Query 027804
Match_columns 218
No_of_seqs 120 out of 201
Neff 5.1
Searched_HMMs 29240
Date Tue Mar 26 02:32:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u5t_A Appears to BE functiona 100.0 7E-70 2.4E-74 474.9 13.7 180 2-191 1-181 (233)
2 3cuq_A Vacuolar-sorting protei 100.0 2.3E-68 7.9E-73 465.5 13.1 168 24-191 1-168 (234)
3 3cuq_B Vacuolar protein-sortin 100.0 3.5E-39 1.2E-43 278.5 11.4 150 32-190 10-167 (218)
4 1w7p_D VPS36P, YLR417W; ESCRT- 99.9 3.5E-28 1.2E-32 233.9 9.3 171 3-190 321-507 (566)
5 1u5t_B Defective in vacuolar p 99.9 6.7E-24 2.3E-28 176.9 10.5 94 92-189 9-111 (169)
6 3i5g_C Myosin catalytic light 90.8 2.2 7.6E-05 32.9 9.9 94 37-157 6-101 (159)
7 2lmt_A Calmodulin-related prot 90.8 1.5 5E-05 32.8 8.6 38 37-79 7-44 (148)
8 2ovk_B RLC, myosin regulatory 89.0 0.95 3.3E-05 33.5 6.2 110 38-157 14-136 (153)
9 2mys_C Myosin; muscle protein, 88.6 2.8 9.6E-05 30.2 8.5 97 37-157 5-101 (149)
10 3ox6_A Calcium-binding protein 88.1 5.8 0.0002 28.5 10.9 111 38-156 9-140 (153)
11 3fwb_A Cell division control p 87.2 4.4 0.00015 29.6 8.9 109 39-156 22-147 (161)
12 3i5g_B Myosin regulatory light 84.6 1.8 6.3E-05 33.2 5.8 106 37-151 13-131 (153)
13 2ovk_C Myosin catalytic light 84.4 10 0.00034 27.9 9.7 38 37-79 6-45 (159)
14 2qac_A Myosin A tail domain in 83.6 3.9 0.00013 29.8 7.0 104 37-150 11-129 (146)
15 3qrx_A Centrin; calcium-bindin 83.0 10 0.00034 28.0 9.3 110 38-156 26-152 (169)
16 1exr_A Calmodulin; high resolu 82.7 10 0.00035 27.6 9.1 110 38-156 8-134 (148)
17 1wdc_C Scallop myosin; calcium 82.6 12 0.00041 27.3 10.8 111 37-156 6-137 (156)
18 3j04_B Myosin regulatory light 82.1 2.8 9.6E-05 30.3 5.6 111 37-156 4-127 (143)
19 4ds7_A Calmodulin, CAM; protei 81.1 13 0.00043 26.5 8.9 109 38-156 9-134 (147)
20 1top_A Troponin C; contractIle 80.5 7.8 0.00027 28.3 7.7 110 38-156 18-147 (162)
21 3a4c_A DNA replication factor 79.8 8.8 0.0003 29.4 7.8 67 114-186 30-97 (106)
22 2obh_A Centrin-2; DNA repair c 79.6 11 0.00037 27.6 8.3 111 37-156 3-130 (143)
23 2lhi_A Calmodulin, serine/thre 78.9 5.6 0.00019 31.0 6.8 110 37-156 8-134 (176)
24 2xvc_A ESCRT-III, SSO0910; cel 78.6 1.7 5.9E-05 30.1 3.1 34 112-154 20-53 (59)
25 2kmu_A ATP-dependent DNA helic 78.4 3.8 0.00013 27.9 4.8 37 32-71 6-48 (56)
26 1wdc_B Scallop myosin; calcium 78.4 15 0.00052 26.8 8.8 105 38-151 16-133 (156)
27 3akb_A Putative calcium bindin 77.7 8.6 0.00029 28.1 7.2 37 114-156 111-147 (166)
28 2c9l_Y EB1, zebra, BZLF1 trans 77.6 0.76 2.6E-05 31.6 1.1 40 34-80 19-58 (63)
29 2i3o_A Gamma-glutamyltransfera 77.1 3.4 0.00012 39.2 5.8 71 47-126 150-231 (516)
30 3u0k_A Rcamp; fluorescent prot 77.1 5.1 0.00017 37.6 6.9 38 37-79 299-336 (440)
31 2mys_B Myosin; muscle protein, 76.4 19 0.00066 26.5 8.9 110 38-156 23-146 (166)
32 1q80_A SCP, sarcoplasmic calci 76.1 19 0.00067 26.4 8.9 42 37-79 3-44 (174)
33 2f2o_A Calmodulin fused with c 73.6 23 0.00078 26.3 8.8 111 38-157 9-136 (179)
34 3dtp_E RLC, myosin regulatory 73.2 14 0.00048 28.7 7.7 108 38-156 55-176 (196)
35 1nya_A Calerythrin; EF-hand, m 73.0 18 0.00062 26.6 8.0 110 37-157 4-118 (176)
36 2bl0_C Myosin regulatory light 72.4 23 0.00079 25.1 8.8 109 38-156 4-129 (142)
37 2jnf_A Troponin C; stretch act 72.3 21 0.0007 25.9 8.1 39 114-156 104-142 (158)
38 2f3o_A PFLD, PFL2, pyruvate fo 71.8 33 0.0011 34.2 11.5 128 48-191 215-364 (776)
39 1dtl_A Cardiac troponin C; hel 71.2 21 0.0007 25.9 7.9 35 39-78 17-52 (161)
40 3k21_A PFCDPK3, calcium-depend 70.8 9 0.00031 29.8 6.0 37 38-79 50-86 (191)
41 1alv_A Calpain, S-camld; calci 70.4 23 0.00079 26.5 8.2 35 38-78 2-37 (173)
42 1t6s_A Conserved hypothetical 69.3 7.6 0.00026 31.5 5.4 62 102-173 10-75 (162)
43 2e0w_A Gamma-glutamyltranspept 69.3 6.3 0.00022 37.7 5.6 74 45-126 162-246 (556)
44 3nyv_A Calmodulin-domain prote 68.9 27 0.00091 31.1 9.4 42 37-79 332-373 (484)
45 2dg5_A Gamma-glutamyltranspept 66.5 7.3 0.00025 35.3 5.2 74 45-126 162-246 (366)
46 3b09_A Peptidyl-prolyl CIS-tra 66.5 15 0.00053 26.6 6.1 55 94-151 31-85 (88)
47 2bl0_B Myosin regulatory light 64.8 22 0.00074 25.2 6.7 106 42-156 7-127 (145)
48 1w7j_B Myosin light chain 1; m 64.2 14 0.00047 26.7 5.6 108 38-156 8-137 (151)
49 2dk8_A DNA-directed RNA polyme 64.0 21 0.00073 25.8 6.4 63 97-172 13-75 (81)
50 3nqb_A Adenine deaminase 2; PS 63.5 6.9 0.00024 37.3 4.7 34 138-173 490-523 (608)
51 1qv0_A Obelin, OBL; photoprote 63.4 8 0.00027 29.3 4.2 45 108-156 119-164 (195)
52 3lij_A Calcium/calmodulin depe 61.6 9.6 0.00033 34.3 5.1 98 38-157 344-442 (494)
53 1wy9_A Allograft inflammatory 61.5 3.8 0.00013 31.0 2.1 94 31-158 39-132 (147)
54 2bec_A Calcineurin B homologou 61.2 4.5 0.00015 31.4 2.4 33 114-149 127-159 (202)
55 2v36_A Gamma-glutamyltranspept 61.0 9 0.00031 34.9 4.7 32 91-126 210-242 (376)
56 2qmc_A GGT, gamma-glutamyltran 60.3 10 0.00034 34.7 4.9 31 91-125 225-256 (377)
57 3mse_B Calcium-dependent prote 60.0 24 0.00081 26.8 6.5 38 36-78 35-72 (180)
58 3ll8_B Calcineurin subunit B t 59.5 36 0.0012 24.3 7.1 34 113-149 87-120 (155)
59 2kn2_A Calmodulin; S MAPK phos 56.8 36 0.0012 22.6 6.3 84 39-148 8-91 (92)
60 2z99_A Putative uncharacterize 56.3 23 0.0008 30.0 6.2 60 101-172 17-80 (219)
61 2nlz_A Cephalosporin acylase; 55.4 18 0.00062 34.5 6.0 31 91-125 215-246 (547)
62 1uhk_A Aequorin 2, aequorin; E 55.0 13 0.00046 27.8 4.2 42 111-156 118-160 (191)
63 3mwu_A Calmodulin-domain prote 53.3 67 0.0023 28.6 9.2 106 37-157 328-433 (486)
64 3e3r_A Calcyphosin, calcyphosi 52.0 14 0.00047 28.2 3.9 38 36-78 33-70 (204)
65 4eto_A Protein S100-A4; calciu 51.8 28 0.00095 24.6 5.2 54 103-156 12-68 (93)
66 1ggw_A Protein (CDC4P); light 51.7 35 0.0012 24.1 5.9 40 113-157 88-127 (140)
67 3sjs_A URE3-BP sequence specif 51.3 54 0.0019 26.0 7.5 103 39-151 50-163 (220)
68 1tiz_A Calmodulin-related prot 51.3 40 0.0014 20.6 5.5 41 113-157 13-53 (67)
69 3nso_A Protein S100-A3; EF-han 51.2 39 0.0013 24.5 6.1 55 103-157 12-69 (101)
70 2y8n_A 4-hydroxyphenylacetate 51.1 32 0.0011 35.0 7.2 120 58-191 296-437 (897)
71 2hpk_A Photoprotein berovin; s 50.6 18 0.00062 28.0 4.4 21 39-59 35-55 (208)
72 1k2h_A S100A1, S-100 protein, 50.5 24 0.00081 23.7 4.5 42 112-156 22-67 (93)
73 1tzy_D Histone H4-VI; histone- 50.2 65 0.0022 23.7 7.2 14 137-150 81-94 (103)
74 3n22_A Protein S100-A2; EF-han 50.0 13 0.00044 26.8 3.2 47 111-157 23-70 (98)
75 1m45_A MLC1P, myosin light cha 49.9 11 0.00037 27.2 2.8 90 43-157 7-99 (148)
76 2jjz_A Ionized calcium-binding 49.8 7.5 0.00026 29.4 2.0 91 35-159 45-135 (150)
77 3sg6_A Gcamp2, myosin light ch 49.5 44 0.0015 31.0 7.5 110 38-156 310-436 (450)
78 4abl_A Poly [ADP-ribose] polym 49.3 18 0.00061 29.5 4.3 64 142-207 64-132 (183)
79 3tl8_B Effector protein hopab2 49.3 45 0.0015 25.7 6.2 59 15-80 27-88 (117)
80 2lf3_A Effector protein hopab3 47.9 52 0.0018 25.0 6.3 59 15-80 21-82 (107)
81 3zwh_A Protein S100-A4; Ca-bin 47.5 40 0.0014 24.5 5.6 56 102-157 14-72 (104)
82 2y5i_A S100Z, S100 calcium bin 46.2 28 0.00096 24.7 4.5 47 111-157 22-69 (99)
83 1ggw_A Protein (CDC4P); light 45.8 13 0.00044 26.6 2.6 61 41-130 6-66 (140)
84 3rkx_A Biotin-[acetyl-COA-carb 45.2 42 0.0015 29.4 6.4 65 101-179 6-71 (323)
85 2lnk_A Protein S100-A4; EF-han 44.6 23 0.00078 26.4 3.9 46 112-157 35-81 (113)
86 2y75_A HTH-type transcriptiona 44.5 90 0.0031 22.8 7.4 84 98-197 9-95 (129)
87 3nxa_A Protein S100-A16; S100 44.4 68 0.0023 22.9 6.4 77 33-130 4-84 (100)
88 1r9d_A Glycerol dehydratase; r 43.5 2.6E+02 0.0089 27.8 14.4 117 58-191 233-371 (787)
89 2lf6_A Effector protein hopab1 41.2 40 0.0014 25.4 4.7 59 15-80 10-71 (101)
90 1v4r_A Transcriptional repress 41.1 49 0.0017 23.3 5.2 73 94-178 11-85 (102)
91 1avs_A Troponin C; muscle cont 40.8 74 0.0025 21.0 5.9 40 113-156 32-71 (90)
92 3tl4_X Glutaminyl-tRNA synthet 40.2 39 0.0013 27.9 5.0 92 50-149 17-128 (187)
93 2k9l_A RNA polymerase sigma fa 40.0 49 0.0017 22.9 4.9 43 103-154 33-76 (76)
94 3jtn_A YPBH, adapter protein M 39.7 96 0.0033 22.0 6.5 52 139-191 9-61 (91)
95 2b1u_A Calmodulin-like protein 39.6 66 0.0023 19.9 5.5 41 113-157 18-58 (71)
96 3rm1_A Protein S100-B; alpha-h 39.6 69 0.0023 21.9 5.6 41 116-156 26-67 (92)
97 3r07_C Putative lipoate-protei 39.5 28 0.00094 25.2 3.6 51 93-148 37-89 (91)
98 2wvr_C DNA replication factor 38.8 6.5 0.00022 37.8 0.0 65 113-183 468-533 (546)
99 2jt1_A PEFI protein; solution 38.6 25 0.00085 24.8 3.1 45 101-154 7-52 (77)
100 2ccm_A Calexcitin; EF hand, ca 38.3 1.2E+02 0.0041 22.5 7.4 40 39-79 11-51 (191)
101 2p2u_A HOST-nuclease inhibitor 38.2 78 0.0027 25.4 6.5 32 29-60 51-82 (171)
102 2aao_A CDPK, calcium-dependent 37.4 73 0.0025 23.0 5.8 37 38-79 25-61 (166)
103 2joj_A Centrin protein; N-term 37.2 77 0.0026 20.0 5.3 41 113-157 19-59 (77)
104 1n93_X P40 nucleoprotein; RNA 36.1 39 0.0013 30.3 4.5 42 34-75 137-179 (375)
105 2qkf_A 3-deoxy-D-manno-octulos 36.1 67 0.0023 27.8 6.1 112 66-195 77-197 (280)
106 2wcb_A Protein S100-A12; calci 36.1 41 0.0014 23.5 4.0 47 111-157 24-71 (95)
107 3b0c_W CENP-W, centromere prot 36.0 40 0.0014 23.4 3.8 35 93-150 36-70 (76)
108 1j55_A S-100P protein; metal b 35.9 40 0.0014 23.5 3.9 44 114-157 24-68 (95)
109 1b67_A Protein (histone HMFA); 35.9 30 0.001 23.3 3.1 15 137-151 54-68 (68)
110 4ehp_B Catenin alpha-1; adhere 35.7 38 0.0013 26.0 3.9 44 98-150 57-100 (111)
111 3kh6_A Poly [ADP-ribose] polym 35.4 20 0.00068 29.7 2.5 65 142-208 75-144 (199)
112 2kax_A Protein S100-A5; EF-han 35.3 42 0.0014 23.1 3.9 45 111-157 22-66 (92)
113 1s6j_A CDPK, calcium-dependent 35.1 68 0.0023 20.8 4.9 41 113-157 35-75 (87)
114 2dx6_A Hypothetical protein TT 34.5 22 0.00075 27.8 2.5 65 142-208 44-120 (159)
115 2o34_A Hypothetical protein; s 34.5 64 0.0022 27.7 5.6 52 33-84 47-107 (250)
116 1cb1_A Calbindin D9K; calcium- 34.5 18 0.00062 23.2 1.7 41 113-156 21-62 (78)
117 1jba_A GCAP-2, protein (guanyl 34.4 1.5E+02 0.0051 22.4 8.1 30 42-76 24-54 (204)
118 2kn2_A Calmodulin; S MAPK phos 34.3 99 0.0034 20.3 5.8 40 113-156 21-60 (92)
119 4fxe_A Antitoxin RELB; toxin/a 34.0 20 0.00067 25.7 1.9 24 57-80 6-29 (79)
120 3cs1_A Flagellar calcium-bindi 33.7 35 0.0012 26.9 3.6 113 37-157 45-183 (219)
121 1xk4_C Calgranulin B; S100 fam 33.5 79 0.0027 22.7 5.3 45 112-156 25-71 (113)
122 1k9u_A Polcalcin PHL P 7; poll 33.5 93 0.0032 19.8 5.6 39 113-156 15-53 (78)
123 4fmr_A Uncharacterized hypothe 32.8 42 0.0014 29.1 4.2 43 113-159 28-75 (265)
124 1id3_B Histone H4; nucleosome 32.4 1.5E+02 0.0051 21.8 7.3 14 137-150 80-93 (102)
125 1alv_A Calpain, S-camld; calci 32.4 1.5E+02 0.0051 21.8 9.0 91 31-157 68-158 (173)
126 2lvv_A Flagellar calcium-bindi 32.3 77 0.0026 25.1 5.5 38 38-80 49-87 (226)
127 1dgu_A Calcium-saturated CIB; 31.9 1.1E+02 0.0036 22.8 6.0 16 115-130 74-90 (183)
128 2iie_A Integration HOST factor 31.8 50 0.0017 27.2 4.4 41 106-151 35-75 (204)
129 2ehb_A Calcineurin B-like prot 31.5 50 0.0017 25.2 4.2 40 109-148 118-158 (207)
130 2ktg_A Calmodulin, putative; e 31.5 1.1E+02 0.0036 19.8 6.0 41 113-157 26-66 (85)
131 2pmy_A RAS and EF-hand domain- 31.5 1.2E+02 0.004 20.3 5.8 49 102-156 28-76 (91)
132 1nya_A Calerythrin; EF-hand, m 31.4 1.5E+02 0.005 21.4 8.6 48 104-157 104-152 (176)
133 4dm9_A Ubiquitin carboxyl-term 31.2 23 0.00078 30.1 2.2 20 56-78 10-29 (228)
134 2xns_C RGS14, regulator of G-p 31.1 42 0.0014 21.2 2.8 28 122-149 4-35 (40)
135 2wdt_A Ubiquitin carboxyl-term 30.9 16 0.00056 31.1 1.3 21 56-79 9-29 (232)
136 3nr7_A DNA-binding protein H-N 30.6 70 0.0024 23.2 4.5 47 32-78 26-75 (86)
137 1k94_A Grancalcin; penta-EF-ha 30.5 1.5E+02 0.0053 21.4 9.1 90 31-157 61-150 (165)
138 2d58_A Allograft inflammatory 30.5 1.3E+02 0.0045 20.6 6.0 50 103-156 34-83 (107)
139 2qgq_A Protein TM_1862; alpha- 30.4 73 0.0025 27.0 5.3 60 121-191 126-185 (304)
140 3hdi_A Processing protease; CA 30.2 41 0.0014 28.9 3.7 42 115-166 364-405 (421)
141 2opo_A Polcalcin CHE A 3; calc 30.2 1.1E+02 0.0039 19.7 5.8 38 114-156 24-61 (86)
142 2znd_A Programmed cell death p 30.2 1.6E+02 0.0055 21.5 7.9 91 31-157 65-156 (172)
143 3nxa_A Protein S100-A16; S100 29.9 1E+02 0.0035 21.9 5.3 41 116-156 29-70 (100)
144 1xd3_A Ubiquitin carboxyl-term 29.4 26 0.00089 29.8 2.3 20 56-78 8-27 (230)
145 3rii_A Ubiquitin carboxyl-term 29.4 24 0.00082 30.1 2.0 21 56-79 15-35 (233)
146 1o60_A 2-dehydro-3-deoxyphosph 29.3 75 0.0026 27.7 5.3 113 66-195 80-200 (292)
147 2kz2_A Calmodulin, CAM; TR2C, 29.2 1.4E+02 0.0046 20.3 6.0 40 113-156 41-80 (94)
148 2ggz_A Guanylyl cyclase-activa 29.2 1.1E+02 0.0036 23.7 5.8 30 44-78 23-53 (211)
149 5pal_A Parvalbumin; calcium-bi 28.7 1.1E+02 0.0039 20.6 5.3 44 112-156 52-95 (109)
150 1msz_A DNA-binding protein smu 28.6 62 0.0021 23.6 3.9 38 42-79 21-62 (86)
151 2r2i_A Guanylyl cyclase-activa 28.5 1.4E+02 0.0048 22.5 6.3 32 43-79 17-49 (198)
152 1bu3_A Calcium-binding protein 28.5 1.4E+02 0.0047 20.2 5.7 43 113-156 54-96 (109)
153 3rk6_A Polyadenylate-binding p 28.2 2.6E+02 0.0088 23.2 10.8 142 6-156 9-190 (234)
154 1r42_A Angiotensin I convertin 27.5 94 0.0032 29.4 6.0 63 67-150 526-591 (615)
155 1i4d_A Arfaptin 2, partner of 27.3 1.3E+02 0.0043 25.5 6.2 48 14-61 149-203 (224)
156 1e5p_A Aphrodisin; lipocalin, 27.1 35 0.0012 25.5 2.4 20 59-78 118-137 (151)
157 3pm8_A PFCDPK2, calcium-depend 26.9 40 0.0014 26.1 2.9 35 39-78 56-90 (197)
158 2yfw_B Histone H4, H4; cell cy 26.8 1.8E+02 0.0061 21.3 6.3 14 137-150 81-94 (103)
159 3fs7_A Parvalbumin, thymic; ca 26.7 96 0.0033 21.1 4.6 43 113-156 54-96 (109)
160 2of5_H Leucine-rich repeat and 26.4 82 0.0028 23.5 4.4 93 56-172 5-109 (118)
161 2l2e_A Calcium-binding protein 26.0 2E+02 0.0068 21.2 8.9 28 45-77 30-58 (190)
162 4g92_C HAPE; transcription fac 25.8 2.1E+02 0.0072 21.5 6.7 18 137-154 94-111 (119)
163 1j7q_A CAVP, calcium vector pr 25.6 1.4E+02 0.0048 19.3 5.9 40 113-156 26-68 (86)
164 2h2k_A Protein S100-A13; calci 25.5 55 0.0019 23.7 3.2 41 114-156 37-77 (106)
165 1bjf_A Neurocalcin delta; calc 25.5 2E+02 0.007 21.2 10.2 29 45-78 30-59 (193)
166 1qx2_A Vitamin D-dependent cal 25.4 94 0.0032 19.4 4.1 37 116-156 22-60 (76)
167 2lv7_A Calcium-binding protein 25.4 70 0.0024 22.6 3.7 40 113-156 48-87 (100)
168 1sjj_A Actinin; 3-helix bundle 25.4 64 0.0022 31.2 4.5 40 114-157 774-813 (863)
169 3li6_A Calcium-binding protein 25.2 54 0.0018 20.1 2.8 38 115-156 14-51 (66)
170 3sgr_A Tandem repeat of amyloi 24.5 33 0.0011 19.4 1.3 16 149-167 2-17 (25)
171 1ais_B TFB TFIIB, protein (tra 24.5 2.5E+02 0.0086 21.9 8.3 65 45-112 71-141 (200)
172 1pva_A Parvalbumin; calcium bi 24.5 1.2E+02 0.0039 20.6 4.7 43 113-156 54-96 (110)
173 3sao_A Extracellular fatty aci 24.4 39 0.0013 25.7 2.3 22 58-79 119-140 (160)
174 1k8u_A S100A6, calcyclin, CACY 24.3 78 0.0027 20.6 3.6 41 115-156 25-66 (90)
175 3f8t_A Predicted ATPase involv 24.3 36 0.0012 32.4 2.4 75 60-151 395-484 (506)
176 2pvb_A Protein (parvalbumin); 24.1 1.2E+02 0.0041 20.5 4.7 43 113-156 53-95 (108)
177 3a8r_A Putative uncharacterize 23.9 2.4E+02 0.0082 21.4 8.4 27 101-127 62-88 (179)
178 1wlz_A DJBP, CAP-binding prote 23.9 1.7E+02 0.0058 19.7 6.0 33 115-151 38-70 (105)
179 1m45_A MLC1P, myosin light cha 23.7 1.9E+02 0.0065 20.2 6.0 41 113-157 95-135 (148)
180 2fi0_A Conserved domain protei 23.6 45 0.0015 23.4 2.3 39 108-160 40-78 (81)
181 1rwy_A Parvalbumin alpha; EF-h 23.6 1.7E+02 0.0059 19.6 5.5 43 113-156 53-95 (109)
182 1dtl_A Cardiac troponin C; hel 23.4 1.6E+02 0.0056 20.9 5.5 44 114-157 68-111 (161)
183 2heo_A Z-DNA binding protein 1 23.3 89 0.0031 20.7 3.7 43 100-155 12-54 (67)
184 2l76_A Nfatc2-interacting prot 23.2 35 0.0012 25.4 1.7 25 56-80 36-60 (95)
185 2ou2_A Histone acetyltransfera 23.1 87 0.003 27.6 4.5 45 101-154 194-240 (280)
186 2zfd_A Calcineurin B-like prot 23.1 1.6E+02 0.0056 22.9 5.9 40 109-148 129-169 (226)
187 3g9k_L Capsule biosynthesis pr 23.1 62 0.0021 28.8 3.6 26 91-125 189-215 (323)
188 2ozu_A Histone acetyltransfera 23.1 53 0.0018 29.1 3.1 41 102-154 202-242 (284)
189 1dzk_A PIG OBP, odorant-bindin 23.0 46 0.0016 24.9 2.4 20 59-78 124-143 (157)
190 1bj7_A D 2; allergen, lipocali 23.0 43 0.0015 25.2 2.3 20 59-78 123-142 (156)
191 2mys_C Myosin; muscle protein, 23.0 1.8E+02 0.0062 20.1 5.6 40 112-156 96-135 (149)
192 2krc_A DNA-directed RNA polyme 22.7 37 0.0013 25.3 1.8 58 103-167 15-75 (99)
193 3fwb_A Cell division control p 22.6 1.9E+02 0.0066 20.4 5.8 49 106-157 64-112 (161)
194 2ovk_C Myosin catalytic light 22.4 2.1E+02 0.007 20.4 6.0 39 114-156 98-138 (159)
195 2sas_A Sarcoplasmic calcium-bi 22.4 1.8E+02 0.0063 21.0 5.7 15 115-129 74-88 (185)
196 4a8e_A XER A, probable tyrosin 22.1 1.3E+02 0.0045 23.8 5.2 75 61-157 206-283 (292)
197 3ihr_A Ubiquitin carboxyl-term 21.8 37 0.0013 30.5 1.9 21 56-79 10-30 (328)
198 1xk4_C Calgranulin B; S100 fam 21.7 2.2E+02 0.0075 20.2 7.1 72 33-129 5-84 (113)
199 1djx_A PLC-D1, phosphoinositid 21.4 1.1E+02 0.0039 29.2 5.3 103 42-152 13-128 (624)
200 2hlv_A Odorant-binding protein 21.3 52 0.0018 24.8 2.4 20 59-78 125-144 (160)
201 2ccm_A Calexcitin; EF hand, ca 21.2 2E+02 0.0069 21.2 5.8 48 104-157 111-159 (191)
202 1y7y_A C.AHDI; helix-turn-heli 21.2 1.3E+02 0.0044 18.9 4.1 39 34-78 31-69 (74)
203 1cmx_A Protein (ubiquitin YUH1 21.0 29 0.001 29.7 1.0 21 55-78 9-29 (235)
204 3aqo_A Probable secdf protein- 20.9 1.6E+02 0.0055 24.5 5.6 57 137-193 19-80 (229)
205 1j09_A Glutamyl-tRNA synthetas 20.9 1.9E+02 0.0064 26.8 6.5 63 42-106 19-99 (468)
206 1taf_A TFIID TBP associated fa 20.6 1.8E+02 0.0062 20.0 4.9 13 137-149 53-65 (68)
207 3kff_A MUP 4, major urinary pr 20.5 55 0.0019 24.9 2.4 21 59-79 126-146 (162)
208 3q71_A Poly [ADP-ribose] polym 20.5 93 0.0032 26.1 4.0 65 142-208 82-164 (221)
209 1vhu_A Hypothetical protein AF 20.3 55 0.0019 27.0 2.5 30 177-208 127-156 (211)
210 1gjy_A Sorcin, CP-22, V19; cal 20.3 2.5E+02 0.0086 20.3 8.4 90 31-157 63-152 (167)
211 3ih6_A Putative zinc protease; 20.1 88 0.003 23.8 3.6 28 115-150 153-180 (197)
No 1
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=100.00 E-value=7e-70 Score=474.88 Aligned_cols=180 Identities=32% Similarity=0.661 Sum_probs=157.1
Q ss_pred CCCcchhhhhccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCC-
Q 027804 2 RRRPGIGGLQSAAVARDQYRLLGENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLA- 80 (218)
Q Consensus 2 rR~vGi~ai~~~~~~~~~y~~~g~~l~~~~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLa- 80 (218)
|||+||+||+ ++++++|+++|++++++|+++|++||++||++|++||++|++||++||+||++|++||++||||||+
T Consensus 1 rr~~G~~a~~--~~~~~~~~~~g~~l~~~~~~~l~~Ql~~F~~~L~~FA~kHk~eI~~dp~fR~~F~~mc~siGVDPLa~ 78 (233)
T 1u5t_A 1 MKQFGLAAFD--ELKDGKYNDVNKTILEKQSVELRDQLMVFQERLVEFAKKHNSELQASPEFRSKFMHMCSSIGIDPLSL 78 (233)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCHHHHHHHHHHHHHHTCCHHHH
T ss_pred CCCccHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCHHHHHHHHHHHHHcCCCCCcc
Confidence 6899999999 6889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEE
Q 027804 81 SNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVI 160 (218)
Q Consensus 81 s~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi 160 (218)
|+|| +++||+|||||||||||||||++||++|||||+|+||+++++|+ .+||+|||+|||++|++| +||+|+
T Consensus 79 s~kg--~~~lg~gdfy~eLavqIvEvC~~tr~~nGGli~l~el~~~~~r~-----~~IS~dDi~rAik~L~~L-~gf~v~ 150 (233)
T 1u5t_A 79 FDRD--KHLFTVNDFYYEVCLKVIEICRQTKDMNGGVISFQELEKVHFRK-----LNVGLDDLEKSIDMLKSL-ECFEIF 150 (233)
T ss_dssp TTSS--GGGTTHHHHHHHHHHHHHHHHHHHTTTSSSCEEHHHHHHTTTTT-----TTCCHHHHHHHHHHHTTT-CCCCEE
T ss_pred CCcc--ccccCcchHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHhh-----cCCCHHHHHHHHHHhhhc-cCeEEE
Confidence 9999 89999999999999999999999999999999999999999997 489999999999999999 999999
Q ss_pred EECCEEEEEecCCCcchhHHHHHHHHhhccc
Q 027804 161 SVGKKKLVRSVPTELNKDHNQILELAQVTSI 191 (218)
Q Consensus 161 ~ig~k~~vrSvP~ELs~Dq~~vLe~a~~~~~ 191 (218)
++||++||||||.|||+||++||++|+..|.
T Consensus 151 ~v~g~~~vqsvp~el~~D~~~vLe~a~~~g~ 181 (233)
T 1u5t_A 151 QIRGKKFLRSVPNELTSDQTKILEICSILGY 181 (233)
T ss_dssp EETTEEEECCSSSCCCTTHHHHHHTTTTTSC
T ss_pred EECCEEEEEeCCCccchHHHHHHHHHHhcCc
Confidence 9999999999999999999999999997543
No 2
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=100.00 E-value=2.3e-68 Score=465.50 Aligned_cols=168 Identities=54% Similarity=0.939 Sum_probs=155.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHH
Q 027804 24 GENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQI 103 (218)
Q Consensus 24 g~~l~~~~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqI 103 (218)
|++++++|+++|++||++||++|++||++|++||++||+||++|++||++||||||+++||||+++||+|||||||||||
T Consensus 1 g~~l~~~~~~~~~~Ql~~F~~~L~~FA~kH~~eI~~dp~fR~~F~~mc~siGVDPlas~kg~ws~~lG~gdfy~eLavqI 80 (234)
T 3cuq_A 1 GTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQI 80 (234)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCCTTSCTTSHHHHHHCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHHHHHHHHHHcCCCcccCCcchhhhhcCcchHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCEEEEEecCCCcchhHHHHH
Q 027804 104 VEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQIL 183 (218)
Q Consensus 104 vEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vL 183 (218)
||||++||++|||||+|+||+|+++|+||....+||+|||+|||++|++||+||+|+++||++||||||.|||+||++||
T Consensus 81 vEvC~~tr~~nGGli~L~el~~~~~r~Rg~~~~~IS~dDi~rAik~L~~LG~g~~v~~~~g~~~VqSvp~el~~D~~~vL 160 (234)
T 3cuq_A 81 IEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVL 160 (234)
T ss_dssp HHHHHHHHHHHSSEEEHHHHHHHHHHTTTTCCSSCCHHHHHHHHHHHGGGBTTCEEEEETTEEEEECSCCCCCHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEHHHHHHHHHHhcCCccCccCHHHHHHHHHHHHhcCCCeEEEEECCEEEEEeCCCccchHHHHHH
Confidence 99999999999999999999999999999866799999999999999999999999999999999999999999999999
Q ss_pred HHHhhccc
Q 027804 184 ELAQVTSI 191 (218)
Q Consensus 184 e~a~~~~~ 191 (218)
++|+.+|.
