Your job contains 1 sequence.
>027801
MALNLKTTIHHSPLASSSRQFINGFSPKPTSMSFSRSSSLKGFGTQIAIERKERLSFVQT
EAVRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSF
EIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLT
CDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027801
(218 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2051739 - symbol:COS1 "AT2G44050" species:3702... 789 1.8e-78 1
TIGR_CMR|BA_4334 - symbol:BA_4334 "6,7-dimethyl-8-ribityl... 402 1.9e-37 1
TIGR_CMR|DET_1187 - symbol:DET_1187 "6,7-dimethyl-8-ribit... 402 1.9e-37 1
TIGR_CMR|CHY_1472 - symbol:CHY_1472 "6,7-dimethyl-8-ribit... 382 2.4e-35 1
TIGR_CMR|GSU_1691 - symbol:GSU_1691 "6,7-dimethyl-8-ribit... 371 3.6e-34 1
UNIPROTKB|P61714 - symbol:ribE "RibE" species:83333 "Esch... 363 2.5e-33 1
TIGR_CMR|CPS_1531 - symbol:CPS_1531 "6,7-dimethyl-8-ribit... 333 3.8e-30 1
TIGR_CMR|CJE_0432 - symbol:CJE_0432 "6,7-dimethyl-8-ribit... 332 4.9e-30 1
TIGR_CMR|VC_2268 - symbol:VC_2268 "6,7-dimethyl-8-ribityl... 330 7.9e-30 1
TIGR_CMR|SO_3466 - symbol:SO_3466 "6,7-dimethyl-8-ribityl... 322 5.6e-29 1
TIGR_CMR|CBU_0648 - symbol:CBU_0648 "6,7-dimethyl-8-ribit... 304 4.5e-27 1
POMBASE|SPBC409.13 - symbol:SPBC409.13 "6,7-dimethyl-8-ri... 239 3.5e-20 1
TIGR_CMR|ECH_0783 - symbol:ECH_0783 "6,7-dimethyl-8-ribit... 212 2.5e-17 1
SGD|S000005503 - symbol:RIB4 "Lumazine synthase (DMRL syn... 197 9.8e-16 1
UNIPROTKB|P66034 - symbol:ribH "6,7-dimethyl-8-ribityllum... 196 1.3e-15 1
TIGR_CMR|APH_0539 - symbol:APH_0539 "6,7-dimethyl-8-ribit... 171 5.6e-13 1
TIGR_CMR|SPO_0268 - symbol:SPO_0268 "riboflavin synthase,... 171 5.6e-13 1
TIGR_CMR|SPO_1762 - symbol:SPO_1762 "6,7-dimethyl-8-ribit... 155 2.8e-11 1
TIGR_CMR|NSE_0401 - symbol:NSE_0401 "6,7-dimethyl-8-ribit... 146 2.5e-10 1
ASPGD|ASPL0000028987 - symbol:riboG species:162425 "Emeri... 148 4.7e-10 1
>TAIR|locus:2051739 [details] [associations]
symbol:COS1 "AT2G44050" species:3702 "Arabidopsis
thaliana" [GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase
activity" evidence=IGI;ISS] [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IGI;ISS] [GO:0009349 "riboflavin synthase
complex" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=IGI] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016740 EMBL:AC004005
GO:GO:0009231 GO:GO:0009867 eggNOG:COG0054 KO:K00794 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI EMBL:AF148649 EMBL:AY050913
EMBL:AY091343 IPI:IPI00529546 PIR:T00685 RefSeq:NP_181933.1
UniGene:At.11483 ProteinModelPortal:O80575 SMR:O80575 IntAct:O80575
STRING:O80575 PaxDb:O80575 PRIDE:O80575 EnsemblPlants:AT2G44050.1
GeneID:819010 KEGG:ath:AT2G44050 GeneFarm:2212 TAIR:At2g44050
HOGENOM:HOG000229249 InParanoid:O80575 PhylomeDB:O80575
ProtClustDB:PLN02404 BioCyc:MetaCyc:AT2G44050-MONOMER
Genevestigator:O80575 GermOnline:AT2G44050 InterPro:IPR017420
PIRSF:PIRSF038166 Uniprot:O80575
Length = 227
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 158/218 (72%), Positives = 184/218 (84%)
Query: 3 LNLKTTIHH--SPLASSSRQFINGFSPKPTSMSFSRSSSLKGFGTQIAIERKERLSFVQT 60
L L T H + SSS +I+G S S + S SSS GF + +A+E++ R SFVQT
Sbjct: 10 LRLIPTAHRQLNSRQSSSACYIHGGSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQT 69
Query: 61 EAVRHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSF 120
AVRH+TG L + EGLRFA+VVARFNE+VTKLLLEGA+ETFKKYSV+EE+I+V+WVPGSF
Sbjct: 70 AAVRHVTGSLIRGEGLRFAIVVARFNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSF 129
