BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027800
MTPNYHLSPVTPFPLELKEDQLLNLNQPPSSSSPASCHNFFEPVQREGGFYYRESVLLRH
PKEVRILYSQAAGSCDHPGPAVMDESGSESTGLKLSMSSEKEERNDQNQSENSSSVKWMS
SKMRLMKKMMYSSPDAAAMQKLEDHQKQPPSSSLEPDNGNNNNNTNTIRVCADCNTTKTP
LWRSGPRGPKVTKLILSIEKLPMLVFFFCVYIINSLFY

High Scoring Gene Products

Symbol, full name Information P value
GNC
AT5G56860
protein from Arabidopsis thaliana 2.6e-07
CGA1
AT4G26150
protein from Arabidopsis thaliana 3.2e-07
GATA23
AT5G26930
protein from Arabidopsis thaliana 8.6e-06
GATA16
AT5G49300
protein from Arabidopsis thaliana 3.9e-05
GATA17
AT3G16870
protein from Arabidopsis thaliana 6.6e-05
GATA19
AT4G36620
protein from Arabidopsis thaliana 0.00044
MNP
AT3G50870
protein from Arabidopsis thaliana 0.00098

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027800
        (218 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2170277 - symbol:GNC "GATA, nitrate-inducible,...   131  2.6e-07   1
TAIR|locus:2120845 - symbol:CGA1 "cytokinin-responsive ga...   130  3.2e-07   1
TAIR|locus:2148558 - symbol:GATA23 "GATA transcription fa...   104  8.6e-06   1
TAIR|locus:2155919 - symbol:GATA16 "GATA transcription fa...   101  3.9e-05   1
TAIR|locus:2093678 - symbol:GATA17 "GATA transcription fa...    97  6.6e-05   2
TAIR|locus:2115195 - symbol:GATA19 "GATA transcription fa...   105  0.00044   1
TAIR|locus:2077932 - symbol:MNP "MONOPOLE" species:3702 "...   105  0.00098   1


>TAIR|locus:2170277 [details] [associations]
            symbol:GNC "GATA, nitrate-inducible, carbon
            metabolism-involved" species:3702 "Arabidopsis thaliana"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0010255 "glucose mediated signaling pathway" evidence=IMP]
            [GO:0051171 "regulation of nitrogen compound metabolic process"
            evidence=IEP;IMP] [GO:0007623 "circadian rhythm" evidence=IEP]
            [GO:0009416 "response to light stimulus" evidence=IEP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0009740 "gibberellic acid
            mediated signaling pathway" evidence=IEP] [GO:0009910 "negative
            regulation of flower development" evidence=IMP] [GO:0010187
            "negative regulation of seed germination" evidence=IEP] [GO:0010380
            "regulation of chlorophyll biosynthetic process" evidence=IMP]
            [GO:0010468 "regulation of gene expression" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
            PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0007623 GO:GO:0043565
            GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
            GO:GO:0010380 GO:GO:0044212 GO:GO:0010187 GO:GO:0009416
            GO:GO:0009910 EMBL:AB020747 GO:GO:0009740 EMBL:AY065074
            EMBL:BT020488 IPI:IPI00532510 IPI:IPI00552033 RefSeq:NP_200497.1
            UniGene:At.28597 UniGene:At.69367 ProteinModelPortal:Q5HZ36
            SMR:Q5HZ36 IntAct:Q5HZ36 STRING:Q5HZ36 EnsemblPlants:AT5G56860.1
            GeneID:835788 KEGG:ath:AT5G56860 GeneFarm:3914 TAIR:At5g56860
            eggNOG:NOG275546 HOGENOM:HOG000238913 InParanoid:Q5HZ36 OMA:YNTINEN
            PhylomeDB:Q5HZ36 ProtClustDB:CLSN2685908 Genevestigator:Q5HZ36
            GermOnline:AT5G56860 GO:GO:0010255 Uniprot:Q5HZ36
        Length = 398

 Score = 131 (51.2 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 22/23 (95%), Positives = 23/23 (100%)