T Consensus 161 ela~~~g~ 168 (234)
T 3cuq_A 161 QLAEKNGY 168 (234)
T ss_dssp HHHTTTSE
T ss_pred HHHHhcCc
Confidence 99997654
No 3
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=100.00 E-value=3.5e-39 Score=278.48 Aligned_cols=150 Identities=15% Similarity=0.238 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHH------HHHHHHHHhhccccCChhHHHHHHHHHHhcCCC-CCCCCCCccccccCccchHHHHHHHHH
Q 027804 32 TDLMKEQLATFRS------QLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVD-PLASNKGFWAELLGIGDFYYELGVQIV 104 (218)
Q Consensus 32 ~~~L~~QL~~F~~------~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVD-PLas~k~~ws~~lG~gdFyyeLaVqIv 104 (218)
+++|+..|+..++ ++.+..++.++++++|+. .+|++||++|||| |+++ ++||+ ++||||||||||+
T Consensus 10 f~DL~~LM~~Ak~mv~la~~~~~~~~~~~~~~~~~e~--~~f~~m~~slGvd~Pl~~-~~~~s----~~~f~~ELa~qi~ 82 (218)
T 3cuq_B 10 FEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDET--IRFKSYLLSMGIANPVTR-ETYGS----GTQYHMQLAKQLA 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCC----------CCS--HHHHHHHHHHTCCCHHHH-TTSSC----SCHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHH--HHHHHHHHHcCCCCcchh-hccCc----ccHHHHHHHHHHH
Confidence 6677777777775 222233333445566664 4799999999999 7775 68997 7999999999999
Q ss_pred HHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEEC-CEEEEEecCCCcchhHHHHH
Q 027804 105 EICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVG-KKKLVRSVPTELNKDHNQIL 183 (218)
Q Consensus 105 EvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig-~k~~vrSvP~ELs~Dq~~vL 183 (218)
|+|.+|++.|||||+|.||++++||+||. ..|||+||++||++|++||.||.+++++ |+++|+|+|.|++.||++|+
T Consensus 83 e~c~~~~~~~GG~I~L~dl~~~~nraRG~--~lVSp~Dl~~A~~~l~~Lg~~~~l~~~~sg~~vvqs~~~~~~~~~~~il 160 (218)
T 3cuq_B 83 GILQVPLEERGGIMSLTEVYCLVNRARGM--ELLSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASAL 160 (218)
T ss_dssp HHHHHHHHHTTSEEEHHHHHHHHHHTCSS--SCCCHHHHHHHHHTTTTTTCSEEEEECTTSBEEEEETTCCGGGGHHHHH
T ss_pred HHHHHHHHhCCCeEEHHHHHHHHHHHcCC--CCCCHHHHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCchHHHHHHHH
Confidence 99999999999999999999999999986 4899999999999999999999999998 79999999999999999999
Q ss_pred HHHhhcc
Q 027804 184 ELAQVTS 190 (218)
Q Consensus 184 e~a~~~~ 190 (218)
++|+..|
T Consensus 161 ~~~~~~g 167 (218)
T 3cuq_B 161 ETVSEKG 167 (218)
T ss_dssp HHHHHTS
T ss_pred HHHHHCC
Confidence 9999765
No 4
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=99.95 E-value=3.5e-28 Score=233.90 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=93.0
Q ss_pred CCcchhhhhccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHH------HHHHHHHHhhccccCChh--HHHHHHHHHHhc
Q 027804 3 RRPGIGGLQSAAVARDQYRLLGENVAKLRTDLMKEQLATFRS------QLEDFARKHKNDIRKNPT--FRSQFHEMCAKV 74 (218)
Q Consensus 3 R~vGi~ai~~~~~~~~~y~~~g~~l~~~~~~~L~~QL~~F~~------~L~~FA~kH~~eI~~dP~--FR~~F~~MC~si 74 (218)
+++||+||+++.+++.+-++...+-+ +++|++.|+..++ .+....++.+.+|..|.. =..+|+.+.
T Consensus 321 ~~~GI~gler~~e~~~~~~~~~i~~A---f~DL~~LM~~AkemV~La~~~~~~~~~~~~~~s~~~~~~e~~~~~s~L--- 394 (566)
T 1w7p_D 321 SRIGISSLEKSRENQLLNNDILFNNA---LTDLNKLMSLATSIERLYKNSNITMKTKTLNLQDESTVNEPKTRRPLL--- 394 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccchhhHhhHhhc---
Confidence 46899999999988888888777777 6677777777775 444444444455654321 112455544
Q ss_pred CCCCCCCCCCccccccC-ccchHHHHHHHHHHHhhhcc----cc-CCCcccHHHHHHHHHhh-cCCCCCCCCHHHHHHHH
Q 027804 75 GVDPLASNKGFWAELLG-IGDFYYELGVQIVEICLATR----PH-NGGLINLQELCNLLRQR-RKSNREAVSEDDCLRAI 147 (218)
Q Consensus 75 GVDPLas~k~~ws~~lG-~gdFyyeLaVqIvEvC~~tr----~~-NGGli~l~el~~~v~k~-rg~~~~~IS~dDI~rAi 147 (218)
|+. + +++| .+||||||||||+|+|.+++ ++ |||||+|.||++++||+ |+. ..+|||+||++||
T Consensus 395 ---~Vt-r-----d~~~s~~~f~~ELA~qI~E~c~~~~~~~l~~~nGGmItL~DL~~~~NRa~R~g-~elISp~Dll~A~ 464 (566)
T 1w7p_D 395 ---ILD-R-----EKFLNKELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDLYAMYNKSMRIG-TGLISPMEMREAC 464 (566)
T ss_dssp ----CC-S-----SCCCCHHHHHHHHHHHHHHHHHHTTCCSSCSCCCCEEEHHHHHHHHHHHTTTT-TCCCCHHHHHHHH
T ss_pred ---ccc-h-----hhcCChhHHHHHHHHHHHHHHHhhhcccchhcCcCeEEHHHHHHHHHHhccCC-CCccCHHHHHHHH
Confidence 443 4 3333 58999999999999999999 88 99999999999999999 942 2499999999999
Q ss_pred hhccccCCceE-EEEECCEEEEEecCCCcchhHHHHHHHHhhcc
Q 027804 148 SKLKVLGNGYE-VISVGKKKLVRSVPTELNKDHNQILELAQVTS 190 (218)
Q Consensus 148 ~~L~~LG~Gf~-vi~ig~k~~vrSvP~ELs~Dq~~vLe~a~~~~ 190 (218)
++|++||.||. +++++++.+|+++|.+ +.||++||++|+..+
T Consensus 465 ~~le~Lg~~~~~L~~~~sgvlVvs~~~~-~~~~~~il~l~~~~g 507 (566)
T 1w7p_D 465 ERFEHLGLNELKLVKVNKRILCVTSEKF-DVVKEKLVDLIGDNP 507 (566)
T ss_dssp TTGGGGTCTTCEEEECSSSCEEEESSCH-HHHHHHHHHHHTTST
T ss_pred HHHHHcCCCeEEEEEECCEEEEEcCCCc-hHHHHHHHHHHHhcC
Confidence 99999999999 9999988999999999 999999999998754
No 5
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=99.90 E-value=6.7e-24 Score=176.91 Aligned_cols=94 Identities=20% Similarity=0.259 Sum_probs=84.6
Q ss_pred ccchHHHHHHHHHHHhh---h-ccccCCC-cccHHHHHHHHHhh-cCCCCCCCCHHHHHHHHhhccccCCc-eEEEEECC
Q 027804 92 IGDFYYELGVQIVEICL---A-TRPHNGG-LINLQELCNLLRQR-RKSNREAVSEDDCLRAISKLKVLGNG-YEVISVGK 164 (218)
Q Consensus 92 ~gdFyyeLaVqIvEvC~---~-tr~~NGG-li~l~el~~~v~k~-rg~~~~~IS~dDI~rAi~~L~~LG~G-f~vi~ig~ 164 (218)
-.+||||||+||+|+|. + +++.||| ||+|.||++++||+ |+ ....|||+|+++||++|++||.| |.++++++
T Consensus 9 ~~~f~~ELa~qi~e~c~~~~~~~~~~~GG~~I~L~dl~~~~nra~R~-g~~lISp~Dl~~A~~~l~~Lg~~~~~l~~~~s 87 (169)
T 1u5t_B 9 KELFLDEIAREIYEFTLSEFKDLNSDTNYMIITLVDLYAMYNKSMRI-GTGLISPMEMREACERFEHLGLNELKLVKVNK 87 (169)
T ss_dssp STTHHHHHHHHHHHHHHTTTTTSSSCCCCCCEETTHHHHHHHHTTTS-SSCCCCHHHHHHHHTTTGGGTCCSCEEEEETT
T ss_pred hhHHHHHHHHHHHHHHhhcchhhHHhcCceeEEHHHHHHHHHHhhcC-CCCccCHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 37999999999999999 7 9999999 99999999999999 94 22499999999999999999999 99999998
Q ss_pred EEEEEecCCCcchhH--HHHHHHHhhc
Q 027804 165 KKLVRSVPTELNKDH--NQILELAQVT 189 (218)
Q Consensus 165 k~~vrSvP~ELs~Dq--~~vLe~a~~~ 189 (218)
+.+|+ .++++|+ ++|+++|+..
T Consensus 88 g~~V~---~~~~~d~~~~~il~~~~~~ 111 (169)
T 1u5t_B 88 RILCV---TSEKFDVVKEKLVDLIGDN 111 (169)
T ss_dssp TEEEE---ESSCSHHHHHHHHHHHHHS
T ss_pred eeEEE---eCCChhHHHHHHHHHHHhc
Confidence 77777 3666666 9999999865
No 6
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=90.80 E-value=2.2 Score=32.92 Aligned_cols=94 Identities=13% Similarity=0.296 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHH--HhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccC
Q 027804 37 EQLATFRSQLEDFAR--KHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHN 114 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~--kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~N 114 (218)
+|++.||++...|=. .+.+.|..+ .|+.++.++|++|-.. + |-++ ...-..+
T Consensus 6 eqi~elre~F~~fD~~~d~dG~I~~~-----El~~~lr~lG~~~t~~------e--------------l~~~-~~~d~~~ 59 (159)
T 3i5g_C 6 DEIEEVREVFDLFDFWDGRDGDVDAA-----KVGDLLRCLGMNPTEA------Q--------------VHQH-GGTKKMG 59 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSCEEGG-----GHHHHHHHTTCCCCHH------H--------------HHTT-TCCSSTT
T ss_pred HHHHHHHHHHHHHCcCCCCCCeECHH-----HHHHHHHHcCCCCCHH------H--------------HHHH-HcccccC
Confidence 467778888888865 345678755 3667888999987421 0 0111 1122234
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.|-|+++|.+..+.+..... ..-++++|.+|-+.+-.=|+|+
T Consensus 60 ~g~i~f~eFl~~~~~~~~~~-~~~~~~~l~~aF~~fD~d~~G~ 101 (159)
T 3i5g_C 60 EKAYKLEEILPIYEEMSSKD-TGTAADEFMEAFKTFDREGQGL 101 (159)
T ss_dssp SCEECHHHHHHHHHHHTTCC-TTCCHHHHHHHHHHHCTTSSSE
T ss_pred CCcccHHHHHHHHHHhhccc-ccchHHHHHHHHHHHhcCCCCc
Confidence 46666666666555433221 2345666666666666666664
No 7
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=90.76 E-value=1.5 Score=32.85 Aligned_cols=38 Identities=21% Similarity=0.468 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
+|++.+++....|=.++.+.|..+. |..++.++|.+|.
T Consensus 7 eqi~el~~~F~~~D~d~~G~I~~~E-----l~~~l~~~~~~~~ 44 (148)
T 2lmt_A 7 EQIAEFKDAFVQFDKEGTGKIATRE-----LGTLMRTLGQNPT 44 (148)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEGGG-----HHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHcCCCCCeECHHH-----HHHHHHhcCCCch
Confidence 4667788888889889999998763 6678888998875
No 8
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=89.00 E-value=0.95 Score=33.45 Aligned_cols=110 Identities=14% Similarity=0.189 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCcc---ccccCccchHHHHH---------HHHH
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFW---AELLGIGDFYYELG---------VQIV 104 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~w---s~~lG~gdFyyeLa---------VqIv 104 (218)
++..++.....|-..+.+.|..+ .|+.++.++|.+|-... ...+ ...+...+|..-+. ..+.
T Consensus 14 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 88 (153)
T 2ovk_B 14 QMQELKEAFTMIDQDRDGFIGME-----DLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDALR 88 (153)
T ss_dssp HHHHHHHHHHHHCCSTTTCCCHH-----HHHHHTTTTTSCCCHHHHHHHHHHSSSCCCSHHHHHTTTTTTTTCCCTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCeECHH-----HHHHHHHHhCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhccCChHHHHH
Confidence 44555666666666666666643 56677778887664100 0000 11112223322222 1233
Q ss_pred HHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 105 EICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 105 EvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++...--..+-|.|+.+|+...+... | ..+|++++...++.+.+ |+|.
T Consensus 89 ~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~-~dg~ 136 (153)
T 2ovk_B 89 NAFSMFDEDGQGFIPEDYLKDLLENM-G---DNFSKEEIKNVWKDAPL-KNKQ 136 (153)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHS-S---SCCCHHHHHHHHHHCCE-ETTE
T ss_pred HHHHHHCCCCCCeEcHHHHHHHHHHc-C---CCCCHHHHHHHHHHcCC-CCCE
Confidence 44443333456999999999988874 2 35899999999999888 8773
No 9
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=88.62 E-value=2.8 Score=30.20 Aligned_cols=97 Identities=16% Similarity=0.263 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGG 116 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGG 116 (218)
.|+..++.....|-..+.+.|..+ .|..++.++|..|-.. -..+++..+ ...+.|||
T Consensus 5 ~~~~~l~~~F~~~D~~~~G~i~~~-----el~~~l~~~~~~~~~~-----------------~~~~l~~~~-~~~d~~~g 61 (149)
T 2mys_C 5 AAADDFKEAFLLFDRTGDAKITAS-----QVGDIARALGQNPTNA-----------------EINKILGNP-SKEEMNAA 61 (149)
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHhCCCCCHH-----------------HHHHHHHHh-hhccccCC
Confidence 345556666777777777777643 5667788888765320 011122222 12244557
Q ss_pred cccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 117 LINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 117 li~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.|+..|.+..+....... ..-+.+.+..+.+.+.+=|+|+
T Consensus 62 ~i~~~eF~~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~ 101 (149)
T 2mys_C 62 AITFEEFLPMLQAAANNK-DQGTFEDFVEGLRVFDKEGNGT 101 (149)
T ss_pred cCcHHHHHHHHHHHhccC-CcchHHHHHHHHHHhCCCCCce
Confidence 788888777666541110 1234555555555555545553
No 10
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=88.06 E-value=5.8 Score=28.51 Aligned_cols=111 Identities=16% Similarity=0.259 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHH---------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELG--------- 100 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLa--------- 100 (218)
++..++.....|-..+.+.|..+ .|..++.++|..|.... ...|. ..+...+|..-+.
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 83 (153)
T 3ox6_A 9 EIEELREAFREFDKDKDGYINCR-----DLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETAD 83 (153)
T ss_dssp HHHHHHHHHHHHHHHCSSSCCHH-----HHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccc
Confidence 44556666666777777777653 56677777887654210 00111 1112234433222
Q ss_pred ----HHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 101 ----VQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 101 ----VqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+.++...--..+.|.|+.+|+...+...-| ..+|++++...++.+..=+.|
T Consensus 84 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~---~~~~~~~~~~~~~~~d~~~dg 140 (153)
T 3ox6_A 84 MIGVKELRDAFREFDTNGDGEISTSELREAMRALLG---HQVGHRDIEEIIRDVDLNGDG 140 (153)
T ss_dssp HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHS---SCCCHHHHHHHHHHHCSSSSS
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc---CCCCHHHHHHHHHHhCCCCCC
Confidence 12222222222334588888888888776333 247888887777776554444
No 11
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=87.24 E-value=4.4 Score=29.64 Aligned_cols=109 Identities=13% Similarity=0.257 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHH--------H
Q 027804 39 LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGV--------Q 102 (218)
Q Consensus 39 L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaV--------q 102 (218)
+..++.....|-..+.+.|..+ .|..++.++|+.|-... ...|. ..+...+|..-+.. +
T Consensus 22 ~~~l~~~F~~~D~~~~G~i~~~-----e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 96 (161)
T 3fwb_A 22 KQEIYEAFSLFDMNNDGFLDYH-----ELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96 (161)
T ss_dssp HHHHHHHHHHHCTTSSSEECHH-----HHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHH
Confidence 3445555556666666666654 46677777787654110 00111 11222344433332 2
Q ss_pred HHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 103 IVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 103 IvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
-+.-+...-+.| -|.|+.+|+...+... + ..+|++++...++.+..=+.|
T Consensus 97 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~-~---~~~~~~~~~~~~~~~d~~~~g 147 (161)
T 3fwb_A 97 EIKRAFQLFDDDHTGKISIKNLRRVAKEL-G---ETLTDEELRAMIEEFDLDGDG 147 (161)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT-T---CCCCHHHHHHHHHTTCSSSSS
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 223333334444 4899999998888764 2 358888888888877654555
No 12
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=84.59 E-value=1.8 Score=33.19 Aligned_cols=106 Identities=14% Similarity=0.204 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccccc---cCccchHHHHH---------HHH
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWAEL---LGIGDFYYELG---------VQI 103 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws~~---lG~gdFyyeLa---------VqI 103 (218)
+|++.+++....|=+++.+.|..+ .|...+.++|.+|.... ...+... .....|...++ ..+
T Consensus 13 ~qi~elk~~F~~~D~d~dG~I~~~-----El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l 87 (153)
T 3i5g_B 13 RQMQELKEAFTMIDQDRDGFIGME-----DLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEKVSGTDPEDAL 87 (153)
T ss_dssp HHHHHHHHHHHHHCCSTTSCCCHH-----HHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHHTTTTTTTTCCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHH-----HHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHHHHHhhhcccccHHHH
Confidence 466778888888888888888765 46788888999887210 0011110 11223332221 123
Q ss_pred HHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 104 VEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 104 vEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
.++-..-=..+-|.|+..||...+... | ..+|+++|..-++..-
T Consensus 88 ~~aF~~fD~d~~G~I~~~el~~~l~~~-g---~~ls~~ei~~~~~~~D 131 (153)
T 3i5g_B 88 RNAFSMFDEDGQGFIPEDYLKDLLENM-G---DNFSKEEIKNVWKDAP 131 (153)
T ss_dssp HHHHHTTCSSCSSCCCHHHHHHHHHSS-S---SCCCHHHHHHHHTTCC
T ss_pred HHHHhccccCCCCeEeHHHHHHHHHHc-C---CcCCHHHHHHHHHHhC
Confidence 333333323445899999998887653 3 3589999887777654
No 13
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=84.39 E-value=10 Score=27.88 Aligned_cols=38 Identities=13% Similarity=0.389 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHH--HHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 37 EQLATFRSQLEDFA--RKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 37 ~QL~~F~~~L~~FA--~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
+|++.++.....|- ..+.+.|..+ .|..++.++|..|-
T Consensus 6 ~~~~~l~~~F~~~D~~~d~~G~i~~~-----el~~~l~~lg~~~~ 45 (159)
T 2ovk_C 6 DEIEEVREVFDLFDFWDGRDGDVDAA-----KVGDLLRCLGMNPT 45 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSEEEGG-----GHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCcHH-----HHHHHHHHcCCCCC
Confidence 35566677777776 7788888765 46677788898764
No 14
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=83.64 E-value=3.9 Score=29.78 Aligned_cols=104 Identities=16% Similarity=0.235 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHh-hccccCChhHHHHHHHHHHhcCCCCCCCC-CC----ccccccCccchHHHHHH--------H
Q 027804 37 EQLATFRSQLEDFARKH-KNDIRKNPTFRSQFHEMCAKVGVDPLASN-KG----FWAELLGIGDFYYELGV--------Q 102 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH-~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~----~ws~~lG~gdFyyeLaV--------q 102 (218)
+++..++.....|-.++ .+.|..+ .|+.++.++|.+|-... .. +..+ +...+|..-+.. .
T Consensus 11 ~~~~~l~~~F~~~D~d~~~G~i~~~-----el~~~l~~~g~~~~~~~~~~l~~~~d~~-i~~~eF~~~~~~~~~~~~~~~ 84 (146)
T 2qac_A 11 EEKVDESDVRIYFNEKSSGGKISID-----NASYNARKLGLAPSSIDEKKIKELYGDN-LTYEQYLEYLSICVHDKDNVE 84 (146)
T ss_dssp HHHSCHHHHHHHHHHHCBTTBEEHH-----HHHHHHHHTTCCCCHHHHHHHHHHHCSE-ECHHHHHHHHHHTCCTTCCHH
T ss_pred HHHHHHHHHHHHhCccCCCCcccHH-----HHHHHHHHhCCCCCHHHHHHHHHHhCCC-CCHHHHHHHHHHHhcCcchHH
Confidence 35555667777777777 7777643 56677778887764110 00 1111 233344332221 1
Q ss_pred HHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhc
Q 027804 103 IVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKL 150 (218)
Q Consensus 103 IvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L 150 (218)
-+.-+-..-+.| -|.|+.+|+...+... | ..+|++++...++.+
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTW-G---DALTDQEAIDALNAF 129 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHHHHS-S---SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHh-C---CCCCHHHHHHHHHHc
Confidence 222333334444 4899999999888764 3 358999998888877
No 15
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=82.99 E-value=10 Score=28.02 Aligned_cols=110 Identities=15% Similarity=0.265 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHH--------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGV-------- 101 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaV-------- 101 (218)
++..++.....|-..+.+.|..+ .|..++.++|+.|-... ...|. ..+...+|..-+..
T Consensus 26 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 100 (169)
T 3qrx_A 26 QKQEIREAFDLFDTDGSGTIDAK-----ELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSR 100 (169)
T ss_dssp HHHHHHHHHHHHCTTCCSEECHH-----HHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcH
Confidence 34555666666666666666653 56677777887654100 00110 01112344333321
Q ss_pred -HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 -QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 -qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.++...--..+-|.|+.+|+...+... + ..+|++++...++.+..=|.|
T Consensus 101 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~~D~~~dg 152 (169)
T 3qrx_A 101 EEILKAFRLFDDDNSGTITIKDLRRVAKEL-G---ENLTEEELQEMIAEADRNDDN 152 (169)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCCSSSS
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 23333333333456888999988887763 2 358888888877776554444
No 16
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=82.70 E-value=10 Score=27.65 Aligned_cols=110 Identities=17% Similarity=0.353 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCcc-------ccccCccchHHHHHH--------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFW-------AELLGIGDFYYELGV-------- 101 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~w-------s~~lG~gdFyyeLaV-------- 101 (218)
++..++.....|-.++.+.|..+ .|..++.++|.+|-... ...+ ...+...+|..-+..
T Consensus 8 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 82 (148)
T 1exr_A 8 QIAEFKEAFALFDKDGDGTITTK-----ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE 82 (148)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcH
Confidence 44556666666777777777643 56677777887764100 0000 001122344332221
Q ss_pred -HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 -QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 -qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.++...-=..+.|.|+.+|+...+... | ..+|++++...++.+..=|.|
T Consensus 83 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~d~dg 134 (148)
T 1exr_A 83 EELIEAFKVFDRDGNGLISAAELRHVMTNL-G---EKLTDDEVDEMIREADIDGDG 134 (148)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCSSSSS
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 22233332223345888888888877653 2 257888888777766544444
No 17
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=82.56 E-value=12 Score=27.27 Aligned_cols=111 Identities=18% Similarity=0.254 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHH--HhhccccCChhHHHHHHHHHHhcCCCCCCCC----CCcc---ccccCccchHHHHHH------
Q 027804 37 EQLATFRSQLEDFAR--KHKNDIRKNPTFRSQFHEMCAKVGVDPLASN----KGFW---AELLGIGDFYYELGV------ 101 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~--kH~~eI~~dP~FR~~F~~MC~siGVDPLas~----k~~w---s~~lG~gdFyyeLaV------ 101 (218)
.|+..++.....|-. .+.+.|..+ .|..++.++|..|-... ..+- ...+...+|..-+..
T Consensus 6 ~~~~~l~~~F~~~D~~~d~~G~i~~~-----el~~~l~~~g~~~~~~~~~~l~~~D~~~~g~i~~~eF~~~~~~~~~~~~ 80 (156)
T 1wdc_C 6 DEIDDLKDVFELFDFWDGRDGAVDAF-----KLGDVCRCLGINPRNEDVFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQ 80 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCEEGG-----GHHHHHHHTTCCCCHHHHHHTTCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHccCCCCCCCCcHH-----HHHHHHHHcCCCCCHHHHHHHHhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence 345667777778888 788888765 46677788888764110 0110 001122333322221
Q ss_pred ---HHHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhh--ccccCCc
Q 027804 102 ---QIVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISK--LKVLGNG 156 (218)
Q Consensus 102 ---qIvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~--L~~LG~G 156 (218)
+-+.-+-..-+.| -|.|+.+|+...+... | ..+|++++...++. +.+=|.|
T Consensus 81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~~~D~d~dg 137 (156)
T 1wdc_C 81 GTFADYMEAFKTFDREGQGFISGAELRHVLTAL-G---ERLSDEDVDEIIKLTDLQEDLEG 137 (156)
T ss_dssp CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS-S---SCCCHHHHHHHHHHHTCCCCTTS
T ss_pred ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCCCHHHHHHHHHHhCCCCCCCC
Confidence 1222233333444 4899999998888764 2 25888888888887 6554555
No 18
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=82.08 E-value=2.8 Score=30.25 Aligned_cols=111 Identities=17% Similarity=0.322 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc---cccCccchHHHHHH--------HHH
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA---ELLGIGDFYYELGV--------QIV 104 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws---~~lG~gdFyyeLaV--------qIv 104 (218)
.|+..++.....|-..+.+.|..+ .|..++.++|.+|-... ...+. ..+...+|..-+.. +-+
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l 78 (143)
T 3j04_B 4 SQIQEFKEAFNMIDQNRDGFIDKE-----DLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVI 78 (143)
T ss_dssp HHHHHHHHHHTTTCSSCTTCCCHH-----HHHHHHHHTSCCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCcCHH-----HHHHHHHHhCCCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHH
Confidence 355666666666666667777644 57788888998764200 01111 11222344333332 112
Q ss_pred HHhhhcccc-CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 105 EICLATRPH-NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 105 EvC~~tr~~-NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.-+-..-+. +-|.|+.+|+...+... | ..+|++++...++.+.+=|.|
T Consensus 79 ~~~F~~~D~d~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dg 127 (143)
T 3j04_B 79 RNAFACFDEEASGFIHEDHLRELLTTM-G---DRFTDEEVDEMYREAPIDKKG 127 (143)
T ss_dssp HHHHTTSCSSSCCCCCTTTHHHHHHTS-S---SCCCHHHHHHHHHHTTCCSSS
T ss_pred HHHHHHHCCCCCCeEcHHHHHHHHHHc-C---CCCCHHHHHHHHHHcCCCCCC
Confidence 222333333 34778888887777653 2 247777777777766544444
No 19
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=81.07 E-value=13 Score=26.53 Aligned_cols=109 Identities=17% Similarity=0.347 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHH---------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELG--------- 100 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLa--------- 100 (218)
++..++.....|-..+.+.|..+ .|+.++.++|..|-... ...|. ..+...+|..-+.
T Consensus 9 ~~~~l~~~F~~~D~~~~G~i~~~-----e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 83 (147)
T 4ds7_A 9 QIAEFKEAFALFDKDNSGSISAS-----ELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSE 83 (147)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHH-----HHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcH
Confidence 45556666666666666667643 56677777887653100 00111 0111234433332
Q ss_pred HHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 101 VQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 101 VqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+.++...--..+.|.|+.+|+...+... + ..+|++++...++.+. =|.|
T Consensus 84 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-~---~~~~~~~~~~~~~~~d-~~dg 134 (147)
T 4ds7_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSI-G---EKLTDAEVDEMLREVS-DGSG 134 (147)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHT-T---CCCCHHHHHHHHHHHS-SSCS
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHc-C---CCCCHHHHHHHHHHhc-CCCC
Confidence 122333333323345889999998888753 2 3588888888777775 3444
No 20
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=80.54 E-value=7.8 Score=28.26 Aligned_cols=110 Identities=18% Similarity=0.350 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHH--------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGV-------- 101 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaV-------- 101 (218)
++..++.....|-.++.+.|..+ .|..++.++|..|-... ...|. ..+...+|..-+..
T Consensus 18 ~~~~l~~~F~~~D~d~~G~i~~~-----e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 92 (162)
T 1top_A 18 MIAEFKAAFDMFDADGGGDISTK-----ELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG 92 (162)
T ss_dssp HHHHHHHHHHTTTCSCSSEEEGG-----GHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHH-----HHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcccccc
Confidence 34555666666777777777654 46677777887654100 00111 01122344333221
Q ss_pred ---HHHHHhhhccc-cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 ---QIVEICLATRP-HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 ---qIvEvC~~tr~-~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+.-+...-+ .+-|.|+.+|+...+... | ..+|++++...++.+..=|+|
T Consensus 93 ~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g---~~~~~~~~~~~~~~~d~~~dg 147 (162)
T 1top_A 93 KSEEELANCFRIFDKNADGFIDIEELGEILRAT-G---EHVTEEDIEDLMKDSDKNNDG 147 (162)
T ss_dssp HHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT-T---CCCCHHHHHHHHHHHCTTCSS
T ss_pred ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 11222233333 334777777777776653 2 246777776666665443333
No 21
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=79.76 E-value=8.8 Score=29.42 Aligned_cols=67 Identities=10% Similarity=0.183 Sum_probs=53.5
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc-ccCCceEEEEECCEEEEEecCCCcchhHHHHHHHH
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK-VLGNGYEVISVGKKKLVRSVPTELNKDHNQILELA 186 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~-~LG~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vLe~a 186 (218)
--|.++++++++++...... .+|++|++.=++.|. .+-.=+++.+|....|++ + .=+.|.+.|++-.
