Query 027805
Match_columns 218
No_of_seqs 147 out of 1157
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 02:33:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 3.9E-77 1.3E-81 534.9 24.0 203 4-208 2-204 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 6.7E-77 2.3E-81 534.3 21.6 207 1-208 1-208 (337)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 6.7E-76 2.3E-80 527.6 23.3 203 3-208 4-208 (338)
4 3h9e_O Glyceraldehyde-3-phosph 100.0 2.6E-75 8.9E-80 525.5 23.6 203 3-208 7-210 (346)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 9.9E-76 3.4E-80 529.8 20.2 204 3-208 2-221 (359)
6 3doc_A Glyceraldehyde 3-phosph 100.0 2.4E-75 8.2E-80 523.9 21.6 202 3-208 2-206 (335)
7 4dib_A GAPDH, glyceraldehyde 3 100.0 4.5E-75 1.5E-79 523.1 19.8 202 3-208 4-207 (345)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 2.2E-72 7.5E-77 507.5 17.8 202 2-208 20-227 (356)
9 2b4r_O Glyceraldehyde-3-phosph 100.0 5.9E-71 2E-75 497.9 21.1 206 1-208 9-217 (345)
10 1obf_O Glyceraldehyde 3-phosph 100.0 1.6E-69 5.6E-74 487.2 22.9 201 4-208 2-207 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 4.7E-70 1.6E-74 491.7 19.1 202 3-208 2-205 (342)
12 2d2i_A Glyceraldehyde 3-phosph 100.0 1.3E-63 4.5E-68 455.5 22.0 206 2-211 1-211 (380)
13 2g82_O GAPDH, glyceraldehyde-3 100.0 1.7E-63 5.7E-68 448.2 21.1 203 4-211 1-205 (331)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 2.4E-62 8.1E-67 442.0 23.5 206 2-211 1-211 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 4.6E-62 1.6E-66 439.7 20.7 204 4-211 2-209 (337)
16 3cps_A Glyceraldehyde 3-phosph 100.0 8.7E-62 3E-66 440.3 20.5 208 2-211 16-227 (354)
17 3e5r_O PP38, glyceraldehyde-3- 100.0 2.6E-61 8.8E-66 434.9 22.3 210 1-211 1-211 (337)
18 3cmc_O GAPDH, glyceraldehyde-3 100.0 5E-61 1.7E-65 432.6 21.4 204 4-211 2-207 (334)
19 1u8f_O GAPDH, glyceraldehyde-3 100.0 6.9E-61 2.3E-65 431.7 21.7 209 1-211 1-209 (335)
20 1gad_O D-glyceraldehyde-3-phos 100.0 3.4E-60 1.2E-64 426.5 21.4 204 4-211 2-206 (330)
21 1hdg_O Holo-D-glyceraldehyde-3 100.0 2.7E-60 9.3E-65 427.5 20.4 204 4-211 1-207 (332)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 8.1E-60 2.8E-64 425.4 20.0 205 3-211 2-211 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 1.5E-45 5E-50 332.9 8.0 181 1-211 1-190 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 4.7E-36 1.6E-40 269.3 16.0 172 4-209 1-192 (331)
25 1cf2_P Protein (glyceraldehyde 100.0 2.7E-36 9.2E-41 271.5 6.0 179 4-211 2-186 (337)
26 2r00_A Aspartate-semialdehyde 100.0 1.7E-34 5.7E-39 259.6 17.1 176 1-209 1-198 (336)
27 2czc_A Glyceraldehyde-3-phosph 100.0 1.2E-34 4.2E-39 259.8 6.7 179 2-211 1-185 (334)
28 2hjs_A USG-1 protein homolog; 100.0 1.4E-33 4.8E-38 254.0 9.7 179 2-211 5-202 (340)
29 1t4b_A Aspartate-semialdehyde 100.0 7.6E-34 2.6E-38 258.3 2.5 181 4-211 2-229 (367)
30 1b7g_O Protein (glyceraldehyde 100.0 1E-32 3.5E-37 248.4 9.7 180 4-209 2-183 (340)
31 2ep5_A 350AA long hypothetical 100.0 1.2E-31 4E-36 242.1 5.8 183 2-212 3-201 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 3.7E-30 1.3E-34 232.3 9.3 184 2-212 7-207 (354)
33 1xyg_A Putative N-acetyl-gamma 100.0 6.6E-30 2.3E-34 231.6 9.8 177 1-212 14-218 (359)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 2.1E-28 7.3E-33 220.6 12.0 177 1-213 1-205 (345)
35 3pwk_A Aspartate-semialdehyde 99.9 7.9E-26 2.7E-30 205.6 16.2 153 3-188 2-162 (366)
36 3tz6_A Aspartate-semialdehyde 99.9 1.9E-25 6.3E-30 201.7 16.9 153 4-189 2-164 (344)
37 3pzr_A Aspartate-semialdehyde 99.9 1.3E-26 4.3E-31 211.1 5.8 153 4-186 1-166 (370)
38 4dpk_A Malonyl-COA/succinyl-CO 99.9 2E-25 6.9E-30 202.4 10.8 182 3-211 7-202 (359)
39 3uw3_A Aspartate-semialdehyde 99.9 3.6E-26 1.2E-30 208.6 4.9 154 3-186 4-170 (377)
40 4dpl_A Malonyl-COA/succinyl-CO 99.9 3E-25 1E-29 201.3 10.2 182 3-211 7-202 (359)
41 2nqt_A N-acetyl-gamma-glutamyl 99.9 2.4E-25 8.2E-30 201.4 7.9 180 1-208 7-213 (352)
42 3hsk_A Aspartate-semialdehyde 99.9 3.2E-24 1.1E-28 195.9 9.5 169 1-189 17-208 (381)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 5.9E-23 2E-27 184.8 5.7 168 4-199 5-205 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.8 1.2E-19 4E-24 164.1 6.0 156 3-189 13-194 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.7 6.9E-08 2.4E-12 85.5 10.5 155 1-184 2-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.4 4.1E-07 1.4E-11 80.3 7.9 91 1-127 1-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.4 1.1E-06 3.6E-11 77.1 9.1 91 1-126 7-97 (304)
48 3gdo_A Uncharacterized oxidore 98.2 2.7E-06 9.3E-11 75.6 8.1 95 1-127 3-98 (358)
49 3e18_A Oxidoreductase; dehydro 98.2 2.7E-06 9.1E-11 75.8 7.6 96 1-127 3-98 (359)
50 3ec7_A Putative dehydrogenase; 98.2 3.6E-06 1.2E-10 74.9 7.6 99 1-127 21-120 (357)
51 3fhl_A Putative oxidoreductase 98.1 4.5E-06 1.6E-10 74.2 7.7 95 1-127 3-98 (362)
52 3kux_A Putative oxidoreductase 98.1 6.4E-06 2.2E-10 72.9 8.5 94 1-126 4-99 (352)
53 3db2_A Putative NADPH-dependen 98.1 5.3E-06 1.8E-10 73.3 7.5 96 2-127 4-99 (354)
54 3ezy_A Dehydrogenase; structur 98.1 5.7E-06 2E-10 72.9 7.2 97 2-127 1-97 (344)
55 3evn_A Oxidoreductase, GFO/IDH 98.1 5.3E-06 1.8E-10 72.7 6.8 98 1-127 3-100 (329)
56 4fb5_A Probable oxidoreductase 98.1 7.8E-06 2.7E-10 72.1 7.7 98 1-127 23-127 (393)
57 4h3v_A Oxidoreductase domain p 98.1 3.2E-06 1.1E-10 74.5 5.2 98 1-127 4-108 (390)
58 4hkt_A Inositol 2-dehydrogenas 98.1 5.4E-06 1.8E-10 72.6 6.6 94 3-127 3-96 (331)
59 3euw_A MYO-inositol dehydrogen 98.1 8.8E-06 3E-10 71.6 7.9 97 1-127 2-98 (344)
60 3e9m_A Oxidoreductase, GFO/IDH 98.1 4.5E-06 1.6E-10 73.3 6.0 98 1-127 3-100 (330)
61 4ew6_A D-galactose-1-dehydroge 98.1 4.3E-06 1.5E-10 73.8 5.8 90 1-127 23-114 (330)
62 2ixa_A Alpha-N-acetylgalactosa 98.0 9E-06 3.1E-10 74.4 8.1 104 1-127 18-124 (444)
63 3e82_A Putative oxidoreductase 98.0 1.1E-05 3.6E-10 72.0 7.6 92 3-126 7-99 (364)
64 3mz0_A Inositol 2-dehydrogenas 98.0 1.2E-05 4.1E-10 70.8 7.6 98 2-127 1-99 (344)
65 3m2t_A Probable dehydrogenase; 98.0 1.3E-05 4.5E-10 71.3 7.9 98 1-127 3-101 (359)
66 3qy9_A DHPR, dihydrodipicolina 98.0 8.8E-06 3E-10 69.7 6.2 36 1-37 1-36 (243)
67 3i23_A Oxidoreductase, GFO/IDH 98.0 1.4E-05 4.6E-10 70.8 7.4 97 2-127 1-98 (349)
68 3ing_A Homoserine dehydrogenas 98.0 1.4E-05 4.8E-10 71.2 7.4 37 1-37 2-44 (325)
69 4f3y_A DHPR, dihydrodipicolina 98.0 2.1E-06 7.1E-11 74.8 1.8 170 1-209 5-184 (272)
70 1tlt_A Putative oxidoreductase 97.9 1.1E-05 3.9E-10 70.1 6.4 95 1-127 3-98 (319)
71 3rc1_A Sugar 3-ketoreductase; 97.9 1.3E-05 4.3E-10 71.1 6.8 97 1-127 25-122 (350)
72 3uuw_A Putative oxidoreductase 97.9 1.8E-05 6E-10 68.6 7.5 95 1-127 4-99 (308)
73 4had_A Probable oxidoreductase 97.9 1.6E-05 5.6E-10 69.8 7.1 96 3-127 23-119 (350)
74 3cea_A MYO-inositol 2-dehydrog 97.9 1.8E-05 6.3E-10 69.3 7.4 97 2-127 7-104 (346)
75 3f4l_A Putative oxidoreductase 97.9 1.8E-05 6.2E-10 69.7 7.2 95 3-127 2-98 (345)
76 2ho3_A Oxidoreductase, GFO/IDH 97.9 2.7E-05 9.2E-10 67.9 8.1 94 4-127 2-95 (325)
77 3ohs_X Trans-1,2-dihydrobenzen 97.9 2.1E-05 7.2E-10 68.9 7.3 97 2-127 1-99 (334)
78 3ijp_A DHPR, dihydrodipicolina 97.9 6.2E-06 2.1E-10 72.5 3.8 169 2-208 20-198 (288)
79 1dih_A Dihydrodipicolinate red 97.9 2.2E-05 7.6E-10 68.1 7.2 101 1-126 3-104 (273)
80 4gqa_A NAD binding oxidoreduct 97.9 1E-05 3.4E-10 73.0 5.1 96 3-127 26-129 (412)
81 2ejw_A HDH, homoserine dehydro 97.9 2.4E-05 8.3E-10 69.8 7.4 88 1-125 1-97 (332)
82 1h6d_A Precursor form of gluco 97.9 3.9E-05 1.3E-09 70.2 9.0 102 1-127 81-183 (433)
83 1ydw_A AX110P-like protein; st 97.9 2.3E-05 7.8E-10 69.5 7.2 100 2-127 5-104 (362)
84 3q2i_A Dehydrogenase; rossmann 97.8 4.2E-05 1.4E-09 67.6 8.4 95 3-127 13-108 (354)
85 3c1a_A Putative oxidoreductase 97.8 2.2E-05 7.4E-10 68.3 6.1 93 3-127 10-102 (315)
86 3mtj_A Homoserine dehydrogenas 97.8 3.6E-05 1.2E-09 71.3 7.3 93 2-126 9-111 (444)
87 1lc0_A Biliverdin reductase A; 97.8 3.3E-05 1.1E-09 67.0 6.5 90 2-127 6-98 (294)
88 3c8m_A Homoserine dehydrogenas 97.7 1.1E-05 3.8E-10 71.7 2.8 37 1-37 4-47 (331)
89 2dc1_A L-aspartate dehydrogena 97.7 7.1E-05 2.4E-09 62.6 7.4 134 4-183 1-136 (236)
90 3u3x_A Oxidoreductase; structu 97.7 4.3E-05 1.5E-09 68.0 5.9 97 1-127 24-121 (361)
91 1zh8_A Oxidoreductase; TM0312, 97.7 7.9E-05 2.7E-09 65.6 7.3 96 3-127 18-115 (340)
92 1xea_A Oxidoreductase, GFO/IDH 97.7 0.00015 5E-09 63.2 8.8 95 2-127 1-96 (323)
93 3moi_A Probable dehydrogenase; 97.7 4.9E-05 1.7E-09 68.2 5.8 95 3-127 2-97 (387)
94 3upl_A Oxidoreductase; rossman 97.7 8.2E-05 2.8E-09 69.0 7.4 110 2-122 22-136 (446)
95 2p2s_A Putative oxidoreductase 97.6 0.00013 4.3E-09 63.9 7.6 97 1-127 2-99 (336)
96 3dty_A Oxidoreductase, GFO/IDH 97.6 8E-05 2.7E-09 67.0 5.9 105 1-127 10-118 (398)
