGMRCIAVTTTL-SEEILKDAGPS--LIRKDIGNI 285 (1057)
T ss_pred -cEEEEcCCHHHHHHH----HHcCCEEEEECCCC-CHHHHhhCCCC--EEECChHHC
Confidence 499999999999999 99999999999997 56777777776 455577776
No 40
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.64 E-value=6.2e-16 Score=128.37 Aligned_cols=119 Identities=23% Similarity=0.266 Sum_probs=95.7
Q ss_pred cCCCcccHHHHHHhcCCC--EEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHH------HHHHhhhcCCCCC
Q 027798 87 ANRLYPGVSDALKLASSR--IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~--l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe------~l~~l~~~~~~~~ 156 (218)
..+++|++.+.|+.++.+ ++|+||+........|++ +||.++||.|++++.. .||+ ++++++++|++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~-- 173 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEE-- 173 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcce--
Confidence 468999999999999765 999999999999999999 9999999999988654 5665 66777766555
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+.+| +++||++|++..+.... ......+.+.+.++.++...+
T Consensus 174 --~l~VgD~~~~di~gA----~~~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 174 --ALFVGDSLENDILGA----RALGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred --EEEECCChhhhhHHH----HhcCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 99999997 577999 99999999997664432 111234557777999988765
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.63 E-value=2.6e-15 Score=123.27 Aligned_cols=102 Identities=18% Similarity=0.176 Sum_probs=82.2
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| |.+++|+||++.......+....++..+||.|++++.. |+|+ ++++++++|++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~-- 160 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAAD-- 160 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhH--
Confidence 36899999999988 46999999999888777665524788999999988643 6676 55666655555
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHH
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERA 197 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~ 197 (218)
|+||||+..|+++| +++||+++++.++..-++.++
T Consensus 161 --~l~vgD~~~di~aA----~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 161 --AVFFDDNADNIEAA----NALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred --eEEeCCCHHHHHHH----HHcCCEEEEecCCccHHHHHH
Confidence 99999999999999 999999999988766555443
No 42
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.61 E-value=2.9e-15 Score=122.83 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=72.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----ChHH----HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----PKVN----VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe----~l~~l~~~~~~~~ 156 (218)
..++||+.++|+.| +.+++|+||++.. +...+++ +|+..+||.|++++.. |+|+ ++++++.+|
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~---- 177 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISP---- 177 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCh----
Confidence 47999999999988 3699999999875 4788999 9999999999988643 5666 555565544
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEE
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~ 185 (218)
++|+||||+. +|+++| +++||++|+
T Consensus 178 ~~~~~IgD~~~~Di~~A----~~aG~~~i~ 203 (203)
T TIGR02252 178 EEALHIGDSLRNDYQGA----RAAGWRALL 203 (203)
T ss_pred hHEEEECCCchHHHHHH----HHcCCeeeC
Confidence 4599999997 899999 999999874
No 43
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.59 E-value=3.1e-15 Score=119.66 Aligned_cols=99 Identities=21% Similarity=0.183 Sum_probs=78.7
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCc---------------hHHHHHHHHHhcCCCCCCCee-Ee----CCC-C--
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQ---------------SRFVETLLRELAGVTITPDRL-YG----LGT-G-- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~---------------~~~~~~~L~~~~gl~~~fd~i-~~----~~~-~-- 139 (218)
....+|||+.++|+.| +.+++|+||++ ...+..++++ +|+. |+.+ +| ++. .
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~~ 102 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDCR 102 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCCC
Confidence 4468999999999998 46999999984 5678889999 9996 7655 55 333 2
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
|+|+++..+......++++|+||||+.+|+++| +++||+++++.+|--
T Consensus 103 KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A----~~aGi~~i~~~~~~~ 151 (161)
T TIGR01261 103 KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLA----ENLGIRGIQYDEEEL 151 (161)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH----HHCCCeEEEEChhhc
Confidence 777765555555555667799999999999999 999999999987643
No 44
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.58 E-value=1.3e-14 Score=116.15 Aligned_cols=93 Identities=23% Similarity=0.285 Sum_probs=74.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHHHHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+.| +.+++|+||++... ...+.+ +|+..+|+.|++++. + |+|++...+..+.+.+|++|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 68999999999988 46899999999988 778888 899999999988753 3 556643333333333455599
Q ss_pred EEcCchhhHHhccccccccCccEEEE
Q 027798 161 FVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 161 ~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
||||+..|+++| +++|+.+|+|
T Consensus 162 ~vgD~~~di~aA----~~~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAA----KAAGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHH----HHcCCEEEeC
Confidence 999999999999 9999999875
No 45
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.57 E-value=3.6e-15 Score=123.05 Aligned_cols=101 Identities=21% Similarity=0.191 Sum_probs=78.3
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHH--HHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRF--VETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPE 153 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~--~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~ 153 (218)
...+|||+.++|+.| |++++|+||++... ....+.. +++..+||.|++++. + |+|+ ++++++++|+
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 467999999999988 46999999987654 3344555 688899999998764 3 6666 5555665554
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
+|+||||+..|+++| +++||++|++.++....+++
T Consensus 171 ----~~l~i~D~~~di~aA----~~aG~~~i~v~~~~~~~~~l 205 (211)
T TIGR02247 171 ----ECVFLDDLGSNLKPA----AALGITTIKVSDEEQAIHDL 205 (211)
T ss_pred ----HeEEEcCCHHHHHHH----HHcCCEEEEECCHHHHHHHH
Confidence 499999999999999 99999999998765444444
No 46
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.57 E-value=2.1e-14 Score=120.40 Aligned_cols=97 Identities=20% Similarity=0.236 Sum_probs=80.0
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc---CCCCCCCeeEeCCCC--ChHH----HHHHhhhcCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA---GVTITPDRLYGLGTG--PKVN----VLKQLQKKPE 153 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~---gl~~~fd~i~~~~~~--pKPe----~l~~l~~~~~ 153 (218)
....+|||+.++|+.| |.+++|+||++....+..+++ + ++..+|+.++....+ |+|+ +++++++.|+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChh
Confidence 4567999999999998 469999999999998888887 6 577778777654333 6676 6677776665
Q ss_pred CCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 154 HQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
+ |+||||+..|+++| +++||+++++.++.+
T Consensus 171 e----~lfVgDs~~Di~AA----~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 171 E----ILFLSDIINELDAA----RKAGLHTGQLVRPGN 200 (220)
T ss_pred H----EEEEeCCHHHHHHH----HHcCCEEEEEECCCC
Confidence 5 99999999999999 999999999988754
No 47
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.56 E-value=1.5e-14 Score=122.39 Aligned_cols=100 Identities=8% Similarity=-0.003 Sum_probs=82.6
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCC----chHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcCCCC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSN----QSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQ 155 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~----~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~~~~ 155 (218)
.....+++++.++|+.+ |.+++|+||+ ....++.++++ +|+..+|+.+++++.. +||+....+ .+.+.
T Consensus 110 ~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~Kp~~~~~l-~~~~i- 186 (237)
T TIGR01672 110 DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQYTKTQWI-QDKNI- 186 (237)
T ss_pred ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCCCCHHHHH-HhCCC-
Confidence 34557888899999988 4699999998 66789999999 9999999999998764 666532222 23445
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHH
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPK 194 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~ 194 (218)
++||||+.+|+.+| ++||+++++|.||+++..
T Consensus 187 ---~i~vGDs~~DI~aA----k~AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 187 ---RIHYGDSDNDITAA----KEAGARGIRILRASNSTY 218 (237)
T ss_pred ---eEEEeCCHHHHHHH----HHCCCCEEEEEecCCCCC
Confidence 89999999999999 999999999999999753
No 48
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.52 E-value=2.4e-14 Score=112.44 Aligned_cols=98 Identities=26% Similarity=0.243 Sum_probs=71.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCC--CCeeEe-CCC-C---Ch
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTIT--PDRLYG-LGT-G---PK 141 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~--fd~i~~-~~~-~---pK 141 (218)
..++|||+.++|+.| +++++|+||+++ ..+...+++ +|+... |..+.+ ++. . |+
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPK 103 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCC
Confidence 347999999999988 469999999984 567778888 998622 111111 332 1 77
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+++..+....+.++++|+||||+..|+++| +++||+++++..|
T Consensus 104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A----~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 104 PGLILEALKRLGVDASRSLVVGDRLRDLQAA----RNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHH----HHCCCCEEEecCC
Confidence 7744443333334555599999999999999 9999999998754
No 49
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.50 E-value=1.4e-13 Score=116.60 Aligned_cols=96 Identities=13% Similarity=0.063 Sum_probs=79.1
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCC----chHHHHHHHHHhcCC--CCCCCeeEeCCCC---ChHHHHHHhhhcC
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSN----QSRFVETLLRELAGV--TITPDRLYGLGTG---PKVNVLKQLQKKP 152 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~----~~~~~~~~L~~~~gl--~~~fd~i~~~~~~---pKPe~l~~l~~~~ 152 (218)
.....|+||+.++|+.+ |.+++++||+ ....++.++++ +|+ ..+|+.+++.+.. .|.+.+++ .
T Consensus 110 ~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K~~K~~~l~~----~ 184 (237)
T PRK11009 110 DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQYTKTQWLKK----K 184 (237)
T ss_pred cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCCCCHHHHHHh----c
Confidence 44578999999999988 4699999995 45688888888 999 8999999987743 23334443 3
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCH
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
+. ++||||+.+|+++| ++||+++++|.||+++.
T Consensus 185 ~i----~I~IGDs~~Di~aA----~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 185 NI----RIFYGDSDNDITAA----REAGARGIRILRAANST 217 (237)
T ss_pred CC----eEEEcCCHHHHHHH----HHcCCcEEEEecCCCCC
Confidence 45 99999999999999 99999999999999864
No 50
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.49 E-value=5.3e-14 Score=122.19 Aligned_cols=95 Identities=19% Similarity=0.090 Sum_probs=80.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCC----------CC-ChHH----HHHHh
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLG----------TG-PKVN----VLKQL 148 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~----------~~-pKPe----~l~~l 148 (218)
..++||+.++|+.| |.+++|+||++....+..++. +|+.. +|+.++|.+ .. |+|+ +++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 46899999999988 569999999999999999999 99996 999999987 22 6666 55555
Q ss_pred hhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+.. ++++|+||||+.+|+++| +++||++++|.||-
T Consensus 265 ~~~---~~~~~~~vgD~~~d~~~a----~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAP---KYDVLLAVDDRDQVVDMW----RRIGLECWQVAPGD 299 (300)
T ss_pred hcc---CceEEEEEcCcHHHHHHH----HHhCCeEEEecCCC
Confidence 541 234499999999999999 99999999999983
No 51
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.47 E-value=1.2e-13 Score=111.32 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=75.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc-hHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ-SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~-~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+|||+.++|+.| +.+++|+||++ ...+..+++. +|+..++ ....|+|+++..+..+.+.++++|+|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 47999999999988 46999999999 6777777788 8875332 1123888844444333344556699999
Q ss_pred Cch-hhHHhccccccccCccEEEEeCCCCCHHHH
Q 027798 164 DRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKER 196 (218)
Q Consensus 164 Ds~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l 196 (218)
|+. .|+++| +++||.+++|.||+.+.+.+
T Consensus 116 Ds~~~Di~aA----~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 116 DRLFTDVMGG----NRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred CcchHHHHHH----HHcCCeEEEEccCcCCcccc
Confidence 998 699999 99999999999999876544
No 52
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.47 E-value=8.6e-13 Score=108.01 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHH----HHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l~~~~~~~~~e 158 (218)
.+.+++.++|+.| +.+++|+||+++..++..|+. +|+..+|+.++++++. |+|+ ++++++++++ +
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~----~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEAC----H 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcc----c
Confidence 3555568888877 469999999999999999999 9999999999998764 7776 5555665554 4
Q ss_pred eEEEcCchhhHHhcccccccc
Q 027798 159 LHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~a 179 (218)
|+||||+.+|+++| ++|
T Consensus 181 ~i~vGD~~~Di~aA----~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITG----RKA 197 (197)
T ss_pred EEEEeCCHHHHHHH----HhC
Confidence 99999999999999 764
No 53
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.46 E-value=1.6e-13 Score=105.39 Aligned_cols=93 Identities=32% Similarity=0.383 Sum_probs=72.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc--------hHHHHHHHHHhcCCCCCCCeeEeCC-CC-ChHHHHHHhhhcC-C
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ--------SRFVETLLRELAGVTITPDRLYGLG-TG-PKVNVLKQLQKKP-E 153 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~--------~~~~~~~L~~~~gl~~~fd~i~~~~-~~-pKPe~l~~l~~~~-~ 153 (218)
..+|||+.++|+.| +.+++|+||++ ...+...+++ +|+. |+.++.+. .. |+|+++..+..+. .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~ 100 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVP--IDVLYACPHCRKPKPGMFLEALKRFNE 100 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCC--EEEEEECCCCCCCChHHHHHHHHHcCC
Confidence 57999999999988 46999999999 8889999999 9986 34444333 22 7777544444443 2
Q ss_pred CCCCceEEEcC-chhhHHhccccccccCccEEEEe
Q 027798 154 HQGLRLHFVED-RLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 154 ~~~~e~l~IGD-s~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.+|++++|||| +..|+.+| +++|+.+|++.
T Consensus 101 ~~~~~~v~IGD~~~~Di~~A----~~~Gi~~i~~~ 131 (132)
T TIGR01662 101 IDPEESVYVGDQDLTDLQAA----KRAGLAFILVA 131 (132)
T ss_pred CChhheEEEcCCCcccHHHH----HHCCCeEEEee
Confidence 45666999999 79999999 99999999985
No 54
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.45 E-value=1.6e-12 Score=101.95 Aligned_cols=84 Identities=21% Similarity=0.255 Sum_probs=70.5
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC---ChHH----HHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG---PKVN----VLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~---pKPe----~l~~l~~~~~~~ 155 (218)
.....+||+.++|+.| +.+++|+||+++..+...+++ + +..+|+.|+++++. |+|+ ++++++.+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~---- 134 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLP---- 134 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCC----
Confidence 3456789999999988 469999999999999999998 7 89999999998754 6666 45555554
Q ss_pred CCceEEEcCchhhHHhccccccccC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
| +|+||||+..|+++| +++|
T Consensus 135 ~-~~l~iGDs~~Di~aa----~~aG 154 (154)
T TIGR01549 135 P-EVLHVGDNLNDIEGA----RNAG 154 (154)
T ss_pred C-CEEEEeCCHHHHHHH----HHcc
Confidence 4 599999999999999 9987
No 55
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.44 E-value=1.8e-13 Score=109.54 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=68.7
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-C---ChHH----HHHHhhhcCCCCCCc
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-G---PKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-~---pKPe----~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+ +++|+||++...++..+++ +|+..+||.|++++. + |+|+ ++++++++|++
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~---- 158 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDR---- 158 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHH----
Confidence 4679999999998 5899999999999999999 999999999999875 3 6666 66666665555
Q ss_pred eEEEcCchhhHHhcccccccc
Q 027798 159 LHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~a 179 (218)
|+||||+..|+++| +++
T Consensus 159 ~l~vgD~~~Di~~A----~~~ 175 (175)
T TIGR01493 159 VLMVAAHQWDLIGA----RKF 175 (175)
T ss_pred eEeEecChhhHHHH----hcC
Confidence 99999999999999 764
No 56
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.42 E-value=2.3e-13 Score=107.14 Aligned_cols=87 Identities=16% Similarity=0.086 Sum_probs=76.1
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCCCC--ChHH---HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVN---VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~~~--pKPe---~l~~l~~~~~~~~~e~ 159 (218)
..++||+.++|+.|+ .+++|+||+++..++.++++ +++.. +|+.|+++++. .||. +++.++.++++ |
T Consensus 44 v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~----~ 118 (148)
T smart00577 44 VKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSN----V 118 (148)
T ss_pred EEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhc----E
Confidence 478999999999984 59999999999999999999 99965 56999998765 7887 77778776666 9
Q ss_pred EEEcCchhhHHhccccccccCccE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+||||+..|+++| +++||.+
T Consensus 119 i~i~Ds~~~~~aa----~~ngI~i 138 (148)
T smart00577 119 IIIDDSPDSWPFH----PENLIPI 138 (148)
T ss_pred EEEECCHHHhhcC----ccCEEEe
Confidence 9999999999999 9999865
No 57
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.42 E-value=6e-12 Score=103.12 Aligned_cols=118 Identities=12% Similarity=0.079 Sum_probs=86.0
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE---------eCCCC---ChHHHHHHhhh
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLY---------GLGTG---PKVNVLKQLQK 150 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~---------~~~~~---pKPe~l~~l~~ 150 (218)
.....+|||+.++|+.|+ .+++|+||+....++..+++ +|+..+|+..+ +.+.. +|+.+++.++.
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 355789999999999885 59999999999999999999 99998886433 22211 34457777776
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+++ |+||||+.+|+.+| +++|+.+ .+++. . ......++. ..+.++.+|.+.+
T Consensus 143 ~~~~----~v~iGDs~~D~~~~----~aa~~~v---~~~~~-~-~~~~~~~~~-~~~~~~~el~~~l 195 (205)
T PRK13582 143 LGYR----VIAAGDSYNDTTML----GEADAGI---LFRPP-A-NVIAEFPQF-PAVHTYDELLAAI 195 (205)
T ss_pred hCCe----EEEEeCCHHHHHHH----HhCCCCE---EECCC-H-HHHHhCCcc-cccCCHHHHHHHH
Confidence 6655 99999999999999 9999743 34432 2 232333442 2456888887654
No 58
>PLN02954 phosphoserine phosphatase
Probab=99.41 E-value=2.5e-12 Score=106.88 Aligned_cols=120 Identities=18% Similarity=0.295 Sum_probs=87.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC--CCCCe---------eEeCC------CC-ChHHHHH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT--ITPDR---------LYGLG------TG-PKVNVLK 146 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~--~~fd~---------i~~~~------~~-pKPe~l~ 146 (218)
..++||+.++|+.+ +.+++|+||+....++.+++. +|+. .+|+. +.|.+ .. +||+++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 46899999999987 469999999999999999999 9996 35532 22221 11 7998777
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+..... .++|+||||+.+|+.+| +++|+.++.+ ||+....+.....++ +.+.++.+|.+.+
T Consensus 162 ~~~~~~~--~~~~i~iGDs~~Di~aa----~~~~~~~~~~-~~~~~~~~~~~~~~~--~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHG--YKTMVMIGDGATDLEAR----KPGGADLFIG-YGGVQVREAVAAKAD--WFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcC--CCceEEEeCCHHHHHhh----hcCCCCEEEe-cCCCccCHHHHhcCC--EEECCHHHHHHhh
Confidence 6654422 24599999999999999 9999887654 554332233344555 5566999998765
No 59
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.39 E-value=6.8e-13 Score=106.61 Aligned_cols=89 Identities=25% Similarity=0.312 Sum_probs=67.0
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchH------------HHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSR------------FVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQK 150 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~------------~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~ 150 (218)
+|||+.++|+.| |.+++|+||++.. .++.+|++ +|+.. +.+++++.. |+|+++..+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 799999999988 4699999999874 56788999 99853 556655432 66664444333
Q ss_pred cCC--CCCCceEEEcCch--------hhHHhccccccccCccEEE
Q 027798 151 KPE--HQGLRLHFVEDRL--------ATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 151 ~~~--~~~~e~l~IGDs~--------~Di~aA~~~~~~aGi~~i~ 185 (218)
... .++++|+||||+. +|+++| +++|+++++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA----~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFA----KNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHH----HHCCCCcCC
Confidence 333 4556699999996 699999 999998864
No 60
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.36 E-value=3.4e-12 Score=105.77 Aligned_cols=121 Identities=14% Similarity=0.074 Sum_probs=86.8
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee-------EeC----CC--C-ChHHHHHH
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL-------YGL----GT--G-PKVNVLKQ 147 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i-------~~~----~~--~-pKPe~l~~ 147 (218)
.....++||+.++|+.| +.+++|+||+....++..+++ +|+..+|+.. +.. .. . |||++++.
T Consensus 81 ~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 159 (219)
T TIGR00338 81 RENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLI 159 (219)
T ss_pred HhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHH
Confidence 34567999999999988 469999999999999999999 9999888532 111 11 1 58886665
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+..+.+.++++|+||||+.+|+.+| +++|+.++ + + ..+.+. ..++.++.=.++.++...
T Consensus 160 ~~~~~~~~~~~~i~iGDs~~Di~aa----~~ag~~i~-~--~--~~~~~~-~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 160 LLRKEGISPENTVAVGDGANDLSMI----KAAGLGIA-F--N--AKPKLQ-QKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHcCCCHHHEEEEECCHHHHHHH----HhCCCeEE-e--C--CCHHHH-HhchhccCCCCHHHHHhh
Confidence 5444445566699999999999999 99999753 2 2 123332 345555655577777654
No 61
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.36 E-value=2.8e-13 Score=115.99 Aligned_cols=124 Identities=12% Similarity=0.061 Sum_probs=89.0
Q ss_pred CCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC---C---C-ChHHHHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG---T---G-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~---~---~-pKPe~l~~l~~~~~~~~~e 158 (218)
-.|+++.++++.|. .+++|+||+++......+.. +|+..+|+.+.++. . + |+|+++.....+.+.+|++
T Consensus 120 ~~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~ 198 (257)
T TIGR01458 120 FSYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEE 198 (257)
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhh
Confidence 35788888888773 48899999998887777777 89999998777542 2 2 6666333333222334555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+||||+. +|+.+| +++|+++++|.||....++.......+.+.+.++.||.+.|
T Consensus 199 ~~~vGD~~~~Di~~a----~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 199 AVMIGDDCRDDVGGA----QDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEEECCCcHHHHHHH----HHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99999996 899999 99999999999997554433222233446667999987654
No 62
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.36 E-value=2.4e-13 Score=117.49 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCcccHHHHHHhcC--CCEEEEeCCchHHH-HHHHHHhcCCCCCCCeeEe---CCC---C-ChHHHHHHhhhcCCCCCCc
Q 027798 89 RLYPGVSDALKLAS--SRIYIVTSNQSRFV-ETLLRELAGVTITPDRLYG---LGT---G-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 89 ~l~~gv~e~L~~L~--~~l~IvTn~~~~~~-~~~L~~~~gl~~~fd~i~~---~~~---~-pKPe~l~~l~~~~~~~~~e 158 (218)
.-|+|+.++|+.|. ..++|+||++.... ...+.. .|+..+|+.+.+ .+. + |+|+++..+....+.+|++
T Consensus 143 ~~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~ 221 (279)
T TIGR01452 143 FSYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPAR 221 (279)
T ss_pred CCHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhh
Confidence 35899999999884 35899999997543 222344 577777776643 332 1 6666333333333345555
Q ss_pred eEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhh------cCCCceEEechhhH
Q 027798 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA------ASMPRIQLLQLSDF 213 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~------~~~~~i~~~~l~el 213 (218)
|+||||+. +||++| +++||++++|.||+.+.+++... ...|.+.+.++.+|
T Consensus 222 ~lmIGD~~~tDI~~A----~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 222 TLMVGDRLETDILFG----HRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEEECCChHHHHHHH----HHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999995 899999 99999999999999998887642 12244666677664
No 63
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.35 E-value=7.2e-12 Score=104.38 Aligned_cols=115 Identities=15% Similarity=0.239 Sum_probs=82.6
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE------eCCCC-----------------
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY------GLGTG----------------- 139 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~------~~~~~----------------- 139 (218)
....++||+.++|+.+ +.+++|+||+....++.+|++ + +.. +.++ +.+..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPK--EQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCc--CcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 4578999999999987 469999999999999999999 7 643 2333 22211
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.|+.++++++..+.. |+||||+.+|+.+| ++||+.++ . + ...+.......+.+.+.++.|+.+.|
T Consensus 147 ~~K~~~l~~~~~~~~~----~i~iGDs~~Di~aa----~~Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 147 CCKPSLIRKLSDTNDF----HIVIGDSITDLEAA----KQADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred CchHHHHHHhccCCCC----EEEEeCCHHHHHHH----HHCCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 255688888776665 99999999999999 99999333 2 2 11111123444567778999887665
No 64
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.35 E-value=6.6e-12 Score=111.95 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=76.4
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCC---------------chHHHHHHHHHhcCCCCCCCee-EeC----CC-C
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSN---------------QSRFVETLLRELAGVTITPDRL-YGL----GT-G 139 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~---------------~~~~~~~~L~~~~gl~~~fd~i-~~~----~~-~ 139 (218)
+.+...+|||+.++|+.| +.+++|+||+ ....+..+++. +|+. |+.+ ++. +. .
T Consensus 25 ~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~ 101 (354)
T PRK05446 25 SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCS 101 (354)
T ss_pred CcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCC
Confidence 345678999999999988 3599999996 35567778888 8884 7765 442 22 2
Q ss_pred ---ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 ---PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 ---pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|+|+++..+..+...+|++++||||+.+|+++| +++||++++|+..
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA----k~aGi~~I~v~~~ 150 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA----ENMGIKGIRYARE 150 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH----HHCCCeEEEEECC
Confidence 777766655555555667799999999999999 9999999999543
No 65
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.33 E-value=1.6e-11 Score=98.78 Aligned_cols=88 Identities=14% Similarity=0.255 Sum_probs=74.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-----------------------C-
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----------------------G- 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-----------------------~- 139 (218)
...++||+.++|+.| +.+++|+||+....++..+++ +|+..+|+.|+|++. +
T Consensus 70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCC
Confidence 368999999999987 469999999999999999999 999999999997521 2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
+||++++++..+. +++++||||+.+|+.+| +++++-
T Consensus 149 ~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa----~~~d~~ 184 (188)
T TIGR01489 149 CKGKVIHKLSEPK---YQHIIYIGDGVTDVCPA----KLSDVV 184 (188)
T ss_pred CHHHHHHHHHhhc---CceEEEECCCcchhchH----hcCCcc
Confidence 6888999887651 34499999999999999 998763
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.27 E-value=1.4e-11 Score=100.26 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=75.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-CC-------------ChHHHHHH
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-TG-------------PKVNVLKQ 147 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-~~-------------pKPe~l~~ 147 (218)
.....++||+.++|+.| +.+++|+||+....++.++++ +|+..+|+.++..+ .+ +|++++..
T Consensus 76 ~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~ 154 (201)
T TIGR01491 76 FKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVER 154 (201)
T ss_pred HHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHH
Confidence 34568999999999988 469999999999999999999 99988876655432 22 23345444
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+....+.++++|+||||+.+|+.+| +++|+.++....+
T Consensus 155 ~~~~~~~~~~~~i~iGDs~~D~~~a----~~ag~~~a~~~~~ 192 (201)
T TIGR01491 155 LKRELNPSLTETVAVGDSKNDLPMF----EVADISISLGDEG 192 (201)
T ss_pred HHHHhCCCHHHEEEEcCCHhHHHHH----HhcCCeEEECCCc
Confidence 4333334555699999999999999 9999977654433
No 67
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.26 E-value=6.3e-12 Score=96.70 Aligned_cols=79 Identities=22% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCC-chHHHHHHHHHhcC-------CCCCCCeeEeCCCCChHH----HHHHhh--hc
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSN-QSRFVETLLRELAG-------VTITPDRLYGLGTGPKVN----VLKQLQ--KK 151 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~-~~~~~~~~L~~~~g-------l~~~fd~i~~~~~~pKPe----~l~~l~--~~ 151 (218)
.+|||+.++|+.| +.+++|+||+ ....+...+++ ++ +..+|+.+++++..|||+ ++++++ +.
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 4899999999988 4699999999 88888899998 88 899999999886568887 666666 55
Q ss_pred CCCCCCceEEEcCchhhHHhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA 172 (218)
|++ |+||||+..|+.+.