T Consensus 30 kK~vl~~e~~~~ki~~Syr~---~ls~~EmE~hl~lL~ellPdWls~~~vR~~~ylK-l--~k~~dl~~i~~rL 97 (106)
T 3a4c_A 30 RKPALTMEVVCARMVDSCQT---ALSPGEMEKHLVLLAELLPDWLSLHRIRTDTYVK-L--DKAVDLAGLTARL 97 (106)
T ss_dssp SSSEEEHHHHHHHHHHTSCC---SCCHHHHHHHHHHHHHHCTTTEEEEEETTEEEEE-E--CTTSCHHHHHHHH
T ss_pred ccCCccHHHHHHHHHhhhhc---cCCHHHHHHHHHHHHHhCcchheeeeeeccceee-e--ehhhhHHHHHHHH
Confidence 35899999999999886654 499999999999995 556668899999999998 4 3356777776543
No 22
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=79.65 E-value=11 Score=27.59 Aligned_cols=111 Identities=16% Similarity=0.283 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CC----cc---ccccCccchHHHHHHHH-----
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KG----FW---AELLGIGDFYYELGVQI----- 103 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~----~w---s~~lG~gdFyyeLaVqI----- 103 (218)
.|...++.....|-+++.+.|..+ .|..++.++|.+|-... .. +. ...+...+|..-+...+
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~I~~~-----el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~ 77 (143)
T 2obh_A 3 EQKQEIREAFDLFDADGTGTIDVK-----ELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDT 77 (143)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEGG-----GHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccH
Confidence 356667777777777777777765 35567777887764100 00 00 00112234543332211
Q ss_pred ---HHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 104 ---VEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 104 ---vEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.-.-..-+.+ -|.|+.+|+...+... | ..+|++++...++.+..=|.|
T Consensus 78 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dG 130 (143)
T 2obh_A 78 KEEILKAFKLFDDDETGKISFKNLKRVAKEL-G---ENLTDEELQEMIDEADRDGDG 130 (143)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCTTSSS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 11122233444 4889999998877653 2 248888888888777655555
No 23
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=78.90 E-value=5.6 Score=31.03 Aligned_cols=110 Identities=17% Similarity=0.344 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-----CCcccc---ccCccchHHHH---------
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-----KGFWAE---LLGIGDFYYEL--------- 99 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-----k~~ws~---~lG~gdFyyeL--------- 99 (218)
+|++.+++....|=.++.+.|..+ .|...+.++|.+|-... ..+..+ .+...+|..-+
T Consensus 8 eqi~elk~~F~~~D~d~dG~I~~~-----El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 8 EQIAEFKEAFALFDKDNNGSISSS-----ELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp TGGGHHHHHHHTTCSSCSSCBCHH-----HHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 355667777777777777777654 36677788888875100 000000 01122332221
Q ss_pred HHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 100 GVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 100 aVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
-.++.++...-=..+-|.|+.+||...+... + ..+|+++|..-++... =|+|
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~-g---~~~~~~ei~~l~~~~d-d~dG 134 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSI-G---EKLTDAEVDDMLREVS-DGSG 134 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTT-T---CCCCHHHHHHHHHHHH-TTSS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc-C---cccchHHHHHHHHhhc-CCCC
Confidence 1234444444444566899999999888753 2 3589999888777765 3454
No 24
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=78.55 E-value=1.7 Score=30.06 Aligned_cols=34 Identities=21% Similarity=0.562 Sum_probs=27.7
Q ss_pred ccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccC
Q 027804 112 PHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG 154 (218)
..|||++.++++-..+ -|+.|||..+++.|+.=|
T Consensus 20 r~sGGildI~~~a~ky---------gV~kdeV~~~LrrLe~KG 53 (59)
T 2xvc_A 20 VNNGGFLDIEHFSKVY---------GVEKQEVVKLLEALKNKG 53 (59)
T ss_dssp HHTTSEEEHHHHHHHH---------CCCHHHHHHHHHHHHHTT
T ss_pred HHcCCEEeHHHHHHHh---------CCCHHHHHHHHHHHHHCC
Confidence 4689999998876654 299999999999998644
No 25
>2kmu_A ATP-dependent DNA helicase Q4; recql4, DNA-replication, homeodomain-like, ATP-BIN cataract, craniosynostosis, disease mutation, dwarfism; NMR {Homo sapiens}
Probab=78.43 E-value=3.8 Score=27.94 Aligned_cols=37 Identities=22% Similarity=0.433 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-----cccCChh-HHHHHHHHH
Q 027804 32 TDLMKEQLATFRSQLEDFARKHKN-----DIRKNPT-FRSQFHEMC 71 (218)
Q Consensus 32 ~~~L~~QL~~F~~~L~~FA~kH~~-----eI~~dP~-FR~~F~~MC 71 (218)
+.++...|..... +|+.+|+. ||+.||+ .+.+++.+-
T Consensus 6 ~~~lk~~LK~WE~---~F~~~~GRkP~k~DIk~~p~~I~~~YK~Y~ 48 (56)
T 2kmu_A 6 LRDVRERLQAWER---AFRRQRGRRPSQDDVEAAPEETRALYREYR 48 (56)
T ss_dssp HHHHHHHHHHHHH---HHHHHTCSCCCHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHHHHhCCCCCHHHHHcCHHHHHHHHHHHH
Confidence 4455555555543 57888865 7999999 999998874
No 26
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=78.37 E-value=15 Score=26.78 Aligned_cols=105 Identities=10% Similarity=0.173 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc---cccCccchHHHHHH--------HHHH
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA---ELLGIGDFYYELGV--------QIVE 105 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws---~~lG~gdFyyeLaV--------qIvE 105 (218)
++..++.....|-..+.+.|.. ..|..++.++|..|-... ...+. ..+...+|..-+.. .-+.
T Consensus 16 ~~~~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 90 (156)
T 1wdc_B 16 QIQEMKEAFSMIDVDRDGFVSK-----EDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDKLSGTDSEETIR 90 (156)
T ss_dssp HHHHHHHHHHHHCTTCSSSCCH-----HHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHHHHHHHTCSCCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcH-----HHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHHHHHHHhcCCChHHHHH
Confidence 4555666667777777777764 357778888888764200 00111 11122344333321 1122
Q ss_pred Hhhhcccc-CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 106 ICLATRPH-NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 106 vC~~tr~~-NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
-+-..-+. +-|.|+.+|+...+... | ..+|++++...++.+.
T Consensus 91 ~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d 133 (156)
T 1wdc_B 91 NAFAMFDEQETKKLNIEYIKDLLENM-G---DNFNKDEMRMTFKEAP 133 (156)
T ss_dssp HHHHTTCTTCCSCEEHHHHHHHHHHS-S---SCCCHHHHHHHHHHCC
T ss_pred HHHHHHCcCCCCccCHHHHHHHHHHh-C---CCCCHHHHHHHHHhcC
Confidence 22333343 34888888888887763 2 2478888877777653
No 27
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=77.70 E-value=8.6 Score=28.05 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=24.5
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.|.|+.+|+...+... + +|++++...++.+.+=|.|
T Consensus 111 ~~G~i~~~E~~~~l~~~-~-----~~~~~~~~~~~~~D~d~dg 147 (166)
T 3akb_A 111 GDGAVTVADTARALTAF-G-----VPEDLARQAAAALDTDGDG 147 (166)
T ss_dssp SSSCCBHHHHHHHHHHT-T-----CCHHHHHHHHHHHCTTCSS
T ss_pred CCCcCCHHHHHHHHHHh-C-----CCHHHHHHHHHHhCCCCCC
Confidence 34788888887777653 1 6777777777766554444
No 28
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=77.63 E-value=0.76 Score=31.63 Aligned_cols=40 Identities=23% Similarity=0.425 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCC
Q 027804 34 LMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 34 ~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLa 80 (218)
....||+.|++--.... .+|..+|--.++||-++.||-..
T Consensus 19 kfkn~lqh~r~vaaaks-------~en~rlr~l~kqmcpsldvdsii 58 (63)
T 2c9l_Y 19 KFKQLLQHYREVAAAKS-------SENDRLRLLLKQMCPSLDVDSII 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCTTCCHHHHS
T ss_pred HHHHHHHHHHHHHHhhc-------ccchHHHHHHHHhCCcccccccC
Confidence 45566666665443333 36788999999999999999443
No 29
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=77.09 E-value=3.4 Score=39.21 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=43.9
Q ss_pred HHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccc----cc------cCccchHH-HHHHHHHHHhhhccccCC
Q 027804 47 EDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWA----EL------LGIGDFYY-ELGVQIVEICLATRPHNG 115 (218)
Q Consensus 47 ~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws----~~------lG~gdFyy-eLaVqIvEvC~~tr~~NG 115 (218)
..........++++|.++.-|. .=| .|+....-+.. +. -|...||. ++|.+|++-.+ .+|
T Consensus 150 a~~~~~~~~~l~~~~~~~~~f~----~~G-~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~----~~G 220 (516)
T 2i3o_A 150 SDSIARSAPVIGQYRGWSSIFM----PNG-SVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLE----GTG 220 (516)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHS----TTS-SCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTT----TTC
T ss_pred HHHHHHHHHHhhcChhHHhhhc----cCC-ccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHH----HcC
Confidence 3333344455777888877662 223 34433211110 11 15678886 89999999886 479
Q ss_pred CcccHHHHHHH
Q 027804 116 GLINLQELCNL 126 (218)
Q Consensus 116 Gli~l~el~~~ 126 (218)
|+|+++||-..
T Consensus 221 G~lt~~DLa~y 231 (516)
T 2i3o_A 221 SPLSDRDLRVY 231 (516)
T ss_dssp CCCCHHHHHHC
T ss_pred CCCCHHHHhhC
Confidence 99999999653
No 30
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=77.07 E-value=5.1 Score=37.59 Aligned_cols=38 Identities=21% Similarity=0.450 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
+|++.+|+....|=+++.+.|..+ .|++++.++|++|-
T Consensus 299 EEI~ELREaF~~fDkDgdG~IS~e-----ELk~aLrsLG~~~T 336 (440)
T 3u0k_A 299 EQIAEFKEAFSLFDKDGDGTITTK-----ELGTVMRSLGQNPT 336 (440)
T ss_dssp HHHHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHcCCCCCEECHH-----HHHHHHHHcCCCCC
Confidence 578888888889988888888765 46677888898864
No 31
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=76.38 E-value=19 Score=26.50 Aligned_cols=110 Identities=13% Similarity=0.159 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCC-CCCCCC-CCccc---cccCccchHHHHHH--------HHH
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGV-DPLASN-KGFWA---ELLGIGDFYYELGV--------QIV 104 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGV-DPLas~-k~~ws---~~lG~gdFyyeLaV--------qIv 104 (218)
++..++.....|-..+.+.|..+ .|..++.++|. +|-... ...+. ..+...+|..-+.. +-+
T Consensus 23 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~~~~~~~l~~~~dg~i~~~eF~~~~~~~~~~~~~~~~l 97 (166)
T 2mys_B 23 EIEDFKEAFTVIDQNADGIIDKD-----DLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVI 97 (166)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHH-----HHHHHHHHhCCCCCCHHHHHHHHHHCCCCcCHHHHHHHHHHHhccCCcHHHH
Confidence 45556666667766776667543 57788888888 654200 00111 11222344332222 112
Q ss_pred HHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 105 EICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 105 EvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.-+-..-+.| -|.|+.+|+...+... | ..+|++++...++.+..=|.|
T Consensus 98 ~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dg 146 (166)
T 2mys_B 98 MGAFKVLDPDGKGSIKKSFLEELLTTG-G---GRFTPEEIKNMWAAFPPDVAG 146 (166)
T ss_pred HHHHHHhCCCCCcceeHHHHHHHHHHc-C---CCCCHHHHHHHHHhcCCCCCC
Confidence 2223333444 4888888888888763 2 247888888877776544444
No 32
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=76.11 E-value=19 Score=26.44 Aligned_cols=42 Identities=7% Similarity=0.115 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
.|+..++.....|-..+.+.|..+ +|+..++++....|.+|-
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~-El~~~l~~~~~~~g~~~~ 44 (174)
T 1q80_A 3 LWVQKMKTYFNRIDFDKDGAITRM-DFESMAERFAKESEMKAE 44 (174)
T ss_dssp HHHHHHHHHHHHHCTTCSSEESHH-HHHHHHHHHHHHSSCCTT
T ss_pred HHHHHHHHHHHhcCCCCCCcEeHH-HHHHHHHHHHHHhCCCCC
Confidence 345556666667766677777544 455444444444447654
No 33
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=73.61 E-value=23 Score=26.34 Aligned_cols=111 Identities=14% Similarity=0.316 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHHH-------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGVQ------- 102 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaVq------- 102 (218)
++..++.....|-.++.+.|..+ .|..++.++|.+|-... ...|. ..+...+|..-+...
T Consensus 9 ~~~~l~~~F~~~D~d~~G~i~~~-----e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~ 83 (179)
T 2f2o_A 9 QIAEFKEAFSLFDKDGDGTITTK-----ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 83 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHH-----HHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccH
Confidence 34455566666666676667643 56677777887654110 00110 112234554333221
Q ss_pred -HHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 103 -IVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 103 -IvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
-+.-+...-+.| -|.|+.+|+...+... + ..+|++++...++.+.+=|.|.
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~-g---~~~~~~~~~~~~~~~D~~~dg~ 136 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNL-G---EKLTDEEVDEMIREADIDGDGQ 136 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC------CCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHcCCCCCCc
Confidence 123333444444 4899999999888764 2 3588999888888876655553
No 34
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=73.19 E-value=14 Score=28.69 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCcc---ccccCccchHHHHHH---------HHH
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFW---AELLGIGDFYYELGV---------QIV 104 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~w---s~~lG~gdFyyeLaV---------qIv 104 (218)
++..++.....|-..+.+.|..+ .|..++.++|++|-... ..+| ...+...+|..-+.. .+.
T Consensus 55 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 129 (196)
T 3dtp_E 55 QVQEFKEAFQLIDQDKDGFISKN-----DIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIV 129 (196)
T ss_dssp THHHHHHHHHHHCCSCSSBCCHH-----HHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHHHHHHCCCSSCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHH-----HHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHHHHHHHhcCCCcHHHHH
Confidence 34455566666666666666643 57788888897764210 0111 111223444443332 233
Q ss_pred HHhhhcccc-CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 105 EICLATRPH-NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 105 EvC~~tr~~-NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
++. ..-+. +-|.|+.+|+...+ . -| ..+|++++...++.+..=|+|
T Consensus 130 ~~F-~~~D~d~~G~Is~~El~~~l-~-~g---~~~~~~~~~~l~~~~D~d~dG 176 (196)
T 3dtp_E 130 NAF-NLFDEGDGKCKEETLKRSLT-T-WG---EKFSQDEVDQALSEAPIDGNG 176 (196)
T ss_dssp HHH-HTTCSSSSCCBHHHHHHHHH-H-SS---SCCCHHHHHHHHHSSCEETTE
T ss_pred HHH-HHHCCCCCCcCcHHHHHHHH-H-cC---CCCCHHHHHHHHHHcCCCCCC
Confidence 333 33344 45999999999988 5 33 358999988888777554454
No 35
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=72.97 E-value=18 Score=26.58 Aligned_cols=110 Identities=7% Similarity=0.079 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccC-C
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHN-G 115 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~N-G 115 (218)
.|+..++.....|-.++.+.|..+ +|+....+++.++|.+|-... +.+.+ +...+.++-....-+.| .
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~-el~~~~~~~l~~~g~~~~~~~---------~~~l~-~~~~~~~~~lf~~~D~d~d 72 (176)
T 1nya_A 4 IASDRLKKRFDRWDFDGNGALERA-DFEKEAQHIAEAFGKDAGAAE---------VQTLK-NAFGGLFDYLAKEAGVGSD 72 (176)
T ss_dssp HHHHHHHHHHHHCCSSCCSSBCSH-HHHHHHHHHHHHTSSCSSSHH---------HHHHH-HHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHcCCCCCcccHH-HHHHHHHHHHHHcCCCCCcHH---------HHHHH-HHHHHHHHHHHHHhCCCCC
Confidence 345566666777777777777654 566555557888998875311 01111 11111122222233333 4
Q ss_pred CcccHHHHHHHHHhhcCCCCC----CCCHHHHHHHHhhccccCCce
Q 027804 116 GLINLQELCNLLRQRRKSNRE----AVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 116 Gli~l~el~~~v~k~rg~~~~----~IS~dDI~rAi~~L~~LG~Gf 157 (218)
|.|+.+|....+.+....... ....+.+..+.+.+.+=|+|+
T Consensus 73 g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 118 (176)
T 1nya_A 73 GSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQ 118 (176)
T ss_dssp CCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSE
T ss_pred CeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCC
Confidence 889999988777664321100 011244555555555545553
No 36
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=72.44 E-value=23 Score=25.13 Aligned_cols=109 Identities=16% Similarity=0.239 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHH--------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGV-------- 101 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaV-------- 101 (218)
|++.++.....|-..+.+.|..+ .|..++.++|..|-... ...|. ..+...+|..-+..
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 78 (142)
T 2bl0_C 4 QVSEFKEAFELFDSERTGFITKE-----GLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSE 78 (142)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHH-----HHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChH
Confidence 45555666666666666666542 45566667777653100 00111 01222344443332
Q ss_pred HHHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 QIVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 qIvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+.-+...-+.| -|.|+.+|+...+... | ..+|++++...++.+. =++|
T Consensus 79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d-~~dg 129 (142)
T 2bl0_C 79 DILRQAFRTFDPEGTGYIPKAALQDALLNL-G---DRLKPHEFAEFLGITE-TEKG 129 (142)
T ss_dssp HHHHHHHHHTCCSSCSCEEHHHHHHHHHHS-S---SCCCHHHHHHHHHHHC-CSSS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C---CCCCHHHHHHHHHHhC-CCCC
Confidence 2233333334444 4888888888887753 2 2478888887777766 3344
No 37
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=72.26 E-value=21 Score=25.93 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=25.0
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+-|.|+.+|+...+... + ..+|++++...++.+.+=+.|
T Consensus 104 ~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dg 142 (158)
T 2jnf_A 104 GNGYISTDVMREILAEL-D---ETLSSEDLDAMIDEIDADGSG 142 (158)
T ss_dssp SSSSEEHHHHHHHHHHH-C---TTCCHHHHHHHHHHHCSSCCS
T ss_pred CCCeEcHHHHHHHHHHh-C---CcCCHHHHHHHHHHhCCCCCC
Confidence 34778888877777653 2 246777777776666544444
No 38
>2f3o_A PFLD, PFL2, pyruvate formate-lyase 2; glycerol dehydratase, glycyl R hyperthermophilic, unknown function; HET: PGE; 2.90A {Archaeoglobus fulgidus}
Probab=71.80 E-value=33 Score=34.19 Aligned_cols=128 Identities=9% Similarity=0.212 Sum_probs=78.4
Q ss_pred HHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccH---HHHH
Q 027804 48 DFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL---QELC 124 (218)
Q Consensus 48 ~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l---~el~ 124 (218)
..|.+....+ ||.-+.+.++|....+-+|.-.-++||- .+-. =|+..|+++ .+.||.-|++ +.++
T Consensus 215 ~la~e~A~~e--d~~rk~EL~~ia~~~~~v~~~pa~tf~E-AlQ~-~~f~~l~~~--------~E~ng~~~s~GR~Dq~L 282 (776)
T 2f3o_A 215 KLAEELAESE--DGERREELLKIAEICRKVPAEKPETFWE-AVQF-VWLVQSALH--------QENYEQAISMGRIDQYL 282 (776)
T ss_dssp HHHHHHHTTC--CTHHHHHHHHHHHHHHHTTTSCCCSHHH-HHHH-HHHHHHHHH--------HHSCSSCEECCSHHHHS
T ss_pred HHHHHHHhcc--CHHHHHHHHHHHHHhCcCccCCCCCHHH-HHHH-HHHHHHHHh--------hcCCCCcccCccHHHHH
Confidence 3333334333 8999999999999999999987777874 3221 233444433 1247755554 5666
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHhhcc-----c------------cC-CceEEEEECCEEEEEecCCCcchhHH-HHHHH
Q 027804 125 NLLRQRRKSNREAVSEDDCLRAISKLK-----V------------LG-NGYEVISVGKKKLVRSVPTELNKDHN-QILEL 185 (218)
Q Consensus 125 ~~v~k~rg~~~~~IS~dDI~rAi~~L~-----~------------LG-~Gf~vi~ig~k~~vrSvP~ELs~Dq~-~vLe~ 185 (218)
.-+-++ ..+...+|+++...-++.+= + -| +.|..++|||..- =.....+|-+ .+|++
T Consensus 283 ~Pyy~~-Dl~~G~lt~eeA~Eli~~f~ikl~~~~~~r~~~~~~~~~G~~~~~~~~iGG~~~---dG~da~n~ls~l~L~a 358 (776)
T 2f3o_A 283 YPFFKK-DIGEGRINRELAFDILANLWIKTNEIVPAFDSLLEQYFSGQATNQAVTIGGCDI---YGNDATNELTYLMLEV 358 (776)
T ss_dssp HHHHHH-HTTTTSSCHHHHHHHHHHHHHHTTSBCCCCCTTHHHHSTTTCCCCEEEEECBCT---TSCBCCCHHHHHHHHH
T ss_pred HHHHHh-HHhcCCCCHHHHHHHHHHHHHHhhcccccCChhhhhccCCCCcccEEEECCcCC---CCCcCcCHHHHHHHHH
Confidence 554442 23344789988777766542 1 11 4577889988641 1235556665 77888
Q ss_pred Hhhccc
Q 027804 186 AQVTSI 191 (218)
Q Consensus 186 a~~~~~ 191 (218)
+...+.
T Consensus 359 ~~~l~~ 364 (776)
T 2f3o_A 359 TDRLRL 364 (776)
T ss_dssp HHHHCC
T ss_pred HHHcCC
Confidence 887664
No 39
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=71.19 E-value=21 Score=25.93 Aligned_cols=35 Identities=14% Similarity=0.347 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHh-hccccCChhHHHHHHHHHHhcCCCC
Q 027804 39 LATFRSQLEDFARKH-KNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 39 L~~F~~~L~~FA~kH-~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
++.++.....|-.++ .+.|.. ..|..++.++|..|
T Consensus 17 ~~~l~~~F~~~D~~~~~G~i~~-----~e~~~~l~~~~~~~ 52 (161)
T 1dtl_A 17 KNEFKAAFDIFVLGAEDGSIST-----KELGKVMRMLGQNP 52 (161)
T ss_dssp HHHHHHHHHHHTTTCGGGSBCH-----HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHcCCCCCCcCcH-----HHHHHHHHHcCCCC
Confidence 444555666677777 667764 35667788888765
No 40
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=70.83 E-value=9 Score=29.79 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
++..++.....|-.++.+.|..+ .|..++.++|+.|-
T Consensus 50 ~~~~l~~~F~~~D~d~~G~i~~~-----El~~~l~~~g~~~~ 86 (191)
T 3k21_A 50 DVEKLKSTFLVLDEDGKGYITKE-----QLKKGLEKDGLKLP 86 (191)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHCCCCCCCCcHH-----HHHHHHHHcCCCcH
Confidence 45556666666766667777643 56677777887754
No 41
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=70.37 E-value=23 Score=26.46 Aligned_cols=35 Identities=17% Similarity=0.372 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhc-CCCC
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKV-GVDP 78 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~si-GVDP 78 (218)
|++.++.....|- .+.+.|..+ .|+.++.++ |.+|
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~-----el~~~l~~~~g~~~ 37 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSAT-----ELMNILNKVVTRHP 37 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHH-----HHHHHHHHHHHTCS
T ss_pred chhHHHHHHHHHh-CCCCCcCHH-----HHHHHHHHhhhccc
Confidence 4566777777887 777777533 566777776 7665
No 42
>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structu by NIH, protein structure initiative, PSI; 1.95A {Chlorobium tepidum tls} SCOP: a.4.5.60 a.4.5.60
Probab=69.33 E-value=7.6 Score=31.46 Aligned_cols=62 Identities=15% Similarity=0.262 Sum_probs=47.3
Q ss_pred HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc----ccCCceEEEEECCEEEEEecCC
Q 027804 102 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK----VLGNGYEVISVGKKKLVRSVPT 173 (218)
Q Consensus 102 qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~----~LG~Gf~vi~ig~k~~vrSvP~ 173 (218)
.++|..+=.. |-=+++++|...+.. .+++++|..+++.|+ .-|.|++++.++|.+-+++-|.
T Consensus 10 ~~iEAlLf~~---~~pvs~~~La~~~~~-------~~~~~~v~~~l~~L~~~y~~~~rg~~l~~v~~gy~l~t~~~ 75 (162)
T 1t6s_A 10 RSLEALIFSS---EEPVNLQTLSQITAH-------KFTPSELQEAVDELNRDYEATGRTFRIHAIAGGYRFLTEPE 75 (162)
T ss_dssp HHHHHHHHHC---SSCBCHHHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHTCSEEEEEETTEEEEEECGG
T ss_pred HHHHHHHHHc---CCCCCHHHHHHHhCc-------CCCHHHHHHHHHHHHHHhhhCCCCEEEEEECCEEEEEEcHH
Confidence 4566555443 223888988887642 379999999999995 2389999999999999999883
No 43
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=69.26 E-value=6.3 Score=37.72 Aligned_cols=74 Identities=26% Similarity=0.357 Sum_probs=45.7
Q ss_pred HHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCcc----ccc------cCccchHH-HHHHHHHHHhhhcccc
Q 027804 45 QLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFW----AEL------LGIGDFYY-ELGVQIVEICLATRPH 113 (218)
Q Consensus 45 ~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~w----s~~------lG~gdFyy-eLaVqIvEvC~~tr~~ 113 (218)
.|..........++++|.+++-|. ..=| .|+....-+. ++. -|...||. +||.+||+-.+ .
T Consensus 162 ~la~~~~~~~~~l~~~p~~~~~f~---~~~G-~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~----~ 233 (556)
T 2e0w_A 162 ALADDLKTYGSEVLPNHENSKAIF---WKEG-EPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQ----K 233 (556)
T ss_dssp HHHHHHHHTHHHHSTTSHHHHHHH---EETT-EECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHH----H
T ss_pred HHHHHHHHhHHHhhcCchHHHhcc---CCCC-ccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHH----H
Confidence 344444455566778888887773 1113 3443221111 011 15667885 89999999887 4
Q ss_pred CCCcccHHHHHHH
Q 027804 114 NGGLINLQELCNL 126 (218)
Q Consensus 114 NGGli~l~el~~~ 126 (218)
+||+|+++||-..
T Consensus 234 ~GG~lt~~DLa~y 246 (556)
T 2e0w_A 234 NGGLITKEDLAAY 246 (556)
T ss_dssp SSCCCCHHHHHTC
T ss_pred cCCCcCHHHHhhC
Confidence 6999999999643
No 44
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=68.85 E-value=27 Score=31.07 Aligned_cols=42 Identities=7% Similarity=0.246 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
.+++.++.....|=.++.+.|..+ +|...+..++.++|.+|-
T Consensus 332 ~~~~~l~~~F~~~D~d~dG~I~~~-El~~~l~~~~~~~g~~~~ 373 (484)
T 3nyv_A 332 DETKELTAIFHKMDKNGDGQLDRA-ELIEGYKELMRMKGQDAS 373 (484)
T ss_dssp HHHHHHHHHHHHHCTTCSSEEEHH-HHHHHHHHHHC----CGG
T ss_pred HHHHHHHHHHHHhCcCCCceEeHH-HHHHHHHHHhhhcccccc
Confidence 455667777777777777777654 566666777778888765
No 45
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=66.55 E-value=7.3 Score=35.34 Aligned_cols=74 Identities=24% Similarity=0.341 Sum_probs=45.6
Q ss_pred HHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccc----cc------cCccchHH-HHHHHHHHHhhhcccc
Q 027804 45 QLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWA----EL------LGIGDFYY-ELGVQIVEICLATRPH 113 (218)
Q Consensus 45 ~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws----~~------lG~gdFyy-eLaVqIvEvC~~tr~~ 113 (218)
.|..........++++|.+++.|. ..=| .|+....-+.. +. -|...||. +||.+|++-.++
T Consensus 162 ~la~~~~~~~~~l~~~~~~~~~f~---~~~G-~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~---- 233 (366)
T 2dg5_A 162 ALADDLKTYGSEVLPNHENSKAIF---WKEG-EPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQK---- 233 (366)
T ss_dssp HHHHHHHHTGGGTGGGSHHHHHHH---EETT-EECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHhcCchHHHHhc---CCCC-eECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHH----
Confidence 444444555667777888776662 1113 24432211110 11 15667886 899999998874
Q ss_pred CCCcccHHHHHHH
Q 027804 114 NGGLINLQELCNL 126 (218)
Q Consensus 114 NGGli~l~el~~~ 126 (218)
+||+|+++||-..
T Consensus 234 ~GG~lt~~DLa~y 246 (366)
T 2dg5_A 234 NGGLITKEDLAAY 246 (366)
T ss_dssp TTCCCCHHHHHHC
T ss_pred cCCCCCHHHHhhC
Confidence 8999999999754
No 46
>3b09_A Peptidyl-prolyl CIS-trans isomerase; Val-Leu zipper, helices, chaperone; 1.90A {Shewanella}
Probab=66.52 E-value=15 Score=26.65 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=42.2
Q ss_pred chHHHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 94 DFYYELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 94 dFyyeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
.--|.|+.+|.+-.... ...+ ++++.+...+..+.......+|++++.++++.+.
T Consensus 31 K~SYaIG~~mG~~L~~~-g~~~--lD~dav~~Gl~Dal~Gk~~~ls~eei~~~l~~~~ 85 (88)
T 3b09_A 31 HASYGVGRQMGEQLAAN-SFEG--IDIPAVQAGLADAFAGKESAVSMEELQVAFTEIS 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHS-CCTT--CCHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-Cccc--cCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 46788998888865432 1111 7999999999998777767899999999998763
No 47
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=64.79 E-value=22 Score=25.22 Aligned_cols=106 Identities=13% Similarity=0.234 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc----cccCccchHHHHH---------HHHHHHh
Q 027804 42 FRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA----ELLGIGDFYYELG---------VQIVEIC 107 (218)
Q Consensus 42 F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws----~~lG~gdFyyeLa---------VqIvEvC 107 (218)
++.....|-..+.+.|..+ .|..++.++|+.|-... ...+. ..+...+|..-+. ..-+.-+
T Consensus 7 l~~~F~~~D~d~~G~i~~~-----e~~~~l~~~~~~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~ 81 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIE-----ELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPIKTPTEQSKEMLDA 81 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGG-----GHHHHHHHTTCCCCHHHHHHHHHHHTSSEECHHHHHHHHTSCCCCGGGGHHHHHHH
T ss_pred HHHHHHHhCCCCcCccCHH-----HHHHHHHHhCCCCCHHHHHHHHHhcCCCeEcHHHHHHHHHHHhhcCcccHHHHHHH
Confidence 5555566666666667654 45567777787654100 00000 0011122221111 1223333
Q ss_pred hhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 108 LATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 108 ~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
-..-+.| .|.|+.+|+...+... | ..+|++++...++.+..=+.|
T Consensus 82 F~~~D~d~~G~i~~~e~~~~l~~~-g---~~~~~~~~~~~~~~~d~~~dg 127 (145)
T 2bl0_B 82 FRALDKEGNGTIQEAELRQLLLNL-G---DALTSSEVEELMKEVSVSGDG 127 (145)
T ss_dssp HHHHCSSSSSEEEHHHHHHHHHHS-S---SCCCHHHHHHHHTTCCCCTTS
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHc-C---CCCCHHHHHHHHHHcCCCCCC
Confidence 3444444 4899999999888764 2 248888888888777655555
No 48
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=64.20 E-value=14 Score=26.66 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-----CCcccc-----ccCccchHHHHHHH-----
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-----KGFWAE-----LLGIGDFYYELGVQ----- 102 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-----k~~ws~-----~lG~gdFyyeLaVq----- 102 (218)
|+..++.....|-..+.+.|..+. |..++.++|..|-... +.+..+ .+...+|..-+...
T Consensus 8 ~~~~l~~~F~~~D~d~~G~i~~~e-----l~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~ 82 (151)
T 1w7j_B 8 QLEEFKEAFELFDRVGDGKILYSQ-----CGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG 82 (151)
T ss_dssp ---CHHHHHHHHCCSSSSEEESTT-----HHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHH-----HHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence 445556666677777777787664 5577778888765210 011101 11223443322221
Q ss_pred ------HHHHhhhccc-cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 103 ------IVEICLATRP-HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 103 ------IvEvC~~tr~-~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.+ +-..-+ .+-|.|+.+|+...+... | ..+|++++...++.+. =|.|
T Consensus 83 ~~~~~~l~~-~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d-~~dg 137 (151)
T 1w7j_B 83 QGTYEDYLE-GFRVFDKEGNGKVMGAELRHVLTTL-G---EKMTEEEVETVLAGHE-DSNG 137 (151)
T ss_dssp -----CCHH-HHHTTCTTSSSEEEHHHHHHHHHHS-S---SCCCHHHHHHHHTTCC-CTTS
T ss_pred CCcHHHHHH-HHHHhCCCCCCcCcHHHHHHHHHHc-C---CCCCHHHHHHHHHhcc-CCCC
Confidence 112 222333 345889999998888764 2 2588888888877765 3444
No 49
>2dk8_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, RNA_POL_RPC34 domain, RNA polymerase III C39 subunit, NPPSFA; NMR {Mus musculus} SCOP: a.4.5.85
Probab=64.00 E-value=21 Score=25.81 Aligned_cols=63 Identities=22% Similarity=0.324 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCEEEEEecC
Q 027804 97 YELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVP 172 (218)
Q Consensus 97 yeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP 172 (218)
-++.-+|.++|...- +| |+-++|...+. .|+.+|...||+.|=.-| -+++++-+++-+-|-+.