97 3v5n_A Oxidoreductase; structu 97.6 0.00012 4.2E-09 66.4 7.1 100 1-127 35-143 (417)
98 3o9z_A Lipopolysaccaride biosy 97.5 0.00016 5.4E-09 63.3 7.3 95 3-127 3-105 (312)
99 3do5_A HOM, homoserine dehydro 97.5 0.00017 5.9E-09 64.1 7.4 35 3-37 2-44 (327)
100 3btv_A Galactose/lactose metab 97.5 6.1E-05 2.1E-09 68.9 4.2 99 3-127 20-128 (438)
101 1p9l_A Dihydrodipicolinate red 97.5 0.00045 1.6E-08 59.0 9.4 34 4-37 1-35 (245)
102 2nvw_A Galactose/lactose metab 97.5 0.00012 4.2E-09 67.9 6.1 101 1-127 37-147 (479)
103 3oa2_A WBPB; oxidoreductase, s 97.5 0.00023 7.9E-09 62.4 7.3 95 3-127 3-106 (318)
104 2glx_A 1,5-anhydro-D-fructose 97.4 0.00028 9.6E-09 61.3 7.2 94 4-127 1-95 (332)
105 3ip3_A Oxidoreductase, putativ 97.4 4.8E-05 1.6E-09 66.8 2.0 98 2-127 1-100 (337)
106 3ic5_A Putative saccharopine d 97.2 0.00062 2.1E-08 49.4 5.7 96 3-124 5-100 (118)
107 1j5p_A Aspartate dehydrogenase 97.1 0.00064 2.2E-08 58.6 6.0 134 4-185 13-148 (253)
108 3oqb_A Oxidoreductase; structu 97.1 0.00043 1.5E-08 61.6 4.5 98 1-127 4-116 (383)
109 1r0k_A 1-deoxy-D-xylulose 5-ph 96.9 0.00071 2.4E-08 61.7 4.2 110 3-125 4-123 (388)
110 2dt5_A AT-rich DNA-binding pro 96.8 0.0011 3.8E-08 55.4 4.9 94 3-127 80-174 (211)
111 2vt3_A REX, redox-sensing tran 96.8 0.0033 1.1E-07 52.6 7.3 94 3-127 85-179 (215)
112 4gmf_A Yersiniabactin biosynth 96.3 0.0094 3.2E-07 53.6 7.9 135 3-172 7-177 (372)
113 3keo_A Redox-sensing transcrip 96.3 0.0033 1.1E-07 52.7 4.4 96 3-126 84-181 (212)
114 3ggo_A Prephenate dehydrogenas 96.2 0.017 5.8E-07 50.5 8.7 92 3-127 33-129 (314)
115 1ebf_A Homoserine dehydrogenas 96.0 0.0057 2E-07 54.8 4.7 35 2-36 3-40 (358)
116 3a06_A 1-deoxy-D-xylulose 5-ph 95.8 0.023 7.7E-07 51.5 7.6 112 1-125 1-116 (376)
117 4huj_A Uncharacterized protein 95.6 0.0099 3.4E-07 48.9 4.1 35 1-36 21-55 (220)
118 3abi_A Putative uncharacterize 95.5 0.0084 2.9E-07 53.1 3.5 93 3-126 16-108 (365)
119 1y81_A Conserved hypothetical 95.3 0.089 3.1E-06 40.5 8.6 85 3-126 14-102 (138)
120 2nu8_A Succinyl-COA ligase [AD 95.3 0.035 1.2E-06 48.1 6.8 89 3-125 7-97 (288)
121 2bma_A Glutamate dehydrogenase 94.0 0.17 6E-06 47.0 8.6 103 4-123 253-365 (470)
122 2duw_A Putative COA-binding pr 94.0 0.19 6.6E-06 38.8 7.6 86 3-125 13-102 (145)
123 3b1f_A Putative prephenate deh 93.9 0.045 1.5E-06 46.3 4.1 35 1-36 4-39 (290)
124 3evt_A Phosphoglycerate dehydr 93.8 0.076 2.6E-06 46.9 5.4 31 4-35 138-168 (324)
125 2d59_A Hypothetical protein PH 93.4 0.36 1.2E-05 37.1 8.1 84 3-125 22-109 (144)
126 1vm6_A DHPR, dihydrodipicolina 93.4 0.15 5.3E-06 43.0 6.4 32 4-36 13-45 (228)
127 3hg7_A D-isomer specific 2-hyd 93.3 0.092 3.2E-06 46.4 5.1 31 4-35 141-171 (324)
128 1iuk_A Hypothetical protein TT 93.0 0.27 9.1E-06 37.9 6.8 87 4-127 14-104 (140)
129 3kb6_A D-lactate dehydrogenase 93.0 0.16 5.5E-06 44.9 6.2 32 4-37 142-173 (334)
130 4g2n_A D-isomer specific 2-hyd 92.9 0.097 3.3E-06 46.6 4.7 30 4-34 174-203 (345)
131 1qyd_A Pinoresinol-lariciresin 92.8 0.13 4.5E-06 43.2 5.3 32 3-35 4-36 (313)
132 2i76_A Hypothetical protein; N 92.8 0.027 9.3E-07 47.8 0.9 33 1-36 1-33 (276)
133 2ew2_A 2-dehydropantoate 2-red 92.8 0.1 3.6E-06 43.9 4.6 33 1-34 1-33 (316)
134 2pi1_A D-lactate dehydrogenase 92.8 0.1 3.4E-06 46.2 4.6 30 4-34 142-171 (334)
135 3mog_A Probable 3-hydroxybutyr 92.8 0.27 9.3E-06 45.6 7.7 39 3-45 5-43 (483)
136 2rcy_A Pyrroline carboxylate r 92.7 0.076 2.6E-06 44.0 3.6 26 1-26 2-27 (262)
137 3pp8_A Glyoxylate/hydroxypyruv 92.7 0.095 3.2E-06 46.0 4.3 31 4-35 140-170 (315)
138 1oi7_A Succinyl-COA synthetase 92.7 0.18 6.2E-06 43.6 6.0 87 3-123 7-94 (288)
139 3tri_A Pyrroline-5-carboxylate 92.6 0.095 3.3E-06 44.7 4.1 36 1-36 1-37 (280)
140 1id1_A Putative potassium chan 92.6 0.12 4.2E-06 39.4 4.3 34 1-35 1-34 (153)
141 1qp8_A Formate dehydrogenase; 92.5 0.11 3.9E-06 45.2 4.5 30 4-34 125-154 (303)
142 1xdw_A NAD+-dependent (R)-2-hy 92.5 0.12 4E-06 45.5 4.6 30 4-34 147-176 (331)
143 2ahr_A Putative pyrroline carb 92.5 0.15 5.2E-06 42.2 5.1 31 4-36 4-34 (259)
144 1dxy_A D-2-hydroxyisocaproate 92.4 0.12 4.1E-06 45.5 4.6 30 4-34 146-175 (333)
145 3gg9_A D-3-phosphoglycerate de 92.4 0.12 4.1E-06 46.1 4.6 30 4-34 161-190 (352)
146 2yq5_A D-isomer specific 2-hyd 92.4 0.12 4.2E-06 45.9 4.6 30 4-34 149-178 (343)
147 1bg6_A N-(1-D-carboxylethyl)-L 92.4 0.13 4.5E-06 44.4 4.7 31 2-33 3-33 (359)
148 2g76_A 3-PGDH, D-3-phosphoglyc 92.3 0.13 4.6E-06 45.4 4.7 30 4-34 166-195 (335)
149 3llv_A Exopolyphosphatase-rela 92.3 0.12 4.3E-06 38.6 4.0 31 4-35 7-37 (141)
150 4e21_A 6-phosphogluconate dehy 92.3 0.13 4.5E-06 45.8 4.7 32 3-36 22-53 (358)
151 1gtm_A Glutamate dehydrogenase 92.2 0.15 5.1E-06 46.6 5.1 33 4-37 213-246 (419)
152 4dgs_A Dehydrogenase; structur 92.2 0.14 4.8E-06 45.5 4.7 29 4-33 172-200 (340)
153 1gdh_A D-glycerate dehydrogena 92.2 0.14 4.9E-06 44.8 4.7 30 4-34 147-176 (320)
154 1mx3_A CTBP1, C-terminal bindi 92.1 0.14 4.9E-06 45.5 4.7 32 4-37 169-200 (347)
155 3gvx_A Glycerate dehydrogenase 92.1 0.11 3.8E-06 45.1 3.9 30 4-34 123-152 (290)
156 4e5n_A Thermostable phosphite 92.1 0.11 3.8E-06 45.8 3.9 32 4-37 146-177 (330)
157 3jtm_A Formate dehydrogenase, 92.0 0.13 4.5E-06 45.9 4.4 30 4-34 165-194 (351)
158 3d1l_A Putative NADP oxidoredu 92.0 0.13 4.5E-06 42.8 4.2 32 4-36 11-42 (266)
159 4hy3_A Phosphoglycerate oxidor 92.0 0.14 4.6E-06 46.1 4.4 32 4-37 177-208 (365)
160 2cuk_A Glycerate dehydrogenase 91.8 0.16 5.4E-06 44.3 4.6 30 4-34 145-174 (311)
161 1lld_A L-lactate dehydrogenase 91.8 0.17 5.8E-06 43.3 4.8 33 3-36 7-40 (319)
162 3fwz_A Inner membrane protein 91.8 0.17 5.8E-06 38.2 4.2 32 3-35 7-38 (140)
163 3gt0_A Pyrroline-5-carboxylate 91.7 0.15 5.1E-06 42.2 4.2 34 1-36 1-37 (247)
164 3e48_A Putative nucleoside-dip 91.7 0.18 6.3E-06 41.9 4.7 31 5-35 2-33 (289)
165 1wwk_A Phosphoglycerate dehydr 91.7 0.17 5.8E-06 44.0 4.6 30 4-34 143-172 (307)
166 1j4a_A D-LDH, D-lactate dehydr 91.7 0.17 5.7E-06 44.6 4.6 30 4-34 147-176 (333)
167 3dqp_A Oxidoreductase YLBE; al 91.6 0.47 1.6E-05 37.8 6.9 30 5-35 2-32 (219)
168 1sc6_A PGDH, D-3-phosphoglycer 91.6 0.17 5.8E-06 45.9 4.6 29 4-33 146-174 (404)
169 2ekl_A D-3-phosphoglycerate de 91.5 0.18 6.1E-06 44.0 4.6 31 4-36 143-173 (313)
170 3cky_A 2-hydroxymethyl glutara 91.5 0.18 6.2E-06 42.6 4.5 32 3-36 4-35 (301)
171 3oet_A Erythronate-4-phosphate 91.4 0.18 6.1E-06 45.6 4.6 29 4-33 120-148 (381)
172 2o4c_A Erythronate-4-phosphate 91.4 0.18 6.3E-06 45.5 4.6 31 4-36 117-147 (380)
173 4gbj_A 6-phosphogluconate dehy 91.3 0.16 5.6E-06 43.8 4.1 32 3-36 5-36 (297)
174 1lss_A TRK system potassium up 91.3 0.27 9.2E-06 36.0 4.8 30 4-34 5-34 (140)
175 2w2k_A D-mandelate dehydrogena 91.3 0.2 7E-06 44.3 4.8 31 4-36 164-195 (348)
176 1vpd_A Tartronate semialdehyde 91.2 0.19 6.5E-06 42.4 4.4 31 4-36 6-36 (299)
177 3c24_A Putative oxidoreductase 91.2 0.23 7.8E-06 42.0 4.8 31 4-36 12-43 (286)
178 3ego_A Probable 2-dehydropanto 91.0 1.4 4.7E-05 37.8 9.7 30 3-34 2-31 (307)
179 3g0o_A 3-hydroxyisobutyrate de 90.9 0.24 8.2E-06 42.3 4.7 32 3-36 7-38 (303)
180 2x0j_A Malate dehydrogenase; o 90.8 0.22 7.5E-06 43.4 4.4 34 4-37 1-34 (294)
181 2nac_A NAD-dependent formate d 90.7 0.21 7.1E-06 45.3 4.4 30 4-34 192-221 (393)
182 3dtt_A NADP oxidoreductase; st 90.7 0.29 9.8E-06 40.6 4.9 30 3-33 19-48 (245)
183 3ba1_A HPPR, hydroxyphenylpyru 90.7 0.2 6.9E-06 44.2 4.1 29 4-33 165-193 (333)
184 3doj_A AT3G25530, dehydrogenas 90.6 0.28 9.7E-06 42.1 5.0 32 3-36 21-52 (310)
185 2gcg_A Glyoxylate reductase/hy 90.6 0.22 7.4E-06 43.6 4.2 30 4-34 156-185 (330)
186 2cvz_A Dehydrogenase, 3-hydrox 90.6 0.19 6.6E-06 42.0 3.8 30 4-36 2-31 (289)
187 2d0i_A Dehydrogenase; structur 90.5 0.23 7.9E-06 43.6 4.4 32 4-37 147-178 (333)
188 2wtb_A MFP2, fatty acid multif 90.4 0.35 1.2E-05 47.0 5.9 31 4-36 313-343 (725)
189 4ezb_A Uncharacterized conserv 90.4 0.31 1.1E-05 42.2 5.1 33 3-36 24-56 (317)
190 3ff4_A Uncharacterized protein 90.4 1.1 3.9E-05 33.8 7.7 83 4-126 5-91 (122)
191 2dbq_A Glyoxylate reductase; D 90.4 0.26 9E-06 43.2 4.6 31 4-36 151-181 (334)
192 3nkl_A UDP-D-quinovosamine 4-d 90.4 0.41 1.4E-05 35.7 5.2 34 3-36 4-37 (141)
193 2izz_A Pyrroline-5-carboxylate 90.4 0.22 7.4E-06 43.2 4.0 33 3-36 22-57 (322)
194 4e12_A Diketoreductase; oxidor 90.3 0.32 1.1E-05 41.2 5.0 34 1-36 1-35 (283)
195 3l6d_A Putative oxidoreductase 90.3 0.24 8.3E-06 42.5 4.2 32 3-36 9-40 (306)
196 1ldn_A L-lactate dehydrogenase 90.2 0.16 5.4E-06 44.2 3.1 34 3-36 6-39 (316)
197 3e8x_A Putative NAD-dependent 90.2 2.2 7.6E-05 34.1 9.9 32 3-35 21-53 (236)
198 3aog_A Glutamate dehydrogenase 90.1 0.91 3.1E-05 41.8 8.1 34 3-37 235-268 (440)
199 2vns_A Metalloreductase steap3 90.1 0.27 9.3E-06 40.0 4.2 30 3-33 28-57 (215)