T Consensus 108 p~~----~l~igDs~~n~~~~ 124 (128)
T TIGR01681 108 PKS----ILFVDDRPDNNEEV 124 (128)
T ss_pred cce----EEEECCCHhHHHHH
Confidence 555 99999999998876
No 68
>PLN02645 phosphoglycolate phosphatase
Probab=99.25 E-value=3.8e-12 Score=111.83 Aligned_cols=111 Identities=19% Similarity=0.172 Sum_probs=79.3
Q ss_pred CCEEEEeCCchHH-HHHHHHHhcCCCCCCCeeEeCCCC-------ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhcc
Q 027798 103 SRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTG-------PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVI 173 (218)
Q Consensus 103 ~~l~IvTn~~~~~-~~~~L~~~~gl~~~fd~i~~~~~~-------pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~ 173 (218)
..++|+||++... ....+.. .|+..+|+.+.+.... |+|+++.......+.++++++||||+. +|+++|
T Consensus 187 g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A- 264 (311)
T PLN02645 187 GCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG- 264 (311)
T ss_pred CCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH-
Confidence 4799999999754 3344455 7888889888765321 455544433333334555599999997 899999
Q ss_pred ccccccCccEEEEeCCCCCHHHHHhh--cCCCceEEechhhHhhhcC
Q 027798 174 KEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLLQLSDFCTKLK 218 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G~~~~~~l~~~--~~~~~i~~~~l~el~~~~~ 218 (218)
+++|+++++|.||+.+.+++... ...|.+.+.++.+|.++++
T Consensus 265 ---~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 265 ---QNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred ---HHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99999999999999988877542 1234467779999987653
No 69
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.21 E-value=3.9e-11 Score=90.00 Aligned_cols=95 Identities=25% Similarity=0.233 Sum_probs=76.7
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------------------ChHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------------------PKVN 143 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------------------pKPe 143 (218)
...+++++.++|+.| +.+++|+||+.+..++..++. +|+..+|+.+++++.. ||++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 357999999999988 358999999999999999999 9999999998876532 3455
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEE
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
..+.+......++++++||||+.+|+++| +++|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~----~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMA----KAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHH----HHcCCceeeC
Confidence 44444444344466699999999999999 9999998875
No 70
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.20 E-value=2e-11 Score=85.23 Aligned_cols=70 Identities=21% Similarity=0.251 Sum_probs=52.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCc-hhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDR-LATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
|+|.++.......+.++++|+||||+ .+||++| +++|+.+++|.+|..+.+++......+.+.+.||.|+
T Consensus 5 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a----~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 5 PSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAA----KAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp TSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHH----HHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHH----HHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 66664433333333345559999999 8999999 9999999999999998877764445555777799875
No 71
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.18 E-value=7.7e-11 Score=93.39 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=66.1
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
.+.|++-+.+++|+||++...+...+++ +|+..+|+. ..|||+.+.++......++++|+||||+.+|+.++
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~-- 108 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM-- 108 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH--
Confidence 4444445679999999999999999999 999887762 13889855555444444556699999999999999
Q ss_pred cccccCccEEEEeCCC
Q 027798 175 EPELDGWNLYLVDWGY 190 (218)
Q Consensus 175 ~~~~aGi~~i~v~~G~ 190 (218)
+++|+. +++.++.
T Consensus 109 --~~ag~~-~~v~~~~ 121 (154)
T TIGR01670 109 --EKVGLS-VAVADAH 121 (154)
T ss_pred --HHCCCe-EecCCcC
Confidence 999996 7776653
No 72
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.17 E-value=1.7e-10 Score=96.71 Aligned_cols=117 Identities=17% Similarity=0.139 Sum_probs=87.9
Q ss_pred hhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC-CCCCCCeeEeCC--CC----ChHH----HHHHhhh
Q 027798 85 IGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG-VTITPDRLYGLG--TG----PKVN----VLKQLQK 150 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g-l~~~fd~i~~~~--~~----pKPe----~l~~l~~ 150 (218)
.....++||+..+++.| +.+++++|+.++...+..+++ ++ +...|..++..+ .. |+|+ +++.++.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 35678999999999998 469999999999999999988 77 888888877632 21 6666 6666776
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
.+ |+.|++++|++.++++| ++|||++|++... . ........+. +.++++.++
T Consensus 167 ~~---~~k~lVfeds~~Gv~aa----~aagm~vi~v~~~-~-~~~~~~~~~~--~~~~~~~~~ 218 (222)
T KOG2914|consen 167 PP---PSKCLVFEDSPVGVQAA----KAAGMQVVGVATP-D-LSNLFSAGAT--LILESLEDF 218 (222)
T ss_pred CC---ccceEEECCCHHHHHHH----HhcCCeEEEecCC-C-cchhhhhccc--eeccccccc
Confidence 65 46699999999999999 9999999999761 1 1112223333 555566554
No 73
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.16 E-value=9.2e-10 Score=91.23 Aligned_cols=116 Identities=11% Similarity=0.103 Sum_probs=83.1
Q ss_pred hcCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeE------eC-C--CC-ChHHHHHHhhhc
Q 027798 86 GANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPD--RLY------GL-G--TG-PKVNVLKQLQKK 151 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~------~~-~--~~-pKPe~l~~l~~~ 151 (218)
....++||+.++|+.++ .+++|+||+....++.++++ +|+..+|. ..+ +. . .. +|..+++.+...
T Consensus 65 ~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~ 143 (203)
T TIGR02137 65 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSL 143 (203)
T ss_pred HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhh
Confidence 34579999999999874 49999999999999999999 99998885 222 11 1 11 445577777543
Q ss_pred CCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCC-CceEEechhhHhhhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASM-PRIQLLQLSDFCTKL 217 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~-~~i~~~~l~el~~~~ 217 (218)
.. +|+||||+.+|+.++ +.||+.++... ++......++ +.+ .+..||.+.+
T Consensus 144 ~~----~~v~vGDs~nDl~ml----~~Ag~~ia~~a-----k~~~~~~~~~~~~~--~~~~~~~~~~ 195 (203)
T TIGR02137 144 YY----RVIAAGDSYNDTTML----SEAHAGILFHA-----PENVIREFPQFPAV--HTYEDLKREF 195 (203)
T ss_pred CC----CEEEEeCCHHHHHHH----HhCCCCEEecC-----CHHHHHhCCCCCcc--cCHHHHHHHH
Confidence 33 499999999999999 99999876542 2333333333 333 4788877654
No 74
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.15 E-value=5.1e-11 Score=100.44 Aligned_cols=92 Identities=24% Similarity=0.317 Sum_probs=76.0
Q ss_pred CCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-CCC-ChHH------HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-GTG-PKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~~~-pKPe------~l~~l~~~~~~~~ 156 (218)
....+++.++|+.|+ ..++|+||-....- .++.. +|+..+||+|+.| +.+ .||| +++.++++|++
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee-- 187 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE-- 187 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH--
Confidence 467788889999884 48999999997665 77787 9999999999876 455 5554 77888877666
Q ss_pred CceEEEcCch-hhHHhccccccccCccEEEEeCC
Q 027798 157 LRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 157 ~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|++|||+. +|+++| +++||+++.|...
T Consensus 188 --~vhIgD~l~nD~~gA----~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 188 --CVHIGDLLENDYEGA----RNLGWHAILVDNS 215 (237)
T ss_pred --eEEecCccccccHhH----HHcCCEEEEEccc
Confidence 99999996 689999 9999999999754
No 75
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.15 E-value=1.1e-10 Score=110.09 Aligned_cols=113 Identities=18% Similarity=0.221 Sum_probs=90.9
Q ss_pred cCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEE
Q 027798 87 ANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
...++||+.++|+.| + .+++|+||+++..++.++++ +|+..+|..+ .. +|++.+++++..++. |+|
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~----~p~~K~~~v~~l~~~~~~----v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAEL----LPEDKLAIVKELQEEGGV----VAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccC----CHHHHHHHHHHHHHcCCE----EEE
Confidence 357999999999988 6 79999999999999999999 9998777643 22 678899998876555 999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|||+.+|+.++ ++|| +++.||.++ +.....++.++.-.++..+...+
T Consensus 453 vGDg~nD~~al----~~A~---vgia~g~~~--~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 453 VGDGINDAPAL----AAAD---VGIAMGAGS--DVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EECChhHHHHH----hhCC---EeEEeCCCC--HHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999999 9999 688888543 33345677666655787776654
No 76
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.14 E-value=6.8e-10 Score=92.24 Aligned_cols=117 Identities=12% Similarity=0.199 Sum_probs=79.9
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC---CeeEeCCCC----C--------------hH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP---DRLYGLGTG----P--------------KV 142 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f---d~i~~~~~~----p--------------KP 142 (218)
...++||+.++|+.+ +.+++|+|++....++.++++ ++...+| +.+++.+.. | |.
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 468999999999988 469999999999999999998 7554443 233332211 3 34
Q ss_pred HHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 143 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.++++++..++. ++||||+.+|+.+| ++||+ +.+. ++ ..........+.+.+.+..|+.+.|
T Consensus 147 ~~l~~~~~~~~~----~i~iGDg~~D~~~a----~~Ad~--~~ar-~~--l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 147 SLIRKLSEPNDY----HIVIGDSVTDVEAA----KQSDL--CFAR-DY--LLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHhhcCCc----EEEEeCCHHHHHHH----HhCCe--eEeh-HH--HHHHHHHcCCCccCcCCHHHHHHHH
Confidence 577777765554 99999999999999 99998 2222 21 1111122222456667888876654
No 77
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.09 E-value=1.7e-10 Score=92.99 Aligned_cols=79 Identities=19% Similarity=0.196 Sum_probs=64.7
Q ss_pred HHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 96 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
..|+..+.+++|+||++...++..+++ +|+..+|+.+ .|||+.+..+......++++|+||||+.+|+.++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~--- 114 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMM--- 114 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHH---
Confidence 456666889999999999999999999 9999888743 3889855555554455566699999999999999
Q ss_pred ccccCccEE
Q 027798 176 PELDGWNLY 184 (218)
Q Consensus 176 ~~~aGi~~i 184 (218)
+.+|+.++
T Consensus 115 -~~ag~~~a 122 (169)
T TIGR02726 115 -KRVGLAVA 122 (169)
T ss_pred -HHCCCeEE
Confidence 99998654
No 78
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.09 E-value=5.9e-10 Score=90.76 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=73.6
Q ss_pred HHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccc
Q 027798 96 DALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~ 175 (218)
..|+..+.+++|+||++...+..++++ +|+..+|+ +.+ +||+.+..+..+...++++|+||||+.+|+.+|
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g~~--~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a--- 128 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---GQS--NKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM--- 128 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---CCC--cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH---
Confidence 344555789999999999999999999 99987775 222 788855444444444555599999999999999
Q ss_pred ccccCccEEEEeCCCCCHHHHHhhcCCCceEE----echhhHhhh
Q 027798 176 PELDGWNLYLVDWGYNTPKERAEAASMPRIQL----LQLSDFCTK 216 (218)
Q Consensus 176 ~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~----~~l~el~~~ 216 (218)
+++|+.+ ++. +..++....+++++.- ..+.||.+.
T Consensus 129 -~~aG~~~-~v~----~~~~~~~~~a~~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 129 -EKVGLSV-AVA----DAHPLLLPRADYVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -HHCCCeE-ecC----ChhHHHHHhCCEEecCCCCCCHHHHHHHH
Confidence 9999984 453 2334444556644321 145666554
No 79
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.08 E-value=3.6e-10 Score=106.18 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=90.5
Q ss_pred cCCCcccHHHHHHhc---CC-CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEE
Q 027798 87 ANRLYPGVSDALKLA---SS-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFV 162 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~-~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+.| |. +++|+||++...++.++++ +|+..+|..+. ..+|++++++++.+.++ ++||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~~~~~----v~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELREKYGP----VAMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHhcCCE----EEEE
Confidence 357999999999988 57 9999999999999999999 99988775331 11778899999876655 9999
Q ss_pred cCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 163 EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 163 GDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
||+.+|+.++ ++||+ ++.||+.. .+.....++.++.-.++.++.+.+
T Consensus 432 GDg~nD~~al----~~A~v---gia~g~~~-~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPAL----AAADV---GIAMGASG-SDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHH----HhCCE---EEEeCCCc-cHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999 99994 88898642 233344667555446888887654
No 80
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.06 E-value=2.1e-09 Score=88.84 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=77.1
Q ss_pred CCCcccHHHHHHhcCCC-EEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC----------ChHH----HHHHhhhcC
Q 027798 88 NRLYPGVSDALKLASSR-IYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG----------PKVN----VLKQLQKKP 152 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~~~-l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~----------pKPe----~l~~l~~~~ 152 (218)
..|=+-.+++|-.|+.+ ..+.||+.+..+.++|++ +||.++||.|++.+.. |.|+ +++..++.
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~- 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID- 176 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC-
Confidence 45666788888888765 999999999999999999 9999999999986522 4445 44555554
Q ss_pred CCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 153 EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+|..++||+||..+|++| ++.|+.++.+.-..
T Consensus 177 --~p~~t~FfDDS~~NI~~a----k~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 177 --SPRNTYFFDDSERNIQTA----KEVGLKTVLVGREH 208 (244)
T ss_pred --CcCceEEEcCchhhHHHH----HhccceeEEEEeee
Confidence 255599999999999999 99999999886543
No 81
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.06 E-value=8.6e-10 Score=97.48 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=85.9
Q ss_pred hhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC-------eeE-e---CCC--C-ChHHHHH
Q 027798 84 WIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD-------RLY-G---LGT--G-PKVNVLK 146 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-------~i~-~---~~~--~-pKPe~l~ 146 (218)
+....+++||+.++|+.| +.+++|+|++...+++.++++ +|+...+. ..+ | .+. . +||++++
T Consensus 176 v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~ 254 (322)
T PRK11133 176 VRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLT 254 (322)
T ss_pred HHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHH
Confidence 345678999999999877 469999999999999999999 99865332 111 1 121 2 8898666
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
++..+.+.++++|++|||+.+|+.++ ++||+.++ | ...+ .+ ...++..+...+|..+.-+
T Consensus 255 ~la~~lgi~~~qtIaVGDg~NDl~m~----~~AGlgiA---~-nAkp-~V-k~~Ad~~i~~~~l~~~l~~ 314 (322)
T PRK11133 255 RLAQEYEIPLAQTVAIGDGANDLPMI----KAAGLGIA---Y-HAKP-KV-NEQAQVTIRHADLMGVLCI 314 (322)
T ss_pred HHHHHcCCChhhEEEEECCHHHHHHH----HHCCCeEE---e-CCCH-HH-HhhCCEEecCcCHHHHHHH
Confidence 66555555666699999999999999 99998554 3 1233 33 3456666665566665443
No 82
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.97 E-value=5e-09 Score=85.56 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=82.4
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCe-e
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDR-L 133 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~-i 133 (218)
.|++.+++.....++.+.+. ...++||+.++|+.+ +.+++|+|++....++.++++ +|+..+|.. +
T Consensus 65 ~g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l 134 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRL 134 (202)
T ss_pred cCCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecce
Confidence 36777766666555443321 236899999999876 469999999999999999999 999887754 2
Q ss_pred EeCCC-------------C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEE
Q 027798 134 YGLGT-------------G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 134 ~~~~~-------------~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
...++ + +|++.++++..+.+.++++|++||||.+|+.++ +.+|..++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~----~~a~~~~~v 196 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLL----SLVGHPYVV 196 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHH----HhCCCcEEe
Confidence 22111 1 455556665444455566799999999999999 999987643
No 83
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.96 E-value=2.9e-09 Score=100.59 Aligned_cols=111 Identities=17% Similarity=0.220 Sum_probs=85.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.++|+.| +.+++|+||+++..++.++++ +|+. +++.-.. +|++.+++++.+++. |+|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~~~~~----v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQEKGRV----VAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHHcCCE----EEEEe
Confidence 46899999999987 469999999999999999999 9995 3333222 777888888875555 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|+.++ ++||+ ++.||+++ +.....++.++.-.++.++...+
T Consensus 474 Dg~nD~~al----~~A~v---gia~g~g~--~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 474 DGINDAPAL----AQADV---GIAIGAGT--DVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCCccHHHH----hhCCE---EEEeCCcC--HHHHhhCCEEEeCCCHHHHHHHH
Confidence 999999999 99995 67888664 34444566444334777766544
No 84
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.95 E-value=1.8e-09 Score=95.85 Aligned_cols=92 Identities=12% Similarity=0.155 Sum_probs=74.0
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhc-C-------CCCCCCeeEeCCCCC------hH-------
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELA-G-------VTITPDRLYGLGTGP------KV------- 142 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~-g-------l~~~fd~i~~~~~~p------KP------- 142 (218)
.+.++||+.++|+.| |++++|+||++...++.+|+. + | +.++||.|+++...| +|
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 356799999999988 469999999999999999999 6 7 899999999865321 01
Q ss_pred ------H------------------HHHHhhhcCCCCCCceEEEcCch-hhHHhcccccc-ccCccEEEEe
Q 027798 143 ------N------------------VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPE-LDGWNLYLVD 187 (218)
Q Consensus 143 ------e------------------~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~-~aGi~~i~v~ 187 (218)
. ..+.++.++ ++++||||.. .|+.+| + .+||.+++|.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~----~~vlYvGD~i~~Di~~~----kk~~Gw~TvlI~ 323 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRG----KEVLYFGDHIYGDLLRS----KKKRGWRTAAII 323 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCC----CcEEEECCcchHHHHhh----HHhcCcEEEEEc
Confidence 0 334445444 4599999997 599999 8 8999999996
No 85
>PRK10444 UMP phosphatase; Provisional
Probab=98.95 E-value=4e-10 Score=96.15 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=54.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~ 214 (218)
|+|+++.........++++|+||||+. +|+.+| +++|+++++|.||+.+.+++......|.+.+.++.+|.
T Consensus 175 P~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A----~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG----FQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHH----HHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 777744444333344566699999997 899999 99999999999999998887653344557777998873
No 86
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.95 E-value=6.6e-08 Score=83.61 Aligned_cols=153 Identities=16% Similarity=0.171 Sum_probs=93.5
Q ss_pred CCCHHHH---HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeC
Q 027798 37 GLTVEGI---LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTS 110 (218)
Q Consensus 37 ~~s~~~i---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn 110 (218)
.+|.+|. +..|......++...+++.+.+.+.+.+ ....+.||+.++|+.| +.+++|+|+
T Consensus 80 ~~~~~eK~~~m~eWw~k~~~l~~~~~~~~e~i~~~v~~--------------~~l~l~pG~~efl~~L~~~GIpv~IvS~ 145 (277)
T TIGR01544 80 VLTVEEKYPYMVEWWTKSHGLLVQQAFPKAKIKEIVAE--------------SDVMLKDGYENFFDKLQQHSIPVFIFSA 145 (277)
T ss_pred CCChHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHhh--------------cCCccCcCHHHHHHHHHHCCCcEEEEeC
Confidence 3444443 4555555556666666665544433321 2468999999999987 469999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCeeEe------CCC---C-C--------hHH-HHHHhhhcCC--CCCCceEEEcCchhhH
Q 027798 111 NQSRFVETLLRELAGVTITPDRLYG------LGT---G-P--------KVN-VLKQLQKKPE--HQGLRLHFVEDRLATL 169 (218)
Q Consensus 111 ~~~~~~~~~L~~~~gl~~~fd~i~~------~~~---~-p--------KPe-~l~~l~~~~~--~~~~e~l~IGDs~~Di 169 (218)
+....++.+|++ +|+...+..|++ .+. + + |.+ ++.......+ .+++.|++|||+.+|+
T Consensus 146 G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl 224 (277)
T TIGR01544 146 GIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDL 224 (277)
T ss_pred CcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhh
Confidence 999999999999 999877777733 221 1 2 333 3322211111 3455699999999999
Q ss_pred Hhcccccccc-Cc-cEEEEeCCCCCHHH-HHhhcCCCceEEe
Q 027798 170 KNVIKEPELD-GW-NLYLVDWGYNTPKE-RAEAASMPRIQLL 208 (218)
Q Consensus 170 ~aA~~~~~~a-Gi-~~i~v~~G~~~~~~-l~~~~~~~~i~~~ 208 (218)
.|| ... +. .++-+.+=....++ +..+...+.|.+.
T Consensus 225 ~ma----~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 225 RMA----DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred hHh----cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 999 433 21 22222222233344 4445555556544
No 87
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.95 E-value=3.2e-10 Score=96.61 Aligned_cols=120 Identities=15% Similarity=0.150 Sum_probs=72.9
Q ss_pred CCcccHHHHHHhcC-CCEEEEeCCchHHHHH--HH-HHhcCCCCCCCeeEeCCCC----ChHHHHHHhhhcCCCCCCceE
Q 027798 89 RLYPGVSDALKLAS-SRIYIVTSNQSRFVET--LL-RELAGVTITPDRLYGLGTG----PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 89 ~l~~gv~e~L~~L~-~~l~IvTn~~~~~~~~--~L-~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~~~~~~~~e~l 160 (218)
..|+.+...+..+. ....|+||.+...... .+ .. -.+...++.+.+.+.. |+|++++.+....+.++++++
T Consensus 121 ~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~-G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 199 (249)
T TIGR01457 121 IDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGN-GSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETL 199 (249)
T ss_pred CCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCc-HHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEE
Confidence 35555555555552 2347888877643311 00 11 1112233444454432 666644444333334555599
Q ss_pred EEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhH
Q 027798 161 FVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDF 213 (218)
Q Consensus 161 ~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el 213 (218)
||||+. +|+.+| +++|+++++|.||+.+.+++......|.+.+.++.+|
T Consensus 200 ~VGD~~~~Di~~a----~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 200 MVGDNYLTDIRAG----IDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EECCCchhhHHHH----HHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 999997 899999 9999999999999998877655333444666677664
No 88
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.84 E-value=9.2e-10 Score=93.16 Aligned_cols=91 Identities=12% Similarity=0.076 Sum_probs=67.3
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee--EeCCCC----ChHHHHHHhhhcCCC-CCCceE
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL--YGLGTG----PKVNVLKQLQKKPEH-QGLRLH 160 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i--~~~~~~----pKPe~l~~l~~~~~~-~~~e~l 160 (218)
|+++.++|+.+ +.++ |+||++.......+.. +|...+|..+ .|.+.. |+|+++.....+.+. ++++|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 78999999875 3466 9999999888777787 8888888765 555432 666644333222222 234599
Q ss_pred EEcCc-hhhHHhccccccccCccEEEEe
Q 027798 161 FVEDR-LATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs-~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||+ .+|+.+| +++|+++++|.
T Consensus 218 ~vGD~~~~Di~~a----~~~G~~~i~v~ 241 (242)
T TIGR01459 218 MVGDSFYTDILGA----NRLGIDTALVL 241 (242)
T ss_pred EECCCcHHHHHHH----HHCCCeEEEEe
Confidence 99999 5999999 99999999985
No 89
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.83 E-value=1.8e-08 Score=80.15 Aligned_cols=86 Identities=22% Similarity=0.294 Sum_probs=67.4
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCCceE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~e~l 160 (218)
...-|.+.+-+..+ +.++.|+||+++..+....++ +|+ ++|+.+-- |-+- ++++++.++++ |+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v----~fi~~A~K-P~~~~fr~Al~~m~l~~~~----vv 114 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGV----PFIYRAKK-PFGRAFRRALKEMNLPPEE----VV 114 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCC----ceeecccC-ccHHHHHHHHHHcCCChhH----EE
Confidence 34556777777766 569999999999999999999 886 55655543 4343 66666665555 99
Q ss_pred EEcCch-hhHHhccccccccCccEEEEe
Q 027798 161 FVEDRL-ATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 161 ~IGDs~-~Di~aA~~~~~~aGi~~i~v~ 187 (218)
||||.. +|+.+| +.+||.+|.|.
T Consensus 115 mVGDqL~TDVlgg----nr~G~~tIlV~ 138 (175)
T COG2179 115 MVGDQLFTDVLGG----NRAGMRTILVE 138 (175)
T ss_pred EEcchhhhhhhcc----cccCcEEEEEE
Confidence 999997 799999 99999999995
No 90
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.82 E-value=3.7e-08 Score=78.50 Aligned_cols=86 Identities=21% Similarity=0.232 Sum_probs=66.3
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-------------C--C-ChHHHHH
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-------------T--G-PKVNVLK 146 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-------------~--~-pKPe~l~ 146 (218)
+...++||+.++|+.+ +.+++|+|++....++..+++ +|+...|...+..+ . + .|+.+++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 4567899999999977 469999999999999999999 99987664432221 1 1 5667777
Q ss_pred HhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 147 QLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
++......++++++||||+.+|+.++
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~ 174 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPML 174 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHH
Confidence 66544444566699999999999998
No 91
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.82 E-value=7e-09 Score=91.46 Aligned_cols=86 Identities=15% Similarity=0.109 Sum_probs=69.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHH---hcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRE---LAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGL 157 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~---~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~ 157 (218)
..+|+|+.++|+.| |+.++|+||++...+...+++ .+++.++|+.+.+... |||+ +++++++.++.
T Consensus 30 ~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~-pk~~~i~~~~~~l~i~~~~--- 105 (320)
T TIGR01686 30 SPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWG-PKSESLRKIAKKLNLGTDS--- 105 (320)
T ss_pred CccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecC-chHHHHHHHHHHhCCCcCc---
Confidence 35799999999988 469999999999999999974 1467788998876633 8998 55666665555
Q ss_pred ceEEEcCchhhHHhccccccccCcc
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
++||||++.|+.++ ++++-.
T Consensus 106 -~vfidD~~~d~~~~----~~~lp~ 125 (320)
T TIGR01686 106 -FLFIDDNPAERANV----KITLPV 125 (320)
T ss_pred -EEEECCCHHHHHHH----HHHCCC
Confidence 99999999999999 886653
No 92
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.81 E-value=9.1e-09 Score=83.99 Aligned_cols=81 Identities=22% Similarity=0.395 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC--CChHH----HHHHhhhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT--GPKVN----VLKQLQKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~--~pKPe----~l~~l~~~~~~~~~e 158 (218)
..++||+.++|+.| |++++|+|+.+...+..+.+. +|| ++.++.++. .|.|. +++.++.+++.
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~---- 197 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGE---- 197 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGG----
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccc---ccccccccccccccchhHHHHHHHHhcCCCE----
Confidence 47899999999988 468999999999999999999 998 444333333 34444 77777766665
Q ss_pred eEEEcCchhhHHhccccccccC
Q 027798 159 LHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aG 180 (218)
|+||||+.+|+.|+ ++||
T Consensus 198 v~~vGDg~nD~~al----~~Ag 215 (215)
T PF00702_consen 198 VAMVGDGVNDAPAL----KAAG 215 (215)
T ss_dssp EEEEESSGGHHHHH----HHSS
T ss_pred EEEEccCHHHHHHH----HhCc
Confidence 99999999999999 9886
No 93
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.79 E-value=4.2e-08 Score=79.71 Aligned_cols=99 Identities=26% Similarity=0.246 Sum_probs=74.1
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---------------HHHHHHHHHhcCCCCCCCeeEeCC----CC-----
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---------------RFVETLLRELAGVTITPDRLYGLG----TG----- 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---------------~~~~~~L~~~~gl~~~fd~i~~~~----~~----- 139 (218)
...+.||+.++|..| +.++.|+||.+. +.....|+. .|. .||.|+-.. ..
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccC
Confidence 357899999999877 579999999654 345555665 565 677776431 11
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
|||.++..+..+...++++.+||||+..|+++| .++|+..+.+..|...