T Consensus 13 ~~ie~~IL~l~~~~P--~G--Itd~~L~~~~p--------~~~~~~r~~aIN~LL~~g-kiel~K~~~~liYr~k~ 75 (81)
T 2dk8_A 13 VEIENRIIELCHQFP--HG--ITDQVIQNEMP--------HIEAQQRAVAINRLLSMG-QLDLLRSNTGLLYRIKD 75 (81)
T ss_dssp HHHHHHHHHHHHHCS--SC--EEHHHHHHHCT--------TSCHHHHHHHHHHHHHHT-SEEEEECSSSEEEEECC
T ss_pred HHHHHHHHHHHHhCC--CC--CCHHHHHHHCC--------CCCHHHHHHHHHHHHHcC-CeEEEecCCeEEEEecc
Confidence 578889999996652 33 56777776653 599999999999997755 48888887765555543
No 50
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=63.52 E-value=6.9 Score=37.28 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCHHHHHHHHhhccccCCceEEEEECCEEEEEecCC
Q 027804 138 VSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPT 173 (218)
Q Consensus 138 IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP~ 173 (218)
-+++|+..|++.|...|+|+.++. +|+ .+-++|-
T Consensus 490 ~~~~dm~~a~~~~~~~~GG~~~v~-~g~-v~~~l~l 523 (608)
T 3nqb_A 490 GNAGDMALAANAVIGTGGGMAVAS-EGK-VTAILPL 523 (608)
T ss_dssp SSHHHHHHHHHHHHHTTSEEEEEE-TTE-EEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEE-CCE-EEEEecc
Confidence 479999999999999999998875 443 3444553
No 51
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=63.36 E-value=8 Score=29.31 Aligned_cols=45 Identities=18% Similarity=0.235 Sum_probs=29.9
Q ss_pred hhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 108 LATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 108 ~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
-..-+.| -|.|+.+|+...+... | ..+|++++...++.+..=|.|
T Consensus 119 F~~~D~d~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dg 164 (195)
T 1qv0_A 119 FDIFDKDGSGTITLDEWKAYGKIS-G---ISPSQEDCEATFRHCDLDNAG 164 (195)
T ss_dssp HHHTC----CEECHHHHHHHHHHH-S---SCCCHHHHHHHHHHSCCCTTS
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 3334444 4899999999888764 3 257888888888777654555
No 52
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=61.58 E-value=9.6 Score=34.30 Aligned_cols=98 Identities=15% Similarity=0.245 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccC-CC
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHN-GG 116 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~N-GG 116 (218)
++..+++....|=.++.+.|..+ .|..++..+|.++.... |. ......++-.....+.| .|
T Consensus 344 ~~~~l~~~F~~~D~d~dG~I~~~-----El~~~l~~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~D~d~~G 405 (494)
T 3lij_A 344 ETKELTDIFRHIDKNGDGQLDRQ-----ELIDGYSKLSGEEVAVF--------DL-----PQIESEVDAILGAADFDRNG 405 (494)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHH-----HHHHTTHHHHSSCCCCC---------------CHHHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHHHhCcCCCCeEcHH-----HHHHHHHHhcccccccc--------cc-----cccHHHHHHHHHHhCCCCCC
Confidence 34445555555555555555432 35555566665544321 11 11122233333333433 58
Q ss_pred cccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 117 LINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 117 li~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.|+.+|....+.+... ..+++++.+|.+.+..=|+|+
T Consensus 406 ~I~~~EF~~~~~~~~~----~~~~~~~~~~F~~~D~d~~G~ 442 (494)
T 3lij_A 406 YIDYSEFVTVAMDRKS----LLSKDKLESAFQKFDQDGNGK 442 (494)
T ss_dssp SEEHHHHHHHHSCHHH----HTCHHHHHHHHHHHCTTCSSE
T ss_pred cCcHHHHHHHHHhhhc----cccHHHHHHHHHHHCCCCCCc
Confidence 9999999887765422 357888888888888777775
No 53
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=61.54 E-value=3.8 Score=31.04 Aligned_cols=94 Identities=13% Similarity=0.182 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc
Q 027804 31 RTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT 110 (218)
Q Consensus 31 ~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t 110 (218)
.+.++..+++.++.....|-.++.+.|..+ .|+.++.++|.++-. +-...++..+
T Consensus 39 ~~~~l~~~~~~l~~~F~~~D~d~dG~I~~~-----El~~~l~~~g~~~~~-----------------~~~~~l~~~~--- 93 (147)
T 1wy9_A 39 NDEDLPSKLEAFKVKYMEFDLNGNGDIDIM-----SLKRMLEKLGVPKTH-----------------LELKRLIREV--- 93 (147)
T ss_dssp TCTTHHHHHHHHHHHHTTSCCCTTSSEEHH-----HHHHHHHHTTCCCCH-----------------HHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHhCCCCCH-----------------HHHHHHHHHh---
Confidence 345567788888888888877777766654 566788888865321 0111222222
Q ss_pred cccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceE
Q 027804 111 RPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYE 158 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~ 158 (218)
-..+.|.|+.+|.+..+.+. .+++.+|.+.+..=|+|..
T Consensus 94 D~d~dg~I~~~eF~~~~~~~---------~~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 94 SSGSEETFSYSDFLRMMLGK---------RSAILRMILMYEEKNKEHK 132 (147)
T ss_dssp CSSCTTEECHHHHHHHHCSS---------GGGGGGGGGGCCCC-----
T ss_pred CCCCCCcEeHHHHHHHHHHh---------HHHHHHHHHHHccCCCCCC
Confidence 22345899999999887652 6678888888888788874
No 54
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=61.23 E-value=4.5 Score=31.41 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=24.0
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhh
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISK 149 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~ 149 (218)
+-|.|+.+|+...+....| ..+|++++...++.
T Consensus 127 ~dG~Is~~El~~~l~~~~g---~~~~~~~~~~~~~~ 159 (202)
T 2bec_A 127 RDGKISRHEMLQVLRLMVG---VQVTEEQLENIADR 159 (202)
T ss_dssp CSSEECHHHHHHHHHHSCC---SCCCHHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHhcC---CCCCHHHHHHHHHH
Confidence 3488888888888876423 24788888777776
No 55
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=60.98 E-value=9 Score=34.85 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=26.6
Q ss_pred CccchHH-HHHHHHHHHhhhccccCCCcccHHHHHHH
Q 027804 91 GIGDFYY-ELGVQIVEICLATRPHNGGLINLQELCNL 126 (218)
Q Consensus 91 G~gdFyy-eLaVqIvEvC~~tr~~NGGli~l~el~~~ 126 (218)
|...||. ++|.+|++-.++ +||+|+++||-..
T Consensus 210 G~~~FY~G~iA~~iv~~~~~----~GG~lt~~DLa~y 242 (376)
T 2v36_A 210 GTDAFYKGKFAKTLSDTVQD----FGGSMTEKDLENY 242 (376)
T ss_dssp CTHHHHSHHHHHHHHHHHHH----TTCCCCHHHHHHC
T ss_pred CcccccCCHHHHHHHHHHHH----cCCCCCHHHHhhC
Confidence 5567886 899999999874 7999999999754
No 56
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=60.29 E-value=10 Score=34.65 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=25.7
Q ss_pred CccchHH-HHHHHHHHHhhhccccCCCcccHHHHHH
Q 027804 91 GIGDFYY-ELGVQIVEICLATRPHNGGLINLQELCN 125 (218)
Q Consensus 91 G~gdFyy-eLaVqIvEvC~~tr~~NGGli~l~el~~ 125 (218)
|...||. ++|.+||+-.+ .+||+|+++||-.
T Consensus 225 G~~~FY~G~iA~~iv~~~~----~~GG~lt~~DLa~ 256 (377)
T 2qmc_A 225 GAKGFYQGQVAELIEKDMK----KNGGIITKEDLAS 256 (377)
T ss_dssp TTHHHHSHHHHHHHHHHHH----HTTCCCCHHHHHT
T ss_pred CcHhhhCCHHHHHHHHHHH----HcCCCCCHHHHhh
Confidence 5567884 89999999887 4799999999964
No 57
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=60.04 E-value=24 Score=26.79 Aligned_cols=38 Identities=11% Similarity=0.288 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCC
Q 027804 36 KEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 36 ~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
..++..++.....|-.++.+.|..+ .|..++.++|+.|
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~-----El~~~l~~~g~~~ 72 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHR-----EIYTVLASVGIKK 72 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHH-----HHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHH-----HHHHHHHHcCCCH
Confidence 3455666667777767777777654 4667777777653
No 58
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=59.49 E-value=36 Score=24.31 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=23.5
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhh
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISK 149 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~ 149 (218)
.+.|.|+.+|+...+....+ ..+|++++...++.
T Consensus 87 d~~G~i~~~e~~~~l~~~~~---~~~~~~~~~~~~~~ 120 (155)
T 3ll8_B 87 DKDGYISNGELFQVLKMMVG---NNLKDTQLQQIVDK 120 (155)
T ss_dssp TCSSCBCHHHHHHHHHHHHG---GGSCHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHHHhc---cCCCHHHHHHHHHH
Confidence 34488999998888776322 24777777777766
No 59
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=56.81 E-value=36 Score=22.62 Aligned_cols=84 Identities=13% Similarity=0.199 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcc
Q 027804 39 LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLI 118 (218)
Q Consensus 39 L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli 118 (218)
.+.++.....|-.++.+.|..+ .|+.++.++|..+-. +-...++.. .-..+.|.|
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~-----------------~~~~~l~~~---~d~~~dg~i 62 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISAS-----ELRHVMINLGEKLTD-----------------EEVEQMIKE---ADLDGDGQV 62 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHTTCCCCH-----------------HHHHHHHHH---HCSSCCSSE
T ss_pred HHHHHHHHHHHCCCCCCeEcHH-----HHHHHHHHhCCCCCH-----------------HHHHHHHHH---hCCCCCCcE
Confidence 3445555666666666666543 566778888864311 011122222 122345899
Q ss_pred cHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q 027804 119 NLQELCNLLRQRRKSNREAVSEDDCLRAIS 148 (218)
Q Consensus 119 ~l~el~~~v~k~rg~~~~~IS~dDI~rAi~ 148 (218)
+..|.+..+.+..+.. ...+.+++.+|-+
T Consensus 63 ~~~eF~~~~~~~~~~~-~~~~~~~l~~aF~ 91 (92)
T 2kn2_A 63 NYEEFVKMMMTVRGGG-GGNGWSRLRRKFS 91 (92)
T ss_dssp EHHHHHHHHHHHTTTC-CCHHHHHHHHHHT
T ss_pred eHHHHHHHHHhccCCC-CCchHHHHHHHhc
Confidence 9999998888765432 2345577877754
No 60
>2z99_A Putative uncharacterized protein; winged helix domain, cell cycle, cell division, chromosome partition, cytoplasm; 2.30A {Mycobacterium tuberculosis}
Probab=56.26 E-value=23 Score=30.04 Aligned_cols=60 Identities=7% Similarity=0.009 Sum_probs=47.2
Q ss_pred HHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc----ccCCceEEEEECCEEEEEecC
Q 027804 101 VQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK----VLGNGYEVISVGKKKLVRSVP 172 (218)
Q Consensus 101 VqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~----~LG~Gf~vi~ig~k~~vrSvP 172 (218)
..+||..+=.. |-=+++++|...+. ++.++|..++..|+ .-|.|++++.++|.+-+++-|
T Consensus 17 ~~~iEAlLf~a---~epvs~~~La~~l~---------~~~~~v~~~l~~L~~~y~~~~rGiel~~v~~gy~l~T~~ 80 (219)
T 2z99_A 17 KRVLEALLLVI---DTPVTADALAAATE---------QPVYRVAAKLQLMADELTGRDSGIDLRHTSEGWRMYTRA 80 (219)
T ss_dssp HHHHHHHHHHC---SSCBCHHHHHHHHT---------SCHHHHHHHHHHHHHHHHHTTCSEEEEEETTEEEEEECG
T ss_pred HHHHHHHHHHc---CCCCCHHHHHHHHC---------cCHHHHHHHHHHHHHHHhhCCCCEEEEEECCEEEEEEcH
Confidence 35677666544 33389999887763 68899999999985 248999999999999999887
No 61
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=55.42 E-value=18 Score=34.49 Aligned_cols=31 Identities=29% Similarity=0.399 Sum_probs=26.0
Q ss_pred CccchHH-HHHHHHHHHhhhccccCCCcccHHHHHH
Q 027804 91 GIGDFYY-ELGVQIVEICLATRPHNGGLINLQELCN 125 (218)
Q Consensus 91 G~gdFyy-eLaVqIvEvC~~tr~~NGGli~l~el~~ 125 (218)
|...||- +||.+|++-.++ +||+|+++||-.
T Consensus 215 G~~~FY~G~iA~~iv~~~~~----~GG~lt~~DLa~ 246 (547)
T 2nlz_A 215 NGESFYRGELADQIHAFFDK----HGGYLTKEDLAC 246 (547)
T ss_dssp TTHHHHHSHHHHHHHHHHHH----TTCCCCHHHHHT
T ss_pred CchhhcCCHHHHHHHHHHHh----cCCCCCHHHHhh
Confidence 4567887 899999999874 799999999964
No 62
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=54.96 E-value=13 Score=27.81 Aligned_cols=42 Identities=19% Similarity=0.264 Sum_probs=28.9
Q ss_pred cccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 111 RPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 111 r~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
-+.| .|.|+.+|+...+... | ..+|++++...++.+..=|.|
T Consensus 118 ~D~d~~G~Is~~El~~~l~~~-g---~~~~~~~~~~~~~~~D~d~dG 160 (191)
T 1uhk_A 118 VDKDQNGAITLDEWKAYTKAA-G---IIQSSEDCEETFRVCDIDESG 160 (191)
T ss_dssp HCTTCSSEECHHHHHHHHHHH-T---SCCSHHHHHHHHHHSCCCTTS
T ss_pred hcCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 3444 4889999998877664 2 247888888877776654554
No 63
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=53.31 E-value=67 Score=28.56 Aligned_cols=106 Identities=14% Similarity=0.177 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCC
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGG 116 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGG 116 (218)
++...++.....|=.++.+.|..+ +|...+.+++..+|.+|-... . .......+...++.+.+- ..+.|
T Consensus 328 ~~~~~l~~~F~~~D~d~dG~I~~~-El~~~l~~~~~~~g~~~~~~~-----~--~~~~~~~~~~~~~~~~~D---~d~dG 396 (486)
T 3mwu_A 328 DETKQLTEIFRKLDTNNDGMLDRD-ELVRGYHEFMRLKGVDSNSLI-----Q--NEGSTIEDQIDSLMPLLD---MDGSG 396 (486)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHH-HHHHHHHHHHHHHTCCGGGHH-----H--HTSSCHHHHHHHHHHHHC---TTCCS
T ss_pred HHHHHHHHHHHHhCCCCCceeeHH-HHHHHHHHhhhhhcccchhcc-----c--ccchhhHHHHHHHHHHhc---CCCCC
Confidence 344666666667666666666554 566667788888888764210 0 001222223333333322 23358
Q ss_pred cccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 117 LINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 117 li~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.|+.+|.+..+.+.. ...+++++.+|.+.+..=|+|+
T Consensus 397 ~I~~~Ef~~~~~~~~----~~~~~~~~~~~F~~~D~d~dG~ 433 (486)
T 3mwu_A 397 SIEYSEFIASAIDRT----ILLSRERMERAFKMFDKDGSGK 433 (486)
T ss_dssp SBCHHHHHHHHSCTT----TTCCHHHHHHHHHHHCSSCSSS
T ss_pred cCcHHHHHHHHHhhh----ccchHHHHHHHHHHhCCCCCCc
Confidence 999999988776532 2468899999999988878885
No 64
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=52.04 E-value=14 Score=28.24 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCC
Q 027804 36 KEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 36 ~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
..++..++.....|-.++.+.|..+ .|+..+.++|++|
T Consensus 33 ~~~~~~l~~~F~~~D~d~~G~i~~~-----e~~~~l~~~~~~~ 70 (204)
T 3e3r_A 33 ASGIQGLARFFRQLDRDGSRSLDAD-----EFRQGLAKLGLVL 70 (204)
T ss_dssp -------CHHHHHHCTTCCSSBCHH-----HHHHHHHTTTCCC
T ss_pred chhHHHHHHHHHHHccCCCCCcCHH-----HHHHHHHHcCCCC
Confidence 4455666777777777777777654 5677788888764
No 65
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=51.75 E-value=28 Score=24.58 Aligned_cols=54 Identities=20% Similarity=0.161 Sum_probs=34.5
Q ss_pred HHHHhhhccccCC--CcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCc
Q 027804 103 IVEICLATRPHNG--GLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 103 IvEvC~~tr~~NG--Gli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.++-..--..+| |.|+.+||...+.+.-|. ....+|+++|.+-++.+..=|+|
T Consensus 12 l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG 68 (93)
T 4eto_A 12 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68 (93)
T ss_dssp HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSS
T ss_pred HHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCC
Confidence 3444444322344 899999999998863321 11247889998888888776666
No 66
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=51.66 E-value=35 Score=24.11 Aligned_cols=40 Identities=23% Similarity=0.350 Sum_probs=30.1
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|.|+.+|+...+... | ..+|++++...++.+.. +.|.
T Consensus 88 d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~-~dg~ 127 (140)
T 1ggw_A 88 DATGMIGVGELRYVLTSL-G---EKLSNEEMDELLKGVPV-KDGM 127 (140)
T ss_dssp SCSSCCCHHHHHHHHHHH-H---SCSCHHHHHHHHHHTTC-SSCC
T ss_pred CCCCcEeHHHHHHHHHHc-C---CCCCHHHHHHHHHhccC-CCCc
Confidence 345889999998888764 2 24788888888888877 7763
No 67
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=51.29 E-value=54 Score=26.03 Aligned_cols=103 Identities=9% Similarity=0.044 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHH--HHHHHHhh
Q 027804 39 LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELG--VQIVEICL 108 (218)
Q Consensus 39 L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLa--VqIvEvC~ 108 (218)
++.++.....|-.++.+.|..+ .|..++.++|.+|-... ...+. ..+...+|..-+. .++.++.
T Consensus 50 ~~~l~~~F~~~D~d~~G~I~~~-----El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~~~l~~~F- 123 (220)
T 3sjs_A 50 YTRIYQWFMGVDRDRSGTLEIN-----ELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAYNLF- 123 (220)
T ss_dssp HHHHHHHHHHHCTTCCSSBCHH-----HHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHH-
Confidence 3344455556666666666553 45566667776543100 00000 0112234432211 1222333
Q ss_pred hcccc-CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 109 ATRPH-NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 109 ~tr~~-NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
..-+. +-|.|+.+|+...+.+.. ..+|++++...++.+.
T Consensus 124 ~~~D~d~~G~I~~~El~~~l~~~g----~~~~~~~~~~l~~~~d 163 (220)
T 3sjs_A 124 VMNARARSGTLEPHEILPALQQLG----FYINQRTSLLLHRLFA 163 (220)
T ss_dssp HHHCCSSTTEECHHHHHHHHHHHT----CCCCHHHHHHHHHHHC
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhC----CCCCHHHHHHHHHHhc
Confidence 33344 458999999988887642 2588888888777776
No 68
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=51.27 E-value=40 Score=20.65 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=29.7
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+-|.|+.+|+...+... + ..++++++...++.+..=++|.
T Consensus 13 d~~G~i~~~el~~~l~~~-~---~~~~~~~~~~~~~~~D~~~dg~ 53 (67)
T 1tiz_A 13 NKDGKLSLDEFREVALAF-S---PYFTQEDIVKFFEEIDVDGNGE 53 (67)
T ss_dssp TSSSCEEHHHHHHHHHHT-C---TTSCHHHHHHHHHHHCCSSSSE
T ss_pred CCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHHCCCCCCc
Confidence 445899999999888764 2 3578888888887776555553
No 69
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=51.22 E-value=39 Score=24.49 Aligned_cols=55 Identities=20% Similarity=0.088 Sum_probs=38.0
Q ss_pred HHHHhhhccccCC--CcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 103 IVEICLATRPHNG--GLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 103 IvEvC~~tr~~NG--Gli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++++-..--..+| |.|+.+||...+.+.-+. ....+|+++|.+-++.+..=|+|.
T Consensus 12 l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~ 69 (101)
T 3nso_A 12 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCE 69 (101)
T ss_dssp HHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSC
T ss_pred HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCC
Confidence 4444444322444 999999999999863221 123689999999999988877774
No 70
>2y8n_A 4-hydroxyphenylacetate decarboxylase large subuni; lyase, radical chemistry, metalloenzyme, iron-sulfur center; 1.75A {Clostridium scatologenes} PDB: 2yaj_A*
Probab=51.05 E-value=32 Score=34.99 Aligned_cols=120 Identities=8% Similarity=0.249 Sum_probs=72.3
Q ss_pred cCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccH---HHHHHHHHhhcCCC
Q 027804 58 RKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL---QELCNLLRQRRKSN 134 (218)
Q Consensus 58 ~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l---~el~~~v~k~rg~~ 134 (218)
..||+-+....+|....+-+|.-.-++||- .+-. -|+..++++ .+.||.-+++ +.++.-+-++ ..+
T Consensus 296 e~d~~rk~EL~~ia~~~~~v~~~pa~tf~E-AlQ~-~~f~~l~~~--------~e~ng~~~s~GRlDq~L~Pyyek-Dl~ 364 (897)
T 2y8n_A 296 ETDSEIKANYEKIEEVMGNIAHKKPANFWE-AIQM-TLCCHFGVV--------NEDPQSGLSIGRLGQVLQPFYEK-DVE 364 (897)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTSCCCSHHH-HHHH-HHHHHHHHH--------TTSCEEEEECBCHHHHSHHHHHH-HHH
T ss_pred ccCHHHHHHHHHHHHHhCccccCCCCCHHH-HHHH-HHHHHHHhh--------hccCCCcccCCcHHHHHHHHHHh-HHh
Confidence 478998899999999999999877777884 3221 233334333 2346644544 5555444332 112
Q ss_pred CCCCCHHHHHHHHhhcc-----c--c----------C-CceEEEEECCEEEEEecCCCcchhHH-HHHHHHhhccc
Q 027804 135 REAVSEDDCLRAISKLK-----V--L----------G-NGYEVISVGKKKLVRSVPTELNKDHN-QILELAQVTSI 191 (218)
Q Consensus 135 ~~~IS~dDI~rAi~~L~-----~--L----------G-~Gf~vi~ig~k~~vrSvP~ELs~Dq~-~vLe~a~~~~~ 191 (218)
...+|+++.+.-++.+- . + | +.|..++|||..- =.....++-+ .+|+++...+.
T Consensus 365 ~G~it~eeA~Ell~~~~iK~~~~~~~~s~~~~~~f~G~~~~~~~~iGG~~~---dG~davn~ls~l~Lea~~~l~~ 437 (897)
T 2y8n_A 365 DGIMTDEEVIELLELYRIKITCIECFASAGVSGGVLSGNTFNNLSLGGQNY---DGLSAVTPLEYLIVEAGMRNQT 437 (897)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHTCCCCCCHHHHTTTSTTCCCCCEEEESBCT---TSSBCCCHHHHHHHHHHHHSCC
T ss_pred cCCCCHHHHHHHHHHHHHHhccccccCChhhhcccCCCCccceEEECCcCC---CCCcCcCHHHHHHHHHHHHcCC
Confidence 23678887776665542 0 1 2 4577889988641 1224555555 77888887653
No 71
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=50.59 E-value=18 Score=27.95 Aligned_cols=21 Identities=10% Similarity=0.305 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHhhccccC
Q 027804 39 LATFRSQLEDFARKHKNDIRK 59 (218)
Q Consensus 39 L~~F~~~L~~FA~kH~~eI~~ 59 (218)
+..++.....|-.++.+.|..
T Consensus 35 ~~~l~~~F~~~D~d~~G~i~~ 55 (208)
T 2hpk_A 35 LSRLYKRFDTFDLDSDGKMEM 55 (208)
T ss_dssp -CHHHHHHHHHCTTCSSEECH
T ss_pred HHHHHHHHHHhCCCCCCCCCH
Confidence 444555555565566666653
No 72
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=50.52 E-value=24 Score=23.65 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=26.9
Q ss_pred ccCCCcccHHHHHHHHHhh----cCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 112 PHNGGLINLQELCNLLRQR----RKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~----rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.+||.|+..|+...+... .| ..+|++++...++.+..=|+|
T Consensus 22 d~~G~~I~~~el~~~l~~~~~~~~g---~~~~~~~~~~~~~~~D~d~dg 67 (93)
T 1k2h_A 22 EGDKYKLSKKELKDLLQTELSSFLD---VQKDADAVDKIMKELDENGDG 67 (93)
T ss_dssp SSCCSSCCHHHHHHHHHHHTHHHHH---CCCCHHHHHHHHHHHHHCTTS
T ss_pred CCCcCccCHHHHHHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCC
Confidence 3444488998888877751 22 246788877777766554444
No 73
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=50.22 E-value=65 Score=23.73 Aligned_cols=14 Identities=21% Similarity=0.325 Sum_probs=13.1
Q ss_pred CCCHHHHHHHHhhc
Q 027804 137 AVSEDDCLRAISKL 150 (218)
Q Consensus 137 ~IS~dDI~rAi~~L 150 (218)
.||++||..|++.+
T Consensus 81 tIt~~DV~~Alr~~ 94 (103)
T 1tzy_D 81 TVTAMDVVYALKRQ 94 (103)
T ss_dssp EECHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHc
Confidence 79999999999987
No 74
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=49.96 E-value=13 Score=26.79 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=33.8
Q ss_pred cccCCCcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++-+||.|+.+||...+.+.-+. ....+|+++|.+-++.+..=|+|.
T Consensus 23 ~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~ 70 (98)
T 3n22_A 23 QEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQ 70 (98)
T ss_dssp TSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSS
T ss_pred cCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCC
Confidence 45566899999999998862221 012578999999988887767663
No 75
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=49.87 E-value=11 Score=27.16 Aligned_cols=90 Identities=16% Similarity=0.294 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc-cccCCCcccHH
Q 027804 43 RSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT-RPHNGGLINLQ 121 (218)
Q Consensus 43 ~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t-r~~NGGli~l~ 121 (218)
+.....|-..+.+.|..+ .|..++.++|+.|-. .++-++.... -..+.|.|+.+
T Consensus 7 ~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~~--------------------~~~~~l~~~~~D~~~~g~i~~~ 61 (148)
T 1m45_A 7 KDIFTLFDKKGQGAIAKD-----SLGDYLRAIGYNPTN--------------------QLVQDIINADSSLRDASSLTLD 61 (148)
T ss_dssp TTCHHHHCTTCCSEEEGG-----GHHHHHHHTTCCCCH--------------------HHHHHHHHC--CC--CCEEEHH
T ss_pred HHHHHHHCCCCCCCCCHH-----HHHHHHHHhCCCCCH--------------------HHHHHHHHHhhCCCCCCeEcHH
Confidence 344455555666666654 356777778876531 0111122221 12235788888
Q ss_pred HHHHHHHhhcCC--CCCCCCHHHHHHHHhhccccCCce
Q 027804 122 ELCNLLRQRRKS--NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 122 el~~~v~k~rg~--~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
|.+..+...... ....-+.+++..|.+.+-+=|+|+
T Consensus 62 eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 99 (148)
T 1m45_A 62 QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGK 99 (148)
T ss_dssp HHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSE
T ss_pred HHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCc
Confidence 888777664100 001235566666666666656664
No 76
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=49.85 E-value=7.5 Score=29.38 Aligned_cols=91 Identities=14% Similarity=0.235 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccC
Q 027804 35 MKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHN 114 (218)
Q Consensus 35 L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~N 114 (218)
+..+.+.++.....|-.++.+-|..+ .|+.++.++|.++-. +-..+++..+- ..+
T Consensus 45 l~~~~~~l~~~F~~~D~d~~G~I~~~-----el~~~l~~~g~~~~~-----------------~e~~~l~~~~D---~d~ 99 (150)
T 2jjz_A 45 LPEKLTAFKEKYMEFDLNNEGEIDLM-----SLKRMMEKLGVPKTH-----------------LEMKKMISEVT---GGV 99 (150)
T ss_dssp HHHHHHHHHHHHTTSCCCTTSSBCHH-----HHHHHHHHTTCCCCH-----------------HHHHHHHHHHH---TTS
T ss_pred HHHHHHHHHHHHHHhCCCCcCcCCHH-----HHHHHHHHcCCCCCH-----------------HHHHHHHHHHC---CCC
Confidence 45666666666666666666666543 456677777754211 11122222221 233
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEE
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEV 159 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~v 159 (218)
.|.|+.+|.+..+.+. .+++.+|.+.+..=|+|.+-
T Consensus 100 dg~I~~~eF~~~~~~~---------~~~i~~aF~~~D~d~~G~~~ 135 (150)
T 2jjz_A 100 SDTISYRDFVNMMLGK---------RSAVLKLVMMFEGKANESSP 135 (150)
T ss_dssp CSSBCHHHHHHHHHSS---------SCCHHHHHHC----------
T ss_pred CCcEeHHHHHHHHHHh---------HHHHHHHHHHHcCCCCCCCC
Confidence 4899999999888762 45799999999888888843
No 77
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=49.53 E-value=44 Score=30.99 Aligned_cols=110 Identities=16% Similarity=0.327 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCC-CCccc-------cccCccchHHHHHH--------
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASN-KGFWA-------ELLGIGDFYYELGV-------- 101 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~-k~~ws-------~~lG~gdFyyeLaV-------- 101 (218)
+++.+++....|-.++.+.|..+ +|+.++.++|.+|-... ...+. ..+...+|..-+..
T Consensus 310 ei~el~~~F~~fD~D~dG~Is~~-----EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~ 384 (450)
T 3sg6_A 310 QIAEFKEAFSLFDKDGDGTITTK-----ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE 384 (450)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchh
Confidence 44566666777766777777654 46667777777643100 00000 01112233222211
Q ss_pred -HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 -QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 -qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
++.++...-=..+-|.|+.+|+...+.... ..++++++...++.+..=+.|
T Consensus 385 e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG----~~ls~eei~~Lf~~~D~D~DG 436 (450)
T 3sg6_A 385 EEIREAFRVFDKDGNGYISAAELRHVMTNLG----EKLTDEEVDEMIREADIDGDG 436 (450)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHT----CCCCHHHHHHHHHHHCTTSSS
T ss_pred hHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCCCCC
Confidence 123333333233457777777777776642 246777776666665443333
No 78
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=49.31 E-value=18 Score=29.51 Aligned_cols=64 Identities=14% Similarity=0.206 Sum_probs=47.1
Q ss_pred HHHHHHhhccccCCceEEEEECC----EEEEEec-CCCcchhHHHHHHHHhhccccccccccCcchhHHHH
Q 027804 142 DCLRAISKLKVLGNGYEVISVGK----KKLVRSV-PTELNKDHNQILELAQVTSILYQCFPFPHISFGLFV 207 (218)
Q Consensus 142 DI~rAi~~L~~LG~Gf~vi~ig~----k~~vrSv-P~ELs~Dq~~vLe~a~~~~~~~~~~~~~~~~~~~~~ 207 (218)
+++++|+.+..+..|=.+++-++ |+.|-.| |..|..-...+|++|.++++ ..+-||-||-|.|-
T Consensus 64 ~l~~ec~~~~~~~~G~a~iT~~~~L~~k~VIH~vgP~~L~~~y~~~L~~a~~~~~--~SIAfP~IstG~~g 132 (183)
T 4abl_A 64 NVERECSQQAQQRKNDYIITGGGFLRCKNIIHVIGGNDVKSSVSSVLQECEKKNY--SSICLPAIGTGNAK 132 (183)
T ss_dssp HHHHHHHHHHHHSCCSEEEEECTTSBSSEEEEEETTSCHHHHHHHHHHHHHHTTC--CEEEECCTTSSTTC
T ss_pred HHHHHHHHhcCCCCCceEEecCCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHcCC--CeEeeccccCCCCC
Confidence 57777777766666766666654 3333332 45688888899999999998 89999999988763
No 79
>3tl8_B Effector protein hopab2; plant immunity, solanum lycopersicum, triggered immunity, bacterial pathogenesis, transferase-LIG complex; HET: TPO; 2.50A {Pseudomonas syringae PV}
Probab=49.25 E-value=45 Score=25.67 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=47.0
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHH---HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCC
Q 027804 15 VARDQYRLLGENVAKLRTDLMKEQ---LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 15 ~~~~~y~~~g~~l~~~~~~~L~~Q---L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLa 80 (218)
.++..+...|...+..-++.|.+| |+..+++|+.++-.++. |. +.+| .-..+.||||-.
T Consensus 27 ~~r~amrNrgnn~ad~AL~~L~qqGvdmerLraAle~~im~~~p-iP--~Di~----raL~~VGI~P~i 88 (117)
T 3tl8_B 27 VDRAAMRNRGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLP-IP--LDIG----SALQNVGINPSI 88 (117)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC-CC--HHHH----HHHHHTTCCCCC
T ss_pred hhHHHHHhccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-CC--HHHH----HHHHhCCCCCCC
Confidence 457778888999888888999888 99999999999876653 33 2344 678899999985
No 80
>2lf3_A Effector protein hopab3; type III effector, structural genomics, PSI-biology, protein structure initiative; NMR {Pseudomonas syringae PV}
Probab=47.95 E-value=52 Score=24.96 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=46.3
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHH---HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCC
Q 027804 15 VARDQYRLLGENVAKLRTDLMKEQ---LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 15 ~~~~~y~~~g~~l~~~~~~~L~~Q---L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLa 80 (218)
.++..+...|...+..-++.|..| |+..+++|+.++-.++. |. +.+| .-..+.||||-.
T Consensus 21 ~~r~amrNrgnn~adaaL~~L~qqGvdmerLraAle~~i~~~~p-iP--~Di~----raL~~VGI~p~i 82 (107)
T 2lf3_A 21 ANRVAMRNRGNNEADAALQALAQNGINMEDLRAALEAYIVWLRP-IP--LDIA----NALEGVGITPRF 82 (107)
T ss_dssp CTHHHHCCSTHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHTCCC-CC--HHHH----HHHHHTTCCCCC
T ss_pred hhHHHHHhccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-CC--HHHH----HHHHcCCCCCCC
Confidence 456777788888888888889888 99999999999886653 32 2344 678899999975
No 81
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=47.46 E-value=40 Score=24.46 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=37.6
Q ss_pred HHHHHhhhccccCC--CcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 102 QIVEICLATRPHNG--GLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 102 qIvEvC~~tr~~NG--Gli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.++++-..--+.+| |.|+.+||...+.+.-+. ....+|+++|.+-++.+..=|+|.