Query: 121 EIGVVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLT 180
EIGVVAQ LGKSGK+ AVLCIGAV+RGDTTHYDAVANSAASGVLSA +NSGVPCIFGVLT
Sbjct: 130 EIGVVAQNLGKSGKFHAVLCIGAVIRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLT 189
Query: 181 CDNMDQALNRAGGKSGNKGAEAALTAIEMASLFEHHLK 218
C++MDQALNR+GGK+GNKGAE ALTA+EMASLFEHHLK
Sbjct: 190 CEDMDQALNRSGGKAGNKGAETALTALEMASLFEHHLK 227
>TIGR_CMR|BA_4334 [details] [associations]
symbol:BA_4334 "6,7-dimethyl-8-ribityllumazine synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0016740
GO:GO:0009231 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
GO:GO:0009349 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI RefSeq:NP_846567.1
RefSeq:YP_020980.1 RefSeq:YP_030271.1 PDB:1VSW PDB:1VSX PDB:3JV8
PDBsum:1VSW PDBsum:1VSX PDBsum:3JV8 ProteinModelPortal:Q81MB5
SMR:Q81MB5 DNASU:1087551 EnsemblBacteria:EBBACT00000008556
EnsemblBacteria:EBBACT00000015171 EnsemblBacteria:EBBACT00000022183
GeneID:1087551 GeneID:2815209 GeneID:2850962 KEGG:ban:BA_4334
KEGG:bar:GBAA_4334 KEGG:bat:BAS4021 ProtClustDB:PRK00061
BioCyc:BANT260799:GJAJ-4078-MONOMER
BioCyc:BANT261594:GJ7F-4218-MONOMER Uniprot:Q81MB5
Length = 153
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 75/141 (53%), Positives = 103/141 (73%)
Query: 75 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGK 134
GL+ +VV RFNE +T LL GAL+ K++ V+E +IDV WVPG+FEI ++A+++ SGK
Sbjct: 11 GLKVGVVVGRFNEFITSKLLGGALDGLKRHGVEENDIDVAWVPGAFEIPLIAKKMANSGK 70
Query: 135 YTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGK 194
Y AV+ +G V+RG TTHYD V N A GV S + + +P IFGVLT + ++QA+ RAG K
Sbjct: 71 YDAVITLGTVIRGATTHYDYVCNEVAKGVASLSLQTDIPVIFGVLTTETIEQAIERAGTK 130
Query: 195 SGNKGAEAALTAIEMASLFEH 215
+GNKG E+A+ AIEMA L +H
Sbjct: 131 AGNKGYESAVAAIEMAHLSKH 151
>TIGR_CMR|DET_1187 [details] [associations]
symbol:DET_1187 "6,7-dimethyl-8-ribityllumazine synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 HSSP:Q9UUB1
RefSeq:YP_181900.1 ProteinModelPortal:Q3Z799 SMR:Q3Z799
STRING:Q3Z799 GeneID:3229536 KEGG:det:DET1187 PATRIC:21609409
BioCyc:DETH243164:GJNF-1188-MONOMER Uniprot:Q3Z799
Length = 155
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 73/152 (48%), Positives = 112/152 (73%)
Query: 64 RHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIG 123
+ +G L +GL+ ALVV+RFNE +T LL GA ++ +++ V +N DV WVPG+FEI
Sbjct: 3 KEFSGVLN-GQGLKVALVVSRFNEFITSKLLSGAKDSLERHGVSADNTDVAWVPGAFEIP 61
Query: 124 VVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDN 183
+VAQ+L KSG+Y AV+C+GAV+RG T H++ V++ + G+ G+++ +P IFGV+T D+
Sbjct: 62 LVAQKLAKSGRYDAVICLGAVIRGSTPHFEYVSSEVSKGIARVGLDASLPVIFGVITADS 121
Query: 184 MDQALNRAGGKSGNKGAEAALTAIEMASLFEH 215
++QA+ RAG K GNKG +AA AIE+A+L ++
Sbjct: 122 IEQAIERAGTKMGNKGFDAATQAIEVANLMKN 153
>TIGR_CMR|CHY_1472 [details] [associations]
symbol:CHY_1472 "6,7-dimethyl-8-ribityllumazine synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISS] [GO:0009231 "riboflavin biosynthetic process"
evidence=ISS] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0016740 GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI HOGENOM:HOG000229249
RefSeq:YP_360304.1 ProteinModelPortal:Q3AC30 SMR:Q3AC30
STRING:Q3AC30 GeneID:3727825 KEGG:chy:CHY_1472 PATRIC:21276075
BioCyc:CHYD246194:GJCN-1471-MONOMER Uniprot:Q3AC30
Length = 152
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 72/141 (51%), Positives = 103/141 (73%)