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a----~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAA----ENAGIKGVLVLTGIGV 154 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHH----HHCCCCceEEEcCccc
Confidence 777766666555556777799999999999999 9999998888776554
No 94
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.78 E-value=1.3e-08 Score=100.18 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=89.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.+.|+.| +++++++|+.+...++.++++ +|+..+|. .-.. +|++++++++.+++. ++|||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~----~~~p~~K~~~i~~l~~~~~~----v~~vG 719 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIA----GVLPDGKAEAIKRLQSQGRQ----VAMVG 719 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEe----CCCHHHHHHHHHHHhhcCCE----EEEEe
Confidence 47899999999887 569999999999999999999 99975443 2222 688899999876555 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|+.++ ++||+ ++.||+++...+. .++.++...++.++...+
T Consensus 720 Dg~nD~~al----~~Agv---gia~g~g~~~a~~--~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 720 DGINDAPAL----AQADV---GIAMGGGSDVAIE--TAAITLMRHSLMGVADAL 764 (834)
T ss_pred CCHHHHHHH----HhCCe---eEEecCCCHHHHH--hCCEEEecCCHHHHHHHH
Confidence 999999999 99998 7788877765553 455556666888777654
No 95
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.77 E-value=1.5e-08 Score=94.69 Aligned_cols=85 Identities=24% Similarity=0.368 Sum_probs=66.4
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCch------------HHHHHHHHHhcCCCCCCCeeEeCCCC----ChHHHHHHhhh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQS------------RFVETLLRELAGVTITPDRLYGLGTG----PKVNVLKQLQK 150 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~------------~~~~~~L~~~~gl~~~fd~i~~~~~~----pKPe~l~~l~~ 150 (218)
+||||.+.|+.| |++++|+||++. ..+..+|++ +|+. |+.++|.+.. |+|.++..+..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 799999999998 579999999988 468889999 8884 8888887543 66665544433
Q ss_pred cC----CCCCCceEEEcCchhhHHhccccccccCc
Q 027798 151 KP----EHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 151 ~~----~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
+. ..++++++||||+..|+++| +++|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g----~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANG----KAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHH----HhcCC
Confidence 32 35667799999999999888 77765
No 96
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.67 E-value=2.7e-08 Score=79.59 Aligned_cols=91 Identities=11% Similarity=-0.004 Sum_probs=75.0
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCC-CCCeeEeCCCC--ChHH---HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTI-TPDRLYGLGTG--PKVN---VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~-~fd~i~~~~~~--pKPe---~l~~l~~~~~~~~~e~ 159 (218)
+..-||+.++|+.+. ..++|.|++++.+++.++++ ++... +|+.+++++.. .+|. .+..++..+ +++
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~----~~v 115 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDL----SKV 115 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCCEEeEchhcCCCh----hhE
Confidence 457799999999984 59999999999999999999 99875 99999988765 3444 555666544 449
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
|||||++.|+.++ ..+|+.+....
T Consensus 116 IiVDD~~~~~~~~----~~NgI~i~~f~ 139 (162)
T TIGR02251 116 IIIDNSPYSYSLQ----PDNAIPIKSWF 139 (162)
T ss_pred EEEeCChhhhccC----ccCEeecCCCC
Confidence 9999999999999 99999876554
No 97
>PRK08238 hypothetical protein; Validated
Probab=98.65 E-value=1.5e-07 Score=87.38 Aligned_cols=89 Identities=13% Similarity=0.154 Sum_probs=70.7
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC------ChHHHHHHhhhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG------PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~------pKPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.+.|+++ |.+++|+||+++..++.++++ +|+ ||.++|++.. +|++.+.+.. ..+ +
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l-~~~----~ 141 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALVEAF-GER----G 141 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHHHHh-Ccc----C
Confidence 45789999999987 469999999999999999999 987 8999998753 3455443321 122 3
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
++|+||+.+|+.++ +.+| ..+.|+-+-
T Consensus 142 ~~yvGDS~~Dlp~~----~~A~-~av~Vn~~~ 168 (479)
T PRK08238 142 FDYAGNSAADLPVW----AAAR-RAIVVGASP 168 (479)
T ss_pred eeEecCCHHHHHHH----HhCC-CeEEECCCH
Confidence 89999999999999 9999 777786543
No 98
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.55 E-value=1.8e-07 Score=79.11 Aligned_cols=85 Identities=16% Similarity=0.318 Sum_probs=62.8
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHH--HHHHHhcCCCC-CCCeeEeCCCCChHHHHHHhhhcCCCCCCce
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVE--TLLRELAGVTI-TPDRLYGLGTGPKVNVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~--~~L~~~~gl~~-~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~ 159 (218)
+...+|||+.++|+.| +++++|+||+++.... ..|++ +|+.. +|+.|++++... .+.+.....+...+|+++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 3457899999999988 4699999999988766 78899 99998 999999987531 232322211112234559
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
+||||+..|++..
T Consensus 99 ~~vGd~~~d~~~~ 111 (242)
T TIGR01459 99 YLLGHLENDIINL 111 (242)
T ss_pred EEeCCcccchhhh
Confidence 9999999888765
No 99
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.51 E-value=3.8e-07 Score=90.52 Aligned_cols=116 Identities=17% Similarity=0.238 Sum_probs=87.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe-----------------------CCCC-Ch
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG-----------------------LGTG-PK 141 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~-----------------------~~~~-pK 141 (218)
+++||+.++++.| |+++.++|+.+...+..+.+. +|+...++.+++ +... .|
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 7899999999987 579999999999999999999 999877664432 2221 23
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
-.+++.++...+. +.||||+.+|..|. ++|+ +++.+|++ ..+.....++.++.-.|+..+...+
T Consensus 607 ~~iv~~lq~~g~~----v~mvGDGvND~pAl----~~Ad---VGia~g~~-g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 607 MKIVKALQKRGDV----VAMTGDGVNDAPAL----KLAD---IGVAMGQT-GTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHCCCE----EEEECCCcccHHHH----HhCC---eeEecCCC-cCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 2377888765555 99999999999999 9999 47788864 3344445667444435688877654
No 100
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.47 E-value=7.5e-07 Score=71.82 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=64.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEe-CCchHHHHHHHHHhcCCC----------CCCCeeEeCCCCChHH----HHHH
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVT-SNQSRFVETLLRELAGVT----------ITPDRLYGLGTGPKVN----VLKQ 147 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvT-n~~~~~~~~~L~~~~gl~----------~~fd~i~~~~~~pKPe----~l~~ 147 (218)
+...+||+|.++|+.| |.+++++| +...+.++.+|+. +++. ++|+..--... +|-. +.+.
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~~g-sK~~Hf~~i~~~ 119 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIYPG-SKTTHFRRIHRK 119 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEESSS--HHHHHHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhheecC-chHHHHHHHHHh
Confidence 4568999999999988 56999999 5566799999999 9999 88887543332 5555 4445
Q ss_pred hhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 148 LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
.++++++ ++|++|...+++.. ++.|+.++.|..|-+
T Consensus 120 tgI~y~e----MlFFDDe~~N~~~v----~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 120 TGIPYEE----MLFFDDESRNIEVV----SKLGVTCVLVPDGLT 155 (169)
T ss_dssp H---GGG----EEEEES-HHHHHHH----HTTT-EEEE-SSS--
T ss_pred cCCChhH----EEEecCchhcceee----EecCcEEEEeCCCCC
Confidence 5665555 99999999999999 889999999988754
No 101
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.45 E-value=9.6e-07 Score=86.13 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=85.9
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.+++||+.++|+.| |++++++|+.+...++.+.++ +|+..+++ ... .|++++++++. ++. +.|||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~-----~~p~~K~~~v~~l~~-~~~----v~mvG 635 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG-----LLPEDKVKAVTELNQ-HAP----LAMVG 635 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC-----CCHHHHHHHHHHHhc-CCC----EEEEE
Confidence 47899999999987 579999999999999999999 99963322 222 68889999873 334 99999
Q ss_pred CchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 164 DRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
|+.+|..+. ++|+ +++.+|.++..... .++.++.-.++.+|.+.+
T Consensus 636 DgiNDapAl----~~A~---vgia~g~~~~~a~~--~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 636 DGINDAPAM----KAAS---IGIAMGSGTDVALE--TADAALTHNRLRGLAQMI 680 (741)
T ss_pred CCHHhHHHH----HhCC---eeEEecCCCHHHHH--hCCEEEecCCHHHHHHHH
Confidence 999999999 9999 67778877654433 356666666888877654
No 102
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.32 E-value=3.6e-06 Score=72.57 Aligned_cols=81 Identities=19% Similarity=0.212 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHHHHhcCCCC-CCCeeEeCCCC-ChHHHHHHhhhcCCCCCCc
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLLRELAGVTI-TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L~~~~gl~~-~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+.+ |.+++|+||++. +.+...|++ +|+.. .++.++..+.. +|+...+.+......
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 457999999999977 569999999884 445588888 99975 45778877655 888877777667777
Q ss_pred eEEEcCchhhHHhc
Q 027798 159 LHFVEDRLATLKNV 172 (218)
Q Consensus 159 ~l~IGDs~~Di~aA 172 (218)
++||||+..|+.++
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 99999999999776
No 103
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.28 E-value=1.2e-05 Score=67.00 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=74.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------------ChHHHHHHhhh
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------------PKVNVLKQLQK 150 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------------pKPe~l~~l~~ 150 (218)
..++||+.++++.+ |.+++|+|++....++.+.+. +|++..+...+..+++ .|-+.++++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 78999999998877 579999999999999999999 9998776554432211 35557777666
Q ss_pred cCCCCCCceEEEcCchhhHHhccccccccCccEEE
Q 027798 151 KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
+.+.++++++++|||.+|+-+= +.+|.+.+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml----~~ag~~ia~ 185 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPML----EAAGLPIAV 185 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHH----HhCCCCeEe
Confidence 6666677799999999999999 999987553
No 104
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.22 E-value=3.2e-05 Score=65.52 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=81.1
Q ss_pred hcCCCcccHHHHHHhc-----CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----CC-----C----------
Q 027798 86 GANRLYPGVSDALKLA-----SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P---------- 140 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L-----~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----~~-----p---------- 140 (218)
...++.||+.++++.+ +..+.|+|.+..-+++.+|++ .|+...|+.|++.. .+ |
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 4568999999999988 348999999999999999999 99999999999752 22 1
Q ss_pred ----hHHHHHHhhhcC---CCCCCceEEEcCchhhHHhccccccccCc-cEEEEeCCCCCHHHHHh
Q 027798 141 ----KVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGW-NLYLVDWGYNTPKERAE 198 (218)
Q Consensus 141 ----KPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~~~~~~aGi-~~i~v~~G~~~~~~l~~ 198 (218)
|-.+++++.... +..-++++||||+.+|+=.+ .+.+- +.+...-||.-...+..
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~----~~L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA----LRLRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc----cccCCCCEEecCCCChHHHHHhc
Confidence 222666665431 22235699999999999999 65443 67778888875444433
No 105
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.19 E-value=1.3e-06 Score=77.04 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=43.8
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++++||||++ +||.+| +++||.+++|.+|-.+.++. .....|.+.+.++.|+++.|
T Consensus 263 ~~~~~mIGD~~~tDI~ga----~~~G~~silV~tG~~~~~~~-~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 263 FHALYMVGDNPASDIIGA----QNYGWFSCLVKTGVYNGGDD-LKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred hheEEEEcCChhhhhhhH----HhCCceEEEecccccCCCCC-CCCCCCCEEECCHHHHHHHh
Confidence 46799999998 899999 99999999999994433332 11222457777999999876
No 106
>PRK11590 hypothetical protein; Provisional
Probab=98.16 E-value=3.6e-05 Score=63.79 Aligned_cols=108 Identities=13% Similarity=0.075 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHH-Hhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE
Q 027798 59 SENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDAL-KLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 134 (218)
Q Consensus 59 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L-~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~ 134 (218)
|.+.+++.+....+++.|. ....+|||+.++| +.+ |.+++|+||+++..++.+++. +|+.. .+.++
T Consensus 73 g~~~~~~~~~~~~f~~~~~--------~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i 142 (211)
T PRK11590 73 GHSEARLQALEADFVRWFR--------DNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLP-RVNLI 142 (211)
T ss_pred CCCHHHHHHHHHHHHHHHH--------HhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccc-cCceE
Confidence 5565555555655555442 2256899999999 455 459999999999999999999 88633 44455
Q ss_pred eCC-----CC----------ChHHHHHHh-hhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 135 GLG-----TG----------PKVNVLKQL-QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 135 ~~~-----~~----------pKPe~l~~l-~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
|.+ .+ .|...+++. +. +...+.+-|||.+|+..- ..+|-+.+
T Consensus 143 ~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL----~~a~~~~~ 200 (211)
T PRK11590 143 ASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLL----YFCQHRWR 200 (211)
T ss_pred EEEEEEEEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHH----HhCCCCEE
Confidence 543 11 233344443 32 334589999999999998 88776543
No 107
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.13 E-value=1e-05 Score=62.14 Aligned_cols=115 Identities=15% Similarity=0.269 Sum_probs=85.3
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC-CCCChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL-GTGPKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~-~~~pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
-.+|+.|.+.|++|+ .+++|+|+....++....+. .|+. .+.++.. +...|-++++.|+.+.+. |+||||
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~~k----~vmVGn 101 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRYEK----VVMVGN 101 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCCcE----EEEecC
Confidence 479999999999986 49999999999999999998 8864 3445443 322777799999875555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..+|+.+= ++|.+-.+-+..+.. ++.+ -..++ +.+.+..|+..++
T Consensus 102 GaND~laL----r~ADlGI~tiq~e~v-~~r~-l~~AD--vvik~i~e~ldl~ 146 (152)
T COG4087 102 GANDILAL----READLGICTIQQEGV-PERL-LLTAD--VVLKEIAEILDLL 146 (152)
T ss_pred CcchHHHh----hhcccceEEeccCCc-chHH-Hhhch--hhhhhHHHHHHHh
Confidence 99999999 998886666654322 2222 23445 5566887776654
No 108
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.13 E-value=2.1e-06 Score=74.10 Aligned_cols=66 Identities=23% Similarity=0.313 Sum_probs=50.7
Q ss_pred HHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++..++ +++||||+. +||.+| +++||.++.|..|..+.+++......|.+...++.++...+
T Consensus 199 al~~~~~~~~----~~~mVGD~~~TDI~~a----~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 199 ALEKLGLDRS----EVLMVGDRLDTDILGA----KAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred HHHHhCCCcc----cEEEEcCCchhhHHHH----HHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 5566665544 599999997 699999 99999999999999988776544333445556888887654
No 109
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.12 E-value=2.7e-05 Score=62.68 Aligned_cols=93 Identities=19% Similarity=0.191 Sum_probs=65.1
Q ss_pred CCCcccHHHHHHhcC---C--CEEEEeCCc-------hHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcC-
Q 027798 88 NRLYPGVSDALKLAS---S--RIYIVTSNQ-------SRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKP- 152 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~---~--~l~IvTn~~-------~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~- 152 (218)
..+.|.+.+.+++++ . ++.||||+. ...++.+-+. +|+. .+.-.... +..++++.++...
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCCccHHHHHHHHhhccC
Confidence 456777877777763 2 699999983 6677777777 8853 22222211 2234777776541
Q ss_pred CCCCCceEEEcCch-hhHHhccccccccCccEEEEeCC
Q 027798 153 EHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 153 ~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
..+|++++||||.. +|+.+| ..+|+.+|+|+-|
T Consensus 133 ~~~p~eiavIGDrl~TDVl~g----N~~G~~tilv~~g 166 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMG----NRMGSYTILVTDG 166 (168)
T ss_pred CCCchhEEEEcchHHHHHHHh----hccCceEEEEecC
Confidence 13466699999996 799999 9999999999877
No 110
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.06 E-value=1.6e-05 Score=67.59 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=64.6
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCc-----hHHHHHHHHHhcCCCC---CCCeeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQ-----SRFVETLLRELAGVTI---TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~-----~~~~~~~L~~~~gl~~---~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
.++++.++++.+ +..+.|+|+.+ ....+.+++. +++.. .++.+-....+ .|+.+++.+....+.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 467777776654 34566777654 2344455565 66541 12222111222 788866666555555666
Q ss_pred ceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCce
Q 027798 158 RLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRI 205 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i 205 (218)
++++|||+.+|+.++ +.+|+ +|.+|.+ .++++ ..++.+.
T Consensus 217 e~i~~GD~~NDi~m~----~~ag~---~vamgna-~~~lk-~~Ad~v~ 255 (272)
T PRK10530 217 NVVAFGDNFNDISML----EAAGL---GVAMGNA-DDAVK-ARADLVI 255 (272)
T ss_pred HeEEeCCChhhHHHH----HhcCc---eEEecCc-hHHHH-HhCCEEE
Confidence 799999999999999 99996 5667755 34553 3455433
No 111
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.01 E-value=2.2e-05 Score=78.39 Aligned_cols=115 Identities=17% Similarity=0.194 Sum_probs=81.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC--------CC-------------------eeEeCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT--------PD-------------------RLYGLGT 138 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~--------fd-------------------~i~~~~~ 138 (218)
+++|++.++++.+ |+++.++|+.....+..+.++ .|+... ++ .|++...
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 6899999999987 579999999999999999999 998541 11 1222222
Q ss_pred C-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 139 G-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 139 ~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
. .|-.+++.++...+. +.|+||+.+|+.|. ++|++ ++.+|.++. .....++.++.-.|+..+.+.+
T Consensus 616 P~~K~~iV~~lq~~g~~----va~iGDG~ND~~al----k~AdV---Gia~g~g~~--~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 616 PSHKSELVELLQEQGEI----VAMTGDGVNDAPAL----KKADI---GIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHHhcCCe----EEEecCCcchHHHH----HhCCe---eEECCCCcH--HHHHhcCeEEccCCHHHHHHHH
Confidence 1 333477877755444 99999999999999 99998 566665543 3334566444434477776654
No 112
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.98 E-value=1.7e-05 Score=63.14 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=60.8
Q ss_pred cCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCC-CCC-CeeEeCCCC--ChHHHHHH-hhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVT-ITP-DRLYGLGTG--PKVNVLKQ-LQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~-~~f-d~i~~~~~~--pKPe~l~~-l~~~~~~~~~e~ 159 (218)
.+.++||+.++|+.+. ..++|+||+++.++..+++. ++.. .+| +.|++++.. +...-+.. ++.+. +.+
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~~~d~----~~v 130 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLRLFPADE----SMV 130 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHHHcCCCc----ccE
Confidence 4678999999999984 59999999999999999999 9988 588 778887653 22223422 34333 349
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
++|+|++.-...-
T Consensus 131 vivDd~~~~~~~~ 143 (156)
T TIGR02250 131 VIIDDREDVWPWH 143 (156)
T ss_pred EEEeCCHHHhhcC
Confidence 9999998554444
No 113
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.97 E-value=7.7e-06 Score=69.09 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=48.9
Q ss_pred CEEEEeCCchHHHH-HHHHHhcCCCCCCCeeE---eCCC---C-ChHHHHHHhhhcCCCCCCce-EEEcCch-hhHHhcc
Q 027798 104 RIYIVTSNQSRFVE-TLLRELAGVTITPDRLY---GLGT---G-PKVNVLKQLQKKPEHQGLRL-HFVEDRL-ATLKNVI 173 (218)
Q Consensus 104 ~l~IvTn~~~~~~~-~~L~~~~gl~~~fd~i~---~~~~---~-pKPe~l~~l~~~~~~~~~e~-l~IGDs~-~Di~aA~ 173 (218)
...|+||.+.-... .-... .|+..+|+.+. +... + |+|++++.+..+...+++++ +||||+. +|+.+|
T Consensus 146 ~~~i~tN~d~~~~~~~g~~~-~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A- 223 (236)
T TIGR01460 146 VPFIAANRDDLVRLGDGRFR-PGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGA- 223 (236)
T ss_pred CeEEEECCCCCCCCCCCcEe-ecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHH-
Confidence 46788886631111 11122 34444444332 3332 1 77774444333333344446 9999998 799999
Q ss_pred ccccccCccEEEEeCC
Q 027798 174 KEPELDGWNLYLVDWG 189 (218)
Q Consensus 174 ~~~~~aGi~~i~v~~G 189 (218)
+++|+++++|.||
T Consensus 224 ---~~~G~~~i~v~~G 236 (236)
T TIGR01460 224 ---KNAGFDTLLVLTG 236 (236)
T ss_pred ---HHCCCcEEEEecC
Confidence 9999999999987
No 114
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.91 E-value=1.9e-05 Score=68.50 Aligned_cols=73 Identities=25% Similarity=0.211 Sum_probs=57.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCCHHHHHhh----cCCCceEEechhhHh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNTPKERAEA----ASMPRIQLLQLSDFC 214 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~----~~~~~i~~~~l~el~ 214 (218)
|.+.+++.+..+.+.+|++|+||||+. +||.-| +++|+++++|..|-.+.++.... ...|.+.+..+.++.
T Consensus 225 P~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG----~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~ 300 (306)
T KOG2882|consen 225 PSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFG----KNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLL 300 (306)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcccchhhhhHh----hccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHh
Confidence 444488888888888999999999998 599999 99999999999999988776554 222445555776665
Q ss_pred hh
Q 027798 215 TK 216 (218)
Q Consensus 215 ~~ 216 (218)
+.
T Consensus 301 ~~ 302 (306)
T KOG2882|consen 301 PL 302 (306)
T ss_pred hh
Confidence 54
No 115
>PTZ00445 p36-lilke protein; Provisional
Probab=97.91 E-value=2.7e-05 Score=64.65 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=70.0
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchH---------------HHHHHHHHhcCCCCCCCeeEeCCC------------C
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSR---------------FVETLLRELAGVTITPDRLYGLGT------------G 139 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~---------------~~~~~L~~~~gl~~~fd~i~~~~~------------~ 139 (218)
+-|....+++.+ +++++|||=++.. .++..|++ .+.+-..+.+++.-. +
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 456666676665 6799999977663 57888887 777776777775311 1
Q ss_pred ---ChHHH--H--HHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 ---PKVNV--L--KQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 ---pKPe~--l--~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
|.|++ . +++..+.+.+|+||+||+|+..++++| ++.|+.++.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA----~~lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA----LKEGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH----HHCCCEEEEcC
Confidence 34444 4 666666677777799999999999999 99999999986
No 116
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=97.89 E-value=7.2e-05 Score=60.72 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHh--cCCCCCCCeeEeCCCCChHH------HHHHhhhcCCCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLREL--AGVTITPDRLYGLGTGPKVN------VLKQLQKKPEHQG 156 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~--~gl~~~fd~i~~~~~~pKPe------~l~~l~~~~~~~~ 156 (218)
.++||++.+.|++. +.+++|-|+++....+-...+. ..|..+|+..+....++|-| ++...+.+|.+
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e-- 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE-- 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh--
Confidence 57999999999964 6799999999987766554431 12444444444333334433 78888877777
Q ss_pred CceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 157 LRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
++|+-|.+..+.|| +.+||.++.+..
T Consensus 180 --ilFLSDn~~EL~AA----~~vGl~t~l~~R 205 (229)
T COG4229 180 --ILFLSDNPEELKAA----AGVGLATGLAVR 205 (229)
T ss_pred --eEEecCCHHHHHHH----Hhcchheeeeec
Confidence 99999999999999 999999988754
No 117
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.83 E-value=3.5e-05 Score=61.46 Aligned_cols=88 Identities=24% Similarity=0.241 Sum_probs=55.3
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCch--------------HHHHHHHHHhcCCCCCCCeeEeCCC-C-ChHH--HHHHh
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQS--------------RFVETLLRELAGVTITPDRLYGLGT-G-PKVN--VLKQL 148 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~--------------~~~~~~L~~~~gl~~~fd~i~~~~~-~-pKPe--~l~~l 148 (218)
++|+|.+.|++| +..++|+||.+. ..++.+++. +++. +...++... . .||. +...+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 456899999987 569999999732 345666777 6664 333333332 2 5554 77776
Q ss_pred hhcCC----CCCCceEEEcCc-----------hhhHHhccccccccCccEE
Q 027798 149 QKKPE----HQGLRLHFVEDR-----------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 149 ~~~~~----~~~~e~l~IGDs-----------~~Di~aA~~~~~~aGi~~i 184 (218)
..+.. .+.++++||||+ -.|.+-| .++|+++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA----~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFA----LNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHH----HHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHH----HHcCCccc
Confidence 55443 367789999996 6899999 99999753
No 118
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.82 E-value=0.00026 Score=58.85 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=74.3
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHH-hc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCee
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALK-LA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRL 133 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~-~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i 133 (218)
.|.+.+++.+....+.+.|. ....+|||+.++|+ .+ |.+++||||++...++.+.+. .++..- +.+
T Consensus 71 ~g~~~~~l~~~~~~f~~~~~--------~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~-~~~ 140 (210)
T TIGR01545 71 FGHREAHLQDLEADFVAAFR--------DKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHR-LNL 140 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHH--------HhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-cccccc-CcE
Confidence 36776666666666655542 22468999999995 54 569999999999999999987 776443 334
Q ss_pred EeCC----C-C----------ChHHHHHHh-hhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 134 YGLG----T-G----------PKVNVLKQL-QKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 134 ~~~~----~-~----------pKPe~l~~l-~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+|.+ . + .|...+++. +. +.+.+.+-|||.+|+..- ..+|-+.+
T Consensus 141 i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL----~~a~~~~~ 199 (210)
T TIGR01545 141 IASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLL----AFCEHRWR 199 (210)
T ss_pred EEEEeEEeCCceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHH----HhCCCcEE
Confidence 4442 1 1 233344443 32 333488999999999998 78776543
No 119
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.74 E-value=0.00011 Score=58.81 Aligned_cols=77 Identities=18% Similarity=0.338 Sum_probs=55.6
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC-----C--------C----hHHHHHHh---
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT-----G--------P----KVNVLKQL--- 148 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~-----~--------p----KPe~l~~l--- 148 (218)
|++.++|+.+ +.+++|+|+++...++.+++. +|+...+ +++.+. . . |..+++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 4444999765 679999999999999999998 8986422 232211 0 1 88888888
Q ss_pred hhcCCCCCCceEEEcCchhhHHhc
Q 027798 149 QKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
... ..+...+++|||+.+|+.++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHh
Confidence 221 22334499999999999886
No 120
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.69 E-value=9.3e-06 Score=67.13 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=48.9
Q ss_pred HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++++|++ |+||||..+ |+-+| .+.||..|.|..|--.+.+....++.|....+++.+-+++|
T Consensus 190 al~~~gv~p~~----aVMIGDD~~dDvgGA----q~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I 256 (262)
T KOG3040|consen 190 ALQALGVDPEE----AVMIGDDLNDDVGGA----QACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLI 256 (262)
T ss_pred HHHhcCCChHH----heEEccccccchhhH----hhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHH
Confidence 77777766665 999999986 89999 99999999999986655333334444556666777766554
No 121
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.67 E-value=9.4e-05 Score=61.70 Aligned_cols=103 Identities=25% Similarity=0.361 Sum_probs=75.4
Q ss_pred hcCCCcccHHHHHHhcC---C-CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC-----CC-----C---------hH
Q 027798 86 GANRLYPGVSDALKLAS---S-RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG-----TG-----P---------KV 142 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~-~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~-----~~-----p---------KP 142 (218)
+..+.-||+.++++.+. . .+.|||-.+.-+++..|++ +|+.++|..|++.. .+ | -|
T Consensus 81 r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 81 RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 34678899999999873 3 7889999999999999999 99999999998642 12 1 01
Q ss_pred -H-----HHHHhhh---cCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCC
Q 027798 143 -N-----VLKQLQK---KPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 143 -e-----~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
+ ++.++.. +-+.+-++.+||||+-+|+=.-. +..+.+++...-||.-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l---~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVL---RLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcch---hcccCceecccCCCch
Confidence 1 4444422 22333456999999999997763 5556677777778764
No 122
>PLN02645 phosphoglycolate phosphatase
Probab=97.59 E-value=0.00021 Score=62.83 Aligned_cols=88 Identities=18% Similarity=0.345 Sum_probs=63.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCch---HHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQS---RFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~---~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|+.| |++++++||++. ......|++ +|+...++.|+++.. ..-..++........ .+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~~-~~~~~l~~~~~~~~~----~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSSF-AAAAYLKSINFPKDK----KVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehHH-HHHHHHHhhccCCCC----EEE
Confidence 46899999999877 579999999994 344445577 899888888887753 112234333322222 699
Q ss_pred EcCchhhHHhccccccccCccEEE
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
|+++..+.+.+ +.+|+.++.