T Consensus 14 ~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~ 72 (104)
T 3zwh_A 14 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNE 72 (104)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSS
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCC
Confidence 34454444322444 899999999999863331 113578999999988887767663
No 82
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=46.21 E-value=28 Score=24.72 Aligned_cols=47 Identities=11% Similarity=-0.033 Sum_probs=32.4
Q ss_pred cccCCCcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++-+||.|+.+||...+...-+. ....+|+++|.+-++.+..=|+|.
T Consensus 22 ~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~ 69 (99)
T 2y5i_A 22 SEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNE 69 (99)
T ss_dssp SSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSS
T ss_pred cCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCc
Confidence 34455799999999998753221 113578999888888776655553
No 83
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=45.80 E-value=13 Score=26.56 Aligned_cols=61 Identities=16% Similarity=0.337 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccH
Q 027804 41 TFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120 (218)
Q Consensus 41 ~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l 120 (218)
.++.....|-.++.+.|.. ..|..++.++|.+|-.. ++-++.. .+.|.|+.
T Consensus 6 ~l~~~F~~~D~d~~G~i~~-----~el~~~l~~~g~~~~~~--------------------~~~~~~~----~~~g~i~~ 56 (140)
T 1ggw_A 6 PYKQAFSLFDRHGTGRIPK-----TSIGDLLRACGQNPTLA--------------------EITEIES----TLPAEVDM 56 (140)
T ss_dssp TTHHHHHHTCSSSSSEECH-----HHHHHHHHHTSCCCCHH--------------------HHHHHHT----TSCSSEEH
T ss_pred HHHHHHHHHCCCCCCcCCH-----HHHHHHHHHcCCCCCHH--------------------HHHHHHh----CCCCcCcH
Confidence 3444555555566666653 35778888888765310 1111111 44577888
Q ss_pred HHHHHHHHhh
Q 027804 121 QELCNLLRQR 130 (218)
Q Consensus 121 ~el~~~v~k~ 130 (218)
+|.+..+...
T Consensus 57 ~eF~~~~~~~ 66 (140)
T 1ggw_A 57 EQFLQVLNRP 66 (140)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHHHHH
Confidence 8887776654
No 84
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3 domains, enzyme DNA binding, biotin coupling domains; 2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A 3rky_A* 3v7c_A* 3v7s_A* 3v8j_A 3v7r_A 3v8k_A* 3v8l_A* 4dq2_A*
Probab=45.17 E-value=42 Score=29.40 Aligned_cols=65 Identities=20% Similarity=0.349 Sum_probs=47.4
Q ss_pred HHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCE-EEEEecCCCcchhH
Q 027804 101 VQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKK-KLVRSVPTELNKDH 179 (218)
Q Consensus 101 VqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k-~~vrSvP~ELs~Dq 179 (218)
.+|++... +..|.-++-+||-+.+. ||..-|-++|+.|+. .||.|..+.++ +.+...|.-|+.+.
T Consensus 6 ~~iL~~L~---~~~g~~~Sg~eLa~~lg---------vSr~aV~k~i~~L~~--~G~~i~~~~~~GY~L~~~~~~l~~~~ 71 (323)
T 3rkx_A 6 QDVLQLLY---KNKPNYISGQSIAESLN---------ISRTAVKKVIDQLKL--EGCKIDSVNHKGHLLQQLPDIWYQGI 71 (323)
T ss_dssp HHHHHHHH---HHTTSCBCHHHHHHHHT---------SCHHHHHHHHHHHHH--TTCEEEEETTTEEEEEECCSSCCHHH
T ss_pred HHHHHHHH---hCCCCccCHHHHHHHHC---------CCHHHHHHHHHHHHh--cCCeEEEeCCCeEEEecCcccCCHHH
Confidence 45666554 23356888888887765 899999999999997 56888877655 44666777777764
No 85
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=44.61 E-value=23 Score=26.40 Aligned_cols=46 Identities=20% Similarity=0.114 Sum_probs=31.5
Q ss_pred ccCCCcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 112 PHNGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+-+||.|+.+||...+...-+. ....+|+++|.+-++.+..=|+|.
T Consensus 35 dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~ 81 (113)
T 2lnk_A 35 EGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE 81 (113)
T ss_dssp TSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSC
T ss_pred CCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCc
Confidence 4445799999999988753221 112478888888888777666653
No 86
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=44.55 E-value=90 Score=22.80 Aligned_cols=84 Identities=17% Similarity=0.199 Sum_probs=56.2
Q ss_pred HHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEEC---CEEEEEecCCC
Q 027804 98 ELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVG---KKKLVRSVPTE 174 (218)
Q Consensus 98 eLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig---~k~~vrSvP~E 174 (218)
+.|.+|+....... .|+.++.+|+-+.+ .|++.-+.+.++.|+..| + |.... |.+.+---|.+
T Consensus 9 ~~al~iL~~la~~~--~~~~~s~~ela~~~---------~i~~~~v~~il~~L~~~G--l-v~~~~g~~ggy~L~~~~~~ 74 (129)
T 2y75_A 9 RYGLTIMIELAKKH--GEGPTSLKSIAQTN---------NLSEHYLEQLVSPLRNAG--L-VKSIRGAYGGYVLGSEPDA 74 (129)
T ss_dssp HHHHHHHHHHHHTT--TSCCBCHHHHHHHT---------TSCHHHHHHHHHHHHHTT--S-EEEC----CCEEESSCGGG
T ss_pred HHHHHHHHHHHhCC--CCCcCCHHHHHHHH---------CcCHHHHHHHHHHHHHCC--c-eEecCCCCCceEeCCCHHH
Confidence 45667776553322 57788999988775 389999999999999865 4 44442 33455445667
Q ss_pred cchhHHHHHHHHhhccccccccc
Q 027804 175 LNKDHNQILELAQVTSILYQCFP 197 (218)
Q Consensus 175 Ls~Dq~~vLe~a~~~~~~~~~~~ 197 (218)
++ =..|+++.+....+..|.+
T Consensus 75 it--l~di~~~~e~~~~~~~c~~ 95 (129)
T 2y75_A 75 IT--AGDIIRVLEGPISPVEVLE 95 (129)
T ss_dssp CB--HHHHHHHHHCCSSCBEECT
T ss_pred Cc--HHHHHHHHcCcCCcccCCC
Confidence 77 3447777776666667764
No 87
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=44.45 E-value=68 Score=22.87 Aligned_cols=77 Identities=19% Similarity=0.231 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---hccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhh
Q 027804 33 DLMKEQLATFRSQLEDFARKH---KNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLA 109 (218)
Q Consensus 33 ~~L~~QL~~F~~~L~~FA~kH---~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~ 109 (218)
.+|++.++.++.....|.++. .+-|..+ .++.+..+.|-+++... .....|+-..+
T Consensus 4 t~le~~i~~l~~~F~~fD~~~g~~~G~Is~~-----EL~~~l~~~~~~~l~~~----------------~~~~ev~~~i~ 62 (100)
T 3nxa_A 4 TELEKAVIVLVENFYKYVSKYSLVKNKISKS-----SFREMLQKELNHMLSDT----------------GNRKAADKLIQ 62 (100)
T ss_dssp CHHHHHHHHHHHHHHHTSCTTCSCTTCBCHH-----HHHHHHHHHSTTTTCSS----------------HHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcCCCCCCeEcHH-----HHHHHHHHHcccccccc----------------ccHHHHHHHHH
Confidence 367888899999999998764 4677654 45566665543433311 11122333333
Q ss_pred ccccC-CCcccHHHHHHHHHhh
Q 027804 110 TRPHN-GGLINLQELCNLLRQR 130 (218)
Q Consensus 110 tr~~N-GGli~l~el~~~v~k~ 130 (218)
..+.| .|.|+.+|-+..+.+.
T Consensus 63 ~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 63 NLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HSCCCSSCCBCHHHHHHHHHHH
T ss_pred HhCCCCCCCCcHHHHHHHHHHH
Confidence 44555 4899999998887763
No 88
>1r9d_A Glycerol dehydratase; radical SAM, lyase; 1.80A {Clostridium butyricum} SCOP: c.7.1.1 PDB: 1r8w_A 1r9e_A
Probab=43.46 E-value=2.6e+02 Score=27.80 Aligned_cols=117 Identities=12% Similarity=0.151 Sum_probs=74.2
Q ss_pred cCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCccc---HHHHHHHHHhhcCCC
Q 027804 58 RKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLIN---LQELCNLLRQRRKSN 134 (218)
Q Consensus 58 ~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~---l~el~~~v~k~rg~~ 134 (218)
..||.-+.+.++|....+-+|.-.-++||- .+- .-|+..|+++ + +.||.-|+ ++.++.-+-++ ..+
T Consensus 233 e~d~~rk~EL~~iA~~~~~vp~~pa~tf~E-AlQ-~~~f~~l~~~-~-------E~ng~~~S~GR~Dq~L~Pyy~~-Dl~ 301 (787)
T 1r9d_A 233 TSDAKRKAELNEIAKICSKVSGEGAKSFYE-ACQ-LFWFIHAIIN-I-------ESNGHSISPARFDQYMYPYYEN-DKN 301 (787)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSCCCSHHH-HHH-HHHHHHHHHH-H-------HCCCSCBCCBSHHHHHHHHHHH-CSS
T ss_pred ccCHHHHHHHHHHHHHhcccccCCCCCHHH-HHH-HHHHHHHHhh-h-------ccCCCcccCccHHHHHHHHHhc-ccc
Confidence 368999999999999999999877777874 322 2333444443 1 24775554 46666665553 222
Q ss_pred CCCCCHHHHHHHHhhcc----ccC--------------CceEEEEECCEEEEEecCCCcchhHH-HHHHHHhhccc
Q 027804 135 REAVSEDDCLRAISKLK----VLG--------------NGYEVISVGKKKLVRSVPTELNKDHN-QILELAQVTSI 191 (218)
Q Consensus 135 ~~~IS~dDI~rAi~~L~----~LG--------------~Gf~vi~ig~k~~vrSvP~ELs~Dq~-~vLe~a~~~~~ 191 (218)
+|+++...-++.+- ... +.|..++|||..- =-....+|-+ .+|+++...+.
T Consensus 302 ---lt~eeA~Eli~~f~iK~~~~~~~r~~~~~~~f~G~~~~~~~~iGG~~~---dG~da~N~ls~l~L~a~~~l~~ 371 (787)
T 1r9d_A 302 ---ITDKFAQELIDCIWIKLNDINKVRDEISTKHFGGYPMYQNLIVGGQNS---EGKDATNKVSYMALEAAVHVKL 371 (787)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTBCCCCCTTHHHHSCSSCCCCEEEECCBCT---TSCBCCCHHHHHHHHHHHHHCC
T ss_pred ---CCHHHHHHHHHHHHHHhhcccccCCcchhhccCCCCCcceEEECCcCC---CCCcCcCHHHHHHHHHHHhcCC
Confidence 89988877776542 111 4577889998631 1124555555 77888887664
No 89
>2lf6_A Effector protein hopab1; type III effector, structural genomics, PSI-biology, protein structure initiative; NMR {Pseudomonas syringae PV}
Probab=41.24 E-value=40 Score=25.37 Aligned_cols=59 Identities=15% Similarity=0.308 Sum_probs=45.5
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHH---HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCC
Q 027804 15 VARDQYRLLGENVAKLRTDLMKEQ---LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 15 ~~~~~y~~~g~~l~~~~~~~L~~Q---L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLa 80 (218)
.++..+...|...+..-++.|..| |+..+++|+.++-.++. |. +.+| .-..+.||||-.
T Consensus 10 ~~r~amrNrg~n~adaaL~~L~qqGvdmerLr~Al~~~i~~~~p-iP--~Di~----raL~~vGI~p~i 71 (101)
T 2lf6_A 10 LASAARHNHSANQTNEALRRLTQEGVDMERLRTSLGRYIMSLEP-LP--PDLR----RALESVGINPFI 71 (101)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHSSSCC-CC--HHHH----HHHHHHTCCSCC
T ss_pred hhHHHHHhccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCC-CC--HHHH----HHHHcCCCCCCC
Confidence 556677778888888888888888 99999999999876553 32 2344 678899999985
No 90
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=41.13 E-value=49 Score=23.34 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=50.5
Q ss_pred chHHHHHHHHHHHhhhccccCCCcc-cHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEE-CCEEEEEec
Q 027804 94 DFYYELGVQIVEICLATRPHNGGLI-NLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISV-GKKKLVRSV 171 (218)
Q Consensus 94 dFyyeLaVqIvEvC~~tr~~NGGli-~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~i-g~k~~vrSv 171 (218)
.-|-.++..|.+--....-..|..+ +..||...+. ||..=|.+|++.|+..| + |... |.-++|...
T Consensus 11 ~~~~~l~~~i~~~I~~~~l~~g~~lps~~eLa~~~~---------vSr~tvr~al~~L~~~G--l-i~~~~g~G~~v~~~ 78 (102)
T 1v4r_A 11 KGYADVATHFRTLIKSGELAPGDTLPSVADIRAQFG---------VAAKTVSRALAVLKSEG--L-VSSRGALGTVVEKN 78 (102)
T ss_dssp CCHHHHHHHHHHHTTTTSCCTTSBCCCHHHHHHHSS---------SCTTHHHHHTTTTTTSS--C-CEEETTTEEESCSC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCC--C-EEEeCCCeEEEccC
Confidence 4566777777766665444567777 8999887754 89999999999999766 4 3344 455666666
Q ss_pred CCCcchh
Q 027804 172 PTELNKD 178 (218)
Q Consensus 172 P~ELs~D 178 (218)
|.+.+.+
T Consensus 79 ~~~~~~~ 85 (102)
T 1v4r_A 79 PIVITGA 85 (102)
T ss_dssp CCCCSSH
T ss_pred CccccHH
Confidence 5555443
No 91
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=40.78 E-value=74 Score=21.02 Aligned_cols=40 Identities=23% Similarity=0.359 Sum_probs=28.1
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.|.|+..|+...+... | ..+|++++...++.+..=++|
T Consensus 32 d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~l~~~~D~~~dg 71 (90)
T 1avs_A 32 DGGGDISTKELGTVMRML-G---QNPTKEELDAIIEEVDEDGSG 71 (90)
T ss_dssp TCSSEECHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCTTCCS
T ss_pred CCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 445888888888887763 2 257888888777776655555
No 92
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=40.17 E-value=39 Score=27.92 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=57.7
Q ss_pred HHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccc------cCCCccc---H
Q 027804 50 ARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRP------HNGGLIN---L 120 (218)
Q Consensus 50 A~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~------~NGGli~---l 120 (218)
..+...|+-+||..-..+...-..-|++. + |.+ ..|.--|.||.++-.-+...|+ .||-|-+ +
T Consensus 17 ~e~kaket~kN~kls~~L~~~i~ea~~~~-----~-~dk--~~g~LLy~latk~k~~~~~~r~~l~~~I~~gklkt~~Qv 88 (187)
T 3tl4_X 17 EDKKVKEIVKNKKVSDSLYKLIKETPSDY-----Q-WNK--STRALVHNLASFVKGTDLPKSELIVNGIINGDLKTSLQV 88 (187)
T ss_dssp CHHHHHHHTTSHHHHHHHHHHHHTSCTTC-----C-CCH--HHHHHHHHHHHHHTTCCCTTHHHHHHHHHTTSCCSHHHH
T ss_pred ChhHHHHHHhCHHHHHHHHHHHHHccccC-----C-CCH--HHHHHHHHHHHhccCccchhHHHHHHHHHhccCCcHHHH
Confidence 34566688899999999988888777642 1 111 2467889999887554444443 4566654 4
Q ss_pred HHHHHHHHhhcCC-----------CCCCCCHHHHHHHHhh
Q 027804 121 QELCNLLRQRRKS-----------NREAVSEDDCLRAISK 149 (218)
Q Consensus 121 ~el~~~v~k~rg~-----------~~~~IS~dDI~rAi~~ 149 (218)
+..+.-+...... -...||+|||.++++.
T Consensus 89 ~AAl~yl~~~~~~id~~~Fe~~cGVGV~VT~EqI~~~V~~ 128 (187)
T 3tl4_X 89 DAAFKYVKANGEASTKMGMNENSGVGIEITEDQVRNYVMQ 128 (187)
T ss_dssp HHHHHHHHHHGGGCCHHHHHHTTTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHCCCCeEeCHHHHHHHHHH
Confidence 4445555443111 1247888888888765
No 93
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=40.00 E-value=49 Score=22.89 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=31.3
Q ss_pred HHHHhhhccccCCCc-ccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccC
Q 027804 103 IVEICLATRPHNGGL-INLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 103 IvEvC~~tr~~NGGl-i~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG 154 (218)
|++......+.+|=+ .+++|+...+. +++++|.++++.+..|.
T Consensus 33 Ia~~iI~~LD~~GYL~~~l~eia~~l~---------~~~~eve~vL~~lQ~~d 76 (76)
T 2k9l_A 33 LALELLNYLNEKGFLSKSVEEISDVLR---------CSVEELEKVRQKVLRLE 76 (76)
T ss_dssp HHHHHHHHCTTSSTTCCCHHHHHHHHT---------SCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHcC---------CCHHHHHHHHHHHhcCC
Confidence 444455556677665 56888887762 89999999999988763
No 94
>3jtn_A YPBH, adapter protein MECA 2; adaptor protein, competence, sporulation, protein binding; 2.09A {Bacillus subtilis} PDB: 3jto_A
Probab=39.68 E-value=96 Score=22.03 Aligned_cols=52 Identities=10% Similarity=0.038 Sum_probs=37.1
Q ss_pred CHHHHHHHHhhcccc-CCceEEEEECCEEEEEecCCCcchhHHHHHHHHhhccc
Q 027804 139 SEDDCLRAISKLKVL-GNGYEVISVGKKKLVRSVPTELNKDHNQILELAQVTSI 191 (218)
Q Consensus 139 S~dDI~rAi~~L~~L-G~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vLe~a~~~~~ 191 (218)
+-|||+++.+.|..+ ...=.+-+.+|++|+.=.+.+.+.+ ..++.++.+-|-
T Consensus 9 ~~edvI~~a~~l~~~~~~~s~LYk~~~~YYL~l~~~~~~~~-~~~~a~l~EYg~ 61 (91)
T 3jtn_A 9 SFEDIIQLSESLQRIGITGGTVYHYDGQYFLSLEDLGSHTA-EGVVAVLAEYGN 61 (91)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEEETTEEEEEECCCTTCCH-HHHHHHHHHHCE
T ss_pred CHHHHHHHHHHccccCCCCceeEEECCEEEEEEeeCCCChH-HHHHHHHHHhCC
Confidence 568999999999765 4455667789999998655555555 666666666443
No 95
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=39.59 E-value=66 Score=19.87 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=30.2
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|.|+.+|+...+... + ..++++++...++.+..=|+|.
T Consensus 18 d~~G~i~~~el~~~l~~~-~---~~~~~~~~~~~~~~~d~~~~g~ 58 (71)
T 2b1u_A 18 DGDGHITVDELRRAMAGL-G---QPLPQEELDAMIREADVDQDGR 58 (71)
T ss_dssp SSSSEEEHHHHHHHGGGT-T---CSSCHHHHHHHHHHCCSSSSSE
T ss_pred CCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCCc
Confidence 345899999999888764 2 3589999888888776555553
No 96
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=39.57 E-value=69 Score=21.92 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=28.8
Q ss_pred CcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCc
Q 027804 116 GLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 116 Gli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
|.|+.+||...+.+.-+. ....+|+++|.+-++.+..=|+|
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG 67 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDG 67 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSS
T ss_pred CeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCC
Confidence 699999999888772211 12357888888888877665555
No 97
>3r07_C Putative lipoate-protein ligase A subunit 2; adenylate-forming enzyme, BI-partite, ATP-binding, transferase; 2.70A {Thermoplasma acidophilum dsm 1728}
Probab=39.47 E-value=28 Score=25.22 Aligned_cols=51 Identities=16% Similarity=0.265 Sum_probs=32.5
Q ss_pred cchHHH--HHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q 027804 93 GDFYYE--LGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAIS 148 (218)
Q Consensus 93 gdFyye--LaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~ 148 (218)
|||+-+ =++.-+|-.+.-...+ ++.+.++.+... +..-.-+|++||..|+.
T Consensus 37 GDFf~~p~~~i~~le~~L~G~~~~----~i~~~l~~~~~~-~~~~~g~~~edi~~ai~ 89 (91)
T 3r07_C 37 GDFFMFPEDSINRLEDMLRGSSIE----KINDIIRDFYNQ-GVITPGVEPEDFIQALR 89 (91)
T ss_dssp EEBCCBSTTHHHHHHHHHTTSBTT----SHHHHHHHHHTT-TCBCTTCCTTHHHHHHC
T ss_pred cccCCCcchhHHHHHHHHCCCCHH----HHHHHHHhhhcc-CceEcCCCHHHHHHHHh
Confidence 788854 3455666666655555 566666655432 23334699999999984
No 98
>2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A*
Probab=38.80 E-value=6.5 Score=37.84 Aligned_cols=65 Identities=11% Similarity=0.152 Sum_probs=0.0
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce-EEEEECCEEEEEecCCCcchhHHHHH
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY-EVISVGKKKLVRSVPTELNKDHNQIL 183 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf-~vi~ig~k~~vrSvP~ELs~Dq~~vL 183 (218)
.+-..|+|++|+..+..... ..+|.++|+..|+.|..|=..| .++.++|..||+ + .=+.|...|.
T Consensus 468 ~kks~l~m~~lv~kI~~S~~---~~ls~~EiEe~L~LL~el~PeWisi~~i~g~~~lk-l--nk~~Dl~~Vr 533 (546)
T 2wvr_C 468 ERKPALSMEVACARMVGSCC---TIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVK-L--DKAADLAHIT 533 (546)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cCCCceEHHHHHHHHHhhcc---ccCCHHHHHHHHHHHHHhChHhheeeeeCCceEEE-e--ecccCHHHHH
Confidence 44578888888888876543 3589999999999998777666 888899999986 3 2234555554
No 99
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=38.58 E-value=25 Score=24.79 Aligned_cols=45 Identities=13% Similarity=0.251 Sum_probs=37.8
Q ss_pred HHHHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccC
Q 027804 101 VQIVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 101 VqIvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG 154 (218)
.+|.+.+....+.+ ||-++..|+...+. ||+.=|.+-++.|+.-|
T Consensus 7 ~~IL~~I~~~i~~~~g~~psv~EIa~~lg---------vS~~TVrr~L~~Le~kG 52 (77)
T 2jt1_A 7 TKIISIVQERQNMDDGAPVKTRDIADAAG---------LSIYQVRLYLEQLHDVG 52 (77)
T ss_dssp HHHHHHHHHHHHHHTTSCEEHHHHHHHHT---------CCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhccCCCcCHHHHHHHHC---------CCHHHHHHHHHHHHHCC
Confidence 46888888776775 99999999998875 78888999999998766
No 100
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=38.35 E-value=1.2e+02 Score=22.51 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=19.2
Q ss_pred HHHHHHHHHHH-HHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 39 LATFRSQLEDF-ARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 39 L~~F~~~L~~F-A~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
...++.....| =..+.+.|.. .+|+.-..+++...|.+|-
T Consensus 11 ~~~l~~~F~~~~D~d~dG~i~~-~E~~~~l~~~~~~~g~~~~ 51 (191)
T 2ccm_A 11 RNKILRVFNTFYDCNHDGVIEW-DDFELAIKKICNLHSWPTD 51 (191)
T ss_dssp HHHHHHHHHHHTCTTCSSEECH-HHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHhccccccCCCCCeeeH-HHHHHHHHHHHHHhCCCCC
Confidence 34445555555 4555555653 2344333333333377654
No 101
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=38.25 E-value=78 Score=25.40 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 027804 29 KLRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60 (218)
Q Consensus 29 ~~~~~~L~~QL~~F~~~L~~FA~kH~~eI~~d 60 (218)
..+...+..+.+.++..|+.|+..|+++....
T Consensus 51 ~~~~~~l~~~i~~l~~~l~~y~e~~r~elf~k 82 (171)
T 2p2u_A 51 SQKSAPLLARRKELEDGVATFATLNKTEMFKD 82 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC
Confidence 34456777888899999999999999887554
No 102
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=37.39 E-value=73 Score=23.05 Aligned_cols=37 Identities=11% Similarity=0.204 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
++..++.....+-..+.+.|.. ..|..++..+|.+|.
T Consensus 25 ~~~~l~~~F~~~D~~~~G~i~~-----~e~~~~l~~~~~~~~ 61 (166)
T 2aao_A 25 EIAGLKEMFNMIDADKSGQITF-----EELKAGLKRVGANLK 61 (166)
T ss_dssp HHHHHHHHHHHHCTTCCSSBCH-----HHHHHHGGGGTCCCC
T ss_pred HHHHHHHHHHHhCCCCCCeEeH-----HHHHHHHHHhCCCCC
Confidence 3444555566666666666664 357778888887653
No 103
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=37.23 E-value=77 Score=19.99 Aligned_cols=41 Identities=27% Similarity=0.391 Sum_probs=28.4
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+-|.|+..|+...+... | ..+|++++...++.+..=++|.
T Consensus 19 d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~~~~g~ 59 (77)
T 2joj_A 19 NKTGSIDYHELKVAMRAL-G---FDVKKPEILELMNEYDREGNGY 59 (77)
T ss_dssp SSSSEEEHHHHHHHHHHH-T---CCCHHHHHHHHHHHHCCSSSSE
T ss_pred CCCCCCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHHCCCCCCc
Confidence 345888999988887764 2 2478888887777766545553
No 104
>1n93_X P40 nucleoprotein; RNA virus nucleoprotein tetramer, viral protein; 1.76A {Borna disease virus} SCOP: a.206.1.1 PDB: 1pp1_X*
Probab=36.12 E-value=39 Score=30.26 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCChh-HHHHHHHHHHhcC
Q 027804 34 LMKEQLATFRSQLEDFARKHKNDIRKNPT-FRSQFHEMCAKVG 75 (218)
Q Consensus 34 ~L~~QL~~F~~~L~~FA~kH~~eI~~dP~-FR~~F~~MC~siG 75 (218)
+++..+....+.|.--|.--.+.|..+.+ +.++|+.|.+|||
T Consensus 137 e~SSI~~HCC~LLIGv~~gSS~kI~t~s~QvqrrFKamMasi~ 179 (375)
T 1n93_X 137 EISSIFSHCCSLLIGVVIGSSSKIKAGAEQIKKRFKTMMAALN 179 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSHHHHSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhhcCCccccccHHHHHHHHHHHHHHcC
Confidence 67888889999999999999999988765 9999999999999
No 105
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=36.12 E-value=67 Score=27.76 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=64.5
Q ss_pred HHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHH-HHhhhccccCCCcccHHHHHHHHHhhcCC-----CCCCCC
Q 027804 66 QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIV-EICLATRPHNGGLINLQELCNLLRQRRKS-----NREAVS 139 (218)
Q Consensus 66 ~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIv-EvC~~tr~~NGGli~l~el~~~v~k~rg~-----~~~~IS 139 (218)
.+++.|..+|+.-+++ ++..-.++.+ ++ ..--..-.+.+.=.+|++.+.+. +. .....|
T Consensus 77 ~l~~~~~~~Gl~~~te-------------~~d~~~~~~l~~~-~d~~kIga~~~~n~~ll~~~a~~-~kPV~lk~G~~~t 141 (280)
T 2qkf_A 77 IFEKVKAEFGIPVITD-------------VHEPHQCQPVAEV-CDVIQLPAFLARQTDLVVAMAKT-GNVVNIKKPQFLS 141 (280)
T ss_dssp HHHHHHHHHCCCEEEE-------------CCSGGGHHHHHHH-CSEEEECGGGTTBHHHHHHHHHT-CCEEEEECCTTSC
T ss_pred HHHHHHHHcCCcEEEe-------------cCCHHHHHHHHhh-CCEEEECcccccCHHHHHHHHcC-CCcEEEECCCCCC
Confidence 5777888888874442 2222222222 33 34444555555566688888643 21 123369
Q ss_pred HHHHHHHHhhccccCCceEEEEECCEEEEEecCCCcchhHHHHHHHHh---hccccccc
Q 027804 140 EDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQ---VTSILYQC 195 (218)
Q Consensus 140 ~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vLe~a~---~~~~~~~~ 195 (218)
.+|++.|++.+..-|+.--++.-.|.+| -+..++.|-..|-.+.+ ..++.|||
T Consensus 142 ~~e~~~A~~~i~~~Gn~~i~L~~rg~~~---~~~~~~~dl~~i~~lk~~~~~~pV~~D~ 197 (280)
T 2qkf_A 142 PSQMKNIVEKFHEAGNGKLILCERGSSF---GYDNLVVDMLGFGVMKQTCGNLPVIFDV 197 (280)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEECCEEC---STTCEECCTTHHHHHHHHTTTCCEEEEH
T ss_pred HHHHHHHHHHHHHcCCCeEEEEECCCCC---CCCccccCHHHHHHHHHhCCCCCEEEEC
Confidence 9999999999999998665665556565 22232334334434433 36777763
No 106
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=36.12 E-value=41 Score=23.48 Aligned_cols=47 Identities=13% Similarity=0.026 Sum_probs=31.7
Q ss_pred cccCCCcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++-+||.|+.+||...+...-+. ....+|+++|.+-++.+..=|+|.
T Consensus 24 ~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~ 71 (95)
T 2wcb_A 24 RKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQ 71 (95)
T ss_dssp SSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSE
T ss_pred cCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCc
Confidence 34556799999999988752110 002478888888888776666663
No 107
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=35.98 E-value=40 Score=23.42 Aligned_cols=35 Identities=9% Similarity=0.113 Sum_probs=25.1
Q ss_pred cchHHHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhc
Q 027804 93 GDFYYELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKL 150 (218)
Q Consensus 93 gdFyyeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L 150 (218)
.+|...|+.+=.++|.... | ..|+.+||..|++.|
T Consensus 36 ~~Fi~~la~eA~~~a~~~~-------------------r----KTI~~~dI~~A~~~l 70 (76)
T 3b0c_W 36 LLFLHRLAEEARTNAFENK-------------------S----KIIKPEHTIAAAKVI 70 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHT-------------------C----SSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC-------------------C----CCCCHHHHHHHHHHH
Confidence 5677777777777765421 1 269999999999876
No 108
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=35.92 E-value=40 Score=23.49 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=26.5
Q ss_pred CCCcccHHHHHHHHHhhcCC-CCCCCCHHHHHHHHhhccccCCce
Q 027804 114 NGGLINLQELCNLLRQRRKS-NREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~-~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+||.|+.+||...+...-+. ....+|+++|.+-++.+..=|+|.
T Consensus 24 d~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~ 68 (95)
T 1j55_A 24 STQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQ 68 (95)
T ss_dssp CTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSS
T ss_pred CCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCc
Confidence 35899999999988763221 112478888888777776655553
No 109
>1b67_A Protein (histone HMFA); DNA binding protein; 1.48A {Methanothermus fervidus} SCOP: a.22.1.2 PDB: 1hta_A 1a7w_A 1b6w_A 1bfm_A
Probab=35.86 E-value=30 Score=23.29 Aligned_cols=15 Identities=20% Similarity=0.202 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHhhcc
Q 027804 137 AVSEDDCLRAISKLK 151 (218)
Q Consensus 137 ~IS~dDI~rAi~~L~ 151 (218)
.|+++||..|++.|+
T Consensus 54 TI~~~Di~~A~~~l~ 68 (68)
T 1b67_A 54 TIKAEDIELARKMFK 68 (68)
T ss_dssp EECHHHHHHHGGGGC
T ss_pred ccCHHHHHHHHHhcC
Confidence 699999999999885
No 110
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=35.74 E-value=38 Score=25.99 Aligned_cols=44 Identities=30% Similarity=0.291 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhc
Q 027804 98 ELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKL 150 (218)
Q Consensus 98 eLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L 150 (218)
+=-.+||+-|.+.|. +|.+|++.+.+.-|.. +.| +|+..||.++
T Consensus 57 e~RerIv~eCnavRq------aLQdLlseym~~~g~k--e~s-e~L~~aI~km 100 (111)
T 4ehp_B 57 DRRERIVAECNAVRQ------ALQDLLSEYMGNAGRK--ERS-DALNSAIDKM 100 (111)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHHHHGGGCCC--CCC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHhcccc--ccc-hhHHHHHHHH
Confidence 345689999999996 6899999999876654 344 7888888765
No 111
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=35.42 E-value=20 Score=29.73 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=47.1
Q ss_pred HHHHHHhhccccCCceEEEEECC---EEEEEec--CCCcchhHHHHHHHHhhccccccccccCcchhHHHHH
Q 027804 142 DCLRAISKLKVLGNGYEVISVGK---KKLVRSV--PTELNKDHNQILELAQVTSILYQCFPFPHISFGLFVF 208 (218)
Q Consensus 142 DI~rAi~~L~~LG~Gf~vi~ig~---k~~vrSv--P~ELs~Dq~~vLe~a~~~~~~~~~~~~~~~~~~~~~~ 208 (218)
+++++|+.+..+..|=.+++-++ -+||--+ |..|..-...+|++|+++++ ..+-||-||-|.+-|
T Consensus 75 ~l~~ec~~~~~~~~G~a~iT~g~~L~~k~VIH~vgp~~L~~~y~~~L~~a~~~~i--~SIAfP~IgtG~~G~ 144 (199)
T 3kh6_A 75 AVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPGGKDVRKTVTSVLEECEQRKY--TSVSLPAIGTGNAGK 144 (199)
T ss_dssp HHHHHHHHHHTSCCCSSEEEECTTSSSSEEEEEETTSCHHHHHHHHHHHHHHTTC--CEEEECCTTSSTTCC
T ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHcCC--CEEeecccccCCCCc
Confidence 67888888765555655565553 2344444 44777788889999999998 899999999887643
No 112
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=35.35 E-value=42 Score=23.07 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=29.7
Q ss_pred cccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++.+||.|+.+|+...+.+.-+.. .+|+++|..-++.+..=|+|.