Query: 74 EGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSG 133
+GL+ ++V+RFNE +T+ LL GAL+ ++ V+ NIDV+WVPG+FEI +VA++
Sbjct: 11 KGLKIGIIVSRFNEFITQKLLAGALDCLTRHEVENTNIDVIWVPGAFEIPLVAKRAVHKD 70
Query: 134 KYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGG 193
Y A++C+GAV+RG T H+D VA A G+ + G+ + P IFGVLT D ++QA+ RAG
Sbjct: 71 -YDAIICLGAVIRGATPHFDYVAAEVAKGIAAVGLEANKPVIFGVLTTDTIEQAIERAGT 129
Query: 194 KSGNKGAEAALTAIEMASLFE 214
K+GNKG EAAL AIEMA+LF+
Sbjct: 130 KAGNKGWEAALAAIEMANLFK 150
>TIGR_CMR|GSU_1691 [details] [associations]
symbol:GSU_1691 "6,7-dimethyl-8-ribityllumazine synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009231
eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794 GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 OMA:GRFNSFI ProtClustDB:PRK00061
RefSeq:NP_952742.1 ProteinModelPortal:P61723 SMR:P61723
GeneID:2687086 KEGG:gsu:GSU1691 PATRIC:22026231
BioCyc:GSUL243231:GH27-1721-MONOMER Uniprot:P61723
Length = 155
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 73/150 (48%), Positives = 104/150 (69%)
Query: 64 RHLTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIG 123
R + G L GLRF ++V+RFN + + LLEGAL+ ++ + +IDVV VPG+FEI
Sbjct: 3 RFIEGKLDAT-GLRFGIIVSRFNSFIGERLLEGALDALVRHGGDDGDIDVVRVPGAFEIP 61
Query: 124 VVAQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDN 183
+ AQ+L + G Y AV+C+GAV+RG T H+D VA + G+ + +GVP +FGVLT D
Sbjct: 62 LTAQKLVQKGNYDAVICLGAVIRGSTPHFDYVAAEVSKGIAHVSLATGVPVVFGVLTTDT 121
Query: 184 MDQALNRAGGKSGNKGAEAALTAIEMASLF 213
++QA+ RAG K+GNKG +AA+TAIE A L+
Sbjct: 122 IEQAIERAGTKAGNKGFDAAVTAIETARLY 151
>UNIPROTKB|P61714 [details] [associations]
symbol:ribE "RibE" species:83333 "Escherichia coli K-12"
[GO:0009349 "riboflavin synthase complex" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009231 "riboflavin
biosynthetic process" evidence=IEA] [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=IDA]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016740 EMBL:U82664 GO:GO:0009231
EMBL:X64395 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 BRENDA:2.5.1.9 ProtClustDB:PRK00061 PIR:S26202
RefSeq:NP_414949.1 RefSeq:YP_488707.1 ProteinModelPortal:P61714
SMR:P61714 IntAct:P61714 MINT:MINT-1225919 SWISS-2DPAGE:P61714
PaxDb:P61714 PRIDE:P61714 EnsemblBacteria:EBESCT00000003525
EnsemblBacteria:EBESCT00000014873 GeneID:12930511 GeneID:946453
KEGG:ecj:Y75_p0403 KEGG:eco:b0415 PATRIC:32115979 EchoBASE:EB1298
EcoGene:EG11322 HOGENOM:HOG000229250 OMA:TALEMVS
BioCyc:EcoCyc:LUMAZINESYN-MONOMER BioCyc:ECOL316407:JW0405-MONOMER
BioCyc:MetaCyc:LUMAZINESYN-MONOMER Genevestigator:P61714
Uniprot:P61714
Length = 156
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 68/139 (48%), Positives = 100/139 (71%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVAQQLGKSGKY 135
R A+ +ARFN + LLEGA++ K+ VK+ENI VVWVPG++E+ + A L K+GKY
Sbjct: 14 RVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYELPLAAGALAKTGKY 73
Query: 136 TAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGKS 195
AV+ +G V+RG T H++ VA A++G+ +S +P FGVLT ++++QA+ RAG K+
Sbjct: 74 DAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTESIEQAIERAGTKA 133
Query: 196 GNKGAEAALTAIEMASLFE 214
GNKGAEAALTA+EM ++ +
Sbjct: 134 GNKGAEAALTALEMINVLK 152
>TIGR_CMR|CPS_1531 [details] [associations]
symbol:CPS_1531 "6,7-dimethyl-8-ribityllumazine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009231