200 3r3j_A Glutamate dehydrogenase 90.0 0.85 2.9E-05 42.2 7.8 103 4-123 240-352 (456)
201 3qha_A Putative oxidoreductase 90.0 0.21 7.2E-06 42.7 3.6 32 3-36 15-46 (296)
202 3k5p_A D-3-phosphoglycerate de 90.0 0.29 9.8E-06 44.8 4.6 30 4-34 157-186 (416)
203 4dll_A 2-hydroxy-3-oxopropiona 90.0 0.31 1.1E-05 42.1 4.7 31 4-36 32-62 (320)
204 1bgv_A Glutamate dehydrogenase 90.0 0.65 2.2E-05 42.9 7.1 103 4-124 231-344 (449)
205 3obb_A Probable 3-hydroxyisobu 89.8 0.31 1.1E-05 42.2 4.6 31 4-36 4-34 (300)
206 2iz1_A 6-phosphogluconate dehy 89.8 0.26 9E-06 45.3 4.3 34 1-36 3-36 (474)
207 2j6i_A Formate dehydrogenase; 89.7 0.25 8.6E-06 44.1 4.0 30 4-34 165-195 (364)
208 2g5c_A Prephenate dehydrogenas 89.7 0.4 1.4E-05 40.2 5.0 32 4-36 2-34 (281)
209 2h78_A Hibadh, 3-hydroxyisobut 89.7 0.32 1.1E-05 41.3 4.4 31 4-36 4-34 (302)
210 1evy_A Glycerol-3-phosphate de 89.5 0.29 9.9E-06 42.8 4.2 33 1-34 12-45 (366)
211 2yv1_A Succinyl-COA ligase [AD 89.4 0.59 2E-05 40.4 6.0 88 4-125 14-103 (294)
212 3qsg_A NAD-binding phosphogluc 89.4 0.28 9.4E-06 42.4 3.9 32 3-36 24-56 (312)
213 1yb4_A Tartronic semialdehyde 89.4 0.25 8.4E-06 41.5 3.5 30 4-34 4-33 (295)
214 3d4o_A Dipicolinate synthase s 89.4 0.39 1.3E-05 41.0 4.8 30 4-34 156-185 (293)
215 2uyy_A N-PAC protein; long-cha 89.3 0.33 1.1E-05 41.4 4.3 32 3-36 30-61 (316)
216 2o3j_A UDP-glucose 6-dehydroge 89.3 0.29 1E-05 45.1 4.2 33 2-34 8-41 (481)
217 2hmt_A YUAA protein; RCK, KTN, 89.2 0.31 1E-05 35.8 3.5 30 4-34 7-36 (144)
218 3gpi_A NAD-dependent epimerase 89.2 0.36 1.2E-05 40.1 4.4 34 1-35 1-34 (286)
219 2q3e_A UDP-glucose 6-dehydroge 89.1 0.31 1.1E-05 44.6 4.2 35 1-36 2-38 (467)
220 2rir_A Dipicolinate synthase, 89.0 0.43 1.5E-05 40.8 4.8 30 4-34 158-187 (300)
221 2g1u_A Hypothetical protein TM 88.8 0.61 2.1E-05 35.6 5.1 30 4-34 20-49 (155)
222 4gwg_A 6-phosphogluconate dehy 88.8 0.33 1.1E-05 45.2 4.1 34 1-36 2-35 (484)
223 2yv2_A Succinyl-COA synthetase 88.8 0.83 2.8E-05 39.5 6.5 89 3-125 13-104 (297)
224 3ghy_A Ketopantoate reductase 88.7 0.37 1.3E-05 41.8 4.2 33 1-34 1-33 (335)
225 3slg_A PBGP3 protein; structur 88.6 0.4 1.4E-05 41.3 4.4 35 1-35 22-57 (372)
226 3pef_A 6-phosphogluconate dehy 88.6 0.46 1.6E-05 40.1 4.6 31 4-36 2-32 (287)
227 3jv7_A ADH-A; dehydrogenase, n 88.5 1.2 4.1E-05 38.4 7.4 136 4-169 173-311 (345)
228 2zyd_A 6-phosphogluconate dehy 88.4 0.36 1.2E-05 44.6 4.1 33 1-34 13-45 (480)
229 3pdu_A 3-hydroxyisobutyrate de 88.3 0.29 1E-05 41.3 3.2 31 4-36 2-32 (287)
230 3mw9_A GDH 1, glutamate dehydr 88.2 3.5 0.00012 38.5 10.6 33 4-37 245-277 (501)
231 1v9l_A Glutamate dehydrogenase 88.1 1.6 5.5E-05 39.9 8.2 33 4-37 211-243 (421)
232 1i36_A Conserved hypothetical 88.1 0.52 1.8E-05 39.0 4.6 30 5-36 2-31 (264)
233 3c85_A Putative glutathione-re 88.1 0.4 1.4E-05 37.5 3.7 32 4-35 40-71 (183)
234 3l4b_C TRKA K+ channel protien 88.0 0.36 1.2E-05 39.0 3.5 31 4-35 1-31 (218)
235 3oj0_A Glutr, glutamyl-tRNA re 87.9 0.28 9.5E-06 37.1 2.5 31 4-36 22-52 (144)
236 1ygy_A PGDH, D-3-phosphoglycer 87.8 0.5 1.7E-05 44.1 4.7 33 4-38 143-175 (529)
237 3ius_A Uncharacterized conserv 87.7 0.59 2E-05 38.6 4.7 32 3-35 5-36 (286)
238 2yfq_A Padgh, NAD-GDH, NAD-spe 87.5 0.8 2.7E-05 41.9 5.8 34 3-37 212-245 (421)
239 3ldh_A Lactate dehydrogenase; 87.3 1.3 4.6E-05 39.0 7.0 140 4-173 22-182 (330)
240 2f1k_A Prephenate dehydrogenas 87.3 0.64 2.2E-05 38.7 4.7 31 4-36 1-31 (279)
241 2raf_A Putative dinucleotide-b 87.2 0.66 2.3E-05 37.5 4.6 30 3-33 19-48 (209)
242 3qvo_A NMRA family protein; st 87.1 0.71 2.4E-05 37.4 4.8 35 1-35 21-56 (236)
243 3k92_A NAD-GDH, NAD-specific g 87.1 1.4 4.8E-05 40.4 7.2 33 4-37 222-254 (424)
244 3gg2_A Sugar dehydrogenase, UD 87.1 0.59 2E-05 42.7 4.7 40 1-45 1-40 (450)
245 1ur5_A Malate dehydrogenase; o 87.0 0.85 2.9E-05 39.4 5.5 35 1-37 1-35 (309)
246 3fpc_A NADP-dependent alcohol 86.9 2 6.8E-05 37.1 7.8 97 4-123 168-265 (352)
247 1yqg_A Pyrroline-5-carboxylate 86.8 0.71 2.4E-05 38.0 4.7 32 4-36 1-32 (263)
248 4fcc_A Glutamate dehydrogenase 86.7 1 3.5E-05 41.6 6.1 100 4-120 236-345 (450)
249 2gf2_A Hibadh, 3-hydroxyisobut 86.3 0.54 1.8E-05 39.5 3.7 30 5-36 2-31 (296)
250 3two_A Mannitol dehydrogenase; 86.1 1.8 6.1E-05 37.4 7.1 129 4-169 178-309 (348)
251 3dfu_A Uncharacterized protein 86.0 0.29 1E-05 41.2 1.9 33 3-36 6-38 (232)
252 1jay_A Coenzyme F420H2:NADP+ o 85.9 0.95 3.3E-05 36.0 4.9 30 4-34 1-31 (212)
253 1x0v_A GPD-C, GPDH-C, glycerol 85.8 0.49 1.7E-05 40.9 3.3 25 1-25 6-30 (354)
254 3c7a_A Octopine dehydrogenase; 85.7 0.74 2.5E-05 40.8 4.5 33 1-34 1-33 (404)
255 3d64_A Adenosylhomocysteinase; 85.6 0.78 2.7E-05 42.8 4.7 31 4-36 278-308 (494)
256 1ks9_A KPA reductase;, 2-dehyd 85.5 0.88 3E-05 37.7 4.6 30 4-34 1-30 (291)
257 2i99_A MU-crystallin homolog; 85.3 0.89 3E-05 39.3 4.7 33 4-36 136-168 (312)
258 2pv7_A T-protein [includes: ch 85.2 0.8 2.7E-05 39.1 4.3 29 4-33 22-51 (298)
259 2dq4_A L-threonine 3-dehydroge 85.0 3.1 0.0001 35.8 8.1 135 5-169 167-305 (343)
260 1c1d_A L-phenylalanine dehydro 85.0 0.94 3.2E-05 40.5 4.8 32 4-37 176-207 (355)
261 2yjz_A Metalloreductase steap4 85.3 0.17 6E-06 41.1 0.0 29 3-32 19-47 (201)
262 1hdo_A Biliverdin IX beta redu 85.0 1.3 4.4E-05 34.3 5.1 34 1-35 1-35 (206)
263 1leh_A Leucine dehydrogenase; 84.9 1.2 4E-05 39.9 5.4 35 4-42 174-208 (364)
264 1z82_A Glycerol-3-phosphate de 84.8 0.97 3.3E-05 39.0 4.7 32 2-34 13-44 (335)
265 3zwc_A Peroxisomal bifunctiona 84.7 1.2 4E-05 43.6 5.7 145 4-171 317-486 (742)
266 1f0y_A HCDH, L-3-hydroxyacyl-C 84.7 1.1 3.8E-05 38.0 5.0 32 3-36 15-46 (302)
267 3g79_A NDP-N-acetyl-D-galactos 84.6 0.96 3.3E-05 41.9 4.8 32 3-34 18-50 (478)
268 2qyt_A 2-dehydropantoate 2-red 84.6 0.64 2.2E-05 39.2 3.4 32 3-34 8-44 (317)
269 3r6d_A NAD-dependent epimerase 84.3 1.1 3.8E-05 35.6 4.6 34 2-35 4-38 (221)
270 2dpo_A L-gulonate 3-dehydrogen 84.1 0.95 3.3E-05 39.5 4.3 40 3-46 6-45 (319)
271 1v8b_A Adenosylhomocysteinase; 84.1 0.77 2.6E-05 42.7 3.9 31 4-36 258-288 (479)
272 3d0o_A L-LDH 1, L-lactate dehy 84.0 0.98 3.4E-05 39.2 4.4 35 2-36 5-39 (317)
273 3ktd_A Prephenate dehydrogenas 83.8 0.92 3.1E-05 40.1 4.2 36 4-43 9-44 (341)
274 3dfz_A SIRC, precorrin-2 dehyd 83.5 3.8 0.00013 34.1 7.6 30 4-34 32-61 (223)
275 1np3_A Ketol-acid reductoisome 83.3 0.98 3.4E-05 39.4 4.1 31 4-36 17-47 (338)
276 3h9u_A Adenosylhomocysteinase; 83.0 1.2 4E-05 41.0 4.6 31 4-36 212-242 (436)
277 4ina_A Saccharopine dehydrogen 82.7 1.2 4.1E-05 39.9 4.5 153 4-177 2-167 (405)
278 3i83_A 2-dehydropantoate 2-red 82.6 1.4 4.6E-05 37.9 4.7 32 3-35 2-33 (320)
279 3n58_A Adenosylhomocysteinase; 82.5 1.3 4.3E-05 41.1 4.6 29 4-33 248-276 (464)
280 3pid_A UDP-glucose 6-dehydroge 82.4 1.4 4.6E-05 40.4 4.8 39 3-46 36-74 (432)
281 3dhn_A NAD-dependent epimerase 82.3 1.3 4.5E-05 35.1 4.2 32 3-35 4-36 (227)
282 2tmg_A Protein (glutamate dehy 82.3 1.8 6E-05 39.5 5.5 35 3-37 209-243 (415)
283 2ewd_A Lactate dehydrogenase,; 82.2 1.6 5.4E-05 37.6 5.0 36 1-37 1-37 (317)
284 1xq6_A Unknown protein; struct 82.0 2 6.9E-05 34.2 5.3 35 1-35 2-38 (253)
285 1t2d_A LDH-P, L-lactate dehydr 81.8 2 6.9E-05 37.4 5.5 36 1-37 1-37 (322)
286 4dvj_A Putative zinc-dependent 81.6 1 3.4E-05 39.5 3.5 92 4-119 173-265 (363)
287 1zej_A HBD-9, 3-hydroxyacyl-CO 81.5 1.6 5.4E-05 37.8 4.7 74 4-106 13-86 (293)
288 1yqd_A Sinapyl alcohol dehydro 81.5 1.5 5.2E-05 38.3 4.7 133 4-168 189-322 (366)
289 3l9w_A Glutathione-regulated p 81.3 1.2 4E-05 40.3 4.0 36 4-43 5-40 (413)
290 1omo_A Alanine dehydrogenase; 81.2 1.6 5.6E-05 37.9 4.7 33 4-36 126-158 (322)
291 2hun_A 336AA long hypothetical 81.0 1.5 5.1E-05 36.9 4.3 35 1-35 1-37 (336)
292 1txg_A Glycerol-3-phosphate de 81.0 1.3 4.5E-05 37.6 4.0 30 4-34 1-30 (335)
293 3i6i_A Putative leucoanthocyan 80.9 1.4 4.8E-05 37.6 4.1 35 1-36 8-43 (346)
294 3m2p_A UDP-N-acetylglucosamine 80.7 1.9 6.6E-05 36.0 4.9 33 1-35 1-34 (311)
295 2pgd_A 6-phosphogluconate dehy 80.5 1.3 4.4E-05 40.7 4.0 31 4-36 3-33 (482)
296 3p7m_A Malate dehydrogenase; p 80.4 2.6 8.8E-05 36.8 5.7 35 1-36 3-37 (321)
297 2d8a_A PH0655, probable L-thre 80.3 5.9 0.0002 34.0 8.0 138 4-169 169-310 (348)
298 1pgj_A 6PGDH, 6-PGDH, 6-phosph 80.2 1.3 4.5E-05 40.7 3.9 31 4-36 2-32 (478)
299 2hjr_A Malate dehydrogenase; m 80.1 2.5 8.7E-05 36.8 5.6 34 3-37 14-47 (328)
300 3ip1_A Alcohol dehydrogenase, 79.8 5.9 0.0002 34.9 8.0 30 4-34 215-245 (404)
301 1piw_A Hypothetical zinc-type 79.6 4.5 0.00015 35.0 7.0 132 4-169 181-317 (360)
302 2p4q_A 6-phosphogluconate dehy 79.4 1.5 5.1E-05 40.6 4.1 31 3-34 10-40 (497)
303 3hn2_A 2-dehydropantoate 2-red 78.9 1.5 5.1E-05 37.5 3.7 32 1-34 1-32 (312)
304 1mv8_A GMD, GDP-mannose 6-dehy 78.8 1.8 6.2E-05 39.0 4.4 36 4-43 1-36 (436)