Query:   168 IRVCADCNTTKTPLWRSGPRGPK 190
             IRVC+DCNTTKTPLWRSGPRGPK
Sbjct:   229 IRVCSDCNTTKTPLWRSGPRGPK 251


>TAIR|locus:2120845 [details] [associations]
            symbol:CGA1 "cytokinin-responsive gata factor 1"
            species:3702 "Arabidopsis thaliana" [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA;ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
            evidence=IEP] [GO:0007623 "circadian rhythm" evidence=IEP]
            [GO:0009416 "response to light stimulus" evidence=IEP] [GO:0009740
            "gibberellic acid mediated signaling pathway" evidence=IEP]
            [GO:0009910 "negative regulation of flower development"
            evidence=IMP] [GO:0010187 "negative regulation of seed germination"
            evidence=IEP] [GO:0010380 "regulation of chlorophyll biosynthetic
            process" evidence=IMP] [GO:0010468 "regulation of gene expression"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] InterPro:IPR000679 InterPro:IPR013088
            Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735
            EMBL:AL161564 GO:GO:0046872 GO:GO:0007623 GO:GO:0043565
            GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
            GO:GO:0010380 EMBL:AL049483 GO:GO:0044212 GO:GO:0010187
            GO:GO:0009416 GO:GO:0009910 GO:GO:0009740 HOGENOM:HOG000238913
            ProtClustDB:CLSN2685908 IPI:IPI00545845 PIR:T04270
            RefSeq:NP_194345.1 UniGene:At.32205 ProteinModelPortal:Q9SZI6
            SMR:Q9SZI6 PRIDE:Q9SZI6 EnsemblPlants:AT4G26150.1 GeneID:828721
            KEGG:ath:AT4G26150 GeneFarm:3910 TAIR:At4g26150 eggNOG:NOG276294
            InParanoid:Q9SZI6 OMA:NDCVIRI PhylomeDB:Q9SZI6 ArrayExpress:Q9SZI6
            Genevestigator:Q9SZI6 GermOnline:AT4G26150 Uniprot:Q9SZI6
        Length = 352

 Score = 130 (50.8 bits), Expect = 3.2e-07, P = 3.2e-07
 Identities = 21/23 (91%), Positives = 23/23 (100%)

Query:   168 IRVCADCNTTKTPLWRSGPRGPK 190
             IR+C+DCNTTKTPLWRSGPRGPK
Sbjct:   198 IRICSDCNTTKTPLWRSGPRGPK 220


>TAIR|locus:2148558 [details] [associations]
            symbol:GATA23 "GATA transcription factor 23" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0009416 "response to light stimulus"
            evidence=IEP] [GO:0048527 "lateral root development" evidence=IMP]
            InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
            PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
            Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
            GO:GO:0009416 EMBL:AF007270 HOGENOM:HOG000237836 EMBL:DQ446989
            EMBL:DQ653310 EMBL:BT024789 EMBL:AY086778 IPI:IPI00517378
            PIR:T01770 RefSeq:NP_198045.1 UniGene:At.30837
            ProteinModelPortal:Q8LC59 SMR:Q8LC59 EnsemblPlants:AT5G26930.1
            GeneID:832751 KEGG:ath:AT5G26930 GeneFarm:3912 TAIR:At5g26930
            eggNOG:NOG243746 InParanoid:Q8LC59 OMA:HGGVAVK PhylomeDB:Q8LC59
            ProtClustDB:CLSN2916567 Genevestigator:Q8LC59 Uniprot:Q8LC59
        Length = 120

 Score = 104 (41.7 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query:   168 IRVCADCNTTKTPLWRSGPRGPK 190
             IR C++C TTKTP+WR GP GPK
Sbjct:    25 IRCCSECKTTKTPMWRGGPTGPK 47


>TAIR|locus:2155919 [details] [associations]
            symbol:GATA16 "GATA transcription factor 16" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320
            PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0043565
            GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
            EMBL:AB016872 eggNOG:NOG70483 HOGENOM:HOG000237836 EMBL:BT029338
            IPI:IPI00537074 RefSeq:NP_199741.1 UniGene:At.55451
            ProteinModelPortal:Q9FJ10 SMR:Q9FJ10 PaxDb:Q9FJ10 PRIDE:Q9FJ10
            EnsemblPlants:AT5G49300.1 GeneID:834990 KEGG:ath:AT5G49300
            GeneFarm:3913 TAIR:At5g49300 InParanoid:Q9FJ10 OMA:ACTECHT
            PhylomeDB:Q9FJ10 ProtClustDB:CLSN2916480 Genevestigator:Q9FJ10
            Uniprot:Q9FJ10
        Length = 139

 Score = 101 (40.6 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 16/22 (72%), Positives = 18/22 (81%)