"riboflavin biosynthetic process" evidence=ISS] HAMAP:MF_00178
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_268273.1
HSSP:Q9UUB1 ProteinModelPortal:Q485J2 SMR:Q485J2 STRING:Q485J2
GeneID:3519446 KEGG:cps:CPS_1531 PATRIC:21466269
BioCyc:CPSY167879:GI48-1612-MONOMER Uniprot:Q485J2
Length = 154
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 62/140 (44%), Positives = 101/140 (72%)
Query: 74 EGLRFALVVARFNELVTKLLLEGALETFKKY-SVKEENIDVVWVPGSFEIGVVAQQLGKS 132
+G +FA+VV+RFN + LL+GA++ K++ +V +E+I +V VPG++E+ + A+++ K
Sbjct: 11 KGKKFAIVVSRFNHFIVDSLLDGAVDALKRHGNVNDEDITIVRVPGAYELPLAAKKIAKK 70
Query: 133 GKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAG 192
G+ A++ IGAV+RG T H+D VA + G+ + S +P FGV+T D+++QA+ RAG
Sbjct: 71 GEADAIIAIGAVIRGGTPHFDFVAGESNKGLAQVCLESEIPVSFGVITTDSIEQAIERAG 130
Query: 193 GKSGNKGAEAALTAIEMASL 212
K+GNKGAEAAL A+EM ++
Sbjct: 131 TKAGNKGAEAALGALEMVNV 150
>TIGR_CMR|CJE_0432 [details] [associations]
symbol:CJE_0432 "6,7-dimethyl-8-ribityllumazine synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:YP_178451.1
HSSP:O66529 ProteinModelPortal:Q5HW84 SMR:Q5HW84 STRING:Q5HW84
GeneID:3231194 KEGG:cjr:CJE0432 PATRIC:20042564 OMA:IVSMESA
BioCyc:CJEJ195099:GJC0-437-MONOMER Uniprot:Q5HW84
Length = 154
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 61/147 (41%), Positives = 95/147 (64%)
Query: 66 LTGFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVV 125
+ G L + + A++ ARFN ++T L+EGA + F ++ KEEN+ ++ VPG+FE+
Sbjct: 4 IEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGGKEENLSLILVPGAFELPYA 63
Query: 126 AQQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMD 185
++ +S K+ A+ C+GAV+RG T H+D V+ G+ + +N +P FGVLT D ++
Sbjct: 64 LKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIANVSLNHNIPVSFGVLTTDTIE 123
Query: 186 QALNRAGGKSGNKGAEAALTAIEMASL 212
QA+ RAG K+GNKG EA T IEM +L
Sbjct: 124 QAIERAGSKAGNKGFEAMTTVIEMLNL 150
>TIGR_CMR|VC_2268 [details] [associations]
symbol:VC_2268 "6,7-dimethyl-8-ribityllumazine synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 OMA:TLAMIET GO:GO:0009349
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 PIR:C82098
RefSeq:NP_231899.2 ProteinModelPortal:Q9KPU4 SMR:Q9KPU4
DNASU:2613190 GeneID:2613190 KEGG:vch:VC2268 PATRIC:20083577
Uniprot:Q9KPU4
Length = 156
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 63/146 (43%), Positives = 98/146 (67%)
Query: 68 GFLTKNEGLRFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVA 126
GF N + A+V++RFN + + LL GA++T K++ + ++NI VV PG+ E+ +VA
Sbjct: 7 GFPAPNA--KIAIVISRFNSFINESLLSGAIDTLKRHGQISDDNITVVRCPGAVELPLVA 64
Query: 127 QQLGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQ 186
Q++ K+G Y A++ +G V+RG T H+D V + G+ + +P FGVLT D +DQ
Sbjct: 65 QRVAKTGDYDAIVSLGCVIRGGTPHFDYVCSEMNKGLAQVSLEFSIPVAFGVLTVDTIDQ 124
Query: 187 ALNRAGGKSGNKGAEAALTAIEMASL 212
A+ RAG K+GNKGAEAAL+A+EM ++
Sbjct: 125 AIERAGTKAGNKGAEAALSALEMINV 150
>TIGR_CMR|SO_3466 [details] [associations]
symbol:SO_3466 "6,7-dimethyl-8-ribityllumazine synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_719015.1
ProteinModelPortal:Q8EBP3 SMR:Q8EBP3 GeneID:1171142
KEGG:son:SO_3466 PATRIC:23526628 Uniprot:Q8EBP3
Length = 158
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 60/139 (43%), Positives = 95/139 (68%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYS-VKEENIDVVWVPGSFEIGVVAQQLGKSGKY 135
+ A+V++RFN + + LLEGAL+T K++ V +ENI VV VPG+ E+ + A+++ SGK+