T Consensus 22 ~d~dG~~I~~~El~~~l~~~~~~~--~~~~~~i~~~~~~~D~d~dG~ 66 (92)
T 2kax_A 22 REGSKLTLSRKELKELIKKELCLG--EMKESSIDDLMKSLDKNSDQE 66 (92)
T ss_dssp TSSCSSEEEHHHHHHHHHHHSCCT--TTCCTTHHHHHHHHTTTCSSE
T ss_pred hCCCCCeeCHHHHHHHHHHHcCCC--CCCHHHHHHHHHHhCCCCCCc
Confidence 344556999999998887642211 267777777777776655553
No 113
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=35.05 E-value=68 Score=20.85 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=31.2
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|.|+.+|+...+.... ..+|++++...++.+..=++|.
T Consensus 35 d~~G~i~~~el~~~l~~~~----~~~~~~~~~~l~~~~d~~~~g~ 75 (87)
T 1s6j_A 35 DNSGTITFDELKDGLKRVG----SELMESEIKDLMDAADIDKSGT 75 (87)
T ss_dssp TCSSCEEHHHHHHHHHTTT----SSCCHHHHHHHHHHHCTTCSSE
T ss_pred CCCCcCcHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCCCCCc
Confidence 4468999999998887642 3589999998888876655553
No 114
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=34.55 E-value=22 Score=27.82 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=40.9
Q ss_pred HHHHHHhhccccCCceEEEEECCE---EEEEecCC---------CcchhHHHHHHHHhhccccccccccCcchhHHHHH
Q 027804 142 DCLRAISKLKVLGNGYEVISVGKK---KLVRSVPT---------ELNKDHNQILELAQVTSILYQCFPFPHISFGLFVF 208 (218)
Q Consensus 142 DI~rAi~~L~~LG~Gf~vi~ig~k---~~vrSvP~---------ELs~Dq~~vLe~a~~~~~~~~~~~~~~~~~~~~~~ 208 (218)
++.++|+.+..+..|=-+++-+++ +||--+|. .|..=-..+|++|.++++ ..+-||.||=|.|-|
T Consensus 44 ~l~~~c~~~g~~~~G~a~it~~~~L~~~~Vih~vgp~~~~~~~~~L~~~~~~~L~~a~~~~~--~sIa~P~igtG~~g~ 120 (159)
T 2dx6_A 44 SIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGDEPASLETVRKATKSALEKAVELGL--KTVAFPLLGTGVGGL 120 (159)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECTTSSSSEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHTTC--SEEEECCTTSSTTCC
T ss_pred HHHHHHHhcCCCCCCcEEEecCCCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHHHHHHcCC--cEEEECCccCCCCCC
Confidence 556666666555555445554443 44444432 233334577888999887 899999999887643
No 115
>2o34_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: MSE; 1.95A {Desulfovibrio vulgaris} SCOP: d.96.2.2
Probab=34.48 E-value=64 Score=27.71 Aligned_cols=52 Identities=21% Similarity=0.352 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc--------cccCC-hhHHHHHHHHHHhcCCCCCCCCCC
Q 027804 33 DLMKEQLATFRSQLEDFARKHKN--------DIRKN-PTFRSQFHEMCAKVGVDPLASNKG 84 (218)
Q Consensus 33 ~~L~~QL~~F~~~L~~FA~kH~~--------eI~~d-P~FR~~F~~MC~siGVDPLas~k~ 84 (218)
+.....+..||..|++++.+|.. ++..+ |+.=++-.+-|...||||.+.-+|
T Consensus 47 ~~~~~~~~~~r~~l~~~i~~~p~f~~sl~p~~~~~~ap~i~~~M~~A~~~~gv~PmaaVaG 107 (250)
T 2o34_A 47 TPMAAYVGELRAQLKVWMEFQPAFRHSLVPVEVPEGAPEVVRRMAHGARLVGVGPFAAVAG 107 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTTTCSSCCCCCTTSCHHHHHHHHHHHHHTCCGGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhChhhhccCCCCCCCCCCCHHHHHHHHHHHHhCCChHHHHHh
Confidence 56677788899999999988876 22344 666444555556699999985433
No 116
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=34.46 E-value=18 Score=23.16 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=22.0
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCC-CHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAV-SEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~I-S~dDI~rAi~~L~~LG~G 156 (218)
.+||.|+..|+...+.+.-+.. + +++++...++.+..=|+|
T Consensus 21 ~~G~~i~~~el~~~l~~~~g~~---~~~~~~~~~~~~~~D~~~dg 62 (78)
T 1cb1_A 21 GDPNQLSKEELKQLIQAEFPSL---LKGPRTLDDLFQELDKNGDG 62 (78)
T ss_dssp SSTTEECHHHHHHHHHHHCSSC---CSSCCCSSHHHHHTCCCSSS
T ss_pred CCcCEeCHHHHHHHHHHHhhhh---cccHHHHHHHHHHhcCCCCC
Confidence 3444888888888876532211 2 455554444444433333
No 117
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=34.40 E-value=1.5e+02 Score=22.43 Aligned_cols=30 Identities=7% Similarity=0.135 Sum_probs=18.5
Q ss_pred HHHHHHHHHHH-hhccccCChhHHHHHHHHHHhcCC
Q 027804 42 FRSQLEDFARK-HKNDIRKNPTFRSQFHEMCAKVGV 76 (218)
Q Consensus 42 F~~~L~~FA~k-H~~eI~~dP~FR~~F~~MC~siGV 76 (218)
+++....|-.. +.+.|.. ..|..++..+|.
T Consensus 24 l~~~f~~~D~~~~~G~i~~-----~e~~~~l~~~~~ 54 (204)
T 1jba_A 24 LQEWYKKFLEECPSGTLFM-----HEFKRFFKVPDN 54 (204)
T ss_dssp HHHHHHHHHSSSTTCCEEH-----HHHHHHHHCCSS
T ss_pred HHHHHHHHHhhCCCCCcCH-----HHHHHHHHHhcC
Confidence 34445556555 5555653 357788888887
No 118
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=34.32 E-value=99 Score=20.32 Aligned_cols=40 Identities=20% Similarity=0.406 Sum_probs=26.7
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+..|+...+... + ..+|++++...++.+.+=++|
T Consensus 21 d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~l~~~~d~~~dg 60 (92)
T 2kn2_A 21 DQNGYISASELRHVMINL-G---EKLTDEEVEQMIKEADLDGDG 60 (92)
T ss_dssp TCSSEECHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCSSCCS
T ss_pred CCCCeEcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 344788888888777663 2 247788877777766554444
No 119
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=34.04 E-value=20 Score=25.67 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=21.5
Q ss_pred ccCChhHHHHHHHHHHhcCCCCCC
Q 027804 57 IRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 57 I~~dP~FR~~F~~MC~siGVDPLa 80 (218)
+|=|++...++.+.|..+|++|-.
T Consensus 6 ~RiD~~lK~~a~~v~~~lGl~~s~ 29 (79)
T 4fxe_A 6 LRIDDELKARSYAALEKMGVTPSE 29 (79)
T ss_dssp EECCHHHHHHHHHHHHHHTCCHHH
T ss_pred EEcCHHHHHHHHHHHHHhCCCHHH
Confidence 678999999999999999999753
No 120
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=33.66 E-value=35 Score=26.91 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHh-cCCCCCCCC-----CCccc------------cccCccchHHH
Q 027804 37 EQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAK-VGVDPLASN-----KGFWA------------ELLGIGDFYYE 98 (218)
Q Consensus 37 ~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~s-iGVDPLas~-----k~~ws------------~~lG~gdFyye 98 (218)
.++..++.....|-.++.+.|..+ .|...+.+ +|.+|.... ..+|. ..+...+|..-
T Consensus 45 ~~~~~l~~~F~~~D~d~dG~I~~~-----El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~ 119 (219)
T 3cs1_A 45 EAKQRRIELFKKFDKNETGKLCYD-----EVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEF 119 (219)
T ss_dssp HHHHHHHHHHHHHCTTCSSCBCHH-----HHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcCcHH-----HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHH
Confidence 356667777777777777777643 46666666 788764311 00111 11223344322
Q ss_pred HH-------HHHHHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 99 LG-------VQIVEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 99 La-------VqIvEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+. .+-+.-+-..-+.| -|.|+.+|+...+.... . ..+|++++...++.+..=|.|.
T Consensus 120 ~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g-~--~~~~~~e~~~l~~~~D~d~dG~ 183 (219)
T 3cs1_A 120 RLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLE-A--WGAKVEDPAALFKELDKNGTGS 183 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHH-H--HTCCCSCHHHHHHHHCTTSSSE
T ss_pred HHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhc-c--cCCCHHHHHHHHHHhCCCCCCc
Confidence 11 01122223333444 37777777777766531 1 0367777766666665545553
No 121
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=33.53 E-value=79 Score=22.65 Aligned_cols=45 Identities=13% Similarity=0.097 Sum_probs=29.7
Q ss_pred ccCCCcccHHHHHHHHHhhcCCCC-CC-CCHHHHHHHHhhccccCCc
Q 027804 112 PHNGGLINLQELCNLLRQRRKSNR-EA-VSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~rg~~~-~~-IS~dDI~rAi~~L~~LG~G 156 (218)
+.+||.|+.+|+...+.+.-+... .. +|+++|..-++.+..=|+|
T Consensus 25 dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG 71 (113)
T 1xk4_C 25 LGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADK 71 (113)
T ss_dssp SSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSS
T ss_pred CCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCC
Confidence 444459999999998874333210 12 6888888887777655555
No 122
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=33.46 E-value=93 Score=19.75 Aligned_cols=39 Identities=31% Similarity=0.526 Sum_probs=26.2
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.|.|+.+|+...+.... .++++++...++.+.+=|+|
T Consensus 15 ~~~G~i~~~el~~~l~~~g-----~~~~~~~~~~~~~~D~~~dg 53 (78)
T 1k9u_A 15 NGDGKISLSELTDALRTLG-----STSADEVQRMMAEIDTDGDG 53 (78)
T ss_dssp TCSSEECHHHHHHHHHHHH-----TCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCcCcHHHHHHHHHHhC-----CCCHHHHHHHHHHhCCCCCC
Confidence 3457888888887777642 36777777777766554444
No 123
>4fmr_A Uncharacterized hypothetical protein; bacterial DNA binding protein, DUF4469 with IG-like fold, ST genomics; HET: MSE; 2.25A {Bacteroides vulgatus}
Probab=32.82 E-value=42 Score=29.12 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=34.8
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc-----ccCCceEE
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK-----VLGNGYEV 159 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~-----~LG~Gf~v 159 (218)
..-|-++++|+++++.+.+. .+++.||..+++.|. -|-.|+.|
T Consensus 28 ~~~gs~t~~dIa~~ia~~~S----~ls~~di~~vl~~l~~~~~e~L~~G~sV 75 (265)
T 4fmr_A 28 ETTRSIDKEIILDRMVAKNP----GVRRETMALGIELMEEVVAEALMNGESV 75 (265)
T ss_dssp CCCCEECHHHHHHHHHHHCT----TSCHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred EEecccCHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 45579999999999987643 589999999998885 56677766
No 124
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=32.44 E-value=1.5e+02 Score=21.83 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=12.9
Q ss_pred CCCHHHHHHHHhhc
Q 027804 137 AVSEDDCLRAISKL 150 (218)
Q Consensus 137 ~IS~dDI~rAi~~L 150 (218)
.||.+||..|++.+
T Consensus 80 TVt~~DV~~ALkr~ 93 (102)
T 1id3_B 80 TVTSLDVVYALKRQ 93 (102)
T ss_dssp EECHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHc
Confidence 79999999999976
No 125
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=32.35 E-value=1.5e+02 Score=21.78 Aligned_cols=91 Identities=15% Similarity=0.266 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc
Q 027804 31 RTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT 110 (218)
Q Consensus 31 ~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t 110 (218)
.+..+-.++..++.....|-.++.+.|..+ .|++++..+|..+- + +....++..+
T Consensus 68 eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~--------------~---~~~~~~~~~~--- 122 (173)
T 1alv_A 68 EFKYLWNNIKKWQAIYKQFDVDRSGTIGSS-----ELPGAFEAAGFHLN--------------E---HLYSMIIRRY--- 122 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSSBCTT-----THHHHHHHHTCCCC--------------H---HHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHcCCCCC--------------H---HHHHHHHHHh---
Confidence 333344444555555556655666666554 24455555554321 1 2223333333
Q ss_pred cccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+.+.|-|+.+|.+..+.+ .+++.+|.+.+.+=|+|+
T Consensus 123 -dd~dg~i~~~eF~~~~~~----------~~~~~~~F~~~D~d~~G~ 158 (173)
T 1alv_A 123 -SDEGGNMDFDNFISCLVR----------LDAMFRAFKSLDKDGTGQ 158 (173)
T ss_dssp -TCSSSCBCHHHHHHHHHH----------HHHHHHHHHHHSSSCCSE
T ss_pred -cCCCCcCcHHHHHHHHHH----------HHHHHHHHHHhCCCCCCe
Confidence 344588999999888876 267888888888878886
No 126
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=32.28 E-value=77 Score=25.11 Aligned_cols=38 Identities=5% Similarity=0.096 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhccccCChhHHHHHHH-HHHhcCCCCCC
Q 027804 38 QLATFRSQLEDFARKHKNDIRKNPTFRSQFHE-MCAKVGVDPLA 80 (218)
Q Consensus 38 QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~-MC~siGVDPLa 80 (218)
|...++.....|-.++.+.|..+ .|.. +...+|.+|..
T Consensus 49 ~~~~l~~~F~~~D~d~dG~Is~~-----El~~~l~~~lg~~~~~ 87 (226)
T 2lvv_A 49 SKSRRIELFKQFDTNGTGKLGFR-----EVLDGCYGILKLDEFT 87 (226)
T ss_dssp HHHHHHHHHHHHGGGSCSCBCSH-----HHHHHHHHTTCCTTTS
T ss_pred HHHHHHHHHHHHCCCCCCcCcHH-----HHHHHHHHHhCCCCCH
Confidence 34556666666666777777655 3455 44456777653
No 127
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=31.89 E-value=1.1e+02 Score=22.81 Aligned_cols=16 Identities=13% Similarity=0.237 Sum_probs=10.5
Q ss_pred CCc-ccHHHHHHHHHhh
Q 027804 115 GGL-INLQELCNLLRQR 130 (218)
Q Consensus 115 GGl-i~l~el~~~v~k~ 130 (218)
.|. |+..|.+..+...
T Consensus 74 ~G~~I~~~EF~~~~~~~ 90 (183)
T 1dgu_A 74 AKDSLSFEDFLDLLSVF 90 (183)
T ss_dssp SSCCCCHHHHHHHHHHH
T ss_pred CCCEecHHHHHHHHHHh
Confidence 366 7777777666543
No 128
>2iie_A Integration HOST factor; DNA kinking, bending, U-turn, intercalation, divalent, metal, recombination/DNA complex; HET: DNA; 2.41A {Escherichia coli} PDB: 2iif_A*
Probab=31.84 E-value=50 Score=27.24 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=33.5
Q ss_pred HhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 106 ICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 106 vC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
||.+....+.|.|+-+||+..+.+..+ +|..|+..+++.|-
T Consensus 35 i~~~L~~~~~~~Mtk~eLi~~ia~~~~-----lsk~da~~vl~~l~ 75 (204)
T 2iie_A 35 MASTLAQGGSGGLTKAEMSEYLFDKLG-----LSKRDAKELVELFF 75 (204)
T ss_dssp HHHHHHTCCSSSBCHHHHHHHHHHHHC-----CCHHHHHHHHHHHH
T ss_pred HHHHHhhcccCCcCHHHHHHHHHHHcC-----CCHHHHHHHHHHHH
Confidence 455555678899999999999998654 89999999988774
No 129
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=31.51 E-value=50 Score=25.23 Aligned_cols=40 Identities=18% Similarity=0.131 Sum_probs=23.4
Q ss_pred hccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q 027804 109 ATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAIS 148 (218)
Q Consensus 109 ~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~ 148 (218)
..-+.| .|.|+.+|+...+..........+|++++..-++
T Consensus 118 ~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~ 158 (207)
T 2ehb_A 118 KLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVD 158 (207)
T ss_dssp HHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHH
Confidence 333444 4889999998877532100113578888766553
No 130
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=31.50 E-value=1.1e+02 Score=19.77 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=29.3
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|.|+..|+...+... | ..+|++++...++.+..=++|.
T Consensus 26 d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~~~~g~ 66 (85)
T 2ktg_A 26 DNDNKLTAEELGTVMRAL-G---ANPTKQKISEIVKDYDKDNSGK 66 (85)
T ss_dssp TCCSEEEHHHHHHHHHTT-S---SCCCHHHHHHHHHHHSSSSCSE
T ss_pred CCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCCc
Confidence 345899999999888764 2 3578888888877776555553
No 131
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=31.46 E-value=1.2e+02 Score=20.32 Aligned_cols=49 Identities=16% Similarity=0.268 Sum_probs=32.4
Q ss_pred HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 102 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 102 qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
++.++...--..+.|.|+.+|+...+... | ++++++...++.+..=|+|
T Consensus 28 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g-----~~~~~~~~~~~~~D~d~dg 76 (91)
T 2pmy_A 28 RLRSVFAACDANRSGRLEREEFRALCTEL-R-----VRPADAEAVFQRLDADRDG 76 (91)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHT-T-----CCHHHHHHHHHHHCTTCSS
T ss_pred HHHHHHHHHCCCCCCCCcHHHHHHHHHHc-C-----cCHHHHHHHHHHhCCCCCC
Confidence 34444443333446899999999888763 2 6888888877777655555
No 132
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=31.37 E-value=1.5e+02 Score=21.41 Aligned_cols=48 Identities=25% Similarity=0.326 Sum_probs=34.2
Q ss_pred HHHhhhccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 104 VEICLATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 104 vEvC~~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+......-+.| -|.|+.+|+...+... | +|++++...++.+.+=|+|.
T Consensus 104 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~-g-----~~~~~~~~~~~~~D~d~dg~ 152 (176)
T 1nya_A 104 VKGIVGMCDKNADGQINADEFAAWLTAL-G-----MSKAEAAEAFNQVDTNGNGE 152 (176)
T ss_dssp HHHHHHHTCSSCCSEEEHHHHHHHHHHT-T-----CCHHHHHHHHHHHCTTCSSE
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHh-C-----CCHHHHHHHHHHhCCCCCCC
Confidence 33334444544 4999999999888764 2 78999998888887656664
No 133
>4dm9_A Ubiquitin carboxyl-terminal hydrolase isozyme L1; ubiquitin hydrolase, ligase, hydrolase, ligase-inhibitor COM; HET: PHQ GME; 2.35A {Homo sapiens} PDB: 3kw5_A 2etl_A* 3irt_A 3kvf_A 3ifw_A 2len_A
Probab=31.23 E-value=23 Score=30.11 Aligned_cols=20 Identities=20% Similarity=0.521 Sum_probs=18.7
Q ss_pred cccCChhHHHHHHHHHHhcCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDP 78 (218)
.|.+||++ |++++..+||.|
T Consensus 10 pLESnP~V---ft~l~~~LGv~~ 29 (228)
T 4dm9_A 10 PMEINPEM---LNKVLSRLGVAG 29 (228)
T ss_dssp CCCCSHHH---HHHHHHHTTBCS
T ss_pred eccCCHHH---HHHHHHHcCCCC
Confidence 57899999 999999999998
No 134
>2xns_C RGS14, regulator of G-protein signaling 14; hydrolase-peptide complex, ADP-ribosylation, arginine finger binding, lipoprotein, nucleotide-binding; HET: GDP SRT; 3.41A {Homo sapiens}
Probab=31.11 E-value=42 Score=21.21 Aligned_cols=28 Identities=29% Similarity=0.493 Sum_probs=17.4
Q ss_pred HHHHHHHhhcCCC----CCCCCHHHHHHHHhh
Q 027804 122 ELCNLLRQRRKSN----REAVSEDDCLRAISK 149 (218)
Q Consensus 122 el~~~v~k~rg~~----~~~IS~dDI~rAi~~ 149 (218)
++.+.++|+-... ...++.+|++||+.-
T Consensus 4 ~~~EllsraQs~radDQRGLL~KEdLv~~l~d 35 (40)
T 2xns_C 4 GLVELLNRVQSSGAHDQRGLLSNEEVFRALRD 35 (40)
T ss_dssp HHHHHHHHHTTCSCCSCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccccccHHHHHHHhHH
Confidence 4444555543322 248999999999753
No 135
>2wdt_A Ubiquitin carboxyl-terminal hydrolase L3; hydrolase-protein binding complex, enzyme-ligand complex, UB isopeptidase, UCH-L superfamily, cystein proteinase, peptid hydrolase; 2.30A {Plasmodium falciparum} PDB: 2we6_A
Probab=30.87 E-value=16 Score=31.10 Aligned_cols=21 Identities=24% Similarity=0.360 Sum_probs=19.3
Q ss_pred cccCChhHHHHHHHHHHhcCCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
.|.+||++ |++++..+||.|+
T Consensus 9 plESnP~V---ft~l~~~lGv~~~ 29 (232)
T 2wdt_A 9 PLESNPDS---LYLYSCKLGQSKL 29 (232)
T ss_dssp CCBCCHHH---HHHHHHHHTCCSE
T ss_pred eecCCHHH---HHHHHHHhCCCCe
Confidence 58899999 9999999999985
No 136
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=30.60 E-value=70 Score=23.24 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc---ccCChhHHHHHHHHHHhcCCCC
Q 027804 32 TDLMKEQLATFRSQLEDFARKHKND---IRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 32 ~~~L~~QL~~F~~~L~~FA~kH~~e---I~~dP~FR~~F~~MC~siGVDP 78 (218)
+++|...++.|+.-+++--.+...+ ..+-.+=..++++|...-||||
T Consensus 26 le~Lee~leKl~~VveERree~~~~~~~~~er~~Kl~~~~e~l~~~GI~~ 75 (86)
T 3nr7_A 26 LETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDP 75 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 5566666666665444333322222 2222233467899999999998
No 137
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=30.53 E-value=1.5e+02 Score=21.42 Aligned_cols=90 Identities=10% Similarity=0.103 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc
Q 027804 31 RTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT 110 (218)
Q Consensus 31 ~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t 110 (218)
++..+-..+...+.....|-.++.+.|..+ .|++++.++|..+ . .+-..+++..+
T Consensus 61 eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~-~----------------~~~~~~~~~~~--- 115 (165)
T 1k94_A 61 AFKELWAALNAWKENFMTVDQDGSGTVEHH-----ELRQAIGLMGYRL-S----------------PQTLTTIVKRY--- 115 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSBCCHH-----HHHHHHHHTTCCC-C----------------HHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceECHH-----HHHHHHHHhCCCC-C----------------HHHHHHHHHHh---
Confidence 333444444555555666655555555543 4556666666432 1 01122333333
Q ss_pred cccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|.|+.+|.+..+.+. +++..+.+.+.+=|+|+
T Consensus 116 --d~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~~G~ 150 (165)
T 1k94_A 116 --SKNGRIFFDDYVACCVKL----------RALTDFFRKRDHLQQGS 150 (165)
T ss_dssp --CBTTBCBHHHHHHHHHHH----------HHHHHHHHTTCTTCCSE
T ss_pred --CCCCeEcHHHHHHHHHHH----------HHHHHHHHHhCCCCCCe
Confidence 356789999998888763 67777777777777776
No 138
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=30.46 E-value=1.3e+02 Score=20.62 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=31.4
Q ss_pred HHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 103 IVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 103 IvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.++...--..+.|.|+..|+...+... | ..+|++++...++.+.+=|+|
T Consensus 34 l~~~F~~~D~d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~l~~~~D~d~dg 83 (107)
T 2d58_A 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKL-G---VPKTHLELKKLIGEVSSGSGE 83 (107)
T ss_dssp HHHHHTTSCCCTTSCEEHHHHHHHHHHT-T---CCCCHHHHHHHHHHHCSSSSS
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 3333333333445888888888877763 2 247888888777776554444
No 139
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=30.39 E-value=73 Score=27.02 Aligned_cols=60 Identities=10% Similarity=0.252 Sum_probs=45.2
Q ss_pred HHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCEEEEEecCCCcchhHHHHHHHHhhccc
Q 027804 121 QELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTELNKDHNQILELAQVTSI 191 (218)
Q Consensus 121 ~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vLe~a~~~~~ 191 (218)
++++..++| ..|.+|++++++.++....|+.+ +..++.-.|.|=..|....++.+...++
T Consensus 126 ~~vl~~m~r-------~~t~e~~~~~i~~l~~~~~gi~i----~~~~IvG~PgEt~ed~~~t~~~l~~l~~ 185 (304)
T 2qgq_A 126 DKILKLMGR-------TKSSEELKKMLSSIRERFPDAVL----RTSIIVGFPGETEEDFEELKQFVEEIQF 185 (304)
T ss_dssp HHHHHHTTC-------CSCHHHHHHHHHHHHHHCTTCEE----EEEEEECCTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhCC-------CCCHHHHHHHHHHHHhhCCCCEE----EEEEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 345555544 36899999999999886667655 3457777899988888999999888664
No 140
>3hdi_A Processing protease; CAGE structure, M16B peptidase, metallopeptidase, peptidasome, protease, hydrolase; 2.70A {Bacillus halodurans c-125}
Probab=30.19 E-value=41 Score=28.89 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=32.0
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCEE
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKK 166 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~ 166 (218)
|...++.+...++.+ ||.+||.++++.+- ...+.++.+|...
T Consensus 364 ~~~~~~~~~~~~i~~--------vt~~dv~~~a~~~~--~~~~~~~vvgp~~ 405 (421)
T 3hdi_A 364 KKHRSLDEMIEQINA--------VQKQDVSRLAKILL--SASPSISLINANG 405 (421)
T ss_dssp SCCCCHHHHHHHHHH--------CCHHHHHHHHHHHT--TSCCEEEEEESSC
T ss_pred CCCCCHHHHHHHHHc--------CCHHHHHHHHHHHc--ccCcEEEEECchh
Confidence 344567777777776 99999999999877 5567787787654
No 141
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=30.18 E-value=1.1e+02 Score=19.73 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=24.4
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+.|.|+.+|+...+... | .+|++++...++.+.+=|+|
T Consensus 24 ~~G~i~~~el~~~l~~~-g----~~~~~~~~~~~~~~D~~~dg 61 (86)
T 2opo_A 24 GDGKISSSELGDALKTL-G----SVTPDEVRRMMAEIDTDGDG 61 (86)
T ss_dssp CSSEEEHHHHHHHHHTT-T----TCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCcCHHHHHHHHHHc-C----CCCHHHHHHHHHHhCCCCCC
Confidence 34777777777777653 2 36777777776666554444
No 142
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=30.16 E-value=1.6e+02 Score=21.49 Aligned_cols=91 Identities=11% Similarity=0.151 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc
Q 027804 31 RTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT 110 (218)
Q Consensus 31 ~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t 110 (218)
++..+-.++..++.....|-.++.+.|..+ .|++++..+|..+- .+.++.....
T Consensus 65 ef~~~~~~~~~~~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~~---------------------~~~~~~~~~~ 118 (172)
T 2znd_A 65 EFTGVWKYITDWQNVFRTYDRDNSGMIDKN-----ELKQALSGFGYRLS---------------------DQFHDILIRK 118 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHTTCCCC---------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCccCHH-----HHHHHHHHcCCCCC---------------------HHHHHHHHHH
Confidence 333444444555555555555555555543 45566666664311 1112222222
Q ss_pred ccc-CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPH-NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~-NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
-+. +.|-|+.+|.+..+.+. +.+.++.+.+..=|.|+
T Consensus 119 ~d~~~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~dG~ 156 (172)
T 2znd_A 119 FDRQGRGQIAFDDFIQGCIVL----------QRLTDIFRRYDTDQDGW 156 (172)
T ss_dssp HCTTCSSSEEHHHHHHHHHHH----------HHHHHHHHHHCTTSSSC
T ss_pred hCCCCCCcCcHHHHHHHHHHH----------HHHHHHHHHhCCCCCCe
Confidence 333 34788888888776652 45555555555545543
No 143
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=29.86 E-value=1e+02 Score=21.90 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=29.1
Q ss_pred CcccHHHHHHHHHhhcCCC-CCCCCHHHHHHHHhhccccCCc
Q 027804 116 GLINLQELCNLLRQRRKSN-REAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 116 Gli~l~el~~~v~k~rg~~-~~~IS~dDI~rAi~~L~~LG~G 156 (218)
|.|+.+||...+.+.-+.. ....++++|.+-++.+..=|+|
T Consensus 29 G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG 70 (100)
T 3nxa_A 29 NKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDG 70 (100)
T ss_dssp TCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSC
T ss_pred CeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCC
Confidence 8999999999888743321 1234578888888887766666
No 144
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A*
Probab=29.44 E-value=26 Score=29.77 Aligned_cols=20 Identities=20% Similarity=0.561 Sum_probs=18.8
Q ss_pred cccCChhHHHHHHHHHHhcCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDP 78 (218)
.|.+||++ |++++..+||.|
T Consensus 8 plESnP~V---ft~l~~~lGv~~ 27 (230)
T 1xd3_A 8 PLEANPEV---TNQFLKQLGLHP 27 (230)
T ss_dssp CCBCCHHH---HHHHHHHTTBCT
T ss_pred cccCCHHH---HHHHHHHcCCCc
Confidence 58899999 999999999998
No 145
>3rii_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; alpha-beta-alpha fold, thiol hydroalse, cysteine protease, deubiquitinating enzyme; 2.00A {Homo sapiens} SCOP: d.3.1.0 PDB: 3ris_A 3sqa_A 3tb3_A 3a7s_A
Probab=29.37 E-value=24 Score=30.10 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=19.2
Q ss_pred cccCChhHHHHHHHHHHhcCCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
.|.+||++ |++++..+||.++
T Consensus 15 pLESnP~V---ft~l~~~LGv~~~ 35 (233)
T 3rii_A 15 LMESDPGV---FTELIKGFGCRGA 35 (233)
T ss_dssp CCCCCHHH---HHHHHHHTTCBSE
T ss_pred eecCCHHH---HHHHHHHhCCCCc
Confidence 68899999 9999999999865
No 146
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=29.33 E-value=75 Score=27.69 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=62.8
Q ss_pred HHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCC-----CCCCCCH
Q 027804 66 QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKS-----NREAVSE 140 (218)
Q Consensus 66 ~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~-----~~~~IS~ 140 (218)
.+++.|..+|+.-++ +.+..-.++.++=-..--..-.+.|.=.+|++.+.+. +. .....|.