Query:   169 RVCADCNTTKTPLWRSGPRGPK 190
             + CADC T+KTPLWR GP GPK
Sbjct:    36 KTCADCGTSKTPLWRGGPVGPK 57


>TAIR|locus:2093678 [details] [associations]
            symbol:GATA17 "GATA transcription factor 17" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0006857 "oligopeptide transport" evidence=RCA]
            [GO:0009407 "toxin catabolic process" evidence=RCA]
            InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320 PROSITE:PS00344
            PROSITE:PS50114 SMART:SM00401 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
            Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351 EMBL:AP001308
            HOGENOM:HOG000237836 EMBL:BT010844 EMBL:BT012611 IPI:IPI00522895
            RefSeq:NP_188312.1 UniGene:At.38827 ProteinModelPortal:Q9LIB5
            SMR:Q9LIB5 EnsemblPlants:AT3G16870.1 GeneID:820942
            KEGG:ath:AT3G16870 GeneFarm:3907 TAIR:At3g16870 eggNOG:NOG301193
            InParanoid:Q9LIB5 OMA:TIRTPLW PhylomeDB:Q9LIB5
            ProtClustDB:CLSN2684177 Genevestigator:Q9LIB5 GermOnline:AT3G16870
            Uniprot:Q9LIB5
        Length = 190

 Score = 97 (39.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
 Identities = 15/22 (68%), Positives = 16/22 (72%)

Query:   169 RVCADCNTTKTPLWRSGPRGPK 190
             R C DC T +TPLWR GP GPK
Sbjct:    42 RTCVDCGTIRTPLWRGGPAGPK 63

 Score = 45 (20.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query:    83 MDESGSESTGLKLSMSSEKEERNDQNQSENSS 114
             M E GSE T  KL  + E  + +++N S + S
Sbjct:     1 MSE-GSEDTKTKLDSAGELSDVDNENCSSSGS 31


>TAIR|locus:2115195 [details] [associations]
            symbol:GATA19 "GATA transcription factor 19" species:3702
            "Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR000679 InterPro:IPR013088 Pfam:PF00320
            PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0043565
            GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
            EMBL:AL161589 EMBL:Z99708 HOGENOM:HOG000238145 EMBL:BT029506
            EMBL:AY530746 IPI:IPI00527696 PIR:D85432 RefSeq:NP_195380.1
            UniGene:At.54634 ProteinModelPortal:Q6QPM2 SMR:Q6QPM2
            EnsemblPlants:AT4G36620.1 GeneID:829814 KEGG:ath:AT4G36620
            GeneFarm:3911 TAIR:At4g36620 eggNOG:NOG241947 InParanoid:Q6QPM2
            OMA:ANNEYSY PhylomeDB:Q6QPM2 ProtClustDB:CLSN2915913
            ArrayExpress:Q6QPM2 Genevestigator:Q6QPM2 GermOnline:AT4G36620
            Uniprot:Q6QPM2
        Length = 211

 Score = 105 (42.0 bits), Expect = 0.00044, P = 0.00044
 Identities = 17/22 (77%), Positives = 20/22 (90%)

Query:   169 RVCADCNTTKTPLWRSGPRGPK 190
             R CA+C+TT TPLWR+GPRGPK
Sbjct:    75 RRCANCDTTSTPLWRNGPRGPK 96


>TAIR|locus:2077932 [details] [associations]
            symbol:MNP "MONOPOLE" species:3702 "Arabidopsis thaliana"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;IEP] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0009909 "regulation of flower development" evidence=IGI]
            [GO:0009790 "embryo development" evidence=IMP] [GO:0048446 "petal
            morphogenesis" evidence=RCA] InterPro:IPR000679 InterPro:IPR013088
            Pfam:PF00320 PROSITE:PS00344 PROSITE:PS50114 SMART:SM00401
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
            GO:GO:0006351 GO:GO:0009790 GO:GO:0009909 EMBL:AL049862
            EMBL:AY086746 IPI:IPI00538242 PIR:T08408 RefSeq:NP_566939.1
            UniGene:At.27761 ProteinModelPortal:Q8LC79 SMR:Q8LC79
            EnsemblPlants:AT3G50870.1 GeneID:824251 KEGG:ath:AT3G50870
            GeneFarm:3909 TAIR:At3g50870 eggNOG:NOG315232 HOGENOM:HOG000238145
            InParanoid:Q8LC79 OMA:YPANEIR PhylomeDB:Q8LC79
            ProtClustDB:CLSN2917410 Genevestigator:Q8LC79 GermOnline:AT3G50870
            Uniprot:Q8LC79
        Length = 295

 Score = 105 (42.0 bits), Expect = 0.00098, P = 0.00098
 Identities = 17/22 (77%), Positives = 20/22 (90%)

Query:   169 RVCADCNTTKTPLWRSGPRGPK 190
             R CA+C+TT TPLWR+GPRGPK
Sbjct:   152 RRCANCDTTSTPLWRNGPRGPK 173


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      218       182   0.00098  109 3  11 22  0.47    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  164 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.57u 0.13s 18.70t   Elapsed:  00:00:01
  Total cpu time:  18.57u 0.13s 18.70t   Elapsed:  00:00:01
  Start:  Sat May 11 09:52:06 2013   End:  Sat May 11 09:52:07 2013

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