T Consensus 117 viG~~~~~~~l----~~~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEEL----ELAGFQYLG 136 (311)
T ss_pred EEcCHHHHHHH----HHCCCEEec
Confidence 99999999999 999998764
No 123
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.55 E-value=0.00013 Score=63.49 Aligned_cols=47 Identities=15% Similarity=0.146 Sum_probs=43.3
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG 139 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~ 139 (218)
||+.++|++| |.+++|+||+++..+...|++ +||..+|+.|+|++..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGHK 198 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCcc
Confidence 9999999988 569999999999999999999 9999999999998754
No 124
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.50 E-value=0.00036 Score=57.77 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=50.9
Q ss_pred CEEE-EeCCchHHHHHHHHHhcCCC----CCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccc
Q 027798 104 RIYI-VTSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPEL 178 (218)
Q Consensus 104 ~l~I-vTn~~~~~~~~~L~~~~gl~----~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~ 178 (218)
.+.+ .+++....+...+++ .++. .+|..|.+.+. .|+.+++.+....+.+++++++|||+.+|+.+- +.
T Consensus 140 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml----~~ 213 (221)
T TIGR02463 140 PLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLL----EV 213 (221)
T ss_pred cEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHH----Hh
Confidence 3444 456666677777877 7765 44544555444 677755555444445566699999999999999 99
Q ss_pred cCccEE
Q 027798 179 DGWNLY 184 (218)
Q Consensus 179 aGi~~i 184 (218)
+|..++
T Consensus 214 ag~~va 219 (221)
T TIGR02463 214 ADYAVV 219 (221)
T ss_pred CCceEE
Confidence 997543
No 125
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0011 Score=54.37 Aligned_cols=83 Identities=19% Similarity=0.400 Sum_probs=63.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC--------CCCe---eEeCC-------CCChHHHH
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI--------TPDR---LYGLG-------TGPKVNVL 145 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~--------~fd~---i~~~~-------~~pKPe~l 145 (218)
...+-||+.++.+.| +.+++++|++-+..+..+-+. +||.. .||. ..|.+ .+.|++++
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 467889999999988 469999999999999999999 99864 1221 12212 12788888
Q ss_pred HHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 146 KQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
+.+.. ..+-+.+.||||..+|++|.
T Consensus 165 ~~lrk--~~~~~~~~mvGDGatDlea~ 189 (227)
T KOG1615|consen 165 ALLRK--NYNYKTIVMVGDGATDLEAM 189 (227)
T ss_pred HHHHh--CCChheeEEecCCccccccC
Confidence 87754 33445699999999999998
No 126
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.46 E-value=0.00085 Score=54.62 Aligned_cols=87 Identities=18% Similarity=0.320 Sum_probs=63.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC-------CCCCeeE----------eC-CC--C-Ch
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT-------ITPDRLY----------GL-GT--G-PK 141 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~-------~~fd~i~----------~~-~~--~-pK 141 (218)
....+-||.+++.+.. +++..|+|++...++..+++. ++=. .+++.++ .- ++ + .|
T Consensus 70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK 148 (220)
T COG4359 70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK 148 (220)
T ss_pred hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCc
Confidence 4467889999888866 469999999999999999998 5522 2222211 11 11 1 56
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
|.++..+...++- ++|+||+..|+.|| +....
T Consensus 149 ~~vI~~l~e~~e~----~fy~GDsvsDlsaa----klsDl 180 (220)
T COG4359 149 SSVIHELSEPNES----IFYCGDSVSDLSAA----KLSDL 180 (220)
T ss_pred chhHHHhhcCCce----EEEecCCcccccHh----hhhhh
Confidence 6688888765554 99999999999999 88765
No 127
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.40 E-value=0.0002 Score=56.74 Aligned_cols=80 Identities=23% Similarity=0.303 Sum_probs=61.7
Q ss_pred HHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccc
Q 027798 95 SDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~ 174 (218)
..+|..++++++|+|+.....++.-.+. +|+..+|. |.. .|-.++..+..+....+++|.||||..+|+-.=
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~q---G~~--dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm-- 115 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQ---GIS--DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVM-- 115 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeee---chH--hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHH--
Confidence 3466678999999999999999999999 99976544 333 355555555444455555599999999999999
Q ss_pred cccccCccEE
Q 027798 175 EPELDGWNLY 184 (218)
Q Consensus 175 ~~~~aGi~~i 184 (218)
++.|+.+.
T Consensus 116 --~~vGls~a 123 (170)
T COG1778 116 --EKVGLSVA 123 (170)
T ss_pred --HHcCCccc
Confidence 99998654
No 128
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.30 E-value=0.00041 Score=64.01 Aligned_cols=89 Identities=15% Similarity=0.218 Sum_probs=59.4
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC--------CCCCCCeeEeCCCC--------------------
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG--------VTITPDRLYGLGTG-------------------- 139 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g--------l~~~fd~i~~~~~~-------------------- 139 (218)
-|.+..+|+.| |.++.++||++-.+++..++.++| +.++||.|++....
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~l 264 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGKL 264 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSSE
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCcc
Confidence 46777777776 569999999999999999998654 45899999864321
Q ss_pred --Ch---H-H------------HHHHhhhcCCCCCCceEEEcCchh-hHHhcccccccc-CccEEEEe
Q 027798 140 --PK---V-N------------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELD-GWNLYLVD 187 (218)
Q Consensus 140 --pK---P-e------------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~a-Gi~~i~v~ 187 (218)
.+ + + ..+.++.+ +.+++||||+.. ||..+ +.. |+.+++|-
T Consensus 265 ~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~----g~~VLY~GDhi~~Di~~~----k~~~gWrT~~Ii 324 (448)
T PF05761_consen 265 KWGKYVGPLEKGKVYSGGNWDQLHKLLGWR----GKEVLYFGDHIYGDILKS----KKRHGWRTAAII 324 (448)
T ss_dssp ECS---SS--TC-EEEE--HHHHHHHCT------GGGEEEEESSTTTTHHHH----HHHH-SEEEEE-
T ss_pred ccccccccccCCCEeecCCHHHHHHHHccC----CCeEEEECCchhhhhhhh----ccccceEEEEEe
Confidence 11 0 0 33334443 456999999985 99988 555 99999995
No 129
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.25 E-value=0.0005 Score=60.04 Aligned_cols=51 Identities=18% Similarity=0.073 Sum_probs=44.9
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChH
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKV 142 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKP 142 (218)
-||+.++|++| |.+++|+||++++.+...|++ +|+..+|+.|+|++.. .|+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g~i~~k~ 204 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGGRKAGEY 204 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECCCccccc
Confidence 38999999988 569999999999999999999 9999999999998765 444
No 130
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.15 E-value=0.0016 Score=62.97 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=78.3
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+.||+.+.++.| |+++.++|+.+...+..+-+. +|+.+ +++.-.. .|-+.+++++.+.+. +.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~----v~a~~~PedK~~~v~~lq~~g~~----VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDD----FIAEATPEDKIALIRQEQAEGKL----VAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCE----EEcCCCHHHHHHHHHHHHHcCCe----EEEECC
Confidence 6789999999887 579999999999999999999 99854 3443322 455588888765555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-+= +.|++- +..|-++... ...++.++.-.|+..+.+.+
T Consensus 517 G~NDapAL----~~AdvG---iAm~~gt~~a--keaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 517 GTNDAPAL----AQADVG---VAMNSGTQAA--KEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred CcchHHHH----HhCCEe---EEeCCCCHHH--HHhCCEEECCCCHHHHHHHH
Confidence 99999999 899863 3333333322 22334333334676665543
No 131
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.13 E-value=0.0014 Score=50.57 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=63.4
Q ss_pred cCCCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhc--CCCCCC
Q 027798 87 ANRLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKK--PEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~--~~~~~~ 157 (218)
.+.+||.|.++|+.++ .-++.+|-+....+-..|+. +++..||+.++.-...-|-- .++.++.+ -..+|.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcc
Confidence 3579999999999884 57888888888889999999 99999999877654322322 44444433 234678
Q ss_pred ceEEEcCchhhHHhc
Q 027798 158 RLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
+++|++|+.-.+..-
T Consensus 118 ~Ivy~DDR~iH~~~I 132 (164)
T COG4996 118 EIVYLDDRRIHFGNI 132 (164)
T ss_pred eEEEEecccccHHHH
Confidence 899999998665555
No 132
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.05 E-value=0.003 Score=61.26 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=78.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.||+.+.+++| |+++.++|+-+...+..+-+. +|+++ +++.-.. .|-+.+++++.+.+. +.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~~G~~----VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQAEGRL----VAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHHcCCe----EEEECC
Confidence 5789999998887 579999999999999999999 99954 4444332 455588888876555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-|= ++|.+ ++.-|-++. .....+|-++.-.|+..+.+.+
T Consensus 516 GvNDAPAL----a~ADV---GIAMgsGTd--vAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 516 GTNDAPAL----AQADV---GVAMNSGTQ--AAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CcchHHHH----HhCCE---eEEeCCCCH--HHHHhCCEEEeCCCHHHHHHHH
Confidence 99999888 88876 333333333 2233444333333677766544
No 133
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.97 E-value=0.0014 Score=54.33 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=51.0
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC---C---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccc
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGL---G---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~---~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~ 176 (218)
.+.+.++...+.+...+++ ++. .+..+.+. + .+ +|+.+++.+......+++++++|||+.+|+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~---- 189 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMF---- 189 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH----
Confidence 3456667777777888887 654 22222221 1 11 688866666555555666799999999999999
Q ss_pred cccCccEEEEe
Q 027798 177 ELDGWNLYLVD 187 (218)
Q Consensus 177 ~~aGi~~i~v~ 187 (218)
+.+|+.+ ++.
T Consensus 190 ~~ag~~v-am~ 199 (230)
T PRK01158 190 EVAGFGV-AVA 199 (230)
T ss_pred HhcCceE-Eec
Confidence 9999854 444
No 134
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.97 E-value=0.0037 Score=60.82 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=79.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+.|+..++++.| |+++.++|+-++..++.+-+. +||+++ ++.-.. .|-+.++++..+.+. +.||||
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v----~AellPedK~~~V~~l~~~g~~----VamVGD 607 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEV----RAELLPEDKAEIVRELQAEGRK----VAMVGD 607 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhh----eccCCcHHHHHHHHHHHhcCCE----EEEEeC
Confidence 6789999998877 579999999999999999999 999544 333222 567799999865445 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||--|= ..|.+ ++.-|-++ +.....+|.++.=.+|..+.+.+
T Consensus 608 GINDAPAL----A~AdV---GiAmG~Gt--DvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 608 GINDAPAL----AAADV---GIAMGSGT--DVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred CchhHHHH----hhcCe---eEeecCCc--HHHHHhCCEEEecCCHHHHHHHH
Confidence 99998876 56654 34344343 34445667555555677776544
No 135
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.95 E-value=0.0016 Score=53.69 Aligned_cols=76 Identities=11% Similarity=0.156 Sum_probs=50.0
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCe--eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccC
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDR--LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~--i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
...++++.....+...++. .++..++.. +.-...+ .|..+++.+....+.+++++++|||+.+|+.+. +.+|
T Consensus 109 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml----~~ag 183 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF----RVVG 183 (215)
T ss_pred EEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH----HhCC
Confidence 4456677777888888887 776543211 1111122 777766555444445556699999999999999 9999
Q ss_pred ccEE
Q 027798 181 WNLY 184 (218)
Q Consensus 181 i~~i 184 (218)
+.++
T Consensus 184 ~~va 187 (215)
T TIGR01487 184 FKVA 187 (215)
T ss_pred CeEE
Confidence 7543
No 136
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.89 E-value=0.0024 Score=54.77 Aligned_cols=73 Identities=18% Similarity=0.110 Sum_probs=48.7
Q ss_pred eCCchHHHHHHHHHhcCCC----CCCCeeEeCCCCChHHHHHHhhhcCCCCC-CceEEEcCchhhHHhccccccccCccE
Q 027798 109 TSNQSRFVETLLRELAGVT----ITPDRLYGLGTGPKVNVLKQLQKKPEHQG-LRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 109 Tn~~~~~~~~~L~~~~gl~----~~fd~i~~~~~~pKPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
|+.....+...++. .++. .+|..|.+.. .|..+++.+....+.++ +++++|||+.+|+.++ +.+|+.+
T Consensus 158 ~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~----~~ag~~v 230 (273)
T PRK00192 158 SEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPML----EAADIAV 230 (273)
T ss_pred chHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHH----HhCCeeE
Confidence 55556666777776 6765 4444555544 56665555544444455 5699999999999999 9999754
Q ss_pred EEEeCC
Q 027798 184 YLVDWG 189 (218)
Q Consensus 184 i~v~~G 189 (218)
+ +..+
T Consensus 231 a-m~NA 235 (273)
T PRK00192 231 V-VPGP 235 (273)
T ss_pred E-eCCC
Confidence 4 4443
No 137
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.89 E-value=0.0045 Score=59.99 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.|++.+.+++| |+++.++|+-+...+..+-+. +|+.+ +++.-.. .|-++++.++.+-+. +.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~----v~A~~~PedK~~iV~~lQ~~G~~----VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDR----FVAECKPEDKINVIREEQAKGHI----VAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCce----EEcCCCHHHHHHHHHHHHhCCCE----EEEECC
Confidence 6889999999887 579999999999999999999 99965 3333221 445588888765555 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..||.-|= ++|.+ ++.-|-++. .....++-+..-.|+..+.+.+
T Consensus 512 GvNDAPAL----a~ADV---GIAMgsGTd--vAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 512 GTNDAPAL----AEANV---GLAMNSGTM--SAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred ChhhHHHH----HhCCE---EEEeCCCCH--HHHHhCCEEEcCCCHHHHHHHH
Confidence 99999888 88876 333343443 2233444333334677666543
No 138
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.85 E-value=0.0056 Score=60.19 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=79.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC---Ce-----------------------eEeCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP---DR-----------------------LYGLGTG 139 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f---d~-----------------------i~~~~~~ 139 (218)
++.|++.++++.+ |+++.++|+.+...+..+-+. +||.... +. +++.-..
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~P 520 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFP 520 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCH
Confidence 6789999998877 679999999999999999999 9996420 00 2332221
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.|-.+++.++.+.+. +.|+||+.||.-|= ++|.+- |++.. ++ +.....++-++.-.|+..+...+
T Consensus 521 e~K~~iV~~lq~~G~~----VamvGDGvNDapAL----~~AdVG-IAm~~--gt--dvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 521 EHKYEIVEILQKRGHL----VGMTGDGVNDAPAL----KKADVG-IAVAG--AT--DAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred HHHHHHHHHHHhcCCE----EEEEcCCcccHHHH----HhCCee-EEecC--Cc--HHHHHhCCEEEEcCChHHHHHHH
Confidence 344488888766555 99999999999988 888873 44432 33 33344566445445676665543
No 139
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.77 E-value=0.007 Score=60.38 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=77.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC----------------------eeEeCCCC-ChH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD----------------------RLYGLGTG-PKV 142 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd----------------------~i~~~~~~-pKP 142 (218)
++.|++.++++.+ |+++.++|+.+...+..+-+. +||..- + .|+++-.. .|-
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 6778999998877 679999999999999999999 999521 1 12322221 333
Q ss_pred HHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 143 NVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
.+.+.++...+. +.|+||+.||.-|= +.|.+- +++.. ++ +.....++-++.-.|+..+...+
T Consensus 593 ~iV~~lq~~G~v----Vam~GDGvNDapAL----k~AdVG-IAmg~--gt--dvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHT----VGFLGDGINDAPAL----RKADVG-ISVDT--AA--DIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCE----EEEECCCcccHHHH----HhCCEE-EEeCC--cc--HHHHHhCCEEEecCChHHHHHHH
Confidence 478887765455 99999999999998 898873 33432 23 33344556444445676665543
No 140
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.73 E-value=0.0065 Score=50.06 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=49.5
Q ss_pred EEEEeCCchHHHHHHHHHhcCCCCCCC-eeEeCC---CC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc
Q 027798 105 IYIVTSNQSRFVETLLRELAGVTITPD-RLYGLG---TG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 105 l~IvTn~~~~~~~~~L~~~~gl~~~fd-~i~~~~---~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a 179 (218)
..+.+....+.+...++. ++....+. ...+.+ .+ +|+.+++.+......+++++++|||+.+|+.+. +.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~----~~a 184 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKE-LGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLF----EVP 184 (225)
T ss_pred EEEeecCCHHHHHHHHHh-cCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHH----Hhc
Confidence 445566666777778887 77531100 000111 12 788866666555555666799999999999999 999
Q ss_pred CccEEEEe
Q 027798 180 GWNLYLVD 187 (218)
Q Consensus 180 Gi~~i~v~ 187 (218)
|+. +++.
T Consensus 185 g~~-vam~ 191 (225)
T TIGR01482 185 GFG-VAVA 191 (225)
T ss_pred Cce-EEcC
Confidence 984 4454
No 141
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.68 E-value=0.0073 Score=60.48 Aligned_cols=114 Identities=16% Similarity=0.107 Sum_probs=77.5
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-------CC--------------eeEeCCCC-ChHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-------PD--------------RLYGLGTG-PKVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-------fd--------------~i~~~~~~-pKPe 143 (218)
++-|++.++++.+ |+++.++|+-+...+..+-+. +||..- ++ .|++.-.. .|-.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 6778999998877 679999999999999999999 999520 00 23332221 3334
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
+.+.++...+. +.|+||..||.-|= ++|.+ .|++. -++ +.....+|-++.-.|+..+.+.
T Consensus 629 IV~~Lq~~G~v----Vam~GDGvNDaPAL----k~ADV-GIAmg--~gt--dvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 629 IVTLLKREGHV----VGFMGDGINDAPAL----RAADI-GISVD--GAV--DIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred HHHHHHHCCCE----EEEECCCcchHHHH----HhCCE-EEEeC--CcC--HHHHHhCCEEEecCChHHHHHH
Confidence 88888765555 99999999999998 88886 33443 233 3334455644444466666554
No 142
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.63 E-value=0.01 Score=50.20 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=37.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
+|..+++.+....+.+++++++|||+.+|+.+. +.++..+++|..+
T Consensus 167 ~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml----~~~~~~~va~~na 212 (249)
T TIGR01485 167 GKGQALQYLLQKLAMEPSQTLVCGDSGNDIELF----EIGSVRGVIVSNA 212 (249)
T ss_pred ChHHHHHHHHHHcCCCccCEEEEECChhHHHHH----HccCCcEEEECCC
Confidence 888877777666666677799999999999999 8878888888643
No 143
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.58 E-value=0.003 Score=51.38 Aligned_cols=105 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred hcCCCcccHHHHHHhcC---CCEEEEeCCchH-------HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCC
Q 027798 86 GANRLYPGVSDALKLAS---SRIYIVTSNQSR-------FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQ 155 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L~---~~l~IvTn~~~~-------~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~ 155 (218)
...+|+||+.|+|++|. ..+.++|+.+.. ....-|++.+|-..+-+.+++.+ |- .+. ..
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---K~------~v~-~D- 138 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---KT------LVG-GD- 138 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---GG------GC---S-
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---CC------eEe-cc-
Confidence 45689999999999983 257777766543 33445555144322334445433 21 111 23
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhh
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~ 216 (218)
++|+|++..+..+ .++|++++.....|+.... ....+.|..|+.+.
T Consensus 139 ----vlIDD~~~n~~~~----~~~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 139 ----VLIDDRPHNLEQF----ANAGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp ----EEEESSSHHHSS-----SSESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred ----EEecCChHHHHhc----cCCCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 8999999999999 9999999999998886432 33556688777554
No 144
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.58 E-value=0.012 Score=59.36 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=78.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC-----------------------eeEeCCCC-Ch
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD-----------------------RLYGLGTG-PK 141 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd-----------------------~i~~~~~~-pK 141 (218)
++.|++.++++.+ |+++.++|+.....+..+-+. .||...-. .|++.-.. .|
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 6778999998877 679999999999999999999 99963211 23333221 33
Q ss_pred HHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC-CCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 142 VNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG-YNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G-~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
-.+++.++...+. +.|+||+.||.-|= ++|.+ ++.-| .++ +.....+|.++.-.++..+.+.+
T Consensus 658 ~~iV~~lq~~g~v----Vam~GDGvNDapAL----k~AdV---GIAmg~~gt--dvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 658 QLLVLMLKDMGEV----VAVTGDGTNDAPAL----KLADV---GFSMGISGT--EVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHHCCCE----EEEECCCCchHHHH----HhCCc---ceecCCCcc--HHHHHhCCEEEecCCHHHHHHHH
Confidence 3488888765555 99999999999998 88876 23334 232 33344556444444677666544
No 145
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.56 E-value=0.0091 Score=59.82 Aligned_cols=115 Identities=16% Similarity=0.121 Sum_probs=78.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC-------CC--------------eeEeCCCC-ChHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT-------PD--------------RLYGLGTG-PKVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~-------fd--------------~i~~~~~~-pKPe 143 (218)
++.|++.++++.+ |+++.++|+-+...+..+-+. +||..- ++ .|++.-.. .|-.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 6778999998877 679999999999999999999 999521 00 23332221 2333
Q ss_pred HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
+++.++..-+. +.|+||..||.-|= ++|.+ .|++.. ++ +.....+|-++.-.|+..+.+.+
T Consensus 629 iV~~Lq~~G~v----VamtGDGvNDaPAL----k~ADV-GIAmg~--gt--dvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 629 VLKALQANGHT----VGFLGDGINDAPAL----RDADV-GISVDS--GA--DIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHhCCCE----EEEECCCchhHHHH----HhCCE-EEEeCc--cc--HHHHHhcCEEEecCChHHHHHHH
Confidence 88888765555 99999999999988 88887 344432 33 33344556444444677666543
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.40 E-value=0.0051 Score=52.06 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=45.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc-------CccEEEEeCCCCCHHHHHhhcCCCceEEechhh
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD-------GWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a-------Gi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e 212 (218)
.|..+++.+......++.+++||||+.+|+.++ +.+ |..++.|.+|-. ...++ +.+.+..+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~----~~~~~~~~~~g~~~v~v~~g~~------~~~A~--~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAF----RVVNNQWGNYGFYPVPIGSGSK------KTVAK--FHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHH----HHHhcccCCCCeEEEEEecCCc------CCCce--EeCCCHHH
Confidence 456666666555555566699999999999999 888 677777875521 12344 45557777
Q ss_pred Hhhhc
Q 027798 213 FCTKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
+...|
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 76654
No 147
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.34 E-value=0.027 Score=47.09 Aligned_cols=43 Identities=12% Similarity=-0.139 Sum_probs=33.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
+|+.+++.+......+++++++|||+.+|+.+. +.+|. ++++.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml----~~~~~-~iav~ 201 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEML----RGLTL-GVVVG 201 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHH----cCCCc-EEEEc
Confidence 888877777666666667799999999999999 88875 33443
No 148
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.23 E-value=0.021 Score=58.16 Aligned_cols=116 Identities=11% Similarity=0.157 Sum_probs=77.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC----------Ce-----------------------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP----------DR----------------------- 132 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f----------d~----------------------- 132 (218)
++.|++.++++.+ |+++.++|+.....+..+-+. .||.... ..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 6788999999877 679999999999999999999 9995321 11
Q ss_pred eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechh
Q 027798 133 LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLS 211 (218)
Q Consensus 133 i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~ 211 (218)
|+++-.. .|-++++.++...+. +.|+||+.||.-|= +.|++- +.-|.+.. +.....++.++.-.|+.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~----Vam~GDGvNDapaL----k~AdVG---IAmg~~gt-~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAF----CAMTGDGVNDSPSL----KMANVG---IAMGINGS-DVAKDASDIVLSDDNFA 792 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCe----eEEeCCCcchHHHH----HhCCcc---EecCCCcc-HHHHHhcCEEEecCCHH
Confidence 2222211 233477877765555 99999999999998 888863 33332212 23334555444434576
Q ss_pred hHhhhc
Q 027798 212 DFCTKL 217 (218)
Q Consensus 212 el~~~~ 217 (218)
.+...+
T Consensus 793 ~I~~~i 798 (1053)
T TIGR01523 793 SILNAI 798 (1053)
T ss_pred HHHHHH
Confidence 665543
No 149
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.92 E-value=0.068 Score=45.19 Aligned_cols=81 Identities=20% Similarity=0.159 Sum_probs=59.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeCC--CCC------hHHHHHHhh-h
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLG--TGP------KVNVLKQLQ-K 150 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~~--~~p------KPe~l~~l~-~ 150 (218)
...++.|++.++++.+ |.++.++|+.+... +..-|.+ .|+..+ +.++-.. +.. |-+..+++. .
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence 3467999999999876 57999999999766 6777777 887765 6665443 222 444444544 3
Q ss_pred cCCCCCCceEEEcCchhhHHhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.... +..|||...|+.++
T Consensus 195 GYrI----v~~iGDq~sDl~G~ 212 (229)
T TIGR01675 195 GYRI----WGNIGDQWSDLLGS 212 (229)
T ss_pred CceE----EEEECCChHHhcCC
Confidence 4666 88999999999877
No 150
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.84 E-value=0.041 Score=55.79 Aligned_cols=115 Identities=11% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC------------------------Ce---------
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP------------------------DR--------- 132 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f------------------------d~--------- 132 (218)
++.|++.++++.+ |+++.++|+.+...+..+.+. +|+...- ..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 6778999998876 679999999999999999999 9984210 01
Q ss_pred ----------------eEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 133 ----------------LYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 133 ----------------i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
|+++-.. .|-.+.+.++...+. +.|+||+.+|.-|= +.|.+- +.-|.... +
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~v----v~~~GDG~ND~paL----k~AdVG---iamg~~G~-~ 714 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAI----VAVTGDGVNDSPAL----KKADIG---VAMGIAGS-D 714 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCE----EEEECCCcccHHHH----hhCCcc---eecCCccc-H
Confidence 2222211 222267777655455 99999999999998 888863 33342212 2
Q ss_pred HHhhcCCCceEEechhhHhhh
Q 027798 196 RAEAASMPRIQLLQLSDFCTK 216 (218)
Q Consensus 196 l~~~~~~~~i~~~~l~el~~~ 216 (218)
.....++.++.-.|+..+.+.
T Consensus 715 vak~aADivL~dd~f~~Iv~a 735 (997)
T TIGR01106 715 VSKQAADMILLDDNFASIVTG 735 (997)
T ss_pred HHHHhhceEEecCCHHHHHHH
Confidence 223345544443356666554
No 151
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.45 E-value=0.013 Score=47.68 Aligned_cols=41 Identities=17% Similarity=0.089 Sum_probs=32.6
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+|+.+++.+......+++++++|||+.+|+.++ +.+|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~----~~~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMF----EVAGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH----HHcCCceE
Confidence 788877666555555666799999999999999 99988653
No 152
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.43 E-value=0.076 Score=52.52 Aligned_cols=109 Identities=16% Similarity=0.173 Sum_probs=73.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVED 164 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
++.|++..++..| |++++++|+.+...++.+-+. .| ++.|++--.. .|-+.++++..+..- +.||||
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~~~----VaMVGD 793 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNGGP----VAMVGD 793 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcCCc----EEEEeC
Confidence 5667777665554 789999999999999999998 88 6777776443 677799999876655 999999
Q ss_pred chhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhh
Q 027798 165 RLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCT 215 (218)
Q Consensus 165 s~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~ 215 (218)
..||--|= ..|.+ ++.-|-++ +..-..+|.+..-.||.++..