Sbjct: 14 KVAIVISRFNSFLVESLLEGALDTLKRFGQVSDENITVVRVPGAVELPLAARRVAASGKF 73
Query: 136 TAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGKS 195
++ +GAV+RG T H+D VA G+ + +P FGVLT D ++QA+ R+G K+
Sbjct: 74 DGIIALGAVIRGGTPHFDFVAGECNKGLAQIALEFDLPVAFGVLTTDTIEQAIERSGTKA 133
Query: 196 GNKGAEAALTAIEMASLFE 214
GNKG EAAL+ +EM ++ +
Sbjct: 134 GNKGGEAALSLLEMVNVLQ 152
>TIGR_CMR|CBU_0648 [details] [associations]
symbol:CBU_0648 "6,7-dimethyl-8-ribityllumazine synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009231
eggNOG:COG0054 KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 OMA:GRFNSFI
HOGENOM:HOG000229249 ProtClustDB:PRK00061 RefSeq:NP_819678.1
ProteinModelPortal:Q83DP8 PRIDE:Q83DP8 GeneID:1208533
KEGG:cbu:CBU_0648 PATRIC:17929975
BioCyc:CBUR227377:GJ7S-645-MONOMER Uniprot:Q83DP8
Length = 151
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 61/138 (44%), Positives = 86/138 (62%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYT 136
+ A+VV++FN VT+ LL G L+ + V+ I VWVPG+ EI ++A++L KS Y
Sbjct: 7 KLAIVVSQFNRAVTEKLLNGVLQRLTELGVQANQIKTVWVPGAVEIPLLAKRLAKSKHYQ 66
Query: 137 AVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGKSG 196
AV+C+GAV+RG+T HY+ V + G + VP IFGVLT +QA RAGG+ G
Sbjct: 67 AVVCLGAVIRGETDHYNYVCQQVSFGCQQVALEYEVPIIFGVLTTTTKEQAFARAGGERG 126
Query: 197 NKGAEAALTAIEMASLFE 214
NKGA+ A A+ M L +
Sbjct: 127 NKGADWADAAVSMIKLMK 144
>POMBASE|SPBC409.13 [details] [associations]
symbol:SPBC409.13 "6,7-dimethyl-8-ribityllumazine
synthase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0009231 "riboflavin biosynthetic
process" evidence=ISO] [GO:0009349 "riboflavin synthase complex"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
PomBase:SPBC409.13 GO:GO:0005634 GO:GO:0005737 GO:GO:0016740
EMBL:CU329671 GenomeReviews:CU329671_GR DrugBank:DB00140
GO:GO:0009231 PIR:T40440 RefSeq:NP_595463.1 PDB:1KYV PDB:1KYX
PDB:1KYY PDB:1KZ1 PDB:1KZ4 PDB:1KZ6 PDB:1KZ9 PDB:2A57 PDB:2A58
PDB:2A59 PDBsum:1KYV PDBsum:1KYX PDBsum:1KYY PDBsum:1KZ1
PDBsum:1KZ4 PDBsum:1KZ6 PDBsum:1KZ9 PDBsum:2A57 PDBsum:2A58
PDBsum:2A59 ProteinModelPortal:Q9UUB1 SMR:Q9UUB1 STRING:Q9UUB1
PRIDE:Q9UUB1 EnsemblFungi:SPBC409.13.1 GeneID:2541125
KEGG:spo:SPBC409.13 eggNOG:COG0054 HOGENOM:HOG000229253 KO:K00794
OMA:TLAMIET OrthoDB:EOG49S9GR EvolutionaryTrace:Q9UUB1
NextBio:20802238 GO:GO:0009349 GO:GO:0000906 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 Uniprot:Q9UUB1
Length = 159
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 57/142 (40%), Positives = 89/142 (62%)
Query: 72 KNEGLRFALVVARFNELVTKLLLEGALETF-KKYSVKEENIDVVWVPGSFEI--GVVAQQ 128
K LR +V AR+N + L++GA+ET +K+ VK ENID+ VPGS+E+ G+ A
Sbjct: 14 KGPELRILIVHARWNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRAS- 72
Query: 129 LGKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQAL 188
+ ++ Y AV+ IG +++G T H++ ++ + G++ G++SGVP I G+LT N +QAL
Sbjct: 73 IARN-TYDAVIGIGVLIKGSTMHFEYISEAVVHGLMRVGLDSGVPVILGLLTVLNEEQAL 131
Query: 189 NRAGGKSG-NKGAEAALTAIEM 209
RAG G N G + A+EM
Sbjct: 132 YRAGLNGGHNHGNDWGSAAVEM 153
>TIGR_CMR|ECH_0783 [details] [associations]
symbol:ECH_0783 "6,7-dimethyl-8-ribityllumazine synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016874 GO:GO:0016740
GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 HOGENOM:HOG000229250
RefSeq:YP_507581.1 ProteinModelPortal:Q2GG52 STRING:Q2GG52
GeneID:3927968 KEGG:ech:ECH_0783 PATRIC:20576994 OMA:GLCIGNG
BioCyc:ECHA205920:GJNR-786-MONOMER Uniprot:Q2GG52