305 4g65_A TRK system potassium up 78.8 1.9 6.4E-05 39.5 4.5 40 3-46 3-42 (461)
306 1zcj_A Peroxisomal bifunctiona 78.6 2.3 8E-05 38.8 5.1 32 3-36 37-68 (463)
307 1e6u_A GDP-fucose synthetase; 78.6 1.9 6.4E-05 36.0 4.2 33 1-34 1-34 (321)
308 1dlj_A UDP-glucose dehydrogena 78.5 1.9 6.3E-05 38.6 4.3 29 4-34 1-29 (402)
309 2d5c_A AROE, shikimate 5-dehyd 78.5 1.8 6.3E-05 36.0 4.0 30 5-36 118-147 (263)
310 3q2o_A Phosphoribosylaminoimid 78.5 2.5 8.6E-05 37.1 5.1 30 4-34 15-44 (389)
311 2axq_A Saccharopine dehydrogen 78.5 2.1 7.1E-05 39.4 4.7 32 3-34 23-54 (467)
312 3g17_A Similar to 2-dehydropan 78.4 1.1 3.8E-05 38.0 2.7 31 1-33 1-31 (294)
313 4ej6_A Putative zinc-binding d 78.4 5.5 0.00019 34.8 7.3 29 4-33 184-213 (370)
314 3gvp_A Adenosylhomocysteinase 78.3 2.1 7.2E-05 39.3 4.6 31 4-36 221-251 (435)
315 3ew7_A LMO0794 protein; Q8Y8U8 78.2 2.7 9.2E-05 32.8 4.8 31 4-35 1-32 (221)
316 3k96_A Glycerol-3-phosphate de 78.2 2.1 7.1E-05 37.8 4.4 30 3-33 29-58 (356)
317 1yj8_A Glycerol-3-phosphate de 78.1 1.2 4.1E-05 39.1 2.9 22 4-25 22-43 (375)
318 3goh_A Alcohol dehydrogenase, 77.8 2.4 8.3E-05 35.9 4.7 30 4-34 144-173 (315)
319 3k5i_A Phosphoribosyl-aminoimi 77.6 3 0.0001 37.0 5.4 33 3-36 24-56 (403)
320 1ff9_A Saccharopine reductase; 77.4 2.4 8.4E-05 38.6 4.8 33 1-34 1-33 (450)
321 2a35_A Hypothetical protein PA 77.4 2.2 7.6E-05 33.2 4.0 32 3-34 5-38 (215)
322 3uog_A Alcohol dehydrogenase; 77.3 4.5 0.00015 35.1 6.4 151 4-184 191-342 (363)
323 3h2s_A Putative NADH-flavin re 77.2 3 0.0001 32.8 4.8 30 5-35 2-32 (224)
324 4b4o_A Epimerase family protei 76.6 2.9 0.0001 34.7 4.8 30 4-34 1-31 (298)
325 3orq_A N5-carboxyaminoimidazol 76.2 3.2 0.00011 36.4 5.1 30 4-34 13-42 (377)
326 1qyc_A Phenylcoumaran benzylic 76.1 2.2 7.7E-05 35.3 3.9 32 3-35 4-36 (308)
327 3mwd_B ATP-citrate synthase; A 76.1 6.7 0.00023 34.6 7.1 35 3-37 10-47 (334)
328 3ruf_A WBGU; rossmann fold, UD 75.3 2.8 9.7E-05 35.5 4.4 33 2-35 24-57 (351)
329 3gvi_A Malate dehydrogenase; N 75.1 3.5 0.00012 36.1 5.0 35 1-36 5-39 (324)
330 1hyh_A L-hicdh, L-2-hydroxyiso 74.9 3.3 0.00011 35.3 4.8 32 4-36 2-34 (309)
331 2ph5_A Homospermidine synthase 74.6 1.8 6.1E-05 40.3 3.1 98 4-126 14-114 (480)
332 4a2c_A Galactitol-1-phosphate 74.3 6.9 0.00024 33.3 6.6 93 4-118 162-254 (346)
333 3aoe_E Glutamate dehydrogenase 74.3 3.6 0.00012 37.6 5.0 34 3-37 218-251 (419)
334 3pqe_A L-LDH, L-lactate dehydr 74.2 2.9 0.0001 36.6 4.3 34 3-36 5-38 (326)
335 3m6i_A L-arabinitol 4-dehydrog 74.2 7.9 0.00027 33.3 7.1 30 4-34 181-211 (363)
336 2z2v_A Hypothetical protein PH 74.1 3.2 0.00011 36.7 4.5 92 4-126 17-108 (365)
337 1x7d_A Ornithine cyclodeaminas 74.1 3.1 0.00011 36.7 4.5 33 4-36 130-162 (350)
338 3ce6_A Adenosylhomocysteinase; 74.1 3.1 0.00011 38.7 4.6 31 4-36 275-305 (494)
339 1y6j_A L-lactate dehydrogenase 74.0 3.3 0.00011 35.9 4.5 34 3-36 7-40 (318)
340 1q0q_A 1-deoxy-D-xylulose 5-ph 73.8 4.4 0.00015 36.8 5.4 110 4-123 10-130 (406)
341 2hk9_A Shikimate dehydrogenase 73.7 2.9 9.9E-05 35.2 4.0 31 4-36 130-160 (275)
342 2b5w_A Glucose dehydrogenase; 73.7 8.9 0.00031 33.0 7.3 136 4-169 174-319 (357)
343 4egb_A DTDP-glucose 4,6-dehydr 73.7 3.1 0.0001 35.2 4.2 33 3-35 24-58 (346)
344 2wm3_A NMRA-like family domain 73.7 3.4 0.00012 34.3 4.4 33 3-35 5-38 (299)
345 3qwb_A Probable quinone oxidor 73.5 4.4 0.00015 34.6 5.2 31 4-35 150-181 (334)
346 3nep_X Malate dehydrogenase; h 73.2 3.4 0.00012 36.0 4.4 34 4-37 1-34 (314)
347 3k6j_A Protein F01G10.3, confi 73.2 3.9 0.00013 37.7 5.0 32 3-36 54-85 (460)
348 3s2e_A Zinc-containing alcohol 73.1 3.9 0.00013 35.0 4.7 136 4-169 168-304 (340)
349 1uuf_A YAHK, zinc-type alcohol 73.0 3.3 0.00011 36.2 4.3 134 4-169 196-330 (369)
350 2vhw_A Alanine dehydrogenase; 73.0 3.9 0.00013 36.2 4.8 31 4-36 169-199 (377)
351 3sc6_A DTDP-4-dehydrorhamnose 72.9 2.6 8.8E-05 34.6 3.5 31 3-34 5-36 (287)
352 3kkj_A Amine oxidase, flavin-c 72.9 3.6 0.00012 31.3 4.1 31 3-34 2-32 (336)
353 1oc2_A DTDP-glucose 4,6-dehydr 72.8 3.4 0.00012 34.8 4.3 33 3-35 4-38 (348)
354 3vps_A TUNA, NAD-dependent epi 72.8 3.7 0.00013 34.0 4.4 32 3-35 7-39 (321)
355 3h8v_A Ubiquitin-like modifier 72.6 2.2 7.4E-05 37.0 3.0 41 4-45 37-78 (292)
356 2y1e_A 1-deoxy-D-xylulose 5-ph 72.6 4.2 0.00014 36.9 4.9 42 4-45 22-65 (398)
357 4b8w_A GDP-L-fucose synthase; 72.5 3.1 0.00011 34.1 3.9 26 1-26 4-30 (319)
358 3uko_A Alcohol dehydrogenase c 72.4 3.2 0.00011 36.2 4.1 30 4-34 195-225 (378)
359 3au8_A 1-deoxy-D-xylulose 5-ph 72.4 3.8 0.00013 38.0 4.6 43 2-45 76-123 (488)
360 3fi9_A Malate dehydrogenase; s 72.3 3.7 0.00013 36.3 4.5 35 1-36 6-42 (343)
361 3jyn_A Quinone oxidoreductase; 71.8 3.5 0.00012 35.1 4.2 31 4-35 142-173 (325)
362 3fr7_A Putative ketol-acid red 71.7 3.6 0.00012 38.6 4.4 32 4-35 55-91 (525)
363 1y7t_A Malate dehydrogenase; N 71.5 4.2 0.00014 34.9 4.6 33 1-33 1-41 (327)
364 4g65_A TRK system potassium up 71.4 2.4 8.1E-05 38.8 3.1 94 4-124 236-332 (461)
365 2y0c_A BCEC, UDP-glucose dehyd 71.2 4 0.00014 37.4 4.6 31 3-34 8-38 (478)
366 3hdj_A Probable ornithine cycl 71.0 4.3 0.00015 35.2 4.6 34 4-37 122-155 (313)
367 2fp4_A Succinyl-COA ligase [GD 71.0 7.9 0.00027 33.4 6.2 86 4-123 14-101 (305)
368 3st7_A Capsular polysaccharide 70.8 3.5 0.00012 35.4 4.0 43 4-47 1-44 (369)
369 1ez4_A Lactate dehydrogenase; 70.6 3.9 0.00013 35.5 4.2 34 3-36 5-38 (318)
370 3tl2_A Malate dehydrogenase; c 70.5 5.5 0.00019 34.6 5.2 33 3-36 8-40 (315)
371 3eag_A UDP-N-acetylmuramate:L- 70.5 16 0.00054 31.3 8.1 86 4-118 5-91 (326)
372 1pzg_A LDH, lactate dehydrogen 70.4 5 0.00017 34.9 4.8 33 4-37 10-42 (331)
373 1xa0_A Putative NADPH dependen 70.3 8.4 0.00029 32.6 6.2 31 5-36 152-183 (328)
374 2r6j_A Eugenol synthase 1; phe 70.0 4.1 0.00014 34.0 4.1 31 4-35 12-43 (318)
375 1f8f_A Benzyl alcohol dehydrog 69.9 3.5 0.00012 35.8 3.8 30 4-34 192-222 (371)
376 2cf5_A Atccad5, CAD, cinnamyl 69.7 2.5 8.5E-05 36.7 2.7 31 4-35 182-212 (357)
377 1a5z_A L-lactate dehydrogenase 69.7 4.8 0.00016 34.7 4.5 32 4-36 1-33 (319)
378 2b69_A UDP-glucuronate decarbo 69.6 5.5 0.00019 33.6 4.9 32 3-35 27-59 (343)
379 2yy7_A L-threonine dehydrogena 69.4 3.3 0.00011 34.2 3.4 34 1-35 1-36 (312)
380 3krt_A Crotonyl COA reductase; 69.3 6.5 0.00022 35.3 5.6 39 4-46 230-269 (456)
381 1x13_A NAD(P) transhydrogenase 69.3 4.8 0.00016 36.1 4.6 31 4-36 173-203 (401)
382 1e3j_A NADP(H)-dependent ketos 69.3 14 0.00048 31.6 7.5 30 4-34 170-199 (352)
383 3ouz_A Biotin carboxylase; str 69.1 3.9 0.00013 36.5 4.0 33 1-34 4-36 (446)
384 3h5n_A MCCB protein; ubiquitin 69.1 4.4 0.00015 35.7 4.2 113 4-125 119-240 (353)
385 4aj2_A L-lactate dehydrogenase 69.0 6.1 0.00021 34.7 5.1 34 3-36 19-52 (331)
386 1gpj_A Glutamyl-tRNA reductase 68.9 4.2 0.00014 36.3 4.1 30 4-34 168-198 (404)
387 1rjw_A ADH-HT, alcohol dehydro 68.8 7.4 0.00025 33.3 5.6 30 4-34 166-195 (339)
388 2bll_A Protein YFBG; decarboxy 68.6 6 0.00021 33.1 4.9 31 5-35 2-33 (345)
389 3hwr_A 2-dehydropantoate 2-red 68.6 5.4 0.00018 34.1 4.6 30 3-33 19-48 (318)
390 1p0f_A NADP-dependent alcohol 68.4 4.1 0.00014 35.4 3.9 30 4-34 193-223 (373)
391 2aef_A Calcium-gated potassium 68.3 2.8 9.6E-05 33.9 2.6 28 4-33 10-37 (234)
392 3sxp_A ADP-L-glycero-D-mannohe 68.2 5.3 0.00018 34.1 4.5 33 3-35 10-44 (362)
393 3vku_A L-LDH, L-lactate dehydr 68.1 5.1 0.00018 35.1 4.4 34 3-36 9-42 (326)
394 3p2y_A Alanine dehydrogenase/p 68.0 4.2 0.00014 36.6 3.9 31 4-36 185-215 (381)
395 1vj0_A Alcohol dehydrogenase, 67.9 8.1 0.00028 33.7 5.7 140 4-168 197-341 (380)
396 2eih_A Alcohol dehydrogenase; 67.7 17 0.00058 31.0 7.7 148 4-182 168-318 (343)
397 2c20_A UDP-glucose 4-epimerase 67.5 6.5 0.00022 32.8 4.8 31 4-35 2-33 (330)
398 1sb8_A WBPP; epimerase, 4-epim 67.4 5.4 0.00019 33.8 4.4 32 3-35 27-59 (352)
399 2jhf_A Alcohol dehydrogenase E 67.2 7 0.00024 33.9 5.2 30 4-34 193-223 (374)
400 2csu_A 457AA long hypothetical 67.2 25 0.00085 31.9 9.0 83 3-123 8-94 (457)
401 1l7d_A Nicotinamide nucleotide 67.2 5.7 0.00019 35.1 4.6 32 4-37 173-204 (384)
402 2bka_A CC3, TAT-interacting pr 66.6 5.1 0.00017 31.9 3.8 32 4-35 19-52 (242)
403 3c1o_A Eugenol synthase; pheny 66.5 5.1 0.00017 33.5 4.0 31 4-35 5-36 (321)
404 2ydy_A Methionine adenosyltran 66.3 7 0.00024 32.4 4.8 30 4-34 3-33 (315)
405 2z1m_A GDP-D-mannose dehydrata 66.2 6.8 0.00023 32.7 4.7 34 1-35 1-35 (345)
406 2x4g_A Nucleoside-diphosphate- 66.0 7.5 0.00026 32.5 5.0 31 4-35 14-45 (342)
407 1b8p_A Protein (malate dehydro 65.6 6.2 0.00021 34.2 4.4 24 3-26 5-29 (329)
408 2zqz_A L-LDH, L-lactate dehydr 65.6 6.2 0.00021 34.4 4.4 34 3-36 9-42 (326)
409 1e3i_A Alcohol dehydrogenase, 65.4 9.8 0.00034 33.0 5.7 30 4-34 197-227 (376)