T Consensus 794 GINDaPAL----A~AdV---GIaig~gs--~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 794 GINDAPAL----AQADV---GIAIGAGS--DVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred CCCccHHH----Hhhcc---ceeecccc--HHHHhhCCEEEEccchhhhHH
Confidence 99986654 33333 22223333 233334553333335655543
No 153
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.33 E-value=0.39 Score=41.00 Aligned_cols=145 Identities=17% Similarity=0.153 Sum_probs=76.1
Q ss_pred HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHH
Q 027798 44 LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLL 120 (218)
Q Consensus 44 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L 120 (218)
+..|......++.+.+++.+++.+.... ....+.+|+.++++.| ++++.|.|.+-.+.++.+|
T Consensus 59 M~EWw~kah~llv~~~l~k~~i~~~V~~--------------s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL 124 (246)
T PF05822_consen 59 MEEWWTKAHELLVEQGLTKSEIEEAVKE--------------SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL 124 (246)
T ss_dssp HHHHHHHHHHHHHHHT-BGGGHHHHHHC--------------S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcCHHHHHHHHHh--------------cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH
Confidence 3444444555555555555444433332 2356889999998887 4699999999999999999
Q ss_pred HHhcCCCCCCCeeEeC-----CCC-------------ChHH-HHHHhh-hcCCCCCCceEEEcCchhhHHhcccccccc-
Q 027798 121 RELAGVTITPDRLYGL-----GTG-------------PKVN-VLKQLQ-KKPEHQGLRLHFVEDRLATLKNVIKEPELD- 179 (218)
Q Consensus 121 ~~~~gl~~~fd~i~~~-----~~~-------------pKPe-~l~~l~-~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a- 179 (218)
++ .|....==.|++. +.+ .|-+ ++.... .+.-..+..++..||+..|+.+| ...
T Consensus 125 ~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma----~G~~ 199 (246)
T PF05822_consen 125 RQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMA----DGVP 199 (246)
T ss_dssp HH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTT----TT-S
T ss_pred HH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhh----cCCC
Confidence 99 7643110112321 111 3444 442100 01112344599999999999999 544
Q ss_pred Ccc---EEEEeCCCCCHHH-HHhhcCCCceEEec
Q 027798 180 GWN---LYLVDWGYNTPKE-RAEAASMPRIQLLQ 209 (218)
Q Consensus 180 Gi~---~i~v~~G~~~~~~-l~~~~~~~~i~~~~ 209 (218)
... .||... ...++ +......+.|.+.+
T Consensus 200 ~~~~~lkIGFLn--~~ve~~l~~Y~~~yDIVlv~ 231 (246)
T PF05822_consen 200 DEENVLKIGFLN--DKVEENLEKYLEAYDIVLVD 231 (246)
T ss_dssp --SEEEEEEEE---SSHHHHHHHHHCCSSEEEET
T ss_pred ccccEEEEEecc--cCHHHHHHHHHhcCCEEEEC
Confidence 222 233332 23343 66666667776654
No 154
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.32 E-value=0.074 Score=49.66 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEc
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVE 163 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+.|++.++++.| +.++.++|+.+...+..+-+. +|+ ++.-.. .|-+.++++...... +.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~g~~----v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKKGRV----VAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHCCCE----EEEEC
Confidence 36889999998877 568999999999999999998 886 232221 455577777654444 99999
Q ss_pred CchhhHHhccccccccCc
Q 027798 164 DRLATLKNVIKEPELDGW 181 (218)
Q Consensus 164 Ds~~Di~aA~~~~~~aGi 181 (218)
|..+|.-+- +.|++
T Consensus 414 Dg~nD~~al----~~Adv 427 (499)
T TIGR01494 414 DGVNDAPAL----KKADV 427 (499)
T ss_pred CChhhHHHH----HhCCC
Confidence 999999888 77775
No 155
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.29 E-value=0.025 Score=41.46 Aligned_cols=72 Identities=21% Similarity=0.354 Sum_probs=43.0
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceE
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.++|+.| ++++.++||++.. .....|+. +|+.--.+.|+++.. .+...+... ....+++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts~~----~~~~~l~~~--~~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITSGM----AAAEYLKEH--KGGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEHHH----HHHHHHHHH--TTSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEChHH----HHHHHHHhc--CCCCEEE
Confidence 346899999999988 5799999999854 34455577 888765566665532 122222221 1234488
Q ss_pred EEcCc
Q 027798 161 FVEDR 165 (218)
Q Consensus 161 ~IGDs 165 (218)
+||-.
T Consensus 85 vlG~~ 89 (101)
T PF13344_consen 85 VLGSD 89 (101)
T ss_dssp EES-H
T ss_pred EEcCH
Confidence 88865
No 156
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.27 E-value=0.12 Score=44.11 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=57.5
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHH----HHHHHHHhcCCCCCCC-eeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRF----VETLLRELAGVTITPD-RLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~----~~~~L~~~~gl~~~fd-~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
...+.||+.|+|+.. |..++-+||...+. +..-|.. .|+..--+ .++--.+. +|..-.+........
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~i--- 195 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYKI--- 195 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccce---
Confidence 357899999999987 56999999998875 4556666 78764332 23333333 666555555556677
Q ss_pred ceEEEcCchhhHHhc
Q 027798 158 RLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
+++|||+..|....
T Consensus 196 -Vm~vGDNl~DF~d~ 209 (274)
T COG2503 196 -VMLVGDNLDDFGDN 209 (274)
T ss_pred -eeEecCchhhhcch
Confidence 99999999988766
No 157
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.13 E-value=0.062 Score=46.33 Aligned_cols=72 Identities=15% Similarity=0.247 Sum_probs=46.0
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCc---hHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQ---SRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~---~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|++| +.+++++||++ +......|+. +|+....+.|+++.. ++..+..+....+.++++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts~~-----~~~~~l~~~~~~~~~v~~ 90 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSSAL-----CAARLLRQPPDAPKAVYV 90 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecHHH-----HHHHHHHhhCcCCCEEEE
Confidence 46899999999987 56999999966 3344456777 888655565655432 222222221112345999
Q ss_pred EcCc
Q 027798 162 VEDR 165 (218)
Q Consensus 162 IGDs 165 (218)
||+.
T Consensus 91 iG~~ 94 (279)
T TIGR01452 91 IGEE 94 (279)
T ss_pred EcCH
Confidence 9986
No 158
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=94.80 E-value=0.15 Score=43.11 Aligned_cols=94 Identities=19% Similarity=0.204 Sum_probs=69.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC-------CCCCCCeeEeCCCC--ChHHHHHHhhhcCCC
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG-------VTITPDRLYGLGTG--PKVNVLKQLQKKPEH 154 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g-------l~~~fd~i~~~~~~--pKPe~l~~l~~~~~~ 154 (218)
....|++|...++.. +.+++|.|+.+....+.+..+ .+ +..|||.-+|.-.. .--.+...++.++.+
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhh
Confidence 347999999999965 569999999998777665543 32 24566665554321 222377778877766
Q ss_pred CCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 155 QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.+|.-|-..-..+| +.+|+.+..+...
T Consensus 200 ----iLfLTd~~~Ea~aa----~~aGl~a~l~~rP 226 (254)
T KOG2630|consen 200 ----ILFLTDVPREAAAA----RKAGLQAGLVSRP 226 (254)
T ss_pred ----eEEeccChHHHHHH----HhcccceeeeecC
Confidence 99999999999999 9999988777543
No 159
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.61 E-value=0.021 Score=44.81 Aligned_cols=80 Identities=19% Similarity=0.129 Sum_probs=54.8
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCCCeeEeCCCC---ChH--HHHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG---PKV--NVLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~fd~i~~~~~~---pKP--e~l~~l~~~~~~~~~e~ 159 (218)
..+.||+.++|+.+. ..++|.|++++.+++.+++. +.- ..+|+.+++.+.. .+. .-+..++. +.+.+
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~----~~~~v 109 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGR----DLDNV 109 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-----GGGE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhccccccccccccccccccccccchHHHhh----ccccE
Confidence 357899999999884 69999999999999999999 776 5789999887643 111 12333332 34559
Q ss_pred EEEcCchhhHHhc
Q 027798 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
|+|+|++.-...-
T Consensus 110 vivDD~~~~~~~~ 122 (159)
T PF03031_consen 110 VIVDDSPRKWALQ 122 (159)
T ss_dssp EEEES-GGGGTTS
T ss_pred EEEeCCHHHeecc
Confidence 9999999855443
No 160
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=94.61 E-value=0.13 Score=41.96 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=61.7
Q ss_pred hhhcCCCcccHHHHHHh---cCCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeCCCCChHH--HHHHhhhcCCCC
Q 027798 84 WIGANRLYPGVSDALKL---ASSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGLGTGPKVN--VLKQLQKKPEHQ 155 (218)
Q Consensus 84 ~~~~~~l~~gv~e~L~~---L~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~~~~pKPe--~l~~l~~~~~~~ 155 (218)
|....-|-+-+.+++.. -|..++.+|+.++.. +...|.+-|.|...--.++..+. |||. --.....+...
T Consensus 109 ~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk-~k~~qy~Kt~~i~~~~~- 186 (237)
T COG3700 109 WDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK-PKPGQYTKTQWIQDKNI- 186 (237)
T ss_pred CccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC-CCcccccccHHHHhcCc-
Confidence 44444455555666552 245899999887753 33444332677666565665554 5665 11111222334
Q ss_pred CCceEEEcCchhhHHhccccccccCccEEEEeCCCC
Q 027798 156 GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
-++-|||-+||.|| +.+|++.|-+....+
T Consensus 187 ---~IhYGDSD~Di~AA----keaG~RgIRilRAaN 215 (237)
T COG3700 187 ---RIHYGDSDNDITAA----KEAGARGIRILRAAN 215 (237)
T ss_pred ---eEEecCCchhhhHH----HhcCccceeEEecCC
Confidence 69999999999999 999999987765433
No 161
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.08 E-value=0.13 Score=43.36 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=31.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
.|-.+++.+....+.+++++++|||+.+|+.+. +.+|+.+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~----~~~~~~~ 227 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEML----EAAGYGV 227 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHH----HhCCcee
Confidence 677666666555555666799999999999999 9999853
No 162
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.04 E-value=0.11 Score=45.07 Aligned_cols=52 Identities=35% Similarity=0.532 Sum_probs=37.1
Q ss_pred hcCCCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeCC
Q 027798 86 GANRLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~~ 137 (218)
+-..++||+.++|+.| +.++.++||+++..-+ ..|+...+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 3457999999999977 5799999999876444 33333145556677777664
No 163
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.79 E-value=0.078 Score=44.40 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=31.3
Q ss_pred ChHHHHHHhhhcCCC--CCCceEEEcCchhhHHhccccccccCccEE
Q 027798 140 PKVNVLKQLQKKPEH--QGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pKPe~l~~l~~~~~~--~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
.|+.+++.+....+. +++++++|||+.+|+.+- +.+|+.++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml----~~ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMF----EVVDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHH----HhCCCcEe
Confidence 788866666443332 455699999999999999 99998654
No 164
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.78 E-value=0.9 Score=38.61 Aligned_cols=38 Identities=13% Similarity=0.374 Sum_probs=33.5
Q ss_pred CCCcccHHHHHHhcCC--CEEEEeCCchHHHHHHHHHhcCC
Q 027798 88 NRLYPGVSDALKLASS--RIYIVTSNQSRFVETLLRELAGV 126 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~~--~l~IvTn~~~~~~~~~L~~~~gl 126 (218)
.++-||+.++++.|+. .-+|+|++-++++.++... .|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCC
Confidence 5789999999999986 6689999999999999888 887
No 165
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.39 E-value=0.062 Score=45.32 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=56.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeE-eC-CCC-------ChHHHHHHhhhc-
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLY-GL-GTG-------PKVNVLKQLQKK- 151 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~-~~-~~~-------pKPe~l~~l~~~- 151 (218)
..+.||+.++++.+ |..++++||.+.. .+..-|.+ .|.... +.++ -. ... -|.+..+.+..+
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGW-DHLILRPDKDPSKKSAVEYKSERRKEIEKKG 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTB-SCGEEEEESSTSS------SHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCcc-chhccccccccccccccccchHHHHHHHHcC
Confidence 37899999999876 6799999988764 55666777 896543 4443 22 221 255556666555
Q ss_pred CCCCCCceEEEcCchhhHHhc
Q 027798 152 PEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 152 ~~~~~~e~l~IGDs~~Di~aA 172 (218)
... +.+|||...|+.++
T Consensus 192 y~I----i~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 192 YRI----IANIGDQLSDFSGA 208 (229)
T ss_dssp EEE----EEEEESSGGGCHCT
T ss_pred CcE----EEEeCCCHHHhhcc
Confidence 677 99999999999995
No 166
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.37 E-value=0.18 Score=42.60 Aligned_cols=45 Identities=13% Similarity=0.076 Sum_probs=30.8
Q ss_pred ChHHHHHHhhhcCCCC--CCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 140 PKVNVLKQLQKKPEHQ--GLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~--~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.|..+++.+....+.+ ++++++|||+.+|+.+. +.+|..+ ++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml----~~ag~~v-am~Na 222 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLL----EVVDLAV-VVPGP 222 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHH----HHCCEEE-EeCCC
Confidence 6766444443333333 56699999999999999 9999754 44433
No 167
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.15 E-value=0.59 Score=47.15 Aligned_cols=87 Identities=10% Similarity=0.209 Sum_probs=66.3
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEe-CCCC-------------------ChH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYG-LGTG-------------------PKV 142 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~-~~~~-------------------pKP 142 (218)
.+|-+++.++++.+ |+++-++|+-....+..+-+. .|+..--+ .++. .+-. -.|
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 47889999999877 679999999999999999999 99865442 2433 2211 224
Q ss_pred H----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 143 N----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 143 e----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+ +.+.++..-+. +.|+||..||.-|= |+|.+=+
T Consensus 625 ~qK~~IV~~lq~~g~v----VamtGDGvNDapAL----k~ADVGI 661 (917)
T COG0474 625 EQKARIVEALQKSGHV----VAMTGDGVNDAPAL----KAADVGI 661 (917)
T ss_pred HHHHHHHHHHHhCCCE----EEEeCCCchhHHHH----HhcCccE
Confidence 3 77777766555 99999999999998 8988743
No 168
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=93.13 E-value=0.47 Score=48.52 Aligned_cols=38 Identities=16% Similarity=0.333 Sum_probs=31.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
++-|||.++++.| |+++-++|+-..+.+..+-.. .|+-
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 6889999999887 679999999998888888777 7763
No 169
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=93.05 E-value=0.19 Score=45.01 Aligned_cols=91 Identities=20% Similarity=0.301 Sum_probs=58.0
Q ss_pred ccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcC--CCCCCCeeEeCCCC-------ChHH----------------
Q 027798 92 PGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGTG-------PKVN---------------- 143 (218)
Q Consensus 92 ~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~g--l~~~fd~i~~~~~~-------pKPe---------------- 143 (218)
|....+|+.| |.++.++||++..+++.-++.+.| +.++||.|+..... .+|=
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 3444455555 679999999999999888776333 56899998753211 2221
Q ss_pred -----------HHHHhhhcCCCCCCceEEEcCchh-hHHhcccccc-ccCccEEEE
Q 027798 144 -----------VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPE-LDGWNLYLV 186 (218)
Q Consensus 144 -----------~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~-~aGi~~i~v 186 (218)
.+..+..-.+=.+.+++|+||.+. |+..- . ++|+.+-++
T Consensus 323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~----tlkhgWRTgAI 374 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL----TLKHGWRTGAI 374 (510)
T ss_pred hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh----Hhhcccccccc
Confidence 222222212234566999999985 77665 4 778776554
No 170
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=92.97 E-value=0.13 Score=43.62 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=33.8
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.+|+.+- +.+|. ++++.
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml----~~ag~-~vAm~ 238 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMI----EYAGV-GVAMG 238 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH----HhCCc-eEEec
Confidence 677777776655566667799999999999999 99998 44444
No 171
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=92.82 E-value=0.48 Score=48.51 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=34.5
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
.++.|++.++++.| |+++.++|+.+...+..+-+. .||.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 36889999999877 579999999999999999999 9984
No 172
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=92.51 E-value=0.57 Score=37.82 Aligned_cols=91 Identities=20% Similarity=0.171 Sum_probs=65.1
Q ss_pred CcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCch
Q 027798 90 LYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRL 166 (218)
Q Consensus 90 l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+-.+|...|..++ .+++-+|..-....+..=.- +.+ ...+|.+.-.+...|.++++.+++ -+|++|+.
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h~KV~~vrth~i--------dlf~ed~~ 143 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLHHKVEAVRTHNI--------DLFFEDSH 143 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhcccccchhhHhhcc--------CccccccC
Confidence 4467888888875 48888888877766544333 322 345666543332267788888876 48999996
Q ss_pred -hhHHhccccccccCccEEEEeCCCCCH
Q 027798 167 -ATLKNVIKEPELDGWNLYLVDWGYNTP 193 (218)
Q Consensus 167 -~Di~aA~~~~~~aGi~~i~v~~G~~~~ 193 (218)
+-++.| +++|++++.+...|+..
T Consensus 144 ~na~~iA----k~~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIA----KNAGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHH----HhcCCcEEEecCccccc
Confidence 678888 99999999999988864
No 173
>PRK10976 putative hydrolase; Provisional
Probab=92.35 E-value=0.1 Score=44.19 Aligned_cols=43 Identities=14% Similarity=0.095 Sum_probs=33.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.||+.+- +.+|.. +++.
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml----~~ag~~-vAm~ 232 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEML----SMAGKG-CIMG 232 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHH----HHcCCC-eeec
Confidence 677777776655566667799999999999999 999984 4454
No 174
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=92.05 E-value=0.65 Score=39.71 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=56.8
Q ss_pred EEEEeCCchH-HHHHHHHHhcCCCCCCC--eeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 105 IYIVTSNQSR-FVETLLRELAGVTITPD--RLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 105 l~IvTn~~~~-~~~~~L~~~~gl~~~fd--~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
-++||+.+-- .+-++|= +||..+|. -||++....|..+.+.+..+.+.+...-++|||+..-=+|| +..++
T Consensus 178 NvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aA----k~l~w 251 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAA----QAMNW 251 (274)
T ss_pred EEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHH----HhcCC
Confidence 4567766644 3333433 78888884 47877655888877776655554445689999999999999 99999
Q ss_pred cEEEEeCC
Q 027798 182 NLYLVDWG 189 (218)
Q Consensus 182 ~~i~v~~G 189 (218)
+++-+...
T Consensus 252 PFw~I~~h 259 (274)
T TIGR01658 252 PFVKIDLH 259 (274)
T ss_pred CeEEeecC
Confidence 99888643
No 175
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=91.45 E-value=1.7 Score=34.35 Aligned_cols=90 Identities=12% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhc---CCCCCCCeeEeCCC----------C-C-----hHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELA---GVTITPDRLYGLGT----------G-P-----KVN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~---gl~~~fd~i~~~~~----------~-p-----KPe 143 (218)
...|++.++++++ |+++.++|+.+..... ..|+. + |..-....++++.. . . |.+
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 4679999999877 5799999999987764 55554 2 22112234554322 1 2 334
Q ss_pred HHHHhhhcCC-CCCCceEEEcCchhhHHhccccccccCccE
Q 027798 144 VLKQLQKKPE-HQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 144 ~l~~l~~~~~-~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
.++.+..-.. ..-.=+.-+||+.+|+++= +++|++.
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y----~~~gi~~ 142 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISY----SAVGIPP 142 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHH----HHcCCCh
Confidence 5665543211 1111134588999999999 9999954
No 176
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.26 E-value=1.4 Score=37.73 Aligned_cols=100 Identities=18% Similarity=0.233 Sum_probs=61.1
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHH---HHHHhcCCC--CC-C--CeeE-----eC--C------CC------
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVET---LLRELAGVT--IT-P--DRLY-----GL--G------TG------ 139 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~---~L~~~~gl~--~~-f--d~i~-----~~--~------~~------ 139 (218)
.=+++.++++.| ++++..+|..+...... .|+. +||+ .. | +..+ .. . .|
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 335666666665 57899999888765544 4455 6663 11 0 0000 00 0 01
Q ss_pred -ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCC
Q 027798 140 -PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 140 -pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~ 190 (218)
+|-++|..+...-...|+.+|||+|+...+.+..+..++.||.+++..|..
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 566666665555555666699999998766543333378999999998754
No 177
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=90.71 E-value=1.1 Score=44.40 Aligned_cols=85 Identities=19% Similarity=0.294 Sum_probs=65.8
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCC----eeEeC-CCC--C-----------------
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPD----RLYGL-GTG--P----------------- 140 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd----~i~~~-~~~--p----------------- 140 (218)
-+|.++|.+.++.+ |+++.++|+.+.+.++.+-+. .|+...-+ ..++. +.. +
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 37889999998876 689999999999999999999 99866555 22322 211 1
Q ss_pred ----hHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCc
Q 027798 141 ----KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 141 ----KPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi 181 (218)
|-.+.+.|+...+. +-|-||..||--|= |.|.+
T Consensus 662 ~P~HK~kIVeaLq~~gei----vAMTGDGVNDApAL----K~AdI 698 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEV----VAMTGDGVNDAPAL----KKADI 698 (972)
T ss_pred CchhHHHHHHHHHhcCCE----EEecCCCccchhhh----hhccc
Confidence 22277888877777 99999999999888 88876
No 178
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.34 E-value=0.55 Score=39.81 Aligned_cols=49 Identities=12% Similarity=0.154 Sum_probs=39.6
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeC---CchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTS---NQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn---~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
..++|++.++|++| |.+++++|| .+...+...|+. +|+....+.|+++.
T Consensus 16 ~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~-~g~~~~~~~iit~~ 70 (249)
T TIGR01457 16 KERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS-FDIPATLETVFTAS 70 (249)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEeeHH
Confidence 45789999999877 579999998 446777888888 99988778887753
No 179
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=90.12 E-value=0.27 Score=40.23 Aligned_cols=43 Identities=16% Similarity=0.143 Sum_probs=30.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+....+.+++++++|||+.+|+.+- +.+|.. +++.
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml----~~~~~~-~am~ 228 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEML----ELAGYS-VAMG 228 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHH----HHSSEE-EEET
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHH----hhcCeE-EEEc
Confidence 666655555444444555599999999999999 999874 4444
No 180
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=89.54 E-value=0.3 Score=41.60 Aligned_cols=43 Identities=12% Similarity=0.005 Sum_probs=33.4
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+....+.++++++.|||+.||+.+= +.+|. ++++.
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml----~~ag~-~vAm~ 230 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREML----GSVGR-GFIMG 230 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHH----HHcCC-ceecc
Confidence 677777776655566666799999999999999 99997 45554
No 181
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.06 E-value=0.41 Score=40.82 Aligned_cols=46 Identities=24% Similarity=0.369 Sum_probs=35.7
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHH---HHHHHHHhcCCCCCCCeeEeC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRF---VETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~---~~~~L~~~~gl~~~fd~i~~~ 136 (218)
++||+.++|+.| |++++++||++... ....|+. +|+.--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 899999999987 57999999977664 6667777 8886555666654
No 182
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.00 E-value=0.41 Score=40.93 Aligned_cols=43 Identities=9% Similarity=-0.042 Sum_probs=30.6
Q ss_pred ChHHHHHHhhhcCCC---CCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEH---QGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~---~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+...... ++++++.|||+.||+.+= +.+|. ++++.
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml----~~ag~-gvAM~ 232 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLL----DVMDY-AVVVK 232 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHH----HhCCE-EEEec
Confidence 676655555443344 455599999999999999 99997 44454
No 183
>PLN02382 probable sucrose-phosphatase
Probab=88.72 E-value=0.66 Score=42.55 Aligned_cols=45 Identities=16% Similarity=-0.030 Sum_probs=35.4
Q ss_pred ChHHHHHHhhhcC---CCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKP---EHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+.... +.++++++.+||+.||+++= +.+|+.+|++..
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl----~~ag~~gvam~N 222 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELF----SVPDVYGVMVSN 222 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHH----hcCCCCEEEEcC
Confidence 6777777765554 55667799999999999999 889977777754
No 184
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.46 E-value=0.38 Score=38.28 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=29.3
Q ss_pred CCCceEEEcCch-hhHHhccccccccCccEEEEeCCCCC
Q 027798 155 QGLRLHFVEDRL-ATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 155 ~~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
.++|.+||||++ +||..| ...|--.+|...|-+.
T Consensus 138 ~~se~~~vGDRlfTDI~~a----N~mGs~gVw~~~gv~~ 172 (190)
T KOG2961|consen 138 TSSELIMVGDRLFTDIVYA----NRMGSLGVWTEPGVRA 172 (190)
T ss_pred ChhHeEEEccchhhhHhhh----hhccceeEEecccccc
Confidence 566799999997 699999 9999999999887653
No 185
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.36 E-value=2.9 Score=36.33 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=53.8
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhcCCCCCCCeeEeCCC--C-C------hHHHHHHhh-h
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELAGVTITPDRLYGLGT--G-P------KVNVLKQLQ-K 150 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~gl~~~fd~i~~~~~--~-p------KPe~l~~l~-~ 150 (218)
..++.||+.++.+.+ |.++.++||.+.. .+..-|.+ .|...+ +.++=.+. . . |-+.-+++. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHc
Confidence 457899999998876 5799999999864 44555666 787644 55543321 1 2 222333332 3
Q ss_pred cCCCCCCceEEEcCchhhHHhc
Q 027798 151 KPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.... +..|||..+|+.+.
T Consensus 221 GYrI----v~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNI----VGIIGDQWNDLKGE 238 (275)
T ss_pred CceE----EEEECCCHHhccCC
Confidence 4666 88999999999877
No 186
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=86.54 E-value=1.8 Score=37.28 Aligned_cols=76 Identities=26% Similarity=0.304 Sum_probs=53.7
Q ss_pred CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 103 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 103 ~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
++++|||..+...-++.++.+-.+.-.+|..+...-.+|-.+|+.++- . +|++|....++.| . .+++
T Consensus 187 iRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~p---h-----IFFDDQ~~H~~~a----~-~~vp 253 (264)
T PF06189_consen 187 IRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFRP---H-----IFFDDQDGHLESA----S-KVVP 253 (264)
T ss_pred eEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhCC---C-----EeecCchhhhhHh----h-cCCC
Confidence 389999977765445544442223335565444332289999999863 2 8999999999999 4 8999
Q ss_pred EEEEeCCCC
Q 027798 183 LYLVDWGYN 191 (218)
Q Consensus 183 ~i~v~~G~~ 191 (218)
+..|-||-.
T Consensus 254 s~hVP~gv~ 262 (264)
T PF06189_consen 254 SGHVPYGVA 262 (264)
T ss_pred EEeccCCcC
Confidence 999998854
No 187
>PLN02887 hydrolase family protein
Probab=86.33 E-value=0.59 Score=44.79 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=34.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|..+++.+....+.++++++.|||+.||+.+- +.+|. +|++.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeML----e~AG~-gVAMg 549 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEML----QLASL-GVALS 549 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHH----HHCCC-EEEeC
Confidence 777777777666666677799999999999999 99997 44454
No 188
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=85.74 E-value=3.4 Score=36.27 Aligned_cols=89 Identities=17% Similarity=0.241 Sum_probs=52.2
Q ss_pred cCCCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHh--cCCCCCCCeeEeCCCCChHH--HHHHhhhcCCCCCCce
Q 027798 87 ANRLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLREL--AGVTITPDRLYGLGTGPKVN--VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~--~gl~~~fd~i~~~~~~pKPe--~l~~l~~~~~~~~~e~ 159 (218)
...+.||+.|+|+.| +.++.++||++....+..++++ +|+.. +..+....|. ++..|.... ...+.+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i~ssa~~~a~ylk~~~-~~~k~V 109 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENIFSSAYAIADYLKKRK-PFGKKV 109 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcccccChHHHHHHHHHHhC-cCCCeE
Confidence 457999999998876 6799999999988777776652 45432 2333333333 444443322 233457
Q ss_pred EEEcCchhhHHhccccccccCccEEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v 186 (218)
+++|-.-.-=+. +++|+.+.+.