T Consensus 80 ~l~~~~~~~Glp~~t-------------e~~d~~~~~~l~~~vd~~kIgA~~~~n~~Ll~~~a~~-~kPV~lk~G~~~t~ 145 (292)
T 1o60_A 80 IFQELKDTFGVKIIT-------------DVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKT-GAVINVKKPQFLSP 145 (292)
T ss_dssp HHHHHHHHHCCEEEE-------------ECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHT-TCEEEEECCTTSCG
T ss_pred HHHHHHHHcCCcEEE-------------ecCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHcC-CCcEEEeCCCCCCH
Confidence 567788888876443 1122222222211123334445555566677777643 21 1223699
Q ss_pred HHHHHHHhhccccCCceEEEEECCEEEEEecCCC--cchhHHHHHHHHh-hccccccc
Q 027804 141 DDCLRAISKLKVLGNGYEVISVGKKKLVRSVPTE--LNKDHNQILELAQ-VTSILYQC 195 (218)
Q Consensus 141 dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP~E--Ls~Dq~~vLe~a~-~~~~~~~~ 195 (218)
+|++.|++.+..-|+.--++.-.|.+| -+.. +|......|.-.. ..++.|||
T Consensus 146 ~ei~~Av~~i~~~Gn~~i~L~~rg~~~---~y~~~~~dl~~i~~lk~~~~~~pV~~D~ 200 (292)
T 1o60_A 146 SQMGNIVEKIEECGNDKIILCDRGTNF---GYDNLIVDMLGFSVMKKASKGSPVIFDV 200 (292)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEECCEEC---STTCEECCTTHHHHHHHHTTSCCEEEEH
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCC---CCCccccCHHHHHHHHhhCCCCCEEEEC
Confidence 999999999999998665665555555 2223 3333333333332 46787765
No 147
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=29.20 E-value=1.4e+02 Score=20.31 Aligned_cols=40 Identities=20% Similarity=0.408 Sum_probs=27.7
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+.+|+...+... + ..++++++...++.+..=+.|
T Consensus 41 d~~G~I~~~El~~~l~~~-g---~~~~~~e~~~l~~~~D~d~dG 80 (94)
T 2kz2_A 41 DGNGYISAAELRHVMTNL-G---EKLTDEEVDEMIREADIDGDG 80 (94)
T ss_dssp TCCSCBCHHHHHHHHHHH-T---CCCCHHHHHHHHHHHCTTCSS
T ss_pred CCcCcCCHHHHHHHHHHh-C---CCCCHHHHHHHHHHhCCCCCC
Confidence 344889999988888764 2 247888888777776554444
No 148
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=29.17 E-value=1.1e+02 Score=23.73 Aligned_cols=30 Identities=10% Similarity=0.128 Sum_probs=16.8
Q ss_pred HHHHHHHHH-hhccccCChhHHHHHHHHHHhcCCCC
Q 027804 44 SQLEDFARK-HKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 44 ~~L~~FA~k-H~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
.....|-.. +.+.|.. ..|+.++..+|.+|
T Consensus 23 ~~f~~fD~~~~~G~is~-----~El~~~l~~~~~~~ 53 (211)
T 2ggz_A 23 VWYRTFMMEYPSGLQTL-----HEFKTLLGLQGLNQ 53 (211)
T ss_dssp -CCCSHHHHCTTSEEEH-----HHHHHHTTCCSCCH
T ss_pred HHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCc
Confidence 334445555 5666654 34667777777665
No 149
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=28.72 E-value=1.1e+02 Score=20.63 Aligned_cols=44 Identities=14% Similarity=0.227 Sum_probs=30.5
Q ss_pred ccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 112 PHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+-|.|+..|+...+.... .....+|++++...++.+..=|+|
T Consensus 52 ~d~~G~i~~~el~~~l~~~~-~~g~~~~~~~~~~~~~~~D~~~dg 95 (109)
T 5pal_A 52 KDQSGFIEEEELKGVLKGFS-AHGRDLNDTETKALLAAGDSDHDG 95 (109)
T ss_dssp TTCSSEECHHHHHTHHHHHC-TTCCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCCcCcHHHHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCC
Confidence 34568999999988887642 112358899888888877655555
No 150
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=28.61 E-value=62 Score=23.61 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhcccc----CChhHHHHHHHHHHhcCCCCC
Q 027804 42 FRSQLEDFARKHKNDIR----KNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 42 F~~~L~~FA~kH~~eI~----~dP~FR~~F~~MC~siGVDPL 79 (218)
|+..|.+|....+.++. =++.=|+...++|..+|+.=-
T Consensus 21 i~~~l~~F~~~~~~~l~FP~sLs~~eR~~IH~lA~~~GL~h~ 62 (86)
T 1msz_A 21 FRAMIVEFMASKKMQLEFPPSLNSHDRLRVHQIAEEHGLRHD 62 (86)
T ss_dssp HHHHHHHHHHHTCSEEEECTTCCSHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCcEEEcCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 56667777766666676 366889999999999998743
No 151
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=28.51 E-value=1.4e+02 Score=22.49 Aligned_cols=32 Identities=9% Similarity=0.238 Sum_probs=19.9
Q ss_pred HHHHHHHHHH-hhccccCChhHHHHHHHHHHhcCCCCC
Q 027804 43 RSQLEDFARK-HKNDIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 43 ~~~L~~FA~k-H~~eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
+.....|-.. +.+.|.. ..|..++.++|.+|.
T Consensus 17 ~~~f~~fd~~~~~G~i~~-----~e~~~~l~~~~~~~~ 49 (198)
T 2r2i_A 17 HQWYKKFMTECPSGQLTL-----YEFKQFFGLKNLSPS 49 (198)
T ss_dssp HHHHHHHHHHCTTSEECH-----HHHHHHHTCCSCCHH
T ss_pred HHHHHHHHHhCCCCcCCH-----HHHHHHHHHhCCCcc
Confidence 3344556666 6666753 357778877887653
No 152
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=28.49 E-value=1.4e+02 Score=20.19 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=29.9
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+.+|+...+.... .....+|++++...++.+..=|.|
T Consensus 54 d~~G~I~~~el~~~l~~~~-~~g~~~~~~~~~~~~~~~D~~~dg 96 (109)
T 1bu3_A 54 DKSGFIEEDELKLFLQVFS-AGARALTDAETKAFLKAGDSDGDG 96 (109)
T ss_dssp TCSSSEEHHHHHTHHHHHS-TTCCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCcCcHHHHHHHHHHHc-ccCCCCCHHHHHHHHHHhCCCCCC
Confidence 3458999999998887752 111358888888888777655555
No 153
>3rk6_A Polyadenylate-binding protein-interacting protein; heat fold, PABP, EIF4A, EIF3, translation regulator; 2.00A {Homo sapiens}
Probab=28.19 E-value=2.6e+02 Score=23.23 Aligned_cols=142 Identities=19% Similarity=0.241 Sum_probs=72.1
Q ss_pred chhhhhccHHHHHHHHHhhHhHH--HHHHHHHHHHHHHH-H------HHHHHHHHHhhccccCChhHHHHHHHHHHhcC-
Q 027804 6 GIGGLQSAAVARDQYRLLGENVA--KLRTDLMKEQLATF-R------SQLEDFARKHKNDIRKNPTFRSQFHEMCAKVG- 75 (218)
Q Consensus 6 Gi~ai~~~~~~~~~y~~~g~~l~--~~~~~~L~~QL~~F-~------~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siG- 75 (218)
|-..++|...-.++-...=..++ .++++.+..|+... . +.|...++-==+.=-.+|.|.....++|..|-
T Consensus 9 ~~~~~~~~~~l~r~v~~iLNkLT~~p~~f~~l~~~i~~~~~~~~~~~~~L~~vi~lIfekAi~ep~fs~~YA~LC~~l~~ 88 (234)
T 3rk6_A 9 GGQQMGRGSTLSEYVQDFLNHLTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSH 88 (234)
T ss_dssp ---------CHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred ccCcccchHHHHHHHHHHHHHccCChhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 33444555444666666667777 67777777765543 1 23433333222222368999999999999763
Q ss_pred ---CCCCCCCCCccccccC-------------ccc-----hHHHHHHHHHHHhhh--ccccCCCcccH-------HHHHH
Q 027804 76 ---VDPLASNKGFWAELLG-------------IGD-----FYYELGVQIVEICLA--TRPHNGGLINL-------QELCN 125 (218)
Q Consensus 76 ---VDPLas~k~~ws~~lG-------------~gd-----FyyeLaVqIvEvC~~--tr~~NGGli~l-------~el~~ 125 (218)
++| ....|..-+|. -+| -......=|.|.... -+..||.+++. .+|+.
T Consensus 89 ~l~~~~--~~~~Fr~lLL~rcQ~eFe~~~~~~~~d~~~k~r~lg~i~FIgELf~~l~~~~~~~~~l~e~I~~~ci~~Ll~ 166 (234)
T 3rk6_A 89 HLTISP--QSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNGQVTRADILQVGLRELLN 166 (234)
T ss_dssp HCCCCC--TTCCHHHHHHHHHHHHHTTHHHHTSSCHHHHHHHHHHHHHHHHHHHHCCEECTTSSEECCHHHHHHHHHHHH
T ss_pred hcCCCC--chhHHHHHHHHHHHHHHHhhHHhhhccHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHH
Confidence 334 12222221111 112 122223334444432 33456677762 23332
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 126 LLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 126 ~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.. .-++|+|+-+|+.|+.-|.-
T Consensus 167 ~l~~-------~p~ee~vE~l~~lL~tvG~~ 190 (234)
T 3rk6_A 167 ALFS-------NPMDDNLICAVKLLKLTGSV 190 (234)
T ss_dssp HHHH-------SCCHHHHHHHHHHHHHHHHH
T ss_pred hccC-------CCChHHHHHHHHHHHHHHHH
Confidence 2222 25899999999999987753
No 154
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A
Probab=27.53 E-value=94 Score=29.39 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=44.1
Q ss_pred HHHHHHhcCCC-CCCCCCCccccccCccchH--HHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHH
Q 027804 67 FHEMCAKVGVD-PLASNKGFWAELLGIGDFY--YELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDC 143 (218)
Q Consensus 67 F~~MC~siGVD-PLas~k~~ws~~lG~gdFy--yeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI 143 (218)
|+.||..+|++ ||. -+||| -+++...-.||.. ||..+..||+..+.-.+ .++++-+
T Consensus 526 ~~~~~~~~~~~~~l~-----------~~d~~~~~~~~~~l~~i~~~-----G~s~~~~ell~~~tG~~-----~~~~~~l 584 (615)
T 1r42_A 526 QEALCQAAKHEGPLH-----------KCDISNSTEAGQKLFNMLRL-----GKSEPWTLALENVVGAK-----NMNVRPL 584 (615)
T ss_dssp HHHHHHTTTCCSCGG-----------GCCCTTCHHHHHHHHHHHTT-----TTSSCHHHHHHHHHSSS-----SCCSHHH
T ss_pred HHHHHHhccccCCcc-----------cccccCCHHHHHHHHHHHhC-----cCCCCHHHHHHHhcCCC-----CCChHHH
Confidence 56677777776 443 35776 7777777788866 99999999998776322 5777777
Q ss_pred HHHHhhc
Q 027804 144 LRAISKL 150 (218)
Q Consensus 144 ~rAi~~L 150 (218)
++=++-|
T Consensus 585 ~~y~~pl 591 (615)
T 1r42_A 585 LNYFEPL 591 (615)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655544
No 155
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=27.30 E-value=1.3e+02 Score=25.55 Aligned_cols=48 Identities=17% Similarity=0.373 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCh
Q 027804 14 AVARDQYRLLGEN-------VAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKNP 61 (218)
Q Consensus 14 ~~~~~~y~~~g~~-------l~~~~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP 61 (218)
.+.+++|..+-.. |.+.+...|..||..|+.+|..|..+...-+..-.
T Consensus 149 ~~ak~kf~kLR~DV~~KleLLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~~~ 203 (224)
T 1i4d_A 149 QAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTL 203 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3667788766655 45778889999999999999999998887766554
No 156
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=27.09 E-value=35 Score=25.50 Aligned_cols=20 Identities=5% Similarity=0.046 Sum_probs=18.2
Q ss_pred CChhHHHHHHHHHHhcCCCC
Q 027804 59 KNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 59 ~dP~FR~~F~~MC~siGVDP 78 (218)
-+|+...+|.+.|.+.|+|+
T Consensus 118 l~~e~~~~f~~~~~~~G~~~ 137 (151)
T 1e5p_A 118 LTPEENEILVQFAHEKKIPV 137 (151)
T ss_dssp CCHHHHHHHHHHHHHTTCCG
T ss_pred CCHHHHHHHHHHHHHcCCCH
Confidence 47899999999999999995
No 157
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=26.89 E-value=40 Score=26.13 Aligned_cols=35 Identities=9% Similarity=0.223 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCC
Q 027804 39 LATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 39 L~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
++.++.....|-..+.+.|..+ .|+..+.++|.++
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~-----El~~~l~~~g~~~ 90 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQ-----EILDGLKKIGYQK 90 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHH-----HHHHHHHHHC---
T ss_pred HHHHHHHHHHHCCCCCCcCCHH-----HHHHHHHHhCCCC
Confidence 3444445555555555666533 4566666677653
No 158
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=26.81 E-value=1.8e+02 Score=21.28 Aligned_cols=14 Identities=21% Similarity=0.306 Sum_probs=13.1
Q ss_pred CCCHHHHHHHHhhc
Q 027804 137 AVSEDDCLRAISKL 150 (218)
Q Consensus 137 ~IS~dDI~rAi~~L 150 (218)
.||++||..|++.+
T Consensus 81 tvt~~DV~~Alr~~ 94 (103)
T 2yfw_B 81 TVTSLDVVYALKRQ 94 (103)
T ss_dssp EECHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHc
Confidence 79999999999987
No 159
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=26.72 E-value=96 Score=21.06 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=28.9
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+.+|+...+.... .....+|++++...++.+.+=|+|
T Consensus 54 d~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~~~~D~~~dg 96 (109)
T 3fs7_A 54 DKSGFIEEEELQLFLKNFS-SSARVLTSAETKAFLAAGDTDGDG 96 (109)
T ss_dssp TCSSSBCHHHHHTTGGGTC-TTSCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCeEeHHHHHHHHHHHh-cccccCCHHHHHHHHHHhCCCCCC
Confidence 3458899999887776642 112358888888887777655555
No 160
>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens}
Probab=26.43 E-value=82 Score=23.52 Aligned_cols=93 Identities=20% Similarity=0.326 Sum_probs=56.7
Q ss_pred cccCChhHHHHHHHHHHhcCCC--CCCCCCCccccccCcc---------chHHHHHHHHHHHhhhccccCCC-cccHHHH
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVD--PLASNKGFWAELLGIG---------DFYYELGVQIVEICLATRPHNGG-LINLQEL 123 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVD--PLas~k~~ws~~lG~g---------dFyyeLaVqIvEvC~~tr~~NGG-li~l~el 123 (218)
+.+..|-=..+|...|..+|-| .|+ ..||+. ++-..+..|+.++...=+..+|| --++..|
T Consensus 5 ~~~~~~lt~~~l~~ia~~lg~dWk~LA-------r~Lg~s~~~I~~I~~~~~~~l~eq~~~mL~~W~~~~g~~~Atv~~L 77 (118)
T 2of5_H 5 DAETGFLTQSNLLSVAGRLGLDWPAVA-------LHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLL 77 (118)
T ss_dssp CTTTCCCCHHHHHHHHHTCCTTHHHHH-------HHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTSSCSSHHHHH
T ss_pred CCCcCCCCHHHHHHHHHHHhhHHHHHH-------HHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhccCCCCcHHHHH
Confidence 3444554456789999999976 332 125543 23345677888888888888987 7888999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEEEECCEEEEEecC
Q 027804 124 CNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVISVGKKKLVRSVP 172 (218)
Q Consensus 124 ~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi~ig~k~~vrSvP 172 (218)
++.+.+ +-..||..-+... +..+.++|..+++
T Consensus 78 ~~aL~~--------~~r~diae~l~~~---------ie~~~~~y~~~~~ 109 (118)
T 2of5_H 78 VQALEQ--------SDRQDVAEEVRAV---------LELGRRKYQDSAA 109 (118)
T ss_dssp HHHHHH--------TTCHHHHHHHHHH---------TCCC---------
T ss_pred HHHHHH--------cCcHHHHHHHHHH---------HhhhhHHHHHHHH
Confidence 999887 5667777766653 2234566655554
No 161
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=25.97 E-value=2e+02 Score=21.21 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=16.4
Q ss_pred HHHHHHHHh-hccccCChhHHHHHHHHHHhcCCC
Q 027804 45 QLEDFARKH-KNDIRKNPTFRSQFHEMCAKVGVD 77 (218)
Q Consensus 45 ~L~~FA~kH-~~eI~~dP~FR~~F~~MC~siGVD 77 (218)
....|-..| .+.|.. ..|..++.++|..
T Consensus 30 ~f~~~D~~~~~G~i~~-----~e~~~~l~~~~~~ 58 (190)
T 2l2e_A 30 WYKGFFKDCPSGHLNK-----SEFQKIYKQFFPF 58 (190)
T ss_dssp HHHHHHHHSCCCEECH-----HHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCCcCCH-----HHHHHHHHHhCCC
Confidence 345555663 555653 3566777777654
No 162
>4g92_C HAPE; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Aspergillus nidulans} PDB: 4g91_C*
Probab=25.76 E-value=2.1e+02 Score=21.49 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.1
Q ss_pred CCCHHHHHHHHhhccccC
Q 027804 137 AVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 137 ~IS~dDI~rAi~~L~~LG 154 (218)
.|+++||..||..-..|+
T Consensus 94 tI~~~di~~Av~~~e~~d 111 (119)
T 4g92_C 94 TLQRSDIAAALSKSDMFD 111 (119)
T ss_dssp EECHHHHHHHHTTCGGGG
T ss_pred ccCHHHHHHHHhcCchhh
Confidence 699999999998876553
No 163
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=25.57 E-value=1.4e+02 Score=19.30 Aligned_cols=40 Identities=5% Similarity=0.114 Sum_probs=26.5
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHH---HHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDD---CLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dD---I~rAi~~L~~LG~G 156 (218)
.+.|.|+..|+...+... | ..+|+++ +...++.+..=|+|
T Consensus 26 d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~~~~d~~~~g 68 (86)
T 1j7q_A 26 NAENIAPVSDTMDMLTKL-G---QTYTKRETEAIMKEARGPKGDKKN 68 (86)
T ss_dssp TTTSCBCHHHHHHHHHHT-S---CCCSHHHHHHHHHHHHCSSCSSCC
T ss_pred CCCCcCcHHHHHHHHHHH-c---CCCCHHHHHHHHHHHHHhCCCCCC
Confidence 445899999998888764 2 2578888 66666655433333
No 164
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=25.51 E-value=55 Score=23.72 Aligned_cols=41 Identities=12% Similarity=0.091 Sum_probs=24.9
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
+||.|+.+||...+...-|.. ..++++|.+-++.+..=|+|
T Consensus 37 ~~G~Is~~EL~~~l~~~lg~~--~~~~~ev~~li~~~D~d~dG 77 (106)
T 2h2k_A 37 RKDSLSVNEFKELVTQQLPHL--LKDVGSLDEKMKSLDVNQDS 77 (106)
T ss_dssp STTEECHHHHHHHHHHHCTTT--TTTCCCHHHHHHHHCTTCSS
T ss_pred CCCEECHHHHHHHHHHHcCcC--CCCHHHHHHHHHHHCCCCCC
Confidence 458999999998886533321 11335566666655554555
No 165
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=25.48 E-value=2e+02 Score=21.16 Aligned_cols=29 Identities=10% Similarity=0.151 Sum_probs=17.8
Q ss_pred HHHHHHHH-hhccccCChhHHHHHHHHHHhcCCCC
Q 027804 45 QLEDFARK-HKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 45 ~L~~FA~k-H~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
....|-+. +.+.|. +.+|..++..+|..|
T Consensus 30 ~f~~fd~~~~~G~i~-----~~e~~~~l~~~~~~~ 59 (193)
T 1bjf_A 30 WYKGFLRDCPSGHLS-----MEEFKKIYGNFFPYG 59 (193)
T ss_dssp HHHHHHHHSTTSEEE-----HHHHHHHHTTTSSSS
T ss_pred HHHHHHHHCCCCCcC-----HHHHHHHHHHhcCcC
Confidence 34445555 566665 346778888887654
No 166
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=25.42 E-value=94 Score=19.41 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=23.1
Q ss_pred CcccHHHHHHHHHhhcCCCCCCC--CHHHHHHHHhhccccCCc
Q 027804 116 GLINLQELCNLLRQRRKSNREAV--SEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 116 Gli~l~el~~~v~k~rg~~~~~I--S~dDI~rAi~~L~~LG~G 156 (218)
|.|+..|+...+... + ..+ |++++...++.+..=|+|
T Consensus 22 G~i~~~el~~~l~~~-g---~~~~~~~~~~~~l~~~~D~~~~g 60 (76)
T 1qx2_A 22 NQISKEELKLVMQTL-G---PSLLKGMSTLDEMIEEVDKNGDG 60 (76)
T ss_dssp TSEEHHHHHHHHHHH-G---GGSCTTSCSHHHHHHHHCTTCSS
T ss_pred CeECHHHHHHHHHHh-C---CCcCCCHHHHHHHHHHhCCCCCC
Confidence 788888888777664 2 135 666666666665544444
No 167
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=25.41 E-value=70 Score=22.65 Aligned_cols=40 Identities=28% Similarity=0.343 Sum_probs=29.6
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+.+|+...+... | ..+|+++|.+-++.+..=|+|
T Consensus 48 d~~G~I~~~El~~~l~~l-g---~~~~~~ei~~l~~~~D~d~dG 87 (100)
T 2lv7_A 48 DGNGFISKQELGTAMRSL-G---YMPNEVELEVIIQRLDMDGDG 87 (100)
T ss_dssp SCSSCBCHHHHHHHHHHH-T---CCCCTTTHHHHHHHHCSSCSS
T ss_pred CCCCcCCHHHHHHHHHHh-C---CCCCHHHHHHHHHHHCCCCCC
Confidence 345899999999888764 3 257888888888777665555
No 168
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=25.35 E-value=64 Score=31.22 Aligned_cols=40 Identities=13% Similarity=0.326 Sum_probs=29.6
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+.|.|+.+|.+..+.+.... .-+++++..|.+.+ .=|+|+
T Consensus 774 ~dG~I~~~EF~~~~~~~~~~---~~~~~~l~~aF~~~-~d~~G~ 813 (863)
T 1sjj_A 774 RMGVVTFQAFIDFMSRETAD---TDTADQVMASFKIL-AGDKNY 813 (863)
T ss_dssp SCSEEETTHHHHTHHHHSTT---CSSSHHHHHHHHGG-GTSSSE
T ss_pred CCCcCcHHHHHHHHHHHhcC---CCCHHHHHHHHHHH-hCCCCc
Confidence 35899999998887764322 34678899999988 667775
No 169
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=25.21 E-value=54 Score=20.07 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=19.1
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.|.|+.+|+...+.... ..++++++...++.+.+=|+|
T Consensus 14 ~G~i~~~e~~~~l~~~~----~~~~~~~~~~~~~~~D~~~~g 51 (66)
T 3li6_A 14 DGAVSYEEVKAFVSKKR----AIKNEQLLQLIFKSIDADGNG 51 (66)
T ss_dssp SSSCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHCTTCSS
T ss_pred CCcccHHHHHHHHHHcc----CCCcHHHHHHHHHHHCCCCCC
Confidence 46666666665555431 124555555555554443333
No 170
>3sgr_A Tandem repeat of amyloid-related segment of alpha crystallin residues 90-100 mutant...; amyloid oligomer, beta cylindrin, protein fibril; 2.17A {Homo sapiens}
Probab=24.53 E-value=33 Score=19.36 Aligned_cols=16 Identities=69% Similarity=0.877 Sum_probs=12.2
Q ss_pred hccccCCceEEEEECCEEE
Q 027804 149 KLKVLGNGYEVISVGKKKL 167 (218)
Q Consensus 149 ~L~~LG~Gf~vi~ig~k~~ 167 (218)
+|++||. ||++|||--
T Consensus 2 klkvlgd---vievggklk 17 (25)
T 3sgr_A 2 KLKVLGD---VIEVGGKLK 17 (26)
T ss_dssp CEEEEEE---EEEETTEEE
T ss_pred ceEEeee---eeeeCcEEE
Confidence 5788885 888898753
No 171
>1ais_B TFB TFIIB, protein (transcription initiation factor IIB); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: a.74.1.2 a.74.1.2 PDB: 1d3u_B*
Probab=24.47 E-value=2.5e+02 Score=21.87 Aligned_cols=65 Identities=9% Similarity=0.184 Sum_probs=42.7
Q ss_pred HHHHHHHHhhccccCChhHHHHHHHHHHhcCCC-CC--CCCCC---ccccccCccchHHHHHHHHHHHhhhccc
Q 027804 45 QLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVD-PL--ASNKG---FWAELLGIGDFYYELGVQIVEICLATRP 112 (218)
Q Consensus 45 ~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVD-PL--as~k~---~ws~~lG~gdFyyeLaVqIvEvC~~tr~ 112 (218)
.+.+++..-+ -+..++.+.|+.++..+|++ |. ..-.. -..+.||+++--.+.|..|++-+..+.-
T Consensus 71 ~l~di~~~~~---v~~~~i~~~~~~l~~~L~~~~~~~~~~p~~~i~r~~~~L~l~~~v~~~A~~i~~~~~~~~~ 141 (200)
T 1ais_B 71 TLDEIADIAR---VDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILDEAYKRGL 141 (200)
T ss_dssp CHHHHHHHTT---SCHHHHHHHHHHHHHHTTCCTTTTCCCGGGGHHHHHHHHTCCHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHC---CCHHHHHHHHHHHHHHhcccCCcCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCc
Confidence 4555554433 23467888999999999987 22 21111 1344578887788899999988887543
No 172
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=24.45 E-value=1.2e+02 Score=20.59 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=27.0
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.|.|+.+|+...+..... ....+|++++...++.+.+=|+|
T Consensus 54 d~~G~I~~~el~~~l~~~~~-~g~~~~~~~~~~~~~~~d~~~dg 96 (110)
T 1pva_A 54 DASGFIEEEELKFVLKSFAA-DGRDLTDAETKAFLKAADKDGDG 96 (110)
T ss_dssp TCSSSBCHHHHHTGGGGTCT-TCCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCcCcHHHHHHHHHHHhh-cCCCCCHHHHHHHHHHhCCCCCC
Confidence 44578888888877766421 11247888877777766544444
No 173
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=24.38 E-value=39 Score=25.75 Aligned_cols=22 Identities=14% Similarity=0.175 Sum_probs=19.0
Q ss_pred cCChhHHHHHHHHHHhcCCCCC
Q 027804 58 RKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 58 ~~dP~FR~~F~~MC~siGVDPL 79 (218)
.-+|+...+|++.|.+.|+|+=
T Consensus 119 ~~~~e~~~~f~~~~~~~G~~~~ 140 (160)
T 3sao_A 119 EVSPTAMAIFRKLARERNYTDE 140 (160)
T ss_dssp SCCHHHHHHHHHHHHTTTCCGG
T ss_pred CCCHHHHHHHHHHHHHcCCCHH
Confidence 3578899999999999999953
No 174
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=24.31 E-value=78 Score=20.63 Aligned_cols=41 Identities=12% Similarity=0.178 Sum_probs=26.7
Q ss_pred CC-cccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 115 GG-LINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 115 GG-li~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.| .|+.+|+...+.+.-. ....++++++...++.+..=|+|
T Consensus 25 ~G~~i~~~el~~~l~~~~~-~g~~~~~~~~~~~~~~~D~~~dg 66 (90)
T 1k8u_A 25 DKHTLSKKELKELIQKELT-IGSKLQDAEIARLMEDLDRNKDQ 66 (90)
T ss_dssp CTTEEEHHHHHHHHHHHSC-CGGGTTSHHHHHHHHHHHHTTTC
T ss_pred CCCcCCHHHHHHHHHHhcc-cCCCCCHHHHHHHHHHhCCCCCC
Confidence 35 8999999888876210 11247777777777776654554
No 175
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=24.28 E-value=36 Score=32.41 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=41.4
Q ss_pred ChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccC----------CC-----cccHHHHH
Q 027804 60 NPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHN----------GG-----LINLQELC 124 (218)
Q Consensus 60 dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~N----------GG-----li~l~el~ 124 (218)
++++-.++..+|..-=+.|-.+. ++...|++.+.++|... -| +.+|--+-
T Consensus 395 s~e~L~~yi~~ar~~~~~p~ls~---------------ea~~yI~~~y~~tR~~~~~~~~~~~~~~giSpR~leaLiRlA 459 (506)
T 3f8t_A 395 SYTLLRRYLLYAIREHPAPELTE---------------EARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLA 459 (506)
T ss_dssp CHHHHHHHHHHHHHHCSCCEECH---------------HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCceeCH---------------HHHHHHHHHHHHHhcCcccccccccccccccHHHHHHHHHHH
Confidence 44444567777763333443322 45556666666666421 11 12222333
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 125 NLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 125 ~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
+...+.++.. .|+++||..|+..++
T Consensus 460 ~A~A~L~gR~--~V~~eDV~~Ai~L~~ 484 (506)
T 3f8t_A 460 KAHARMRLSD--DVEPEDVDIAAELVD 484 (506)
T ss_dssp HHHHHHTTCS--EECHHHHHHHHHHHH
T ss_pred HHHHHHcCcC--CCCHHHHHHHHHHHH
Confidence 3334444433 899999999999886
No 176
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=24.10 E-value=1.2e+02 Score=20.49 Aligned_cols=43 Identities=19% Similarity=0.276 Sum_probs=26.5
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+.|.|+.+|+...+..... ....+|++++...++.+..=|+|
T Consensus 53 d~~G~I~~~el~~~l~~~~~-~g~~~~~~~~~~~~~~~D~~~dg 95 (108)
T 2pvb_A 53 DKSGFIEEDELKLFLQNFSP-SARALTDAETKAFLADGDKDGDG 95 (108)
T ss_dssp TCSSSBCHHHHHTGGGGTCT-TSCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCcCCHHHHHHHHHHHhc-cCCCCCHHHHHHHHHHhCCCCCC
Confidence 34578888888877765421 11247888877777766544443
No 177
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=23.92 E-value=2.4e+02 Score=21.42 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=13.3
Q ss_pred HHHHHHhhhccccCCCcccHHHHHHHH
Q 027804 101 VQIVEICLATRPHNGGLINLQELCNLL 127 (218)
Q Consensus 101 VqIvEvC~~tr~~NGGli~l~el~~~v 127 (218)
.+|.+.....++.+.|-|+..|....+
T Consensus 62 ~~i~~~~d~~~~~~~~~i~~~ef~~~~ 88 (179)
T 3a8r_A 62 VQMFDSLARKRGIVKQVLTKDELKDFY 88 (179)
T ss_dssp HHHHHHHHHHHTCCSSEECHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcCHHHHHHHH
Confidence 344444433334455566666655443
No 178
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=23.86 E-value=1.7e+02 Score=19.67 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=17.4
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK 151 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~ 151 (218)
.|.|+..|+...+... + ..+|++++...++.+.
T Consensus 38 ~G~i~~~el~~~l~~~-g---~~~~~~e~~~l~~~~d 70 (105)
T 1wlz_A 38 TNTISREEFRAICNRR-V---QILTDEQFDRLWNEMP 70 (105)
T ss_dssp SSCBCHHHHHHHHHHH-T---CCCCHHHHHHHHTTSC
T ss_pred CCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHcC
Confidence 3566666666555543 1 1355665555554443
No 179
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=23.66 E-value=1.9e+02 Score=20.19 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=30.9
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+-|.|+.+|+...+... | ..+|++++...++.+.+=|.|.