410 2v6b_A L-LDH, L-lactate dehydr 65.3 7.3 0.00025 33.3 4.8 33 4-36 1-33 (304)
411 1oju_A MDH, malate dehydrogena 64.9 6.8 0.00023 33.7 4.5 33 4-36 1-33 (294)
412 1orr_A CDP-tyvelose-2-epimeras 64.8 7.4 0.00025 32.5 4.7 30 4-34 2-32 (347)
413 4dio_A NAD(P) transhydrogenase 64.3 6.9 0.00023 35.5 4.6 32 4-37 191-222 (405)
414 3fbg_A Putative arginate lyase 64.2 7.9 0.00027 33.2 4.9 90 4-118 152-242 (346)
415 2eez_A Alanine dehydrogenase; 64.0 7.9 0.00027 33.9 4.9 30 4-34 167-196 (369)
416 1guz_A Malate dehydrogenase; o 63.8 8.1 0.00028 33.1 4.8 32 4-36 1-33 (310)
417 1pl8_A Human sorbitol dehydrog 63.6 5.1 0.00017 34.6 3.5 30 4-34 173-203 (356)
418 1ek6_A UDP-galactose 4-epimera 63.5 7.7 0.00026 32.6 4.6 32 1-34 1-33 (348)
419 2vn8_A Reticulon-4-interacting 63.4 6.9 0.00024 34.0 4.4 31 4-35 185-216 (375)
420 2q1s_A Putative nucleotide sug 63.2 8.1 0.00028 33.2 4.8 32 4-35 33-65 (377)
421 1t2a_A GDP-mannose 4,6 dehydra 62.9 8.8 0.0003 32.8 4.9 31 4-35 25-56 (375)
422 3ado_A Lambda-crystallin; L-gu 62.5 7.3 0.00025 34.0 4.3 31 4-36 7-37 (319)
423 4e4t_A Phosphoribosylaminoimid 61.7 9.3 0.00032 34.1 5.0 30 4-34 36-65 (419)
424 1smk_A Malate dehydrogenase, g 61.4 8.4 0.00029 33.3 4.5 31 3-33 8-40 (326)
425 1cdo_A Alcohol dehydrogenase; 61.3 14 0.00047 32.0 5.9 30 4-34 194-224 (374)
426 2fzw_A Alcohol dehydrogenase c 61.1 12 0.0004 32.3 5.4 30 4-34 192-222 (373)
427 3hhp_A Malate dehydrogenase; M 61.1 8.5 0.00029 33.4 4.5 33 4-36 1-35 (312)
428 2q1w_A Putative nucleotide sug 61.0 10 0.00034 31.9 4.9 32 3-35 21-53 (333)
429 2gas_A Isoflavone reductase; N 61.0 6 0.0002 32.6 3.4 31 4-35 3-34 (307)
430 4a7p_A UDP-glucose dehydrogena 61.0 8.5 0.00029 35.1 4.6 31 3-34 8-38 (446)
431 4ea9_A Perosamine N-acetyltran 60.9 10 0.00036 30.3 4.8 33 3-36 12-44 (220)
432 1kew_A RMLB;, DTDP-D-glucose 4 60.3 8.3 0.00028 32.6 4.2 31 5-35 2-33 (361)
433 2c5a_A GDP-mannose-3', 5'-epim 60.1 11 0.00039 32.4 5.1 32 3-35 29-61 (379)
434 3gqv_A Enoyl reductase; medium 60.1 11 0.00037 32.8 5.0 31 4-35 166-197 (371)
435 4eez_A Alcohol dehydrogenase 1 59.9 9.2 0.00032 32.5 4.5 142 4-173 165-307 (348)
436 2x6t_A ADP-L-glycero-D-manno-h 59.9 8.6 0.00029 32.6 4.3 32 4-35 47-79 (357)
437 3ay3_A NAD-dependent epimerase 59.7 3.9 0.00013 33.3 1.9 32 1-34 1-33 (267)
438 1rkx_A CDP-glucose-4,6-dehydra 59.6 9.1 0.00031 32.4 4.4 32 3-35 9-41 (357)
439 3ehe_A UDP-glucose 4-epimerase 59.2 7.7 0.00026 32.2 3.7 30 4-35 2-32 (313)
440 1y1p_A ARII, aldehyde reductas 59.2 13 0.00043 30.9 5.1 32 3-35 11-43 (342)
441 1wdk_A Fatty oxidation complex 58.9 6.3 0.00022 38.0 3.5 32 3-36 314-345 (715)
442 3bfp_A Acetyltransferase; LEFT 58.8 8.1 0.00028 30.5 3.7 35 1-36 1-35 (194)
443 2hrz_A AGR_C_4963P, nucleoside 58.6 8.6 0.00029 32.3 4.0 33 2-34 13-52 (342)
444 3vtf_A UDP-glucose 6-dehydroge 58.5 8.4 0.00029 35.3 4.1 39 3-45 21-59 (444)
445 1o6z_A MDH, malate dehydrogena 58.1 12 0.0004 32.0 4.8 32 4-36 1-34 (303)
446 1n7h_A GDP-D-mannose-4,6-dehyd 57.8 12 0.00042 31.9 4.9 31 4-35 29-60 (381)
447 4dim_A Phosphoribosylglycinami 57.7 11 0.00036 32.9 4.5 34 2-36 6-39 (403)
448 2xxj_A L-LDH, L-lactate dehydr 57.5 12 0.00041 32.1 4.8 33 4-36 1-33 (310)
449 4hb9_A Similarities with proba 57.2 12 0.0004 31.8 4.6 29 4-33 2-30 (412)
450 4ffl_A PYLC; amino acid, biosy 57.1 13 0.00045 31.8 5.0 30 4-34 2-31 (363)
451 1vkz_A Phosphoribosylamine--gl 57.0 12 0.00042 32.9 4.9 33 1-34 13-45 (412)
452 1xgk_A Nitrogen metabolite rep 57.0 11 0.00038 32.5 4.5 32 3-35 5-37 (352)
453 1pjq_A CYSG, siroheme synthase 56.8 37 0.0013 30.6 8.2 30 4-34 13-42 (457)
454 3ax6_A Phosphoribosylaminoimid 56.7 13 0.00046 32.0 5.0 31 4-35 2-32 (380)
455 3enk_A UDP-glucose 4-epimerase 56.2 14 0.00049 30.8 5.0 32 3-35 5-37 (341)
456 1z7e_A Protein aRNA; rossmann 55.7 12 0.00042 35.1 4.9 33 3-35 315-348 (660)
457 3oh8_A Nucleoside-diphosphate 55.3 13 0.00046 33.7 5.0 32 3-35 147-179 (516)
458 3ko8_A NAD-dependent epimerase 55.0 14 0.00047 30.4 4.6 31 4-35 1-32 (312)
459 2pzm_A Putative nucleotide sug 54.8 15 0.0005 30.9 4.8 32 3-35 20-52 (330)
460 2i6t_A Ubiquitin-conjugating e 54.5 12 0.00039 32.3 4.1 33 4-36 15-47 (303)
461 1rpn_A GDP-mannose 4,6-dehydra 54.4 15 0.00051 30.6 4.8 32 3-35 14-46 (335)
462 4dup_A Quinone oxidoreductase; 54.3 13 0.00045 31.9 4.5 30 4-34 169-199 (353)
463 4gx0_A TRKA domain protein; me 54.3 13 0.00044 34.2 4.7 31 4-35 349-379 (565)
464 2gn4_A FLAA1 protein, UDP-GLCN 54.1 13 0.00046 31.7 4.5 33 3-35 21-55 (344)
465 1mld_A Malate dehydrogenase; o 54.0 12 0.00042 32.1 4.2 33 4-36 1-34 (314)
466 3nx4_A Putative oxidoreductase 53.9 16 0.00056 30.6 5.0 30 5-35 149-179 (324)
467 2pn1_A Carbamoylphosphate synt 53.9 12 0.0004 31.5 4.0 33 1-34 2-35 (331)
468 1hye_A L-lactate/malate dehydr 53.3 15 0.0005 31.5 4.6 33 4-36 1-34 (313)
469 3rft_A Uronate dehydrogenase; 52.8 11 0.00037 30.8 3.6 33 1-34 1-34 (267)
470 1jw9_B Molybdopterin biosynthe 52.7 19 0.00064 29.7 5.1 30 4-34 32-62 (249)
471 4a9w_A Monooxygenase; baeyer-v 52.5 14 0.00046 30.6 4.2 33 1-34 1-33 (357)
472 4h7p_A Malate dehydrogenase; s 52.5 18 0.00062 31.8 5.2 26 1-26 22-48 (345)
473 2rh8_A Anthocyanidin reductase 52.4 16 0.00056 30.4 4.7 31 4-35 10-41 (338)
474 2jl1_A Triphenylmethane reduct 52.3 8.6 0.0003 31.3 2.9 31 5-35 2-34 (287)
475 3gms_A Putative NADPH:quinone 52.2 10 0.00036 32.3 3.5 31 4-35 146-177 (340)
476 2r85_A PURP protein PF1517; AT 52.2 14 0.00048 30.9 4.2 32 2-35 1-32 (334)
477 1pjc_A Protein (L-alanine dehy 52.1 17 0.00057 31.8 4.8 30 4-34 168-197 (361)
478 3phh_A Shikimate dehydrogenase 51.8 23 0.00079 30.0 5.5 31 4-35 119-149 (269)
479 2z04_A Phosphoribosylaminoimid 51.5 15 0.00051 31.4 4.4 31 4-35 2-32 (365)
480 2egg_A AROE, shikimate 5-dehyd 51.4 20 0.0007 30.4 5.2 30 4-34 142-172 (297)
481 4a0s_A Octenoyl-COA reductase/ 51.4 73 0.0025 28.1 9.1 39 4-46 222-261 (447)
482 4id9_A Short-chain dehydrogena 51.3 14 0.00047 31.0 4.1 32 3-35 19-51 (347)
483 1n2s_A DTDP-4-, DTDP-glucose o 51.2 13 0.00045 30.4 3.9 28 5-34 2-30 (299)
484 2bi7_A UDP-galactopyranose mut 51.1 18 0.00061 31.6 4.9 33 1-34 1-33 (384)
485 1nyt_A Shikimate 5-dehydrogena 50.9 20 0.00067 29.8 5.0 30 4-34 120-149 (271)
486 1db3_A GDP-mannose 4,6-dehydra 50.8 18 0.00063 30.5 4.8 31 4-35 2-33 (372)
487 1vl0_A DTDP-4-dehydrorhamnose 50.8 15 0.00053 29.9 4.2 30 4-34 13-43 (292)
488 1yo6_A Putative carbonyl reduc 50.2 21 0.00071 28.1 4.8 35 1-35 1-37 (250)
489 1i24_A Sulfolipid biosynthesis 49.7 18 0.00061 31.0 4.6 31 3-34 11-42 (404)
490 3kd9_A Coenzyme A disulfide re 49.6 15 0.00052 32.5 4.2 35 1-35 1-36 (449)
491 2zcu_A Uncharacterized oxidore 49.5 13 0.00045 30.1 3.6 31 5-35 1-33 (286)
492 2dkn_A 3-alpha-hydroxysteroid 49.2 22 0.00076 28.0 4.8 31 4-35 2-33 (255)
493 3ond_A Adenosylhomocysteinase; 49.1 17 0.00059 33.7 4.6 31 4-36 266-296 (488)
494 3d7l_A LIN1944 protein; APC893 49.1 21 0.00073 27.3 4.6 30 4-35 4-34 (202)
495 1qor_A Quinone oxidoreductase; 49.0 17 0.00058 30.6 4.3 30 4-34 142-172 (327)
496 3pi7_A NADH oxidoreductase; gr 49.0 25 0.00084 30.0 5.4 30 5-35 167-197 (349)
497 1eq2_A ADP-L-glycero-D-mannohe 48.9 18 0.00062 29.5 4.4 31 5-35 1-32 (310)
498 2p5y_A UDP-glucose 4-epimerase 48.4 21 0.00071 29.4 4.7 29 5-34 2-31 (311)
499 3d1c_A Flavin-containing putat 48.4 19 0.00065 30.2 4.5 33 1-34 2-35 (369)
500 1qv9_A F420-dependent methylen 48.2 9.9 0.00034 32.5 2.6 34 1-34 1-39 (283)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=3.9e-77 Score=534.89 Aligned_cols=203 Identities=59% Similarity=0.999 Sum_probs=198.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||||||||||+++|++++++++|+|||||++.++++++|||||||+||+|+ ++|+.+++ .|.|||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHDDK-HIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEEeecc
Confidence 799999999999999999999989999999999889999999999999999999 99999888 6999999999999999
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhHHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPLA 163 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap~l 163 (218)
|+++||++.|+|||+||||.|+++|+++.|+++||||||||+||+|+||||||||+++|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 164 KVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 164 k~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|+|||+|||++++||||||+|++|+++|+|++|||||+|++++||
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~Ni 204 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNI 204 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCC
T ss_pred HHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcc
Confidence 999999999999999999999999999999889999999999997