T Consensus 110 yvig~~gi~~eL-----~~aG~~~~g~ 131 (306)
T KOG2882|consen 110 YVIGEEGIREEL-----DEAGFEYFGG 131 (306)
T ss_pred EEecchhhhHHH-----HHcCceeecC
Confidence 777755321111 4456655443
No 189
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=85.47 E-value=1.4 Score=37.38 Aligned_cols=44 Identities=16% Similarity=0.009 Sum_probs=30.5
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeC
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDW 188 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~ 188 (218)
.|-.+++.+..+.+.++++++++|||.+|+.+= ..+...|.|..
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-----~~~~~~vvV~N 208 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-----EGGDHGVVVGN 208 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-----CCSSEEEE-TT
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-----cCcCCEEEEcC
Confidence 566666666655555566699999999999986 56667777753
No 190
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=84.49 E-value=2 Score=36.85 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=29.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhcccccccc---CccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELD---GWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~a---Gi~~i~v~ 187 (218)
.|-.+++++........+++++|||..+|+.+= +.+ +-.+|.|.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf----~~~~~~~g~~vavg 220 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGF----AVVNRLGGISVKVG 220 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHH----HHHHhcCCeEEEEC
Confidence 455566666555444556699999999999887 665 33455554
No 191
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=84.38 E-value=0.73 Score=38.95 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=29.3
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
.|-.+++.+......++++++.|||+.+|+.+= +.+|..
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml----~~ag~g 227 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEML----EVAGLG 227 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHH----HhcCee
Confidence 555566665554555556699999999999999 888864
No 192
>PRK10444 UMP phosphatase; Provisional
Probab=83.19 E-value=2 Score=36.58 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=34.7
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHH---HHHHHhcCCCCCCCeeEeC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVE---TLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~---~~L~~~~gl~~~fd~i~~~ 136 (218)
.++||+.++|+.| |.++.++||++..... ..|+. +|+.--.+.|+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 6899999999877 5799999999886444 44555 6775555666654
No 193
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.70 E-value=16 Score=31.59 Aligned_cols=139 Identities=13% Similarity=0.201 Sum_probs=73.4
Q ss_pred CCCHHHH---HHhHHHhHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHh---cCCCEEEEeC
Q 027798 37 GLTVEGI---LENWLKIKPVIMEEWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKL---ASSRIYIVTS 110 (218)
Q Consensus 37 ~~s~~~i---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~---L~~~l~IvTn 110 (218)
-+|.+|. +..|++-...++-..+++..++.+...+.. ..+..|..++.+. .++++.|.|.
T Consensus 97 ~ltieEKvp~MeeWW~kSH~Lliq~~f~k~~I~~~Va~s~--------------i~lReg~~~ff~~L~~~~IP~~iFSA 162 (298)
T KOG3128|consen 97 VLTIEEKVPHMEEWWTKSHELLIQGGFSKNAIDDIVAESN--------------IALREGYEEFFEALQAHEIPLLIFSA 162 (298)
T ss_pred CCChhhhchHHHHHHhcccceeecCCcCHHHHHHHHHHhh--------------HHHHHHHHHHHHHHHhCCCceEEEec
Confidence 3455543 444554444444455555555444443322 1234555555544 4679999999
Q ss_pred CchHHHHHHHHHhcCCCCCCCeeEeC-----CCC-----ChH--------H-HHHH----hhhcCCCCCCceEEEcCchh
Q 027798 111 NQSRFVETLLRELAGVTITPDRLYGL-----GTG-----PKV--------N-VLKQ----LQKKPEHQGLRLHFVEDRLA 167 (218)
Q Consensus 111 ~~~~~~~~~L~~~~gl~~~fd~i~~~-----~~~-----pKP--------e-~l~~----l~~~~~~~~~e~l~IGDs~~ 167 (218)
+-.+.++.++.+ ......+-.++|. +++ .+| + +++. +.. -.....+++-||+..
T Consensus 163 GigdiiEev~~q-~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~~s~yf~~--~~~~~nVillGdsig 239 (298)
T KOG3128|consen 163 GIGDIIEEVTRQ-KLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQNESEYFHQ--LAGRVNVILLGDSIG 239 (298)
T ss_pred chHHHHHHHHHH-HhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHhhhHHHhh--ccCCceEEEeccccc
Confidence 999999888876 4333223333332 111 222 2 3332 211 112344999999999
Q ss_pred hHHhccccccccCc-cEEEEeCCCCCHHH
Q 027798 168 TLKNVIKEPELDGW-NLYLVDWGYNTPKE 195 (218)
Q Consensus 168 Di~aA~~~~~~aGi-~~i~v~~G~~~~~~ 195 (218)
|+.+|- ...++ ...-+.++....++
T Consensus 240 dl~ma~---gv~~~~~iLkig~l~d~vee 265 (298)
T KOG3128|consen 240 DLHMAD---GVPRVGHILKIGYLNDSVEE 265 (298)
T ss_pred cchhhc---CCcccccceeeecccchHHH
Confidence 999982 11222 33445555555444
No 194
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=82.65 E-value=2.5 Score=36.91 Aligned_cols=48 Identities=19% Similarity=0.143 Sum_probs=41.2
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGT 138 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~ 138 (218)
.-|.|.+.|.+| +..+++=|.++++.+...|+. ++|.++||.|+|...
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G~ 193 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGGN 193 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCCc
Confidence 447777777777 458899999999999999999 999999999998764
No 195
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.60 E-value=7.1 Score=32.16 Aligned_cols=89 Identities=17% Similarity=0.111 Sum_probs=56.7
Q ss_pred CCcccHHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCC--CCe--eEeCC---------CC---ChHHHHHHhhh
Q 027798 89 RLYPGVSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTIT--PDR--LYGLG---------TG---PKVNVLKQLQK 150 (218)
Q Consensus 89 ~l~~gv~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~--fd~--i~~~~---------~~---pKPe~l~~l~~ 150 (218)
..-|++.++|+.+ ...++|-|.++...++.+++. +|+... +.. +..+. .+ -|+ |..+..
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~ 121 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWA 121 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhh
Confidence 4569999999988 469999999999999999998 876432 111 22111 11 222 222211
Q ss_pred cC--CCCCCceEEEcCchhhHHhccccccccCccEE
Q 027798 151 KP--EHQGLRLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~--~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i 184 (218)
+. .-+.+.+++|+|++.-...- =..|+..-
T Consensus 122 ~l~~~~~~~ntiiVDd~p~~~~~~----P~N~i~I~ 153 (195)
T TIGR02245 122 LLPEFYSMKNTIMFDDLRRNFLMN----PQNGLKIR 153 (195)
T ss_pred hcccCCCcccEEEEeCCHHHHhcC----CCCccccC
Confidence 11 11445699999999876655 45577654
No 196
>PLN03190 aminophospholipid translocase; Provisional
Probab=81.11 E-value=10 Score=39.61 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=25.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLR 121 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~ 121 (218)
++-+|+.++++.| |+++.++|+...+.+..+-.
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 6889999999887 56899999877766655533
No 197
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=80.65 E-value=2.6 Score=35.96 Aligned_cols=41 Identities=27% Similarity=0.187 Sum_probs=34.5
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITP 130 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~f 130 (218)
...+++.++|+.| |++++|+||++...+...++. +|+..+|
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~ 64 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPF 64 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCE
Confidence 4567788888876 579999999999999999999 9987655
No 198
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=80.45 E-value=4.1 Score=38.63 Aligned_cols=84 Identities=13% Similarity=0.145 Sum_probs=63.0
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHhhhcCCCCCCceEE
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l~~~~~~~~~e~l~ 161 (218)
...||++|-+.+| +++...+|+.++-.+..+-.. .|+++|.. + .+|| .+++-+.+-.. +-|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-----e--atPEdK~~~I~~eQ~~grl----VAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-----E--ATPEDKLALIRQEQAEGRL----VAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-----c--CChHHHHHHHHHHHhcCcE----EEE
Confidence 4669999998876 679999999999999999888 89876543 2 3454 77777766667 999
Q ss_pred EcCchhhHHhccccccccCccEEEEeCC
Q 027798 162 VEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 162 IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
.||..||--|= .+|.+ .++.+.|
T Consensus 515 tGDGTNDAPAL----AqAdV-g~AMNsG 537 (681)
T COG2216 515 TGDGTNDAPAL----AQADV-GVAMNSG 537 (681)
T ss_pred cCCCCCcchhh----hhcch-hhhhccc
Confidence 99999998776 45554 2334444
No 199
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=80.40 E-value=2.4 Score=41.03 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=42.1
Q ss_pred cCCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCC-CeeEeCCCC
Q 027798 87 ANRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITP-DRLYGLGTG 139 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~f-d~i~~~~~~ 139 (218)
.+++-|++.++|+++. ..++|.|-+++.++..+++- +.- ..|| |.|+|.+..
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~l-iDP~~~lF~dRIisrde~ 254 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKL-IDPEGKYFGDRIISRDES 254 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHH-hCCCCccccceEEEecCC
Confidence 3578899999999986 49999999999999999887 543 2455 779998754
No 200
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=79.75 E-value=7.4 Score=35.61 Aligned_cols=91 Identities=14% Similarity=0.174 Sum_probs=63.6
Q ss_pred CcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcC--CCCCCCeeEeCCC------------------C-Ch------H
Q 027798 90 LYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAG--VTITPDRLYGLGT------------------G-PK------V 142 (218)
Q Consensus 90 l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~g--l~~~fd~i~~~~~------------------~-pK------P 142 (218)
.++-....++..|.++.++||+.-.++...+...+| ...|||.|+.... + ++ |
T Consensus 202 ~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p 281 (424)
T KOG2469|consen 202 TIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGP 281 (424)
T ss_pred ccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCc
Confidence 333355666677889999999999999888876444 6789998765420 0 11 1
Q ss_pred ------------H-HHHHhhhcCCCCCCceEEEcCchh-hHHhccccccccCccEEEEe
Q 027798 143 ------------N-VLKQLQKKPEHQGLRLHFVEDRLA-TLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 143 ------------e-~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~~~~~~aGi~~i~v~ 187 (218)
+ +...++++..+ ++||||... ||.-.. +.-|+.++.|.
T Consensus 282 ~e~~~~ySggs~~~~~~~l~~~g~d----iLy~gdHi~~dvl~sk---k~~~wrt~lv~ 333 (424)
T KOG2469|consen 282 LEQGGVYSGGSLKTVETSMKVKGKD----ILYGGDHIWGDVLVSK---KRRGWRTVLVA 333 (424)
T ss_pred chhcccCCcchHHHHHHHhcccccc----eeecccceeeeEEecc---eecceEEEEEe
Confidence 1 45555655444 999999975 777663 78899888875
No 201
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=76.42 E-value=27 Score=29.96 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=68.2
Q ss_pred cCCCcccHHHHHHhc------CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA------SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L------~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
.-.++|++.++++.. |..+.-+++.+....+++.+ +|..-..- .-+|+..+ .+|+.++.+......
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~v--- 176 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADV--- 176 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCC---
Confidence 345899999999864 33444377777778766655 68654333 34555555 679988877655555
Q ss_pred ceEEEcCc---hhhHHhccccccccCccEEEEeCCCCC
Q 027798 158 RLHFVEDR---LATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 158 e~l~IGDs---~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
.+++|=. +.|+..| -..|.+.+.|.++...
T Consensus 177 -pVI~egGI~tpeda~~A----melGAdgVlV~SAIt~ 209 (248)
T cd04728 177 -PVIVDAGIGTPSDAAQA----MELGADAVLLNTAIAK 209 (248)
T ss_pred -cEEEeCCCCCHHHHHHH----HHcCCCEEEEChHhcC
Confidence 5777755 5699999 9999999999998775
No 202
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=75.91 E-value=5.2 Score=33.50 Aligned_cols=48 Identities=29% Similarity=0.524 Sum_probs=34.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchH----HHHHHHHHhcCCCCCCCeeEeC
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSR----FVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~----~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
..++|++.+.|+.+ +.++.++||++.. ..+.+.++ +|+.-.++.|+++
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~-~g~~~~~~~iits 67 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSL-LGVDVSPDQIITS 67 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHh-cCCCCCHHHeeeH
Confidence 46899999999988 5799999977743 33344444 5776666666654
No 203
>PLN02423 phosphomannomutase
Probab=74.48 E-value=3.2 Score=35.10 Aligned_cols=39 Identities=21% Similarity=0.041 Sum_probs=33.2
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcC----chhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.|. + +++++.+|| ..||+++- +.-|+.++.|+
T Consensus 189 nKg~al~~L~-~----~~e~~aFGD~~~~~~ND~eMl----~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-D----FDEIHFFGDKTYEGGNDHEIF----ESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-C----cCeEEEEeccCCCCCCcHHHH----hCCCcceEEeC
Confidence 6777999988 4 455999999 69999998 77799999996
No 204
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=73.25 E-value=55 Score=30.92 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=62.0
Q ss_pred hCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCC
Q 027798 58 WSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLG 137 (218)
Q Consensus 58 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~ 137 (218)
.|++.+++.....++...+.. ..+++.+.+.++..+. .+|+|.+++..++...+.++|++ .|+|.+
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~---------~~l~~~a~~~~~~~g~-~vvVSASp~~~Vepfa~~~LGid----~VIgTe 153 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYA---------EDVHPETWRVFNSFGK-RYIITASPRIMVEPFVKTFLGAD----KVLGTE 153 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHH---------HhcCHHHHHHHHhCCC-EEEEECCcHHHHHHHHHHcCCCC----EEEecc
Confidence 367766665554444443321 1267777777776554 49999999999999996526764 333322
Q ss_pred -----CC---------------ChHHHHHH-hhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 138 -----TG---------------PKVNVLKQ-LQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 138 -----~~---------------pKPe~l~~-l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
.+ .|-..+++ ++ .+.. .+..|||.+|...- ..++-.
T Consensus 154 Lev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g----~~~~-~~aYgDS~sD~plL----~~a~e~ 210 (497)
T PLN02177 154 LEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG----DALP-DLGLGDRETDHDFM----SICKEG 210 (497)
T ss_pred cEECcCCEEeeeecCCCCCccHHHHHHHHHHhC----CCCc-eEEEECCccHHHHH----HhCCcc
Confidence 01 13334443 22 1111 38999999999987 666643
No 205
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=72.55 E-value=12 Score=29.63 Aligned_cols=72 Identities=17% Similarity=0.124 Sum_probs=49.8
Q ss_pred hhcCCCcccHHHHHHhcC--CCEEEEeCC--chHH----HHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCC
Q 027798 85 IGANRLYPGVSDALKLAS--SRIYIVTSN--QSRF----VETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQG 156 (218)
Q Consensus 85 ~~~~~l~~gv~e~L~~L~--~~l~IvTn~--~~~~----~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~ 156 (218)
.++....|++.+++++|. ..++|||.. .... .+=+++. +-.-++-..|+|..-+ .-..
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~-FPFi~~qn~vfCgnKn----------ivka--- 129 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEK-FPFISYQNIVFCGNKN----------IVKA--- 129 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHH-CCCCChhhEEEecCCC----------eEEe---
Confidence 355678899999999994 599999977 3333 3334455 6666666777777542 2112
Q ss_pred CceEEEcCchhhHHhc
Q 027798 157 LRLHFVEDRLATLKNV 172 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA 172 (218)
-++|+|.+..++.-
T Consensus 130 --DilIDDnp~nLE~F 143 (180)
T COG4502 130 --DILIDDNPLNLENF 143 (180)
T ss_pred --eEEecCCchhhhhc
Confidence 38999999999987
No 206
>PTZ00174 phosphomannomutase; Provisional
Probab=71.34 E-value=5.2 Score=33.67 Aligned_cols=40 Identities=18% Similarity=0.052 Sum_probs=32.9
Q ss_pred ChHHHHHHhhhcCCCCCCceEEEcC----chhhHHhccccccccCccEEEEe
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFVED----RLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
.|-.+++.+...+ ++++.||| +.||+.+= +.+|..+++|.
T Consensus 188 sKg~al~~L~~~~----~eviafGD~~~~~~NDieMl----~~~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLENDF----KEIHFFGDKTFEGGNDYEIY----NDPRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhhh----hhEEEEcccCCCCCCcHhhh----hcCCCceEEeC
Confidence 6777888887654 45999999 89999999 88888777776
No 207
>PRK00208 thiG thiazole synthase; Reviewed
Probab=69.97 E-value=48 Score=28.43 Aligned_cols=95 Identities=16% Similarity=0.147 Sum_probs=67.2
Q ss_pred CCCcccHHHHHHhc------CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEeCCCC-ChHHHHHHhhhcCCCCCCc
Q 027798 88 NRLYPGVSDALKLA------SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGLR 158 (218)
Q Consensus 88 ~~l~~gv~e~L~~L------~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~~~~~-pKPe~l~~l~~~~~~~~~e 158 (218)
-.++|++.++++.. |..+.-+++.+...++++.+ +|..-..- .-+|+..+ .+|+.++.+......
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~v---- 176 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADV---- 176 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCC----
Confidence 35789999999864 23343267777777766655 68654333 34565555 679988887665555
Q ss_pred eEEEcCc---hhhHHhccccccccCccEEEEeCCCCC
Q 027798 159 LHFVEDR---LATLKNVIKEPELDGWNLYLVDWGYNT 192 (218)
Q Consensus 159 ~l~IGDs---~~Di~aA~~~~~~aGi~~i~v~~G~~~ 192 (218)
.+++|=. +.|+..| -..|.+.+.|.++...
T Consensus 177 pVIveaGI~tpeda~~A----melGAdgVlV~SAItk 209 (250)
T PRK00208 177 PVIVDAGIGTPSDAAQA----MELGADAVLLNTAIAV 209 (250)
T ss_pred eEEEeCCCCCHHHHHHH----HHcCCCEEEEChHhhC
Confidence 6777765 4699999 9999999999998765
No 208
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=68.80 E-value=7.8 Score=38.10 Aligned_cols=43 Identities=12% Similarity=-0.068 Sum_probs=28.6
Q ss_pred hHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 141 KVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 141 KPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
|-.+++.+.. ..+++.++++||+.+|..+- +.++...++|.-|
T Consensus 658 KG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf----~~~~~~~~~v~vG 700 (726)
T PRK14501 658 KGRAVRRLLE--AGPYDFVLAIGDDTTDEDMF----RALPETAITVKVG 700 (726)
T ss_pred HHHHHHHHHh--cCCCCEEEEECCCCChHHHH----HhcccCceEEEEC
Confidence 3345555543 34566799999999999998 7764334444444
No 209
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=67.20 E-value=20 Score=32.09 Aligned_cols=81 Identities=20% Similarity=0.298 Sum_probs=49.2
Q ss_pred cCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcCCC-------------CCCCeeEeCCCCChHHHHH-Hh
Q 027798 87 ANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAGVT-------------ITPDRLYGLGTGPKVNVLK-QL 148 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~gl~-------------~~fd~i~~~~~~pKPe~l~-~l 148 (218)
...++|||....+.| + .++.-+||++-..-.. |.++++-. ..||.++.+....|-..++ .+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~-L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil 272 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPT-LQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNIL 272 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHH-HHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHH
Confidence 347999999999877 3 4999999999776533 33323322 2345554443223333333 44
Q ss_pred hhcCCCCCCceEEEcCc-hhhHHh
Q 027798 149 QKKPEHQGLRLHFVEDR-LATLKN 171 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs-~~Di~a 171 (218)
..-|+.+ .+.|||+ .+|.+.
T Consensus 273 ~~~p~~k---fvLVGDsGE~DpeI 293 (373)
T COG4850 273 RRYPDRK---FVLVGDSGEHDPEI 293 (373)
T ss_pred HhCCCce---EEEecCCCCcCHHH
Confidence 4334443 8999999 567653
No 210
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=66.02 E-value=17 Score=32.05 Aligned_cols=74 Identities=7% Similarity=0.051 Sum_probs=46.9
Q ss_pred EEEeCCchHHHHHHHHHhcCCC----CCCCeeEe------------------CCC-C-ChHHHHHHhhhcCCC--CCCce
Q 027798 106 YIVTSNQSRFVETLLRELAGVT----ITPDRLYG------------------LGT-G-PKVNVLKQLQKKPEH--QGLRL 159 (218)
Q Consensus 106 ~IvTn~~~~~~~~~L~~~~gl~----~~fd~i~~------------------~~~-~-pKPe~l~~l~~~~~~--~~~e~ 159 (218)
.+-+.+.... ...+.. .|+. ..|-++.+ .+. . +|-.+++.|...... .+-.+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 4445555444 666776 7764 45655665 321 2 677666555433222 23459
Q ss_pred EEEcCchhhHHhccccccccCccEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
+-+|||+||+.+= +.+.+.++-
T Consensus 230 iaLGDspND~~mL----e~~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFL----RWSEQKVVL 251 (302)
T ss_pred EEecCChhhHHHH----HhCCeeEEe
Confidence 9999999999998 888887764
No 211
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=64.12 E-value=16 Score=30.64 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=33.6
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeE
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLY 134 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~ 134 (218)
+-+...++|+++ |++++|+|+++...+...++. +++....+.++
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~~~I 67 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQPGDYCI 67 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCCCCeEE
Confidence 445667777766 579999999999999999999 88865433333
No 212
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=63.88 E-value=13 Score=30.92 Aligned_cols=38 Identities=24% Similarity=0.081 Sum_probs=31.8
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI 128 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~ 128 (218)
..+...++|+++ |.++.++|+++...+...++. +|+..
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~ 56 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEP 56 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 456788888876 579999999999999999999 99854
No 213
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=63.64 E-value=13 Score=30.19 Aligned_cols=33 Identities=24% Similarity=0.229 Sum_probs=28.0
Q ss_pred HHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 94 VSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 94 v~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
..++|+.+ |++++++||++...+...++. +|+.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 55666655 679999999999999999999 9986
No 214
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=63.31 E-value=22 Score=32.43 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=49.7
Q ss_pred EEEEeCCchHHHHHHHHHhcCCCCCC--CeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCcc
Q 027798 105 IYIVTSNQSRFVETLLRELAGVTITP--DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 105 l~IvTn~~~~~~~~~L~~~~gl~~~f--d~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~ 182 (218)
-.+|||..---.-..+-- +||...| +-|+++....|-.+.+++..+... ...-++|||..---.+| |+.+|+
T Consensus 373 nVlvTttqLipalaKvLL-~gLg~~fpiENIYSa~kiGKescFerI~~RFg~-K~~yvvIgdG~eee~aA----K~ln~P 446 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLL-YGLGSSFPIENIYSATKIGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAA----KALNMP 446 (468)
T ss_pred EEEEeccchhHHHHHHHH-HhcCCcccchhhhhhhhccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHH----HhhCCc
Confidence 457777765443333333 6777666 447777654666544444433332 23358899999999999 999999
Q ss_pred EEEEe
Q 027798 183 LYLVD 187 (218)
Q Consensus 183 ~i~v~ 187 (218)
+.-+.
T Consensus 447 fwrI~ 451 (468)
T KOG3107|consen 447 FWRIS 451 (468)
T ss_pred eEeec
Confidence 87664
No 215
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=59.38 E-value=12 Score=36.72 Aligned_cols=41 Identities=15% Similarity=-0.004 Sum_probs=31.4
Q ss_pred ChHHHHHHhhhcCCCCCCceEEE--cCchhhHHhccccccccCccEE
Q 027798 140 PKVNVLKQLQKKPEHQGLRLHFV--EDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pKPe~l~~l~~~~~~~~~e~l~I--GDs~~Di~aA~~~~~~aGi~~i 184 (218)
.|-.+++.+......+.++++.| ||+.||+.+= +.+|..++
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisML----e~Ag~gVA 655 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSML----ETVDSPIL 655 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHH----HhCCceEE
Confidence 77777777655544455558888 9999999999 99999554
No 216
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=55.46 E-value=80 Score=27.65 Aligned_cols=78 Identities=15% Similarity=0.053 Sum_probs=49.2
Q ss_pred CEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHh-----hhcCCCCCCceEEEcCchh---hHHh
Q 027798 104 RIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQL-----QKKPEHQGLRLHFVEDRLA---TLKN 171 (218)
Q Consensus 104 ~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l-----~~~~~~~~~e~l~IGDs~~---Di~a 171 (218)
...|+|+........+++. +++...++..++.......+ ++..+ ..+|+. ++.-||+.. ...+
T Consensus 31 ~~~~~tg~h~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDi----v~~~gd~~~~la~a~a 105 (365)
T TIGR00236 31 SYVIVTAQHREMLDQVLDL-FHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEKPDI----VLVQGDTTTTLAGALA 105 (365)
T ss_pred EEEEEeCCCHHHHHHHHHh-cCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcCCCE----EEEeCCchHHHHHHHH
Confidence 4678888888888888888 99874444444442112111 22221 123444 888899764 4556
Q ss_pred ccccccccCccEEEEeCCC
Q 027798 172 VIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 172 A~~~~~~aGi~~i~v~~G~ 190 (218)
| +..|++++.+..|-
T Consensus 106 a----~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 106 A----FYLQIPVGHVEAGL 120 (365)
T ss_pred H----HHhCCCEEEEeCCC
Confidence 6 88999999886553
No 217
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=54.05 E-value=1.2e+02 Score=27.13 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=68.7
Q ss_pred cCCCcccHHHHHHhc------CCCEEEEeCCchHHHHHHHHHhcCCCC--CCCeeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA------SSRIYIVTSNQSRFVETLLRELAGVTI--TPDRLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L------~~~l~IvTn~~~~~~~~~L~~~~gl~~--~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
+-.++|++.++++.. |..+.++++.+...++++.+ +|..- ..-.-+|+..+ .+|+.++.+...+..
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~v--- 250 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGATV--- 250 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeeccccccCCCCCCCHHHHHHHHHcCCC---
Confidence 346889999998864 44565777777777766655 67621 11234566555 899988887766666
Q ss_pred ceEEEcCc---hhhHHhccccccccCccEEEEeCCCC
Q 027798 158 RLHFVEDR---LATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 158 e~l~IGDs---~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
-++||-. ..|+..| -..|.+.++++.|-.
T Consensus 251 -pVivdAGIg~~sda~~A----melGadgVL~nSaIa 282 (326)
T PRK11840 251 -PVLVDAGVGTASDAAVA----MELGCDGVLMNTAIA 282 (326)
T ss_pred -cEEEeCCCCCHHHHHHH----HHcCCCEEEEcceec
Confidence 6888876 4699999 999999999998865
No 218
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=53.03 E-value=43 Score=31.85 Aligned_cols=82 Identities=18% Similarity=0.093 Sum_probs=47.8
Q ss_pred HHHHHHhc---CCCEEEEeCCch-HHHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhh
Q 027798 94 VSDALKLA---SSRIYIVTSNQS-RFVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLAT 168 (218)
Q Consensus 94 v~e~L~~L---~~~l~IvTn~~~-~~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~D 168 (218)
+..+|+.. +.+++||+-.+. ..++.+-+- +++.- + +++.... .-...+.++... +. -++|||...