Length = 149
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 52/146 (35%), Positives = 78/146 (53%)
Query: 73 NEGLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEI--GVVAQQLG 130
N+ + +VV++F V LLL GA++ KKYS K D+V+VPGSFEI +V +
Sbjct: 3 NDHINILIVVSQFYSDVADLLLNGAVDQLKKYS-KPVKYDIVYVPGSFEIPAAIVFAIMS 61
Query: 131 KSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNR 190
Y + +G V++G T HY V + + + VP FGV+T +++ A+ R
Sbjct: 62 DRHHYDGYIALGCVIKGQTDHYYYVCKGVTTALSEIATHHAVPMGFGVITAGSLEIAMAR 121
Query: 191 AGGKSGNKG---AEAALTAIEMASLF 213
A N G A+AALT IE+ + F
Sbjct: 122 ADINKRNVGGNAAKAALTMIELHNKF 147
>SGD|S000005503 [details] [associations]
symbol:RIB4 "Lumazine synthase (DMRL synthase)" species:4932
"Saccharomyces cerevisiae" [GO:0009231 "riboflavin biosynthetic
process" evidence=IEA;IMP] [GO:0009349 "riboflavin synthase
complex" evidence=IEA] [GO:0000906 "6,7-dimethyl-8-ribityllumazine
synthase activity" evidence=IGI;ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 SGD:S000005503 GO:GO:0005634 EMBL:BK006948
GO:GO:0005758 GO:GO:0016740 GO:GO:0009231 eggNOG:COG0054
HOGENOM:HOG000229253 KO:K00794 OrthoDB:EOG49S9GR GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 EMBL:Z21620 EMBL:Z74885 EMBL:AY558430 PIR:S61871
RefSeq:NP_014498.1 PDB:1EJB PDBsum:1EJB ProteinModelPortal:P50861
SMR:P50861 DIP:DIP-1931N IntAct:P50861 MINT:MINT-397811
STRING:P50861 PaxDb:P50861 PeptideAtlas:P50861 EnsemblFungi:YOL143C
GeneID:854022 KEGG:sce:YOL143C CYGD:YOL143c OMA:GRFNSFI
BioCyc:MetaCyc:YOL143C-MONOMER EvolutionaryTrace:P50861
NextBio:975556 Genevestigator:P50861 GermOnline:YOL143C
Uniprot:P50861
Length = 169
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 48/147 (32%), Positives = 79/147 (53%)
Query: 76 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEI--GV--VAQQLGK 131
+R ++ AR+N ++ L++GA+E V+E NI + VPGS+E+ G + K
Sbjct: 18 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAK 77
Query: 132 SGK-YTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNR 190
GK V+ IG +++G T H++ +++S +++ +P IFG+LTC +QAL R
Sbjct: 78 LGKPLDVVIPIGVLIKGSTMHFEYISDSTTHALMNLQEKVDMPVIFGLLTCMTEEQALAR 137
Query: 191 AGGKSG----NKGAEAALTAIEMASLF 213
AG N G + A+EMA F
Sbjct: 138 AGIDEAHSMHNHGEDWGAAAVEMAVKF 164
>UNIPROTKB|P66034 [details] [associations]
symbol:ribH "6,7-dimethyl-8-ribityllumazine synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0016740
EMBL:BX842576 GO:GO:0009231 eggNOG:COG0054 HOGENOM:HOG000229253
KO:K00794 GO:GO:0009349 Gene3D:3.40.50.960 PANTHER:PTHR21058
SUPFAM:SSF52121 TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 OMA:IVSMESA
PIR:E70902 RefSeq:NP_215932.1 RefSeq:NP_335910.1
RefSeq:YP_006514796.1 PDB:1W19 PDB:1W29 PDB:2C92 PDB:2C94 PDB:2C97
PDB:2C9B PDB:2C9D PDB:2VI5 PDBsum:1W19 PDBsum:1W29 PDBsum:2C92
PDBsum:2C94 PDBsum:2C97 PDBsum:2C9B PDBsum:2C9D PDBsum:2VI5
ProteinModelPortal:P66034 SMR:P66034
EnsemblBacteria:EBMYCT00000003301 EnsemblBacteria:EBMYCT00000072146
GeneID:13320005 GeneID:886681 GeneID:924512 KEGG:mtc:MT1459
KEGG:mtu:Rv1416 KEGG:mtv:RVBD_1416 PATRIC:18124978
TubercuList:Rv1416 BindingDB:P66034 ChEMBL:CHEMBL1075177
EvolutionaryTrace:P66034 Uniprot:P66034
Length = 160
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 48/138 (34%), Positives = 80/138 (57%)
Query: 75 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGK 134
G+R A+V + ++ + LL+GA + + + VV V G+ EI VVAQ+L ++