T Consensus 95 d~~G~I~~~el~~~l~~~-g---~~~~~~~~~~~~~~~d~d~dg~ 135 (148)
T 1m45_A 95 ESTGKVSVGDLRYMLTGL-G---EKLTDAEVDELLKGVEVDSNGE 135 (148)
T ss_dssp SSSSEEEHHHHHHHHHHS-T---TCCCHHHHHHHHTTCCCCTTSE
T ss_pred CCCCcCCHHHHHHHHHHc-C---CCCCHHHHHHHHHHhCCCCCCe
Confidence 445999999999988864 2 3589999988888776555553
No 180
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.64 E-value=45 Score=23.36 Aligned_cols=39 Identities=31% Similarity=0.460 Sum_probs=28.0
Q ss_pred hhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCceEEE
Q 027804 108 LATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGYEVI 160 (218)
Q Consensus 108 ~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf~vi 160 (218)
-..+...|+..+|++.... . .|..|+++++++. .||+|+
T Consensus 40 p~~~~~~g~~~TL~~aa~~----~-----gid~d~l~~~L~~-----~g~~~~ 78 (81)
T 2fi0_A 40 PLMRNTVGRKVSLKQGSKL----A-----GTPMDKIVRTLEA-----NGYEVI 78 (81)
T ss_dssp HHHHTTHHHHCBHHHHHHH----H-----TCCHHHHHHHHHH-----TTCEEE
T ss_pred cHHHhhhcccCcHHHHHHH----c-----CCCHHHHHHHHHH-----cCCEee
Confidence 3444556778888887543 2 3899999999887 578885
No 181
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=23.59 E-value=1.7e+02 Score=19.62 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=28.7
Q ss_pred cCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 113 HNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 113 ~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
.+-|.|+.+|+...+..... ....+|++++...++.+..=|+|
T Consensus 53 d~~G~I~~~el~~~l~~~~~-~g~~~~~~~~~~~~~~~D~~~dg 95 (109)
T 1rwy_A 53 DKSGFIEEDELGSILKGFSS-DARDLSAKETKTLMAAGDKDGDG 95 (109)
T ss_dssp TCSSEECHHHHHTHHHHHCT-TCCCCCHHHHHHHHHHHCTTCSS
T ss_pred CCCCeEcHHHHHHHHHHHhc-cCCCCCHHHHHHHHHHHCCCCCC
Confidence 34588999998888877531 11357888888777776554444
No 182
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=23.43 E-value=1.6e+02 Score=20.86 Aligned_cols=44 Identities=16% Similarity=0.346 Sum_probs=27.3
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+.|.|+.+|....+..........-+.+++..+.+.+-+=|+|+
T Consensus 68 ~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~ 111 (161)
T 1dtl_A 68 GSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGY 111 (161)
T ss_dssp SSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSE
T ss_pred CCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCc
Confidence 35778888887777664322113455667777777777777775
No 183
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=23.26 E-value=89 Score=20.69 Aligned_cols=43 Identities=16% Similarity=0.278 Sum_probs=33.2
Q ss_pred HHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCC
Q 027804 100 GVQIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGN 155 (218)
Q Consensus 100 aVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~ 155 (218)
-.+|+++... +|+-++.+||-..+. ||..-|.+.++.|+.-|-
T Consensus 12 ~~~IL~~L~~----~~~~~s~~eLA~~lg---------lsr~tv~~~l~~L~~~G~ 54 (67)
T 2heo_A 12 EQKILQVLSD----DGGPVAIFQLVKKCQ---------VPKKTLNQVLYRLKKEDR 54 (67)
T ss_dssp HHHHHHHHHH----HCSCEEHHHHHHHHC---------SCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHH----cCCCcCHHHHHHHHC---------cCHHHHHHHHHHHHHCCc
Confidence 3467777643 566689999887764 899999999999998663
No 184
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=23.20 E-value=35 Score=25.44 Aligned_cols=25 Identities=24% Similarity=0.457 Sum_probs=22.4
Q ss_pred cccCChhHHHHHHHHHHhcCCCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDPLA 80 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDPLa 80 (218)
.|+....|+.=|..||...|+||-+
T Consensus 36 kIK~tt~l~KL~~aYc~r~gv~~~s 60 (95)
T 2l76_A 36 PLRMSEPLQSVVDHMATHLGVSPSR 60 (95)
T ss_dssp EECSSSCTHHHHHHHHHHHTSCGGG
T ss_pred EEecCChHHHHHHHHHhhcCCChhh
Confidence 5888889999999999999999864
No 185
>2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens}
Probab=23.15 E-value=87 Score=27.61 Aligned_cols=45 Identities=16% Similarity=0.426 Sum_probs=26.9
Q ss_pred HHHHHHhhhccccC--CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccC
Q 027804 101 VQIVEICLATRPHN--GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 101 VqIvEvC~~tr~~N--GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG 154 (218)
-.|++.....+... .--|+++|+-.. . -|+++||+.+++.|..+-
T Consensus 194 ~~i~~~L~~~~~~~~~~~~isi~~is~~----T-----~i~~~Dii~tL~~l~~l~ 240 (280)
T 2ou2_A 194 QTILEILMGLKSESGERPQITINEISEI----T-----SIKKEDVISTLQYLNLIN 240 (280)
T ss_dssp HHHHHHC-----------CCBHHHHHHH----H-----CBCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhcccccCCCCceeHHHHHHH----h-----CCCHHHHHHHHHHCCcEE
Confidence 45666665433221 116888887644 3 399999999999988773
No 186
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=23.13 E-value=1.6e+02 Score=22.95 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=23.9
Q ss_pred hccccC-CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q 027804 109 ATRPHN-GGLINLQELCNLLRQRRKSNREAVSEDDCLRAIS 148 (218)
Q Consensus 109 ~tr~~N-GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~ 148 (218)
..-+.| .|.|+.+|+...+..........+|++++..-++
T Consensus 129 ~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~ 169 (226)
T 2zfd_A 129 QLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIID 169 (226)
T ss_dssp HHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 333444 4889999998888632111113578888765554
No 187
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=23.10 E-value=62 Score=28.80 Aligned_cols=26 Identities=23% Similarity=0.410 Sum_probs=21.4
Q ss_pred CccchHH-HHHHHHHHHhhhccccCCCcccHHHHHH
Q 027804 91 GIGDFYY-ELGVQIVEICLATRPHNGGLINLQELCN 125 (218)
Q Consensus 91 G~gdFyy-eLaVqIvEvC~~tr~~NGGli~l~el~~ 125 (218)
|...||. ++|.+||+- |+|+++||-.
T Consensus 189 G~~~FY~G~iA~~iv~~---------G~lt~~DLa~ 215 (323)
T 3g9k_L 189 GAKGFYEGGVARAISKT---------AKISLEDIKG 215 (323)
T ss_dssp TTHHHHSHHHHHHHHHH---------HTCCHHHHHT
T ss_pred CcccccCCHHHHHHHHc---------CCCCHHHHhh
Confidence 5668887 899999997 8888888764
No 188
>2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A
Probab=23.07 E-value=53 Score=29.08 Aligned_cols=41 Identities=22% Similarity=0.379 Sum_probs=25.4
Q ss_pred HHHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccC
Q 027804 102 QIVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLG 154 (218)
Q Consensus 102 qIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG 154 (218)
.|++... +.+++-|+++|+-.. .+ |+++||+.+++.|..|.
T Consensus 202 ~il~~L~---~~~~~~isi~~is~~----T~-----i~~~DIi~tL~~l~~l~ 242 (284)
T 2ozu_A 202 VILECLY---HQNDKQISIKKLSKL----TG-----ICPQDITSTLHHLRMLD 242 (284)
T ss_dssp HHHHHHH---HC-----CHHHHHHH----HC-----BCHHHHHHHHHHTTCC-
T ss_pred HHHHHHH---hcCCCcEeHHHHHHH----hC-----CCHHHHHHHHHHCCCEE
Confidence 3444443 346788999887654 33 99999999999998774
No 189
>1dzk_A PIG OBP, odorant-binding protein; lipocalin, transport, olfaction, sensory transduction; HET: PRZ; 1.48A {Sus scrofa} SCOP: b.60.1.1 PDB: 1dzj_A* 1dzm_A* 1dzp_A* 1e00_A* 1e02_A* 1e06_A* 1hqp_A* 1a3y_A
Probab=23.00 E-value=46 Score=24.91 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=18.2
Q ss_pred CChhHHHHHHHHHHhcCCCC
Q 027804 59 KNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 59 ~dP~FR~~F~~MC~siGVDP 78 (218)
-+|+...+|++.|.++|+|+
T Consensus 124 ~~~e~~~~f~~~~~~~G~~~ 143 (157)
T 1dzk_A 124 IEDQDLEKFKEVTRENGIPE 143 (157)
T ss_dssp CCHHHHHHHHHHHHHTTCCG
T ss_pred CCHHHHHHHHHHHHHcCCCH
Confidence 47899999999999999995
No 190
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=22.97 E-value=43 Score=25.16 Aligned_cols=20 Identities=15% Similarity=0.301 Sum_probs=18.2
Q ss_pred CChhHHHHHHHHHHhcCCCC
Q 027804 59 KNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 59 ~dP~FR~~F~~MC~siGVDP 78 (218)
-+|+...+|.+.|.+.|+|+
T Consensus 123 l~~e~~~~f~~~~~~~G~~~ 142 (156)
T 1bj7_A 123 FTPEELEKYQQLNSERGVPN 142 (156)
T ss_dssp CCHHHHHHHHHHHHHHTCCG
T ss_pred CCHHHHHHHHHHHHHcCCCH
Confidence 47899999999999999995
No 191
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=22.96 E-value=1.8e+02 Score=20.15 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=28.8
Q ss_pred ccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCc
Q 027804 112 PHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNG 156 (218)
Q Consensus 112 ~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~G 156 (218)
..+.|.|+.+|+...+... | ..+|++++...++. .+=++|
T Consensus 96 ~d~~G~i~~~el~~~l~~~-g---~~~~~~~~~~~~~~-d~~~dg 135 (149)
T 2mys_C 96 KEGNGTVMGAELRHVLATL-G---EKMTEEEVEELMKG-QEDSNG 135 (149)
T ss_pred CCCCceEcHHHHHHHHHHh-C---CCCCHHHHHHHHhh-CCCCCC
Confidence 3456899999999888764 2 25889988888777 544444
No 192
>2krc_A DNA-directed RNA polymerase subunit delta; delta subunit, GRAM-positive bacteria, nucleotidyltransferase, transcription, transferase; NMR {Bacillus subtilis}
Probab=22.67 E-value=37 Score=25.32 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=40.9
Q ss_pred HHHHhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhcc---ccCCceEEEEECCEEE
Q 027804 103 IVEICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLK---VLGNGYEVISVGKKKL 167 (218)
Q Consensus 103 IvEvC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~---~LG~Gf~vi~ig~k~~ 167 (218)
.||+..+-...+|.-|++.||...+.+..+ +|.+|+.+.+..+= .+++-| |.+|..+|
T Consensus 15 miDvAy~iL~~~~~~~~F~dL~~eV~~~~~-----~s~ee~~~~iaqfYTdLn~DGRF--i~lGen~W 75 (99)
T 2krc_A 15 LVEIAHELFEEHKKPVPFQELLNEIASLLG-----VKKEELGDRIAQFYTDLNIDGRF--LALSDQTW 75 (99)
T ss_dssp HHHHHHHHHHHHCSCEEHHHHHHHHHHHHT-----SCGGGGTHHHHHHHHHHHTCSSC--EESSSSEE
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHHhccCCe--eECCCCce
Confidence 455555555566889999999999999865 78888877776553 445555 45665555
No 193
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=22.57 E-value=1.9e+02 Score=20.38 Aligned_cols=49 Identities=10% Similarity=0.079 Sum_probs=32.3
Q ss_pred HhhhccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 106 ICLATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 106 vC~~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
+....-..+.|.|+..|.+..+...... .-+.+++..+.+.+..=|+|+
T Consensus 64 l~~~~d~~~~g~i~~~eF~~~~~~~~~~---~~~~~~~~~~F~~~D~d~~G~ 112 (161)
T 3fwb_A 64 LIDEYDSEGRHLMKYDDFYIVMGEKILK---RDPLDEIKRAFQLFDDDHTGK 112 (161)
T ss_dssp HHHHHCTTSSSCEEHHHHHHHHHHHHHT---CCHHHHHHHHHHHHCTTCSSE
T ss_pred HHHHhCcCCCCeEeHHHHHHHHHHHHhc---CCcHHHHHHHHHHHcCCCCCe
Confidence 3333333445889999988877764322 235778888888887777776
No 194
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=22.44 E-value=2.1e+02 Score=20.44 Aligned_cols=39 Identities=28% Similarity=0.479 Sum_probs=28.9
Q ss_pred CCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHh--hccccCCc
Q 027804 114 NGGLINLQELCNLLRQRRKSNREAVSEDDCLRAIS--KLKVLGNG 156 (218)
Q Consensus 114 NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~--~L~~LG~G 156 (218)
+-|.|+.+|+...+... | ..+|++++...++ .+..=|.|
T Consensus 98 ~~G~I~~~El~~~l~~~-g---~~~~~~~~~~~~~~~~~D~d~dg 138 (159)
T 2ovk_C 98 GQGLISSAEIRNVLKML-G---ERITEDQCNDIFTFCDIREDIDG 138 (159)
T ss_dssp SSSEECHHHHHHHHHHS-S---SCCCHHHHHHHHHHTTCCCCTTC
T ss_pred CCCcCcHHHHHHHHHHh-C---CCCCHHHHHHHHHHhcCCCCCCC
Confidence 45899999999888864 2 3589999888888 66554555
No 195
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=22.42 E-value=1.8e+02 Score=20.98 Aligned_cols=15 Identities=7% Similarity=0.286 Sum_probs=8.7
Q ss_pred CCcccHHHHHHHHHh
Q 027804 115 GGLINLQELCNLLRQ 129 (218)
Q Consensus 115 GGli~l~el~~~v~k 129 (218)
.|.|+.+|....+.+
T Consensus 74 dG~I~~~Ef~~~~~~ 88 (185)
T 2sas_A 74 DDVVSWEEYLAMWEK 88 (185)
T ss_dssp SSCEEHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHH
Confidence 356666666655544
No 196
>4a8e_A XER A, probable tyrosine recombinase XERC-like; cell cycle, chromosome dimer resolution, PAB0255; 2.99A {Pyrococcus abyssi}
Probab=22.14 E-value=1.3e+02 Score=23.81 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhccccCCCcccHHHHHHHHHhhcCCC---CCC
Q 027804 61 PTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINLQELCNLLRQRRKSN---REA 137 (218)
Q Consensus 61 P~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~tr~~NGGli~l~el~~~v~k~rg~~---~~~ 137 (218)
..++..|+++|...|+ ++.. -+|=...|...++ +| +++.++...+....... =..
T Consensus 206 ~~~~~~~~~~~~~~g~-~~~~-----------H~lRht~at~l~~--------~g--~~~~~i~~~lGH~~~~~t~~Y~~ 263 (292)
T 4a8e_A 206 KTVWRLVKKYGRKAGV-ELTP-----------HQLRHSFATHMLE--------RG--IDIRIIQELLGHSNLSTTQIYTK 263 (292)
T ss_dssp HHHHHHHHHHHHHTTC-CCCH-----------HHHHHHHHHHHHH--------TT--CCHHHHHHHHCC-----CCCCST
T ss_pred HHHHHHHHHHHHHcCC-CcCc-----------ccchhHHHHHHHH--------cC--CCHHHHHHHcCCCCcchhhhhhc
Confidence 4578889999999888 3321 1222222222222 22 45555555544322111 126
Q ss_pred CCHHHHHHHHhhccccCCce
Q 027804 138 VSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 138 IS~dDI~rAi~~L~~LG~Gf 157 (218)
++++++.+|++.+.+++.+-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~ 283 (292)
T 4a8e_A 264 VSTKHLKEAVKKAKLVESII 283 (292)
T ss_dssp THHHHHHHHTTTTTTC----
T ss_pred CCHHHHHHHHHhcChHHHHh
Confidence 88999999999999998753
No 197
>3ihr_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; center for eukaryotic structural genomics, UCH37, UCH-L5, UB hydrolase, proteasome, INO80; 2.95A {Homo sapiens}
Probab=21.84 E-value=37 Score=30.49 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=19.1
Q ss_pred cccCChhHHHHHHHHHHhcCCCCC
Q 027804 56 DIRKNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 56 eI~~dP~FR~~F~~MC~siGVDPL 79 (218)
.|-+||++ |.+++..+||.++
T Consensus 10 pLESnP~V---ft~ll~~LGv~~~ 30 (328)
T 3ihr_A 10 LMESDPGV---FTELIKGFGCRGA 30 (328)
T ss_dssp CCCCCHHH---HHHHHHHHTCBSE
T ss_pred eecCCHHH---HHHHHHHcCCCce
Confidence 57899999 9999999999875
No 198
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=21.73 E-value=2.2e+02 Score=20.17 Aligned_cols=72 Identities=11% Similarity=0.229 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-Hhhc-cccCChhHHHHHHHHHH-hcCC---CC-CCCCCCccccccCccchHHHHHHHHHH
Q 027804 33 DLMKEQLATFRSQLEDFAR-KHKN-DIRKNPTFRSQFHEMCA-KVGV---DP-LASNKGFWAELLGIGDFYYELGVQIVE 105 (218)
Q Consensus 33 ~~L~~QL~~F~~~L~~FA~-kH~~-eI~~dP~FR~~F~~MC~-siGV---DP-Las~k~~ws~~lG~gdFyyeLaVqIvE 105 (218)
..|..++..++..+..|.. +..+ .|..+ .|++++. .+|. +| +. -+...+++.
T Consensus 5 ~~l~~~~~~l~~~F~~fD~~dgdG~~Is~~-----El~~~l~~~lg~~~~~~~~~----------------~~~v~~l~~ 63 (113)
T 1xk4_C 5 SQLERNIETIINTFHQYSVKLGHPDTLNQG-----EFKELVRKDLQNFLKKENKN----------------EKVIEHIME 63 (113)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSSSTTSBCHH-----HHHHHHHHHTTTTTTTGGGC----------------HHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCEECHH-----HHHHHHHHHhhhhhcccccC----------------HHHHHHHHH
Confidence 3577788889999999995 6666 67654 4556666 5663 12 11 111222332
Q ss_pred HhhhccccC-CCcccHHHHHHHHHh
Q 027804 106 ICLATRPHN-GGLINLQELCNLLRQ 129 (218)
Q Consensus 106 vC~~tr~~N-GGli~l~el~~~v~k 129 (218)
.-+.| .|.|+.+|.+..+.+
T Consensus 64 ----~~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 64 ----DLDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp ----HHCTTCSSSBCHHHHHHHHHH
T ss_pred ----HhCCCCCCCEeHHHHHHHHHH
Confidence 22333 588999999888765
No 199
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=21.37 E-value=1.1e+02 Score=29.19 Aligned_cols=103 Identities=9% Similarity=0.138 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCC--C---CCcc---ccccCccchHHHHHH-----HHHHHhh
Q 027804 42 FRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLAS--N---KGFW---AELLGIGDFYYELGV-----QIVEICL 108 (218)
Q Consensus 42 F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas--~---k~~w---s~~lG~gdFyyeLaV-----qIvEvC~ 108 (218)
+++....|-++..+.|.-+ .|+.++.++|.+|-.. . +.+- ...+...+|..=+.. +|.++-.
T Consensus 13 l~~~F~~fD~d~dG~Is~~-----El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~~el~~aF~ 87 (624)
T 1djx_A 13 IHSCLRKADKNKDNKMNFK-----ELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAEIDRAFE 87 (624)
T ss_dssp ------------------------------------------------------------CTTHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHH-----HHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccHHHHHHHHH
Confidence 4455555656666666654 4556777777664310 0 0000 011223444322211 1222222
Q ss_pred hccccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccc
Q 027804 109 ATRPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKV 152 (218)
Q Consensus 109 ~tr~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~ 152 (218)
. -+.+.|.|+.+|+...+...-+.. .+|++++..-++...+
T Consensus 88 ~-fD~~~G~Is~~EL~~fL~~~qge~--~ls~ee~~~ii~~~d~ 128 (624)
T 1djx_A 88 E-AAGSAETLSVERLVTFLQHQQREE--EAGPALALSLIERYEP 128 (624)
T ss_dssp H-HHTTSSSEEHHHHHHHHHHTSCCS--SCSHHHHHHHHHHHCC
T ss_pred H-hcCCCCeecHHHHHHHHHHHhCCC--CCCHHHHHHHHHHhCC
Confidence 2 234689999999999988643321 3788887777766543
No 200
>2hlv_A Odorant-binding protein; domain swapping, transport protein; HET: LIK; 1.65A {Bos taurus} PDB: 1gt1_A* 1gt3_A* 1gt4_A* 1gt5_A* 1hn2_A* 1obp_A 1g85_A 1pbo_A*
Probab=21.29 E-value=52 Score=24.81 Aligned_cols=20 Identities=15% Similarity=0.263 Sum_probs=18.2
Q ss_pred CChhHHHHHHHHHHhcCCCC
Q 027804 59 KNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 59 ~dP~FR~~F~~MC~siGVDP 78 (218)
-+|+...+|++.|.+.|+|+
T Consensus 125 ~~~e~~~~f~~~~~~~G~~~ 144 (160)
T 2hlv_A 125 VEDEDLEKFWKLTEDKGIDK 144 (160)
T ss_dssp CCHHHHHHHHHHHHHTTCCG
T ss_pred CCHHHHHHHHHHHHHcCCCH
Confidence 47899999999999999995
No 201
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=21.21 E-value=2e+02 Score=21.23 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=32.7
Q ss_pred HHHhhhccccCC-CcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 104 VEICLATRPHNG-GLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 104 vEvC~~tr~~NG-Gli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
++.....-+.|| |.|+.+|+...+... | ++++++...++.+..=|.|.
T Consensus 111 ~~~~F~~~D~d~dG~I~~~E~~~~l~~~-g-----~~~~~~~~~~~~~D~d~dG~ 159 (191)
T 2ccm_A 111 MNFMFDVNDTSGDNIIDKHEYSTVYMSY-G-----IPKSDCDAAFDTLSDGGKTM 159 (191)
T ss_dssp HHHHHHHHCTTCSSBCCHHHHHHHHHTT-T-----CCHHHHHHHHHHHTTTTTSC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh-C-----CCHHHHHHHHHHhCCCCCCC
Confidence 333444445554 899999999888653 2 78888888888776655553
No 202
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=21.17 E-value=1.3e+02 Score=18.92 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCC
Q 027804 34 LMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 34 ~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
++.+.+.+=++.+..+-+-. .+|... ....+|..+||+|
T Consensus 31 ~lA~~~gis~~~i~~~e~g~-----~~~~~~-~l~~l~~~l~~~~ 69 (74)
T 1y7y_A 31 TLAFLSGLDRSYVGGVERGQ-----RNVSLV-NILKLATALDIEP 69 (74)
T ss_dssp HHHHHHTCCHHHHHHHHTTC-----SCCBHH-HHHHHHHHTTSCG
T ss_pred HHHHHHCcCHHHHHHHHCCC-----CCCCHH-HHHHHHHHhCcCH
Confidence 55555555556666554321 456654 5788999999986
No 203
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6
Probab=20.97 E-value=29 Score=29.66 Aligned_cols=21 Identities=29% Similarity=0.555 Sum_probs=18.5
Q ss_pred ccccCChhHHHHHHHHHHhcCCCC
Q 027804 55 NDIRKNPTFRSQFHEMCAKVGVDP 78 (218)
Q Consensus 55 ~eI~~dP~FR~~F~~MC~siGVDP 78 (218)
-.|.+||++ |.+++..+||.|
T Consensus 9 ~plESnP~V---ft~l~~~lGv~~ 29 (235)
T 1cmx_A 9 VPIESNPEV---FTNFAHKLGLKN 29 (235)
T ss_dssp CCEECCHHH---HHHHHHHHTBCT
T ss_pred eeecCCHHH---HHHHHHHcCCCC
Confidence 368999999 999999999954
No 204
>3aqo_A Probable secdf protein-export membrane protein; periplasmic domain, translocon, cell membrane, M protein transport, translocation; 2.60A {Thermus thermophilus}
Probab=20.93 E-value=1.6e+02 Score=24.50 Aligned_cols=57 Identities=25% Similarity=0.312 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHhhcc----ccC-CceEEEEECCEEEEEecCCCcchhHHHHHHHHhhccccc
Q 027804 137 AVSEDDCLRAISKLK----VLG-NGYEVISVGKKKLVRSVPTELNKDHNQILELAQVTSILY 193 (218)
Q Consensus 137 ~IS~dDI~rAi~~L~----~LG-~Gf~vi~ig~k~~vrSvP~ELs~Dq~~vLe~a~~~~~~~ 193 (218)
.+|++++.+|+..|+ .|| +.-.|-.-|+...+..+|..-+.++..+.++....+.|+
T Consensus 19 ~~~~~~~~~~~~ilr~Rvn~~GvsEp~I~~~G~~rI~VelPGv~d~~~~~a~~llg~ta~Le 80 (229)
T 3aqo_A 19 NPTLDDLEKARTVLENRINALGVAEPLIQIQGQKRIVVELPGLSQADQDRALKLIGQRAVLE 80 (229)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSSCEEEEETTTEEEEEECSCCHHHHHHHHHHHHCCCCEE
T ss_pred CCCHHHHHHHHHHHHHHHhhcCCCccEEEEeCCCeEEEECCCCCCHHHHHHHHHhCCceEEE
Confidence 478999999999986 566 455677778889999999765555544888877766654
No 205
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A
Probab=20.86 E-value=1.9e+02 Score=26.84 Aligned_cols=63 Identities=13% Similarity=0.147 Sum_probs=44.9
Q ss_pred HHHHHHH--HHHHhhccc----------cCChhHHHHHHHHHHhcCCCCCCCC--CC----ccccccCccchHHHHHHHH
Q 027804 42 FRSQLED--FARKHKNDI----------RKNPTFRSQFHEMCAKVGVDPLASN--KG----FWAELLGIGDFYYELGVQI 103 (218)
Q Consensus 42 F~~~L~~--FA~kH~~eI----------~~dP~FR~~F~~MC~siGVDPLas~--k~----~ws~~lG~gdFyyeLaVqI 103 (218)
.+.+|-+ ||++|++.. |+.|++-....+-+.-+|+||=..- +| ++.+ ---+-|++.+.++
T Consensus 19 ~rtal~n~l~Ar~~~G~filRieDtD~~R~~~~~~~~I~~dl~wlGl~wd~~~~~gG~~gp~~QS--~r~~~y~~~~~~L 96 (468)
T 1j09_A 19 AYIALFNYAWARRNGGRFIVRIEDTDRARYVPGAEERILAALKWLGLSYDEGPDVGGPHGPYRQS--ERLPLYQKYAEEL 96 (468)
T ss_dssp HHHHHHHHHHHHHTTCEEEECBCCCCTTSCCTTHHHHHHHHHHHTTCCCSBBTTTBCTTCCCBGG--GCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCcCCCcccChHHHHHHHHHHHHcCCCCCCCCCCCCCCCCeecc--CCHHHHHHHHHHH
Confidence 4566666 688888766 7789999999999999999975311 00 1110 0148899999999
Q ss_pred HHH
Q 027804 104 VEI 106 (218)
Q Consensus 104 vEv 106 (218)
++-
T Consensus 97 ~~~ 99 (468)
T 1j09_A 97 LKR 99 (468)
T ss_dssp HHH
T ss_pred HHc
Confidence 986
No 206
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=20.58 E-value=1.8e+02 Score=20.04 Aligned_cols=13 Identities=23% Similarity=0.174 Sum_probs=12.1
Q ss_pred CCCHHHHHHHHhh
Q 027804 137 AVSEDDCLRAISK 149 (218)
Q Consensus 137 ~IS~dDI~rAi~~ 149 (218)
.|+.|||.-||+.
T Consensus 53 tv~~eDVkLAi~~ 65 (68)
T 1taf_A 53 TIDLDDVRLATEV 65 (68)
T ss_dssp SBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 7999999999986
No 207
>3kff_A MUP 4, major urinary protein 4; pheromone, lipocalin, beta barrel, DI bond, pheromone-binding, secreted, transport, transport Pro; 0.96A {Mus musculus} SCOP: b.60.1.1 PDB: 3kfg_A 3kfh_A 3kfi_A 2l9c_A 2lb6_A 1i06_A 1i05_A* 1i04_A 1mup_A 1znd_A 1qy0_A* 1qy2_A* 1qy1_A 1zne_A 1zng_A 1znh_A 1znk_A* 1znl_A* 2dm5_A* 2ozq_A ...
Probab=20.52 E-value=55 Score=24.92 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=18.3
Q ss_pred CChhHHHHHHHHHHhcCCCCC
Q 027804 59 KNPTFRSQFHEMCAKVGVDPL 79 (218)
Q Consensus 59 ~dP~FR~~F~~MC~siGVDPL 79 (218)
-+|+...+|++.|.+.|+|+=
T Consensus 126 ~~~~~~~~f~~~~~~~G~~~~ 146 (162)
T 3kff_A 126 LNSDIKEKFVKLCEEHGIIKE 146 (162)
T ss_dssp CCHHHHHHHHHHHHHTTCCGG
T ss_pred CCHHHHHHHHHHHHHcCCCHH
Confidence 478888999999999999953
No 208
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=20.51 E-value=93 Score=26.06 Aligned_cols=65 Identities=15% Similarity=0.289 Sum_probs=43.2
Q ss_pred HHHHHHhhcc---ccCCceEEEEECC----EEEEEec-CCC----------cchhHHHHHHHHhhccccccccccCcchh
Q 027804 142 DCLRAISKLK---VLGNGYEVISVGK----KKLVRSV-PTE----------LNKDHNQILELAQVTSILYQCFPFPHISF 203 (218)
Q Consensus 142 DI~rAi~~L~---~LG~Gf~vi~ig~----k~~vrSv-P~E----------Ls~Dq~~vLe~a~~~~~~~~~~~~~~~~~ 203 (218)
++.++|+.+. .+..|=.+++-++ |+.|-.| |.- |..-...+|++|.++++ .++-||-||-
T Consensus 82 ~L~~ec~~~~~~~~~~~G~a~iT~g~~Lp~k~VIHtVgP~~~~~~~~~~~~L~~~y~~~L~~A~e~~i--~SIAfPaIsT 159 (221)
T 3q71_A 82 ELQEELDTVGQGVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSL--KSIAFPAIGT 159 (221)
T ss_dssp HHHHHHHHHHHTSCCCTTCEEEEECTTSSSSEEEEECCCCCTTTCHHHHHHHHHHHHHHHHHHHHTTC--CEEEEECTTS
T ss_pred HHHHHHHHHhccCCCCCCeEEEEcCCCCCCCEEEEeCCCCCcCCCchHHHHHHHHHHHHHHHHHHhCC--ceEeeccccC
Confidence 5677777765 4556666777665 4555554 321 22234457888999988 8999999998
Q ss_pred HHHHH
Q 027804 204 GLFVF 208 (218)
Q Consensus 204 ~~~~~ 208 (218)
|.|-|
T Consensus 160 G~~G~ 164 (221)
T 3q71_A 160 GNLGF 164 (221)
T ss_dssp STTCC
T ss_pred CCCCC
Confidence 87643
No 209
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=20.31 E-value=55 Score=27.01 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=23.4
Q ss_pred hhHHHHHHHHhhccccccccccCcchhHHHHH
Q 027804 177 KDHNQILELAQVTSILYQCFPFPHISFGLFVF 208 (218)
Q Consensus 177 ~Dq~~vLe~a~~~~~~~~~~~~~~~~~~~~~~ 208 (218)
.=...+|++|.++++ ..+-||-||-|.|-|
T Consensus 127 ~~y~~~L~~A~~~~i--~SIAfP~IstG~~G~ 156 (211)
T 1vhu_A 127 KAFLGPLEKAEEMGV--ESIAFPAVSAGIYGC 156 (211)
T ss_dssp HHHHHHHHHHHHHTC--CEEEECCTTSSTTCC
T ss_pred HHHHHHHHHHHHcCC--CEEEeccccCCCCCC
Confidence 334567888998887 889999999887643
No 210
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=20.26 E-value=2.5e+02 Score=20.31 Aligned_cols=90 Identities=9% Similarity=0.123 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccCChhHHHHHHHHHHhcCCCCCCCCCCccccccCccchHHHHHHHHHHHhhhc
Q 027804 31 RTDLMKEQLATFRSQLEDFARKHKNDIRKNPTFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLAT 110 (218)
Q Consensus 31 ~~~~L~~QL~~F~~~L~~FA~kH~~eI~~dP~FR~~F~~MC~siGVDPLas~k~~ws~~lG~gdFyyeLaVqIvEvC~~t 110 (218)
++..+-..+...+.....|-.++.+.|..+ .|++++.++|..+ . -+-...++..+
T Consensus 63 eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-----el~~~l~~~g~~~-~----------------~~~~~~~~~~~--- 117 (167)
T 1gjy_A 63 EFKELWAVLNGWRQHFISFDSDRSGTVDPQ-----ELQKALTTMGFRL-N----------------PQTVNSIAKRY--- 117 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSEECHH-----HHHHHHHTTTCCC-C----------------HHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcCCHH-----HHHHHHHHcCCCC-C----------------HHHHHHHHHHh---
Confidence 333343444455555555555555555443 3556666666431 1 11223333333
Q ss_pred cccCCCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhccccCCce
Q 027804 111 RPHNGGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKLKVLGNGY 157 (218)
Q Consensus 111 r~~NGGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L~~LG~Gf 157 (218)
.+.|-|+.+|.+..+.+. +++.++.+.+.+=|+|+
T Consensus 118 --d~dg~i~~~eF~~~~~~~----------~~~~~~F~~~D~d~~G~ 152 (167)
T 1gjy_A 118 --STSGKITFDDYIACCVKL----------RALTDSFRRRDSAQQGM 152 (167)
T ss_dssp --CBTTBEEHHHHHHHHHHH----------HHHHHHHHHHCTTCCSE
T ss_pred --CcCCcCcHHHHHHHHHHH----------HHHHHHHHHhCCCCCee
Confidence 345789999998887663 56777777777767775
No 211
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A
Probab=20.09 E-value=88 Score=23.79 Aligned_cols=28 Identities=21% Similarity=0.141 Sum_probs=20.6
Q ss_pred CCcccHHHHHHHHHhhcCCCCCCCCHHHHHHHHhhc
Q 027804 115 GGLINLQELCNLLRQRRKSNREAVSEDDCLRAISKL 150 (218)
Q Consensus 115 GGli~l~el~~~v~k~rg~~~~~IS~dDI~rAi~~L 150 (218)
|....+.+...++.+ ||.+||.++++.+
T Consensus 153 g~~~~~~~~~~~i~~--------vT~~dv~~~a~~~ 180 (197)
T 3ih6_A 153 GDWRLFFLQRDRVRE--------AKLDDVQRAAVAY 180 (197)
T ss_dssp TCTTHHHHHHHHHHT--------CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh--------CCHHHHHHHHHHh
Confidence 444556666666664 9999999999864
Done!