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~l-l~~~i--~-~~~~~~~~e~~~~~~~l~~~-G~----~~viG~~~~- 155 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAA-FNLDI--V-QRSYVTEEDARSCVNDLRAR-GI----GAVVGAGLI- 155 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHH-hCCce--E-EEEecCHHHHHHHHHHHHHC-CC----CEEECChHH-
Confidence 44444433 348999986544 334444343 66542 2 1222211 112266666544 34 488999965
Q ss_pred HHhccccccccCccEEEEeCC
Q 027798 169 LKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 169 i~aA~~~~~~aGi~~i~v~~G 189 (218)
...| +++|++++.+..|
T Consensus 156 ~~~A----~~~gl~~ili~s~ 172 (526)
T TIGR02329 156 TDLA----EQAGLHGVFLYSA 172 (526)
T ss_pred HHHH----HHcCCceEEEecH
Confidence 6777 8999999999765
No 219
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=52.78 E-value=2.1e+02 Score=30.09 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=25.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGV 126 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl 126 (218)
++-+||+|.++.| |+++=|+|+--.+.+..+--. .++
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~L 690 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRL 690 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcC
Confidence 5778888887765 678888887777766665544 443
No 220
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=52.58 E-value=21 Score=28.92 Aligned_cols=40 Identities=20% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT 129 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~ 129 (218)
.+-|...+.|++| |.+++++|+++...+..+++. +++..+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~ 60 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGP 60 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCc
Confidence 3557777888776 579999999999999999888 887643
No 221
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=52.20 E-value=9.6 Score=25.55 Aligned_cols=23 Identities=35% Similarity=0.391 Sum_probs=12.9
Q ss_pred HHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 146 KQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.++..+.+. .+|+||+..|++..
T Consensus 8 qQLLK~fG~----~IY~gdr~~DielM 30 (62)
T PF06014_consen 8 QQLLKKFGI----IIYVGDRLWDIELM 30 (62)
T ss_dssp HHHHHTTS---------S-HHHHHHHH
T ss_pred HHHHHHCCE----EEEeCChHHHHHHH
Confidence 445556777 99999999999876
No 222
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=52.19 E-value=24 Score=28.76 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=31.6
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT 129 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~ 129 (218)
+-|...++|+++ |.+++|+|+++...+...++. +++..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 446677777776 579999999999999988888 888654
No 223
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=51.77 E-value=23 Score=31.20 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=31.9
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT 129 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~ 129 (218)
.++-+.++|++| +++++++|+++...+..+.+. +++..+
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 556677777766 679999999999999999999 998653
No 224
>COG3933 Transcriptional antiterminator [Transcription]
Probab=51.44 E-value=34 Score=31.88 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=67.9
Q ss_pred cccchhhhhHHHHHHHHHhcccccccccccccCCCHHHHHHhHHH-hH-HHHHHhhCC----CHHHHHHHHHHHHHHHHH
Q 027798 5 RPVVETGYDTLLLVRLLLEMRLPSLRKSSVAEGLTVEGILENWLK-IK-PVIMEEWSE----NREALIELSGKVRDEWMD 78 (218)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~~~~~-~~-~~~~~~~g~----~~~~~~~~~~~~~~~~~~ 78 (218)
=|..|+||=+.++..+.++.+.+-++.--.|||+|...-+..... +. ..+...... ++.+..+...++.+.
T Consensus 85 ip~~Ev~~Lal~l~~~~~~~~~~~v~vIiiAHG~sTASSmaevanrLL~~~~~~aiDMPLdvsp~~vle~l~e~~k~--- 161 (470)
T COG3933 85 IPADEVLYLALFLHECRHYTQNPRVKVIIIAHGYSTASSMAEVANRLLGEEIFIAIDMPLDVSPSDVLEKLKEYLKE--- 161 (470)
T ss_pred CChHHHHHHHHHHHHhhhcccCCceeEEEEecCcchHHHHHHHHHHHhhccceeeecCCCcCCHHHHHHHHHHHHHh---
Confidence 488999999999999999999998888889999999887776643 22 222222222 233333333332221
Q ss_pred HhHhh-hh---hcCCCcccHHHHHH-hcCCCEEEEeCCchHHHHHHHHH
Q 027798 79 TDFTT-WI---GANRLYPGVSDALK-LASSRIYIVTSNQSRFVETLLRE 122 (218)
Q Consensus 79 ~~~~~-~~---~~~~l~~gv~e~L~-~L~~~l~IvTn~~~~~~~~~L~~ 122 (218)
..... .. +...+ .-..+.|. .+++++-+++|=+...+-...++
T Consensus 162 ~~~~~GlllLVDMGSL-~~f~~~i~~~~~ipv~~i~nVST~~vLea~rk 209 (470)
T COG3933 162 RDYRSGLLLLVDMGSL-TSFGSIISEEFGIPVKVIPNVSTSMVLEAGRK 209 (470)
T ss_pred cCccCceEEEEecchH-HHHHHHHHHHhCCceEEEecccHHHHHHHHHH
Confidence 11111 00 00001 11222333 45789999999888776666555
No 225
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=50.85 E-value=27 Score=29.11 Aligned_cols=38 Identities=21% Similarity=0.399 Sum_probs=30.8
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI 128 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~ 128 (218)
+-+...++|+++ |.+++|+|+++...+...++. +++..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 446667777766 679999999999999999998 88763
No 226
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=50.47 E-value=47 Score=29.21 Aligned_cols=44 Identities=27% Similarity=0.517 Sum_probs=31.7
Q ss_pred hcCCCcccHHHHHHhc---C-CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC
Q 027798 86 GANRLYPGVSDALKLA---S-SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 86 ~~~~l~~gv~e~L~~L---~-~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
....+||...++++.+ + .+++||||++. ..+++. +. .+|.++-+
T Consensus 89 GEPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~~s 136 (296)
T COG0731 89 GEPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLYVS 136 (296)
T ss_pred CCcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEEEE
Confidence 3457999999888866 4 48999999998 455555 33 56776643
No 227
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=48.23 E-value=36 Score=27.41 Aligned_cols=37 Identities=27% Similarity=0.422 Sum_probs=31.3
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
+-|...++|+.| |.+++++|+++...+..++.. +++.
T Consensus 16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~ 55 (254)
T PF08282_consen 16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKE-LGID 55 (254)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHC
T ss_pred eCHHHHHHHHhhcccceEEEEEccCccccccccccc-ccch
Confidence 556777777765 679999999999999999998 8876
No 228
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=48.11 E-value=78 Score=28.16 Aligned_cols=76 Identities=20% Similarity=0.276 Sum_probs=46.0
Q ss_pred CEEEEeCCc--hHHHHHHHHHhcCCCCCCCeeEeCCCCChHH----HHHHh-----hhcCCCCCCceEEEcCchh---hH
Q 027798 104 RIYIVTSNQ--SRFVETLLRELAGVTITPDRLYGLGTGPKVN----VLKQL-----QKKPEHQGLRLHFVEDRLA---TL 169 (218)
Q Consensus 104 ~l~IvTn~~--~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe----~l~~l-----~~~~~~~~~e~l~IGDs~~---Di 169 (218)
...|+|+.. ......+.+. +++ ...+..+..+....-. ++..+ ..+|+. +++.||+.. ..
T Consensus 11 ~~li~tG~H~~~~~g~~~~~~-f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Pd~----Vlv~GD~~~~la~a 84 (346)
T PF02350_consen 11 LILIVTGQHLDPEMGDTFFEG-FGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLEREKPDA----VLVLGDRNEALAAA 84 (346)
T ss_dssp EEEEEECSS--CHHHHHHHHH-TT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHHT-SE----EEEETTSHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHhh-CCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCE----EEEEcCCchHHHHH
Confidence 456888877 7788888888 998 7778777654431111 22221 234555 999999975 45
Q ss_pred HhccccccccCccEEEEeCC
Q 027798 170 KNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 170 ~aA~~~~~~aGi~~i~v~~G 189 (218)
.+| ...+++++.+.-|
T Consensus 85 laA----~~~~ipv~HieaG 100 (346)
T PF02350_consen 85 LAA----FYLNIPVAHIEAG 100 (346)
T ss_dssp HHH----HHTT-EEEEES--
T ss_pred HHH----HHhCCCEEEecCC
Confidence 566 8899999999877
No 229
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=47.82 E-value=30 Score=29.18 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=32.6
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT 129 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~ 129 (218)
.+-+...++|+++ |.+++++|+++...+...++. +++..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 3556677787776 579999999999999999999 888654
No 230
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=46.49 E-value=47 Score=27.70 Aligned_cols=43 Identities=14% Similarity=0.096 Sum_probs=32.3
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 135 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~ 135 (218)
-|...++++++ ++.++++|+++...++.+++. +++.. ++.+++
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 35666777665 459999999999999999988 88653 555554
No 231
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=45.11 E-value=16 Score=32.73 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=28.6
Q ss_pred CCCCCceEEEcCch-hhHHhcccccc---------------ccCccEEEEeCCCC
Q 027798 153 EHQGLRLHFVEDRL-ATLKNVIKEPE---------------LDGWNLYLVDWGYN 191 (218)
Q Consensus 153 ~~~~~e~l~IGDs~-~Di~aA~~~~~---------------~aGi~~i~v~~G~~ 191 (218)
..+.++..||||.+ .|+.+| . +-|+.+|.|..|-.
T Consensus 294 ~~~~k~lymvGDNP~sDv~GA----~lf~~yap~~~~g~~~~~~w~SILV~TGV~ 344 (389)
T KOG1618|consen 294 AAPIKKLYMVGDNPMSDVRGA----NLFHQYAPELGAGGSANYGWISILVRTGVY 344 (389)
T ss_pred cCCcceeeeecCCCccccccc----ccccccccccccccccCCCceEEEEeeeee
Confidence 34566799999998 699999 6 88999999988744
No 232
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=45.02 E-value=34 Score=28.69 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=32.9
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI 128 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~ 128 (218)
..-+-+.++|+++ |.+++|+|+++...+..+++. +++..
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~ 61 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDG 61 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCc
Confidence 3566777888755 679999999999999999999 99876
No 233
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=44.90 E-value=38 Score=28.27 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=31.8
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCC
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTI 128 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~ 128 (218)
.+-|...++|+++ |.+++|+|+.+...+...++. +++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCC
Confidence 3556677787766 679999999999999999999 88764
No 234
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=44.80 E-value=78 Score=29.91 Aligned_cols=95 Identities=18% Similarity=0.190 Sum_probs=61.9
Q ss_pred cCCCcccH--HHHHHhc---CCCEEEEeC--CchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChH--HHHHHhhhcCCCC
Q 027798 87 ANRLYPGV--SDALKLA---SSRIYIVTS--NQSRFVETLLRELAGVTITPDRLYGLGTG--PKV--NVLKQLQKKPEHQ 155 (218)
Q Consensus 87 ~~~l~~gv--~e~L~~L---~~~l~IvTn--~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKP--e~l~~l~~~~~~~ 155 (218)
...+||.. .++.+++ +.++.++|. -+.+.++.+|.. +|-+.+=--++.+... .|. +..+........+
T Consensus 95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd 173 (635)
T COG5610 95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVD 173 (635)
T ss_pred eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhcCCC
Confidence 34577763 3455554 468888885 466788889988 8876554446665432 333 2333332222345
Q ss_pred CCceEEEcCch-hhHHhccccccccCccEEEE
Q 027798 156 GLRLHFVEDRL-ATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 156 ~~e~l~IGDs~-~Di~aA~~~~~~aGi~~i~v 186 (218)
|.+.+.+||.. .|+..+ ++.|+.+...
T Consensus 174 ~~~w~H~GDN~~aD~l~p----k~LgI~Tlf~ 201 (635)
T COG5610 174 PKKWIHCGDNWVADYLKP----KNLGISTLFY 201 (635)
T ss_pred hhheEEecCchhhhhcCc----cccchhHHHH
Confidence 55599999997 599999 9999987654
No 235
>PLN02580 trehalose-phosphatase
Probab=44.49 E-value=52 Score=30.04 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=34.8
Q ss_pred hHHHHHHhhhcCCCCCC-c--eEEEcCchhhHHhccccccc-----cCccEEEEeCCCCCHHHHHhhcCCCceEEechhh
Q 027798 141 KVNVLKQLQKKPEHQGL-R--LHFVEDRLATLKNVIKEPEL-----DGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSD 212 (218)
Q Consensus 141 KPe~l~~l~~~~~~~~~-e--~l~IGDs~~Di~aA~~~~~~-----aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~e 212 (218)
|-.+++.+......+.. . .+||||..+|..+- +. .|+ .|.|..|- . ...+. +.+.+..|
T Consensus 302 KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF----~~L~~~~~G~-~I~Vgn~~--~----~t~A~--y~L~dp~e 368 (384)
T PLN02580 302 KGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAF----KVLREGNRGY-GILVSSVP--K----ESNAF--YSLRDPSE 368 (384)
T ss_pred HHHHHHHHHHhcCCCcccceeEEEECCCchHHHHH----HhhhccCCce-EEEEecCC--C----Cccce--EEcCCHHH
Confidence 33355555443333222 2 38999999999987 53 243 44554331 1 11223 56667777
Q ss_pred Hhhhc
Q 027798 213 FCTKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
..++|
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 66554
No 236
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.09 E-value=55 Score=30.98 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=48.3
Q ss_pred HHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--------ChHH----HHHHhhhcCCCCCCce
Q 027798 95 SDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--------PKVN----VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 95 ~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--------pKPe----~l~~l~~~~~~~~~e~ 159 (218)
.+.++.| |.-++|+|-+....++....+ ..|.|+--++. ||.+ ++++|+...+- .
T Consensus 261 Q~~Ik~l~kqGVlLav~SKN~~~da~evF~k------hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dS----m 330 (574)
T COG3882 261 QNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK------HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDS----M 330 (574)
T ss_pred HHHHHHHHhccEEEEEecCCchhhHHHHHhh------CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccc----e
Confidence 3444444 457899998887777777665 33444443221 8888 66666665444 9
Q ss_pred EEEcCchhhHHhccccccccC
Q 027798 160 HFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aG 180 (218)
+||+|++...+-- ++.+
T Consensus 331 vFiDD~p~ErE~v----k~~~ 347 (574)
T COG3882 331 VFIDDNPAERELV----KREL 347 (574)
T ss_pred EEecCCHHHHHHH----HhcC
Confidence 9999999988887 6655
No 237
>PRK10976 putative hydrolase; Provisional
Probab=42.74 E-value=33 Score=28.75 Aligned_cols=39 Identities=18% Similarity=0.159 Sum_probs=31.3
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT 129 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~ 129 (218)
+-+...++|+++ |.+++|+|+.+...+...++. +++..+
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 445567777766 679999999999999999998 887643
No 238
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=41.79 E-value=49 Score=27.68 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=29.2
Q ss_pred cccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 91 YPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 91 ~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
.+...++|+.| |.+++++|+++...+...++. +|+.
T Consensus 18 ~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~ 56 (256)
T TIGR01486 18 WGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLE 56 (256)
T ss_pred chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 34466676665 679999999999999999999 8875
No 239
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=41.32 E-value=60 Score=27.44 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=30.3
Q ss_pred CcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCC
Q 027798 90 LYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVT 127 (218)
Q Consensus 90 l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~ 127 (218)
..+-..+.|+++ |++++|+|+++...+..+++. +|+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 345566777766 679999999999999999999 8875
No 240
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=41.16 E-value=1.6e+02 Score=25.49 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=70.2
Q ss_pred cCCCcccHHHHHHhc------CCCEEEEeCCchHHHHHHHHHhcCCCCCCC--eeEeCCCC-ChHHHHHHhhhcCCCCCC
Q 027798 87 ANRLYPGVSDALKLA------SSRIYIVTSNQSRFVETLLRELAGVTITPD--RLYGLGTG-PKVNVLKQLQKKPEHQGL 157 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L------~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd--~i~~~~~~-pKPe~l~~l~~~~~~~~~ 157 (218)
.-.++|+..|+|+.. |..+.-.+|.+...++++.+ .|..-..- .=+|+..+ ..|..++.+...+..
T Consensus 116 ~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~v--- 190 (267)
T CHL00162 116 PKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKI--- 190 (267)
T ss_pred CcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCC---
Confidence 346899999999854 44777788888877766655 68643221 12455555 788888888877766
Q ss_pred ceEEEcCc---hhhHHhccccccccCccEEEEeCCCC
Q 027798 158 RLHFVEDR---LATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 158 e~l~IGDs---~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
-+++|-. ..|+..| -..|.+.++++.|..
T Consensus 191 -pVivdAGIgt~sDa~~A----mElGaDgVL~nSaIa 222 (267)
T CHL00162 191 -PVIIDAGIGTPSEASQA----MELGASGVLLNTAVA 222 (267)
T ss_pred -cEEEeCCcCCHHHHHHH----HHcCCCEEeecceee
Confidence 6888765 4699999 999999999988755
No 241
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=40.97 E-value=42 Score=33.89 Aligned_cols=33 Identities=15% Similarity=-0.050 Sum_probs=22.0
Q ss_pred ChHHHHHHhhh---cCCCCCCceEEEcCchhhHHhc
Q 027798 140 PKVNVLKQLQK---KPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 140 pKPe~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA 172 (218)
.|-.+++.+.. .....++++++|||..+|..+=
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF 797 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMF 797 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHH
Confidence 44446665532 1233455699999999998886
No 242
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=40.43 E-value=79 Score=30.20 Aligned_cols=73 Identities=15% Similarity=0.075 Sum_probs=43.1
Q ss_pred CCEEEEeCCchH-HHHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhhHHhccccccccC
Q 027798 103 SRIYIVTSNQSR-FVETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 103 ~~l~IvTn~~~~-~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aG 180 (218)
.+++||+-.+.- .++.+-+- +++.- + +++.... .-...++++... +. -++|||... ...| +++|
T Consensus 108 ~~iavv~~~~~~~~~~~~~~~-l~~~i--~-~~~~~~~~e~~~~v~~lk~~-G~----~~vvG~~~~-~~~A----~~~g 173 (538)
T PRK15424 108 SSIGVVTYQETIPALVAFQKT-FNLRI--E-QRSYVTEEDARGQINELKAN-GI----EAVVGAGLI-TDLA----EEAG 173 (538)
T ss_pred CcEEEEecCcccHHHHHHHHH-hCCce--E-EEEecCHHHHHHHHHHHHHC-CC----CEEEcCchH-HHHH----HHhC
Confidence 489999855443 34333343 66542 2 1222211 112266666544 34 488999877 6778 8999
Q ss_pred ccEEEEeCC
Q 027798 181 WNLYLVDWG 189 (218)
Q Consensus 181 i~~i~v~~G 189 (218)
+..+.+..+
T Consensus 174 ~~g~~~~s~ 182 (538)
T PRK15424 174 MTGIFIYSA 182 (538)
T ss_pred CceEEecCH
Confidence 999988643
No 243
>cd01481 vWA_collagen_alpha3-VI-like VWA_collagen alpha 3(VI) like: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different collagen types identified thus far. Collagens are centrally involved in the formation of fibrillar and microfibrillar networks of the extracellular matrix, basement membranes as well as other structures of the extracellular matrix. Some collagens have about 15-18 vWA domains in them. The VWA domains present in these collagens mediate protein-protein interactions.
Probab=37.75 E-value=51 Score=25.88 Aligned_cols=52 Identities=8% Similarity=-0.045 Sum_probs=34.5
Q ss_pred CceEEEcCchh--hHHhccccccccCccEEEEeCCCCCHHHHHhh--cCCCceEEe
Q 027798 157 LRLHFVEDRLA--TLKNVIKEPELDGWNLYLVDWGYNTPKERAEA--ASMPRIQLL 208 (218)
Q Consensus 157 ~e~l~IGDs~~--Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~--~~~~~i~~~ 208 (218)
.-+++|=|... |+..+.+..|++|+..++|.-|....++|... .|+.++.+.
T Consensus 108 kv~vviTdG~s~d~~~~~a~~lr~~gv~i~~vG~~~~~~~eL~~ias~p~~vf~v~ 163 (165)
T cd01481 108 QFLVLITGGKSQDDVERPAVALKRAGIVPFAIGARNADLAELQQIAFDPSFVFQVS 163 (165)
T ss_pred eEEEEEeCCCCcchHHHHHHHHHHCCcEEEEEeCCcCCHHHHHHHhCCCccEEEec
Confidence 34677878764 56555566689999999998884456666553 455555544
No 244
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=36.69 E-value=31 Score=30.32 Aligned_cols=47 Identities=23% Similarity=0.315 Sum_probs=31.3
Q ss_pred CCCcccHHHHHHhc-------CCCEEEEeCCc---hHH-HHHHHHHhcCCCCCCCeeEe
Q 027798 88 NRLYPGVSDALKLA-------SSRIYIVTSNQ---SRF-VETLLRELAGVTITPDRLYG 135 (218)
Q Consensus 88 ~~l~~gv~e~L~~L-------~~~l~IvTn~~---~~~-~~~~L~~~~gl~~~fd~i~~ 135 (218)
..++||+.++|+.| +.++.++||++ ... ++.+.++ +|+.--.+.|++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~-lG~~~~~~~i~~ 72 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSL-LGVDVSPLQVIQ 72 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHH-cCCCCCHHHHHh
Confidence 45799999888765 45799999997 343 4444477 887644444443
No 245
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=35.18 E-value=63 Score=26.04 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=29.6
Q ss_pred CcccHHHHHHh---cCCCEEEEeCCchHHHHHHHHHhcCCCC
Q 027798 90 LYPGVSDALKL---ASSRIYIVTSNQSRFVETLLRELAGVTI 128 (218)
Q Consensus 90 l~~gv~e~L~~---L~~~l~IvTn~~~~~~~~~L~~~~gl~~ 128 (218)
+-+...++|++ .|++++++|+.+...+..+++. +|+..
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~ 56 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPD 56 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCC
Confidence 44566677776 4679999999999999888888 88543
No 246
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=34.99 E-value=85 Score=25.78 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=26.9
Q ss_pred cCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe
Q 027798 101 ASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 135 (218)
Q Consensus 101 L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~ 135 (218)
-+++++|+|+++...+...+.. +++. .++.++|
T Consensus 29 ~gi~~viaTGR~~~~v~~~~~~-l~l~-~~~~~I~ 61 (236)
T TIGR02471 29 DAVGFGIATGRSVESAKSRYAK-LNLP-SPDVLIA 61 (236)
T ss_pred CCceEEEEeCCCHHHHHHHHHh-CCCC-CCCEEEE
Confidence 3679999999999999999998 8876 4555554
No 247
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=34.11 E-value=1.4e+02 Score=25.28 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=28.1
Q ss_pred CCcccHHHHHHhcC---CCEEEEeCCchHHHHHHHHHh--cCCC
Q 027798 89 RLYPGVSDALKLAS---SRIYIVTSNQSRFVETLLREL--AGVT 127 (218)
Q Consensus 89 ~l~~gv~e~L~~L~---~~l~IvTn~~~~~~~~~L~~~--~gl~ 127 (218)
...||..|+|+.|. .++=.+||...+.-..+.+++ +|+.
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 37899999999985 478889998877655544441 5654
No 248
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=33.97 E-value=47 Score=26.40 Aligned_cols=83 Identities=19% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHHhcC---CCEEEEeCCchHH-HHHHHHHhcCCCCCCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceEEEcCchhh
Q 027798 94 VSDALKLAS---SRIYIVTSNQSRF-VETLLRELAGVTITPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLHFVEDRLAT 168 (218)
Q Consensus 94 v~e~L~~L~---~~l~IvTn~~~~~-~~~~L~~~~gl~~~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l~IGDs~~D 168 (218)
+..+|..++ .++++++..+.-. ...+-+. +|+.- . ++..++. .=...+.++.... . -++||+...
T Consensus 66 il~al~~a~~~~~~Iavv~~~~~~~~~~~~~~l-l~~~i--~-~~~~~~~~e~~~~i~~~~~~G-~----~viVGg~~~- 135 (176)
T PF06506_consen 66 ILRALAKAKKYGPKIAVVGYPNIIPGLESIEEL-LGVDI--K-IYPYDSEEEIEAAIKQAKAEG-V----DVIVGGGVV- 135 (176)
T ss_dssp HHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHH-HT-EE--E-EEEESSHHHHHHHHHHHHHTT-------EEEESHHH-
T ss_pred HHHHHHHHHhcCCcEEEEecccccHHHHHHHHH-hCCce--E-EEEECCHHHHHHHHHHHHHcC-C----cEEECCHHH-
Confidence 344444443 4899998665543 4444444 66521 1 1222221 1112666665443 3 499999975
Q ss_pred HHhccccccccCccEEEEeCCC
Q 027798 169 LKNVIKEPELDGWNLYLVDWGY 190 (218)
Q Consensus 169 i~aA~~~~~~aGi~~i~v~~G~ 190 (218)
...| ++.|++++.+..|.
T Consensus 136 ~~~A----~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 136 CRLA----RKLGLPGVLIESGE 153 (176)
T ss_dssp HHHH----HHTTSEEEESS--H
T ss_pred HHHH----HHcCCcEEEEEecH
Confidence 6888 89999999987654
No 249
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=33.84 E-value=2.8e+02 Score=24.64 Aligned_cols=25 Identities=4% Similarity=-0.085 Sum_probs=21.6
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEe
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
-++||||...++-| -..|.+++.+.
T Consensus 283 ~~vitdSSggi~EA----~~lg~Pvv~l~ 307 (365)
T TIGR03568 283 DAVIGNSSSGIIEA----PSFGVPTINIG 307 (365)
T ss_pred CEEEEcChhHHHhh----hhcCCCEEeec
Confidence 48999998888888 89999999774
No 250
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=33.73 E-value=2.2e+02 Score=29.09 Aligned_cols=116 Identities=24% Similarity=0.249 Sum_probs=74.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHHhcCCCCC---CCeeEeCCCC-----------Ch--------HH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRELAGVTIT---PDRLYGLGTG-----------PK--------VN 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~~~gl~~~---fd~i~~~~~~-----------pK--------Pe 143 (218)
+..|||++.++.. |+.+-.||+.+-..++.+-.. .||... |-.+-|.+.. || |.
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 5779999999865 679999999999999999998 998532 2223343321 21 21
Q ss_pred ----HHHHhhhcCCCCCCceEEEcCchhhHHhccccccccCccEEEEeCCCCCHHHHHhhcCCCceEEechhhHhhhc
Q 027798 144 ----VLKQLQKKPEHQGLRLHFVEDRLATLKNVIKEPELDGWNLYLVDWGYNTPKERAEAASMPRIQLLQLSDFCTKL 217 (218)
Q Consensus 144 ----~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~~~~~i~~~~l~el~~~~ 217 (218)
..+.+...-+. +-+-||..+|--|= |.|.+-. .-|..-- +.+....|.++.-+|...+++.+
T Consensus 726 DK~lLVk~L~~~g~V----VAVTGDGTNDaPAL----keADVGl---AMGIaGT-eVAKEaSDIIi~DDNFssIVk~v 791 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQGEV----VAVTGDGTNDAPAL----KEADVGL---AMGIAGT-EVAKEASDIIILDDNFSSIVKAV 791 (1034)
T ss_pred hHHHHHHHHHhcCcE----EEEecCCCCCchhh----hhcccch---hccccch-hhhhhhCCeEEEcCchHHHHHHH
Confidence 33334432233 67779999999988 8888632 2232212 23334567666666777776654
No 251
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=33.42 E-value=31 Score=27.89 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=32.7
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhc-----CCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEE
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELA-----GVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHF 161 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~-----gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~ 161 (218)
...+.|+....+++.+++++++...-....-..... + .+...||.|+..+. ..-+-+.++|..++. +.+
T Consensus 103 EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~-~~~~~r~~l~~f~~i~aqs~-~da~r~~~lG~~~~~----v~v 176 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRR-FPFLFRPLLSRFDRILAQSE-ADAERFRKLGAPPER----VHV 176 (186)
T ss_dssp S----HHHHHH-----S-EEEEEE---------------HHHHHHGGG-SEEEESSH-HHHHHHHTTT-S--S----EEE
T ss_pred ccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhh-hHHHHHHHHHhCCEEEECCH-HHHHHHHHcCCCcce----EEE
Confidence 356888888888888889988876655432111111 1 23457888877653 234477778887766 999
Q ss_pred EcCchhhHH
Q 027798 162 VEDRLATLK 170 (218)
Q Consensus 162 IGDs~~Di~ 170 (218)
.||-..|..