Sbjct: 17 GVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPT--VVRVLGAIEIPVVAQELARN-- 72
Query: 135 YTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAG-- 192
+ AV+ +G V+RG T H+D V ++ G+ ++S P GVLT + +QAL+RAG
Sbjct: 73 HDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLP 132
Query: 193 GKSGNKGAEAALTAIEMA 210
+ +KGA+A + A+ A
Sbjct: 133 TSAEDKGAQATVAALATA 150
>TIGR_CMR|APH_0539 [details] [associations]
symbol:APH_0539 "6,7-dimethyl-8-ribityllumazine synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016874 GO:GO:0016740 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0009231 eggNOG:COG0054 KO:K00794 GO:GO:0009349 GO:GO:0000906
Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 ProtClustDB:PRK00061 HOGENOM:HOG000229250
OMA:LTMIELK RefSeq:YP_505132.1 ProteinModelPortal:Q2GKG9
STRING:Q2GKG9 GeneID:3931270 KEGG:aph:APH_0539 PATRIC:20949730
BioCyc:APHA212042:GHPM-563-MONOMER Uniprot:Q2GKG9
Length = 152
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 44/140 (31%), Positives = 67/140 (47%)
Query: 80 LVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEI--GVVAQQLGKSGKYTA 137
+VV F+ V L++GA+E K Y+ E +V+ VPG+ E+ + + Y
Sbjct: 13 IVVGSFHTEVCGQLVKGAIERIKAYNAAAE-CEVIEVPGALEVPPAISFAVMSDRESYDG 71
Query: 138 VLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGKSGN 197
+ +G V++G T H V+NSA S + V VP G++T D M A+ RA N
Sbjct: 72 FVALGCVLKGYTDHNIHVSNSAFSALSDIAVQHAVPMGTGIITADTMSLAMERADVNGIN 131
Query: 198 KGAEAALTAIEMASLFEHHL 217
G AA + M L+ L
Sbjct: 132 IGGRAAAAMLRMLELYRRFL 151
>TIGR_CMR|SPO_0268 [details] [associations]
symbol:SPO_0268 "riboflavin synthase, beta subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004746 "riboflavin
synthase activity" evidence=ISS] [GO:0009231 "riboflavin
biosynthetic process" evidence=ISS] HAMAP:MF_00178
InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016740 GO:GO:0009231 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
ProteinModelPortal:Q5LX59 SMR:Q5LX59 PATRIC:23373787
HOGENOM:HOG000229252 ProtClustDB:PRK12419 Uniprot:Q5LX59
Length = 245
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 46/140 (32%), Positives = 76/140 (54%)
Query: 77 RFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYT 136
R+A + A ++ + LEG LE + E +DV VPG+FE+ ++A+ L ++G+Y
Sbjct: 104 RYAFIKANWHADIVDRALEGFLEL-----IPPEQVDVYDVPGAFEMPLLARDLAQTGRYA 158
Query: 137 AVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQ-----ALNRA 191
AV C VV G +D VA + G++ AG+++GVP + LT + A+ RA
Sbjct: 159 AVACAAFVVDGGIYRHDFVAQAVVDGLMRAGLDTGVPILSVSLTPHQYQETDHHNAIFRA 218
Query: 192 GGKSGNKGAEAALTAIEMAS 211
+KG EAA A+++ +
Sbjct: 219 --HFVDKGREAARAALQITA 236
>TIGR_CMR|SPO_1762 [details] [associations]
symbol:SPO_1762 "6,7-dimethyl-8-ribityllumazine synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740 GO:GO:0009231
KO:K00794 GO:GO:0009349 GO:GO:0000906 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114
ProtClustDB:PRK00061 HOGENOM:HOG000229250 OMA:GLCIGNG
RefSeq:YP_167000.1 ProteinModelPortal:Q5LSK5 GeneID:3192913
KEGG:sil:SPO1762 PATRIC:23376847 Uniprot:Q5LSK5
Length = 183
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 76 LRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKY 135
++ +VVA + + + L+ GA + + D+V VPG+ E+ + +
Sbjct: 19 VKLLIVVAPYYKDIADNLVAGAKAEIEGVG---GSWDLVEVPGALEVPTAIAMADRQSNF 75
Query: 136 TAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIF-GVLTCDNMDQALNRAGGK 194
+ +G V+RG+TTHYD V N ++ + G+ G+ CI G+LT + QA RA
Sbjct: 76 DGYVALGCVIRGETTHYDTVCNDSSRAIQLMGLQ-GL-CIGNGILTVETRPQAEVRADPG 133
Query: 195 SGNKGAEAALTAIEMASL 212
+ NKG AA A+ + +L
Sbjct: 134 AMNKGGGAAAAALHLIAL 151
>TIGR_CMR|NSE_0401 [details] [associations]
symbol:NSE_0401 "6,7-dimethyl-8-ribityllumazine synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000906
"6,7-dimethyl-8-ribityllumazine synthase activity" evidence=ISS]
[GO:0009231 "riboflavin biosynthetic process" evidence=ISS]
HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885 UniPathway:UPA00275
GO:GO:0016874 GO:GO:0016740 GO:GO:0009231 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0054 KO:K00794 GO:GO:0009349
GO:GO:0000906 Gene3D:3.40.50.960 PANTHER:PTHR21058 SUPFAM:SSF52121
TIGRFAMs:TIGR00114 HOGENOM:HOG000229249 RefSeq:YP_506288.1
ProteinModelPortal:Q2GE08 STRING:Q2GE08 GeneID:3931560
KEGG:nse:NSE_0401 PATRIC:22680863 OMA:LTMIELK
ProtClustDB:CLSK2528070 BioCyc:NSEN222891:GHFU-424-MONOMER
Uniprot:Q2GE08
Length = 149
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 34/130 (26%), Positives = 68/130 (52%)
Query: 80 LVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQLGKSGKYTAVL 139
++ ++ N + K+L + A + K+ V ++ V+VPG+FE+ L S + +
Sbjct: 7 VICSKVNPNICKVLYKTAAKHLKQQGVACKS---VYVPGAFELPTALNIL-HSKDFAGYV 62
Query: 140 CIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRAGGKSGNKG 199
+G +V+ T H+D V+++A G++ + + + FGV+T +NM+QA N G
Sbjct: 63 ILGCIVKSGTPHFDYVSSAACRGIMDVAIKNNLAIGFGVITANNMEQA-NERSVSYGIAA 121
Query: 200 AEAALTAIEM 209
A + I++
Sbjct: 122 VNACMAMIKL 131
>ASPGD|ASPL0000028987 [details] [associations]
symbol:riboG species:162425 "Emericella nidulans"
[GO:0009231 "riboflavin biosynthetic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IDA] [GO:0009349 "riboflavin
synthase complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA]
[GO:0000906 "6,7-dimethyl-8-ribityllumazine synthase activity"
evidence=IEA] HAMAP:MF_00178 InterPro:IPR002180 Pfam:PF00885
UniPathway:UPA00275 EMBL:BN001305 GO:GO:0009231
HOGENOM:HOG000229253 GO:GO:0009349 Gene3D:3.40.50.960
PANTHER:PTHR21058 SUPFAM:SSF52121 TIGRFAMs:TIGR00114 GO:GO:0004746
EnsemblFungi:CADANIAT00003256 OMA:ETMHFEY Uniprot:C8VFD4
Length = 207
Score = 148 (57.2 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 132 SGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGVPCIFGVLTCDNMDQALNRA 191
S Y A++ IG +++G+T H++ +A++ G++ +++GVP IFGVLT +Q L RA
Sbjct: 114 SKPYDAIIAIGVLIKGETMHFEYIADAVTHGLMRVQLDTGVPVIFGVLTLLTEEQGLERA 173
Query: 192 G-GKSG--NKGAEAALTAIEM 209
G G G N G + A+E+
Sbjct: 174 GLGSKGMHNHGEDWGNAAVEL 194
Score = 106 (42.4 bits), Expect = 0.00060, P = 0.00060
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 75 GLRFALVVARFNELVTKLLLEGALETFKKYSVKEENIDVVWVPGSFEIGVVAQQL----- 129
GLR A+V AR+N + L++GA +T + V E++I++ VPGS+E+ Q+L
Sbjct: 17 GLRVAIVHARWNMGIIGPLVDGATKTLRAAGVAEDHIEIHTVPGSYELPFAVQRLYSASQ 76
Query: 130 ------GKSGKYTAVLCIGAVVRGDTTHYDAVANSAASGVLSAGVNSGV 172
G SG+ + + + D + + A+SAAS A + GV
Sbjct: 77 LQAANAGSSGEGISATDLLSSSTADVSKTPSTASSAASKPYDAIIAIGV 125
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 218 218 0.00091 112 3 11 22 0.38 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 587 (62 KB)
Total size of DFA: 150 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.90u 0.16s 18.06t Elapsed: 00:00:00
Total cpu time: 17.90u 0.16s 18.06t Elapsed: 00:00:00
Start: Sat May 11 09:52:54 2013 End: Sat May 11 09:52:54 2013