T Consensus 177 ~GnlKfd~~ 185 (186)
T PF04413_consen 177 TGNLKFDQA 185 (186)
T ss_dssp ---GGG---
T ss_pred eCcchhccc
Confidence 999988863
No 252
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=31.71 E-value=2.3e+02 Score=26.87 Aligned_cols=66 Identities=12% Similarity=0.104 Sum_probs=41.4
Q ss_pred hhCCCHHHHHHHHHHHHHHHHHHhHhhhhhcCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeC
Q 027798 57 EWSENREALIELSGKVRDEWMDTDFTTWIGANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGL 136 (218)
Q Consensus 57 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~ 136 (218)
-.|+..+++...-..+...+.. + .+-+..-+..+.-+ +.+|+|..++..++..++.++|. |.|+|.
T Consensus 73 f~Gl~~~die~vaRavlpkf~~-------~--dv~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGT 138 (498)
T PLN02499 73 TAGVHESEIESVARAVLPKFYM-------D--DVDMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGS 138 (498)
T ss_pred hCCCCHHHHHHHHHHHhhHHHH-------h--hCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEee
Confidence 3467766665555555444321 1 12333445555544 99999999999999999986775 445443
No 253
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=31.05 E-value=29 Score=29.19 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=27.7
Q ss_pred HHHHHHhc--CCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEe
Q 027798 94 VSDALKLA--SSRIYIVTSNQSRFVETLLRELAGVTITPDRLYG 135 (218)
Q Consensus 94 v~e~L~~L--~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~ 135 (218)
+.++|..| +..++|||++.-...+..|.. ..+...||++++
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~-~~~~~~fdy~f~ 43 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGG-DDVLDNFDYVFP 43 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHST-TTHHHH-SEEEE
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcc-cchHhhCCeeec
Confidence 45778777 359999999998877776632 244567888775
No 254
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.72 E-value=44 Score=22.60 Aligned_cols=23 Identities=26% Similarity=0.317 Sum_probs=17.9
Q ss_pred HHhhhcCCCCCCceEEEcCchhhHHhc
Q 027798 146 KQLQKKPEHQGLRLHFVEDRLATLKNV 172 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
+++..+.+. ++|+||+..||+.-
T Consensus 8 qQlLK~~G~----ivyfg~r~~~iemm 30 (68)
T COG4483 8 QQLLKKFGI----IVYFGKRLYDIEMM 30 (68)
T ss_pred HHHHHHCCe----eeecCCHHHHHHHH
Confidence 455556677 89999999999875
No 255
>PF13086 AAA_11: AAA domain; PDB: 2XZL_A 2XZO_A 2WJY_A 2WJV_A 2XZP_A 2GK6_A 2GK7_A 2GJK_A.
Probab=29.38 E-value=57 Score=25.96 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=29.3
Q ss_pred CCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCC--ChHHHHHHhhhcCCCCCCceEEEcCch
Q 027798 103 SRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTG--PKVNVLKQLQKKPEHQGLRLHFVEDRL 166 (218)
Q Consensus 103 ~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~--pKPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
.++.+.|-.+. ....+. .....||.|+--|.. +-|+++--+...+.. +++|||..
T Consensus 171 ~~vi~~T~~~~--~~~~~~---~~~~~~d~vIvDEAsq~~e~~~l~~l~~~~~~----~vlvGD~~ 227 (236)
T PF13086_consen 171 ADVIFTTLSSA--ASPFLS---NFKEKFDVVIVDEASQITEPEALIPLSRAPKR----IVLVGDPK 227 (236)
T ss_dssp -SEEEEETCGG--G-CCGT---T-----SEEEETTGGGS-HHHHHHHHTTTBSE----EEEEE-TT
T ss_pred ccccccccccc--hhhHhh---hhcccCCEEEEeCCCCcchHHHHHHHHHhCCE----EEEECChh
Confidence 47777775554 222222 233379999987765 667766666544344 99999973
No 256
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=28.68 E-value=78 Score=25.19 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=28.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHHHHHHHHH
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRFVETLLRE 122 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~~~~~L~~ 122 (218)
.+-+.+.+.|++| +.+++|+|+++...+...++.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~ 53 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ 53 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh
Confidence 4557788888877 368999999999999988876
No 257
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=27.73 E-value=1.5e+02 Score=27.05 Aligned_cols=73 Identities=21% Similarity=0.115 Sum_probs=49.0
Q ss_pred CcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCCCCCCCee-EeCCCC----ChHHHHHHhhhcCCCCCCceEEE
Q 027798 90 LYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGVTITPDRL-YGLGTG----PKVNVLKQLQKKPEHQGLRLHFV 162 (218)
Q Consensus 90 l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i-~~~~~~----pKPe~l~~l~~~~~~~~~e~l~I 162 (218)
--||+.-+|..+. ..+.|+|+....++..++++ +.-..|+..- ++.... ++-.=+..|+.++.. +++|
T Consensus 215 kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~k----VivV 289 (393)
T KOG2832|consen 215 KRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISYKLFRGATKYEEGHHVKDLSKLNRDLQK----VIVV 289 (393)
T ss_pred cCchHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEEEEecCcccccCccchhhhhhhccccce----eEEE
Confidence 3488888888885 48999999999999999998 6655555442 222221 333346667765555 8888
Q ss_pred cCchh
Q 027798 163 EDRLA 167 (218)
Q Consensus 163 GDs~~ 167 (218)
+=..+
T Consensus 290 d~d~~ 294 (393)
T KOG2832|consen 290 DFDAN 294 (393)
T ss_pred Ecccc
Confidence 64443
No 258
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=27.71 E-value=3.5e+02 Score=23.85 Aligned_cols=27 Identities=19% Similarity=0.343 Sum_probs=21.1
Q ss_pred CCCcccHHHHHHhc---CCCEEEEeCCchH
Q 027798 88 NRLYPGVSDALKLA---SSRIYIVTSNQSR 114 (218)
Q Consensus 88 ~~l~~gv~e~L~~L---~~~l~IvTn~~~~ 114 (218)
..++|.+.++++.+ +..++|.||+...
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 45678888888766 5699999999764
No 259
>KOG3217 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=27.49 E-value=1.4e+02 Score=23.63 Aligned_cols=69 Identities=10% Similarity=0.139 Sum_probs=41.0
Q ss_pred cCCCcccHHHHHHhcCCCEEEEeCCchHHHHHHHHHhcCCCCCCCeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCc
Q 027798 87 ANRLYPGVSDALKLASSRIYIVTSNQSRFVETLLRELAGVTITPDRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDR 165 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~~~l~IvTn~~~~~~~~~L~~~~gl~~~fd~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs 165 (218)
...|-|-....|++-|+++ +...+... -+. ..+||.|++-|....-++++.....|.....++.+.|+=
T Consensus 53 G~~PD~R~~s~lK~hGI~~---~H~aRqit---~~D----F~~FDYI~~MDesN~~dL~~~a~~~~~~~kakV~Llgsy 121 (159)
T KOG3217|consen 53 GRSPDPRTLSILKKHGIKI---DHLARQIT---TSD----FREFDYILAMDESNLRDLLRKASNQPKGSKAKVLLLGSY 121 (159)
T ss_pred CCCCChHHHHHHHHcCCcc---hhhccccc---HhH----hhhcceeEEecHHHHHHHHHHhccCCCCcceEEEEeecc
Confidence 3456677778887776652 22222111 111 347999999876444455555556666666778888764
No 260
>PF05783 DLIC: Dynein light intermediate chain (DLIC); InterPro: IPR022780 This entry consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organisation, and function of centrosomes and mitotic spindles when bound to pericentrin [, ]. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organisation by binding cytoplasmic dynein 2 to its Golgi-associated cargo [].
Probab=26.65 E-value=1.3e+02 Score=28.35 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=23.2
Q ss_pred CCHHHHHHhHHHhHHHHHHhhCCCHHHHHHHHHHH
Q 027798 38 LTVEGILENWLKIKPVIMEEWSENREALIELSGKV 72 (218)
Q Consensus 38 ~s~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 72 (218)
|+.-+-+..|...+...+.....+++...+..++.
T Consensus 114 W~~~esL~~W~~vl~~~i~~L~~~~e~~~e~~~kl 148 (472)
T PF05783_consen 114 WNIMESLEKWLSVLREHIEKLKSDPEEREELRQKL 148 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 66666778898888888877666655544443333
No 261
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=26.08 E-value=1.5e+02 Score=22.54 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=30.5
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchHH---------------HHHHHHHhcCCCCCCCeeE
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSRF---------------VETLLRELAGVTITPDRLY 134 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~~---------------~~~~L~~~~gl~~~fd~i~ 134 (218)
.+.+++.+.|+.+ |..+.++|+.+... +...|++ .++ .+|.++
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-~~i--pYd~l~ 84 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-HNV--PYDEIY 84 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-cCC--CCceEE
Confidence 4778889999765 57999999988754 4456666 666 345554
No 262
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=25.96 E-value=3e+02 Score=21.38 Aligned_cols=78 Identities=12% Similarity=0.055 Sum_probs=44.7
Q ss_pred CCCcccHHHHHH---hcCCCEEEEeCCch-HHHHHHHHHhcCCCCC---------CCeeEeCCCCChHHHHHHhhhcCCC
Q 027798 88 NRLYPGVSDALK---LASSRIYIVTSNQS-RFVETLLRELAGVTIT---------PDRLYGLGTGPKVNVLKQLQKKPEH 154 (218)
Q Consensus 88 ~~l~~gv~e~L~---~L~~~l~IvTn~~~-~~~~~~L~~~~gl~~~---------fd~i~~~~~~pKPe~l~~l~~~~~~ 154 (218)
...|+++...|. .+|..++++|++.. +.+...|+. +.+..- |+.+.-.+ +.|=..+..+-...+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk~~Gvlkps~e~ft~~~~g~-gsklghfke~~n~s~~ 120 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVKQTGVLKPSLEEFTFEAVGD-GSKLGHFKEFTNNSNS 120 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccCcccccchhhhcCceeeecC-cccchhHHHHhhccCc
Confidence 456776666555 45789999997764 577888988 776532 33222222 1344455555433333
Q ss_pred CCCceEEEcCchh
Q 027798 155 QGLRLHFVEDRLA 167 (218)
Q Consensus 155 ~~~e~l~IGDs~~ 167 (218)
.-.+..+..|-..
T Consensus 121 ~~k~~~~fdDesr 133 (144)
T KOG4549|consen 121 IEKNKQVFDDESR 133 (144)
T ss_pred chhceeeeccccc
Confidence 3334666776543
No 263
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=25.74 E-value=1.3e+02 Score=21.54 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=23.2
Q ss_pred eEEE-cCchhhHHhccccccccCccEEEEeCCCCCHHH
Q 027798 159 LHFV-EDRLATLKNVIKEPELDGWNLYLVDWGYNTPKE 195 (218)
Q Consensus 159 ~l~I-GDs~~Di~aA~~~~~~aGi~~i~v~~G~~~~~~ 195 (218)
++.+ ||+..=+.+| -.+|+.++-++.|....++
T Consensus 43 lvIt~gdR~di~~~a----~~~~i~~iIltg~~~~~~~ 76 (105)
T PF07085_consen 43 LVITPGDREDIQLAA----IEAGIACIILTGGLEPSEE 76 (105)
T ss_dssp EEEEETT-HHHHHHH----CCTTECEEEEETT----HH
T ss_pred EEEEeCCcHHHHHHH----HHhCCCEEEEeCCCCCCHH
Confidence 6777 9998888888 8999999988888765544
No 264
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=25.57 E-value=3.4e+02 Score=21.50 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=53.1
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCchH---HHHHHHHHhc---CCCCCCCe-eEeC----------CCC-ChHH----
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQSR---FVETLLRELA---GVTITPDR-LYGL----------GTG-PKVN---- 143 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~~---~~~~~L~~~~---gl~~~fd~-i~~~----------~~~-pKPe---- 143 (218)
...+|+.++...+ |+++.=+|+.+-. .++.-|.. . |. .+.+. ++.+ |.. .+|+
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 3668999988765 6788888988854 33444444 3 21 22222 3333 222 5676
Q ss_pred -HHHHhhhc-CCCCCCceEEEcCchhhHHhccccccccCccE
Q 027798 144 -VLKQLQKK-PEHQGLRLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 144 -~l~~l~~~-~~~~~~e~l~IGDs~~Di~aA~~~~~~aGi~~ 183 (218)
+|+.+... |.....=..-+|.+.+|+.+= +++|++.
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY----~~vGip~ 142 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAY----KAVGIPK 142 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHH----HHcCCCh
Confidence 66665432 101111145589999999999 9999953
No 265
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=25.35 E-value=2.5e+02 Score=23.78 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=50.9
Q ss_pred CCCEEEEeCCch--HHHHHHHHHhcCCCCCCCeeEeCCCC-----ChHH-----HHHHhhhcCCCCCCceEEEcCch-hh
Q 027798 102 SSRIYIVTSNQS--RFVETLLRELAGVTITPDRLYGLGTG-----PKVN-----VLKQLQKKPEHQGLRLHFVEDRL-AT 168 (218)
Q Consensus 102 ~~~l~IvTn~~~--~~~~~~L~~~~gl~~~fd~i~~~~~~-----pKPe-----~l~~l~~~~~~~~~e~l~IGDs~-~D 168 (218)
+.+++|+|+..+ ..++..++. +|+.+.--.|.+.+-. ..|+ ........-.++..|++..|=.- .+
T Consensus 109 grrfsViTtt~rs~~il~~lv~~-~g~s~~~~~vrstdl~vL~l~~~~~~~~~~l~~~~~~a~~edgAeaIiLGCAGms~ 187 (230)
T COG4126 109 GRRFSVITTTERSRPILEELVRS-YGLSRHCRSVRSTDLPVLALEGPPEEAEALLVIEAAEALKEDGAEAIILGCAGMSD 187 (230)
T ss_pred cceEEEEecCcccHHHHHHHHHh-cCccccccceeeCCCCcccccCChHHHHHHHHHHHHHHhhhcCCCEEEEcCccHHH
Confidence 679999998765 467888899 9998665556665522 3343 22222223345666799998774 56
Q ss_pred HHhccccccccCccEE
Q 027798 169 LKNVIKEPELDGWNLY 184 (218)
Q Consensus 169 i~aA~~~~~~aGi~~i 184 (218)
+.. +.++.-|+++|
T Consensus 188 la~--~Lq~~~gvPVI 201 (230)
T COG4126 188 LAD--QLQKAFGVPVI 201 (230)
T ss_pred HHH--HHHHHhCCCcc
Confidence 633 34478887765
No 266
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=23.19 E-value=4.6e+02 Score=22.11 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=51.8
Q ss_pred CcccHHHHHHhcCC-CEEEEeCCchHHHHHH---HHHhcCCCC----CCCeeEeCCCC-ChHHHHHHhhhcCCCCCCceE
Q 027798 90 LYPGVSDALKLASS-RIYIVTSNQSRFVETL---LRELAGVTI----TPDRLYGLGTG-PKVNVLKQLQKKPEHQGLRLH 160 (218)
Q Consensus 90 l~~gv~e~L~~L~~-~l~IvTn~~~~~~~~~---L~~~~gl~~----~fd~i~~~~~~-pKPe~l~~l~~~~~~~~~e~l 160 (218)
+-..+.+.|+.|+. +++|+|--..+..+.+ ++. .|++- .|+.--..+.. -.|+.+..+..+-..+..++|
T Consensus 107 ~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~-~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aDAi 185 (239)
T TIGR02990 107 PSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAV-RGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDADAL 185 (239)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHh-CCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCCEE
Confidence 33456777888885 9999998776654444 344 45431 11110000111 556633333332233445689
Q ss_pred EEcCch---hhHHhccccccccCccEEEE
Q 027798 161 FVEDRL---ATLKNVIKEPELDGWNLYLV 186 (218)
Q Consensus 161 ~IGDs~---~Di~aA~~~~~~aGi~~i~v 186 (218)
||-.+- .|+...++ +..|.+++..
T Consensus 186 fisCTnLrt~~vi~~lE--~~lGkPVlsS 212 (239)
T TIGR02990 186 FLSCTALRAATCAQRIE--QAIGKPVVTS 212 (239)
T ss_pred EEeCCCchhHHHHHHHH--HHHCCCEEEH
Confidence 998873 36666644 6678888653
No 267
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=22.91 E-value=5.4e+02 Score=24.41 Aligned_cols=23 Identities=4% Similarity=-0.128 Sum_probs=17.2
Q ss_pred EEEcCchhhHHhccccccccCccEEEEe
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYLVD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~v~ 187 (218)
++||.+.- -..| +..|++.+-+.
T Consensus 440 lliG~s~~-k~~a----~~~giPlir~g 462 (515)
T TIGR01286 440 FLIGNSYG-KYIQ----RDTLVPLIRIG 462 (515)
T ss_pred EEEECchH-HHHH----HHcCCCEEEec
Confidence 88999854 5566 78999887554
No 268
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=22.89 E-value=69 Score=26.48 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=20.1
Q ss_pred cCCCcccHHHHHHhcC----CCEEEEeCCchHHHHHH
Q 027798 87 ANRLYPGVSDALKLAS----SRIYIVTSNQSRFVETL 119 (218)
Q Consensus 87 ~~~l~~gv~e~L~~L~----~~l~IvTn~~~~~~~~~ 119 (218)
...+.+++.++|+.|. ..++|+|+.+.+..+..
T Consensus 17 ~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 17 AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 3467899999999883 36999999998884444
No 269
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=22.29 E-value=1.3e+02 Score=27.59 Aligned_cols=25 Identities=28% Similarity=0.542 Sum_probs=20.2
Q ss_pred CCcccHHHHHHhc---CCCEEEEeCCch
Q 027798 89 RLYPGVSDALKLA---SSRIYIVTSNQS 113 (218)
Q Consensus 89 ~l~~gv~e~L~~L---~~~l~IvTn~~~ 113 (218)
.+||-+..-|+.| |+.++|.||+..
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~ 131 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNG 131 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccc
Confidence 5788888888887 568999998764
No 270
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=21.87 E-value=3.8e+02 Score=23.71 Aligned_cols=57 Identities=14% Similarity=0.014 Sum_probs=31.8
Q ss_pred CeeEeCCCCChHHHHHHhhhcCCCCCCceEEEcCchhhHH-hccccccccCccEEEEeCCCCCHHHHHhhc
Q 027798 131 DRLYGLGTGPKVNVLKQLQKKPEHQGLRLHFVEDRLATLK-NVIKEPELDGWNLYLVDWGYNTPKERAEAA 200 (218)
Q Consensus 131 d~i~~~~~~pKPe~l~~l~~~~~~~~~e~l~IGDs~~Di~-aA~~~~~~aGi~~i~v~~G~~~~~~l~~~~ 200 (218)
+.+...+..+..+.+..+... .++||||. +|+ -| -..|.+++-+... +.+++....+
T Consensus 239 ~~v~~~~~l~~~~~l~ll~~a-------~~vvgdSs-GI~eEa----~~lg~P~v~iR~~-geRqe~r~~~ 296 (346)
T PF02350_consen 239 DNVRLIEPLGYEEYLSLLKNA-------DLVVGDSS-GIQEEA----PSLGKPVVNIRDS-GERQEGRERG 296 (346)
T ss_dssp TTEEEE----HHHHHHHHHHE-------SEEEESSH-HHHHHG----GGGT--EEECSSS--S-HHHHHTT
T ss_pred CCEEEECCCCHHHHHHHHhcc-------eEEEEcCc-cHHHHH----HHhCCeEEEecCC-CCCHHHHhhc
Confidence 344444433555666666532 58999999 998 88 8999999988332 2344443333
No 271
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=21.72 E-value=1.1e+02 Score=26.13 Aligned_cols=36 Identities=8% Similarity=0.149 Sum_probs=27.9
Q ss_pred CCcccHHHHHHhc----CCCEEEEeCCchHHHHHHHHHhcC
Q 027798 89 RLYPGVSDALKLA----SSRIYIVTSNQSRFVETLLRELAG 125 (218)
Q Consensus 89 ~l~~gv~e~L~~L----~~~l~IvTn~~~~~~~~~L~~~~g 125 (218)
.+.+.+.+.|+.| +..++|+|+.+...+...++. ++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~-~~ 75 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKP-YR 75 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc-cc
Confidence 4567788888876 347999999999988887765 54
No 272
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=20.63 E-value=29 Score=29.95 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=58.4
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHHhcCC-CCCCCeeEeCCCC-ChH-H---HHHHhhhcCCCCCCce
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRELAGV-TITPDRLYGLGTG-PKV-N---VLKQLQKKPEHQGLRL 159 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~~~gl-~~~fd~i~~~~~~-pKP-e---~l~~l~~~~~~~~~e~ 159 (218)
+.-.|++.++|...+ ..+.+.|.....++..+++. +.= ...|..-+-++.- -++ . -+..++. +..++
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~-LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~----dL~~v 204 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDI-LDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGR----DLSKV 204 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHH-ccCCCCeeeeeecccceEeECCcEEEEcceecc----CcccE
Confidence 346699999999986 48889999999999999988 543 2233322222211 111 1 1122232 33449
Q ss_pred EEEcCchhhHHhccccccccCccEEE
Q 027798 160 HFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 160 l~IGDs~~Di~aA~~~~~~aGi~~i~ 185 (218)
++|+|++.-...= -.+|++.-.
T Consensus 205 iIiDNsP~sy~~~----p~NgIpI~s 226 (262)
T KOG1605|consen 205 IIVDNSPQSYRLQ----PENGIPIKS 226 (262)
T ss_pred EEEcCChHHhccC----ccCCCcccc
Confidence 9999999988887 788887644
No 273
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=20.53 E-value=85 Score=25.31 Aligned_cols=27 Identities=11% Similarity=-0.034 Sum_probs=24.7
Q ss_pred eEEEcCchhhHHhccccccccCccEEEEeCC
Q 027798 159 LHFVEDRLATLKNVIKEPELDGWNLYLVDWG 189 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~~~~~~aGi~~i~v~~G 189 (218)
-++||.+.+....| -..|++++++.|.
T Consensus 259 ~~~Is~RlH~~I~a----~~~g~P~i~i~y~ 285 (286)
T PF04230_consen 259 DLVISMRLHGAILA----LSLGVPVIAISYD 285 (286)
T ss_pred CEEEecCCHHHHHH----HHcCCCEEEEecC
Confidence 48999999999999 9999999999874
No 274
>PLN02580 trehalose-phosphatase
Probab=20.39 E-value=1.2e+02 Score=27.72 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=28.6
Q ss_pred CCCcccHHHHHHhcC--CCEEEEeCCchHHHHHHHHH
Q 027798 88 NRLYPGVSDALKLAS--SRIYIVTSNQSRFVETLLRE 122 (218)
Q Consensus 88 ~~l~~gv~e~L~~L~--~~l~IvTn~~~~~~~~~L~~ 122 (218)
..+-|++.++|+.|. .+++|||+.+...++..+.-
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 456688999999884 48999999999998877653
No 275
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=20.04 E-value=3.2e+02 Score=22.95 Aligned_cols=71 Identities=20% Similarity=0.213 Sum_probs=46.8
Q ss_pred CCcccHH----HHHHhcCCCEEEEeCCchH-----HHHHHHHHhcCCCCCCCeeEeCCCC-ChHH---HHHHhhhcCCCC
Q 027798 89 RLYPGVS----DALKLASSRIYIVTSNQSR-----FVETLLRELAGVTITPDRLYGLGTG-PKVN---VLKQLQKKPEHQ 155 (218)
Q Consensus 89 ~l~~gv~----e~L~~L~~~l~IvTn~~~~-----~~~~~L~~~~gl~~~fd~i~~~~~~-pKPe---~l~~l~~~~~~~ 155 (218)
.+.|++. +.+++-+.+..|+.+.... .++..++. +|+.-.|..++|+-.. .+|. .++.+|. |..
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~-~gi~~~~P~~~CsL~~~~~p~i~~F~~~fGk-P~~- 135 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEE-FGIEVEFPKPFCSLEENGNPQIDEFAEYFGK-PKV- 135 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHh-cCceeecCccccccCCCCChhHHHHHHHhCC-ceE-
Confidence 4556654 3333345687788777666 88999999 9999889888887432 3443 6777773 444
Q ss_pred CCceEEEcCc
Q 027798 156 GLRLHFVEDR 165 (218)
Q Consensus 156 ~~e~l~IGDs 165 (218)
=+.|+|.
T Consensus 136 ---ei~v~~~ 142 (217)
T PF02593_consen 136 ---EIEVENG 142 (217)
T ss_pred ---EEEecCC
Confidence 4555554
No 276
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.02 E-value=5e+02 Score=23.81 Aligned_cols=83 Identities=16% Similarity=0.028 Sum_probs=51.7
Q ss_pred CEEEEeCCch--HHHHHHHHHhcCCC-CCCCeeEeCCCCChHH----HHHHhh-hcCCCCCCceEEEcCchhhHH---hc
Q 027798 104 RIYIVTSNQS--RFVETLLRELAGVT-ITPDRLYGLGTGPKVN----VLKQLQ-KKPEHQGLRLHFVEDRLATLK---NV 172 (218)
Q Consensus 104 ~l~IvTn~~~--~~~~~~L~~~~gl~-~~fd~i~~~~~~pKPe----~l~~l~-~~~~~~~~e~l~IGDs~~Di~---aA 172 (218)
...|+|+..+ +.....++. +++. .-++.-+.-+...--+ ++..+. +-.+++|+-+++=||+.+-+. +|
T Consensus 34 ~~vi~TGQH~d~em~~~~le~-~~i~~pdy~L~i~~~~~tl~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa 112 (383)
T COG0381 34 LIVIHTGQHRDYEMLDQVLEL-FGIRKPDYDLNIMKPGQTLGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAA 112 (383)
T ss_pred eEEEEecccccHHHHHHHHHH-hCCCCCCcchhccccCCCHHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH
Confidence 6788998888 899999998 9998 5555444422221122 222221 111334444999999976444 55
Q ss_pred cccccccCccEEEEeCCCC
Q 027798 173 IKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 173 ~~~~~~aGi~~i~v~~G~~ 191 (218)
....+++..|--|-.
T Consensus 113 ----~~~~IpV~HvEAGlR 127 (383)
T COG0381 113 ----FYLKIPVGHVEAGLR 127 (383)
T ss_pred ----HHhCCceEEEecccc
Confidence 677888888865544
No 277
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY).
Probab=20.01 E-value=91 Score=28.42 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=23.1
Q ss_pred EEEcCc--------hhhHHhccccccccCccEEEEeCCCC
Q 027798 160 HFVEDR--------LATLKNVIKEPELDGWNLYLVDWGYN 191 (218)
Q Consensus 160 l~IGDs--------~~Di~aA~~~~~~aGi~~i~v~~G~~ 191 (218)
.|||.+ ..||+.| +++||+..++..|..
T Consensus 6 ~mvgn~~~yt~~dw~~di~~A----~~~GIDgFaLNig~~ 41 (386)
T PF03659_consen 6 FMVGNTYNYTQEDWEADIRLA----QAAGIDGFALNIGSS 41 (386)
T ss_pred EEeeccCCCCHHHHHHHHHHH----HHcCCCEEEEecccC
Confidence 466665 5799999 999999999999844
Done!