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=6.7e-77 Score=534.29 Aligned_cols=207 Identities=84% Similarity=1.330 Sum_probs=199.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCc-cEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~-~v~~~~~~~l~i~g~~i~v~ 79 (218)
|.++||||||||||||+++|++++++++|+|||||++.++++++|||||||+||+|+ + +|+.++++.|.|||++|+++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 656899999999999999999999989999999999889999999999999999999 9 99998773499999999999
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhH
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~L 159 (218)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+||+|+||||||||++.|+++++||||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
+|++|+|||+|||++++||||||+|++|+++|+|+++||||+|++++|+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~Ni 208 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNI 208 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCC
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCcccccccccccccee
Confidence 9999999999999999999999999999999999989999999999997
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=6.7e-76 Score=527.64 Aligned_cols=203 Identities=45% Similarity=0.716 Sum_probs=197.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||||||||||+++|++++++++|+||||| +.++++++|||||||+||+|+ ++++.+++ .|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVDG-GFRVNGKEVKSFSEP 80 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcCC-EEEECCEEEEEEEec
Confidence 589999999999999999999998999999999 579999999999999999999 99999888 699999999999999
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeecCccccCCCCCEEEcCChhhhhHHH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap 161 (218)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+||+ |+||||||||++.|+++++||||||||||||+|
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAP 160 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHH
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHH
Confidence 9999999999999999999999999999999999999999999997 689999999999999878999999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCC-CccccccccccC
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSK-DWRGLACFEWKT 208 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~-d~r~~r~a~~~~ 208 (218)
++|+|||+|||++++||||||+|++|+++|+|++| ||||+|++++||
T Consensus 161 ~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~Ni 208 (338)
T 3lvf_P 161 VAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENI 208 (338)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCC
T ss_pred HHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceE
Confidence 99999999999999999999999999999999877 999999999997
No 4
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=2.6e-75 Score=525.53 Aligned_cols=203 Identities=59% Similarity=1.031 Sum_probs=198.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||||||||||+++|++++++ +++|+||||+.++++++|||||||+||+|+ ++|+.+++ .|.|||++|++++++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFRNG-QLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEcCC-EEEECCEEEEEEecC
Confidence 489999999999999999999886 999999999999999999999999999999 99999888 699999999999999
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCC-CCCEEEcCChhhhhHHH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~-~~~IIs~aSCtT~~Lap 161 (218)
||+++||++.|+||||||||.|+++|+++.|+++||||||||+||+|+||||||||++.|++ +++||||||||||||+|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987 78999999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
++|+|||+|||++++||||||+|++|+++|+|++|||||+|++++||
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~Ni 210 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNI 210 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCC
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeee
Confidence 99999999999999999999999999999999989999999999997
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=9.9e-76 Score=529.77 Aligned_cols=204 Identities=52% Similarity=0.892 Sum_probs=197.0
Q ss_pred ccEEEEEccChhHHHHHHH----HHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEE--------eCCceEE
Q 027805 3 KVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKV--------KDDKTLL 70 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~----~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~--------~~~~~l~ 70 (218)
++||||||||||||+++|+ +++++++|+||||||+.++++++|||||||+||+|+ ++|+. +++ .|.
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~-~l~ 79 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDD-TLV 79 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCC-EEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCC-EEE
Confidence 5899999999999999999 778889999999999889999999999999999999 99998 666 699
Q ss_pred ECCEEEEEEe-ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeecCccccCC-CCC
Q 027805 71 FGEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELN 147 (218)
Q Consensus 71 i~g~~i~v~~-~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~~V~gvN~~~~~~-~~~ 147 (218)
|||++|++++ +++|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ +++
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~ 159 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHH 159 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCS
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCC
Confidence 9999999998 999999999999999999999999999999999999999999999997 6999999999999997 789
Q ss_pred EEEcCChhhhhHHHHHHHH-HhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 148 IVSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 148 IIs~aSCtT~~Lap~lk~L-~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
||||||||||||+|++|+| ||+|||++++||||||+|++|+++|+|++|||||+|++++||
T Consensus 160 IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~Ni 221 (359)
T 3ids_C 160 VVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNI 221 (359)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCC
T ss_pred EEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCccee
Confidence 9999999999999999999 999999999999999999999999999888999999999997
No 6
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=2.4e-75 Score=523.86 Aligned_cols=202 Identities=45% Similarity=0.750 Sum_probs=195.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
++||||||||||||+++|+++++ +++|+|||||+ .++++++|||||||+||+|+ ++++.+++ .|.|||++|++++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVAGD-TIDVGYGPIKVHA 78 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEECSS-EEESSSSEEEEEC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEecC-EEEECCEEEEEEe
Confidence 48999999999999999999987 68999999999 59999999999999999999 99999887 6999999999999
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEEcCChhhhhH
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~~~~IIs~aSCtT~~L 159 (218)
++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+++++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 9999999999999999999999999999999999999999999999987 699999999999988889999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
+|++|+|||+|||++++||||||+|++|+++|+|+ |||||+|+|++||
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~Ni 206 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSM 206 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSC
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceE
Confidence 99999999999999999999999999999999996 8999999999997
No 7
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=4.5e-75 Score=523.14 Aligned_cols=202 Identities=44% Similarity=0.774 Sum_probs=183.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||||||||||+++|++++++++|+|||||+ .++++++|||||||+||+|+ ++++.+++ .|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~~~-~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAFED-HLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEcCC-EEEECCEEEEEeecC
Confidence 4799999999999999999999989999999999 59999999999999999999 99999888 699999999999999
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeecCccccCC-CCCEEEcCChhhhhHH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~~V~gvN~~~~~~-~~~IIs~aSCtT~~La 160 (218)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+||+ |+||||||||++.|++ +++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999997 5899999999999987 6899999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 161 p~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|++|+|||+|||++++||||||+|++|+++|+|+ +||||+|++++||
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NI 207 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSI 207 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCC
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhce
Confidence 9999999999999999999999999999999997 8999999999997
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=2.2e-72 Score=507.45 Aligned_cols=202 Identities=43% Similarity=0.778 Sum_probs=194.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
|++||||||||||||.++|+++++ +++||+|||+. ++++++|||||||+||+|+ ++++.+++ .|.|||++|+++++
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl~-d~~~~a~llkydS~hG~f~-~~v~~~~~-~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDLT-DPKTLAHLLKYDSTFGVYN-KKVESRDG-AIVVDGREIKIIAE 95 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS-CHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC-CHHHhhhhhccccCCCCCC-CCEEEcCC-EEEECCEEEEEEEc
Confidence 358999999999999999999998 79999999994 9999999999999999999 99999888 69999999999999
Q ss_pred cCCCCCCccCCCccEEEeeCCcccC----HHhHHHHHh-CCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEEcCChh
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCT 155 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~----~~~a~~h~~-~GakkViis~ps~d-~p~~V~gvN~~~~~~~~~IIs~aSCt 155 (218)
+||+++||++.|+|||+||||.|++ +++++.|++ +||||||||+||+| +||||||||++.|+++++||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999987 69999999999999878999999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
||||+|++|+|||+|||++++||||||+|++|+++|+|+ |||||+|++++||
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NI 227 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSI 227 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSC
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEE
Confidence 999999999999999999999999999999999999997 8999999999997
No 9
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=5.9e-71 Score=497.87 Aligned_cols=206 Identities=59% Similarity=0.981 Sum_probs=196.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|.++||||||||||||+++|++++++++|||+||||+.++++++|||||||+||+|+ ++++++++ .|.+||++|++++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~~~-~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHADG-FLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEcCC-EEEECCEEEEEEE
Confidence 556899999999999999999999999999999998789999999999999999999 99999877 6999999999999
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEEcCChhhhhH
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~~~~IIs~aSCtT~~L 159 (218)
++||++++|++.|+||||||||.|+++++++.|+++||||||||+||++ +||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 9999999999999999999999999999999999999999999999986 799999999999987678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCC--CCCccccccccccC
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPS--SKDWRGLACFEWKT 208 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~--~~d~r~~r~a~~~~ 208 (218)
+|++|+|||+|||++++||||||+|++|+++|+|+ ++||||+|++++||
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~Ni 217 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNI 217 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhcc
Confidence 99999999999999999999999999999999997 38999999999997
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.6e-69 Score=487.25 Aligned_cols=201 Identities=42% Similarity=0.676 Sum_probs=194.0
Q ss_pred cEEEEEccChhHHHHHHHHHcC---CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~---~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+||||||||||||+++|+++++ +++|+|+|||+ .++++++|||||||+||+|+ ++++++++ .|.++|++|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVNGS-YMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEeCC-EEEECCEEEEEEE
Confidence 6999999999999999999988 89999999997 59999999999999999999 99999877 6999999999999
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CCC-eEEeecCccccCCCCCEEEcCChhhhh
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNENEYKPELNIVSNASCTTNC 158 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p-~~V~gvN~~~~~~~~~IIs~aSCtT~~ 158 (218)
++||++++|++.|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999997 789 999999999998767899999999999
Q ss_pred HHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 159 LAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 159 Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|+|++|+|||+|||++++||||||+|++|+++|+|+ +||||+|++++|+
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~Ni 207 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSM 207 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhcc
Confidence 999999999999999999999999999999999995 8999999999997
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=4.7e-70 Score=491.72 Aligned_cols=202 Identities=48% Similarity=0.853 Sum_probs=194.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||||||||||+++|++++++++++|+|||. .++++++|||||||+||+|+ ++++++++ .|.+||++|++++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~~~-~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAKDD-SIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEECSS-EEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEcCC-EEEECCEEEEEEEcC
Confidence 4799999999999999999999999999999995 59999999999999999999 99999877 699999999999999
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCC-eEEeecCccccCC-CCCEEEcCChhhhhHH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKP-ELNIVSNASCTTNCLA 160 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p-~~V~gvN~~~~~~-~~~IIs~aSCtT~~La 160 (218)
+|++++|++.|+||||||||.|+++++++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999987 6789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 161 p~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|++|+|||+|||++++||||||+|++|+++|+|+ +||||+|++++|+
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~Ni 205 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINI 205 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCC
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCc
Confidence 9999999999999999999999999999999995 8999999999997
No 12
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.3e-63 Score=455.50 Aligned_cols=206 Identities=40% Similarity=0.714 Sum_probs=195.2
Q ss_pred CccEEEEEccChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|++||||||||||||.++|+++++ |+++||+|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.|+++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeCC-eEEECCeEEEEE
Confidence 248999999999999999999988 89999999997 59999999999999999999 99999888 699999999999
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEEcCChhh
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p-~~V~gvN~~~~~~-~~~IIs~aSCtT 156 (218)
+++||++++|++.++|+||||||.|+++++++.|+++|+||||||+|++| +| +||||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtT 157 (380)
T 2d2i_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (380)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHH
Confidence 99999999998889999999999999999999999999999999999987 78 9999999999987 478999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 157 ~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
|||+|++|+||++|||++++||||||+|++|+++|+++ +||||+|+|++||=-|
T Consensus 158 n~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~ 211 (380)
T 2d2i_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPT 211 (380)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEE
T ss_pred HHHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEec
Confidence 99999999999999999999999999999999999996 7999999999998543
No 13
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.7e-63 Score=448.21 Aligned_cols=203 Identities=48% Similarity=0.744 Sum_probs=193.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||||||||||.++|+++++ ++++++|||. .++++++|||+|||+||+|+ ++++++++ .|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYDDQ-YLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEECSS-EEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEcCC-EEEECCEEEEEEecCC
Confidence 4899999999999999999988 8999999996 59999999999999999999 99998777 6999999999999999
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEEcCChhhhhHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~-~~~IIs~aSCtT~~Lap 161 (218)
|++++|++.++|+||||||.|+++++++.|+++||||||||+|++| +|+||||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999986 47899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
++|+||++|||++++||||||+|++|+++|+|+ +||||+|++++|+=-|
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~ 205 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPT 205 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEE
T ss_pred HHHHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCcccc
Confidence 999999999999999999999999999999985 8999999999998544
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=2.4e-62 Score=441.98 Aligned_cols=206 Identities=40% Similarity=0.715 Sum_probs=195.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|++||||||||||||.++|+++++ |++++|+|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~ 77 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDEN-SITVNGKTMKIV 77 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEETT-EEEETTEEEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcCC-eeeecCceEEEE
Confidence 248999999999999999999988 89999999997 49999999999999999999 99998877 699999999999
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEEcCChhh
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNENEYKP-ELNIVSNASCTT 156 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p-~~V~gvN~~~~~~-~~~IIs~aSCtT 156 (218)
+++||++++|++.++|+||||||.|++++.++.|+++|+||||||+|++| +| +||||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtT 157 (339)
T 3b1j_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (339)
T ss_dssp CCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchh
Confidence 99999999999899999999999999999999999999999999999987 78 9999999999987 478999999999
Q ss_pred hhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 157 ~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
|||+|++|+||++|||++++|||+|++|++|+++|++| +||||+|+|++|+=-|
T Consensus 158 n~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~ 211 (339)
T 3b1j_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPT 211 (339)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEE
T ss_pred hHHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcc
Confidence 99999999999999999999999999999999999996 7999999999998543
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=4.6e-62 Score=439.70 Aligned_cols=204 Identities=43% Similarity=0.718 Sum_probs=193.3
Q ss_pred cEEEEEccChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEE-EeCCceEEECCEEEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELK-VKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~-~~~~~~l~i~g~~i~v~~ 80 (218)
+||||||||||||.++|+++++ |++|||+|||. .++++++|||+|||+||+|. +++. ++++ .|.++|+.|.+++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~-~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDS-AISVDGKVIKVVS 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTS-EEEETTEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCC-eEEECCeEEEEEe
Confidence 7999999999999999999988 99999999995 69999999999999999999 8988 4555 6999999999999
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEEcCChhhhhH
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCL 159 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~~~~IIs~aSCtT~~L 159 (218)
++||++++|++.++|+||||||.|.++++++.|+++|+|+|++|+|+.| +|+||||||++.|++.++||||||||||||
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 9999999999889999999999999999999999999999999999876 799999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
+|++|+||++|||+++.|||+||+|++|+++|+++ +||||+|++++||=-|
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~ 209 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPT 209 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEE
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccc
Confidence 99999999999999999999999999999999996 8999999999998554
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=8.7e-62 Score=440.32 Aligned_cols=208 Identities=60% Similarity=1.004 Sum_probs=194.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+++||||||||||||.++|+++++|++|||+||||..++++++|||+|||+||+|. +.++++++ .|.+||+.|+++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~~~-~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVSGK-DLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEECC--CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEeCC-EEEECCeEEEEEec
Confidence 45899999999999999999999999999999997779999999999999999999 99998877 69999999999999
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCCC-CCEEEcCChhhhhH
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPE-LNIVSNASCTTNCL 159 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~~-~~IIs~aSCtT~~L 159 (218)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +|+||||||++.|++. ++||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998889999999999999999999999999999999999986 7999999999999864 78999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCC--CCccccccccccCccc
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSS--KDWRGLACFEWKTDWY 211 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~--~d~r~~r~a~~~~~~~ 211 (218)
+|++|+|+++|||+++.|||+||+|++|+++|++++ |||||+|++++||--|
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~ 227 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPA 227 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEE
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEec
Confidence 999999999999999999999999999999999963 7999999999998654
No 17
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=2.6e-61 Score=434.93 Aligned_cols=210 Identities=81% Similarity=1.278 Sum_probs=195.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEE-eCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKV-KDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~-~~~~~l~i~g~~i~v~ 79 (218)
||++||||||||||||.++|++.++|++|||+|||+..++++++|||||||+||+|+++.+++ +++ .|.+||+.|+++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~-~l~~~g~~i~v~ 79 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSK-TLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSS-EEEETTEEEEEE
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCC-eeEECCeEEEEE
Confidence 666899999999999999999999999999999997568999999999999999985135665 566 699999999999
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhH
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCL 159 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~L 159 (218)
+++||++++|++.++|+||||||.|.+.+.++.|+++|+||||||+|++|.|++|||||++.|++.++||||||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l 159 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHH
Confidence 99999999998889999999999999999999999999999999999999999999999999986678999999999999
Q ss_pred HHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 160 APLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 160 ap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
+|++|+||++|||+++.|||+||+|++|+++|+++++|||++|++++|+--|
T Consensus 160 a~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~ 211 (337)
T 3e5r_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPS 211 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEE
T ss_pred HHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCcccc
Confidence 9999999999999999999999999999999999878999999999998544
No 18
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=5e-61 Score=432.62 Aligned_cols=204 Identities=50% Similarity=0.802 Sum_probs=194.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||||||||||.++|.++++|+++||+|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.|++++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVNGN-NLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEccC-cEEECCEEEEEEecCC
Confidence 799999999999999999999999999999996 59999999999999999999 89999888 6999999999998899
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEEcCChhhhhHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~-~~~IIs~aSCtT~~Lap 161 (218)
|++++|++.++|+||||||.|++++.++.|+++|+||||||+|++| +|++|||||++.|++ .++||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 799999999999986 47899999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
++|+||++|||+++.|||+||+|++|+++|+|+ +|||++|++++|+=-|
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~ 207 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPT 207 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEE
T ss_pred HHHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEee
Confidence 999999999999999999999999999999995 8999999999998544
No 19
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=6.9e-61 Score=431.66 Aligned_cols=209 Identities=63% Similarity=1.025 Sum_probs=197.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
||++||||||||||||.++|++.++|++|||+|||+..++++++||++|||+||+|. +.++++++ .|.+||+.|++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~~~-~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAENG-KLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEcCC-eEEECCeEEEEEe
Confidence 677899999999999999999999899999999997558999999999999999999 89998877 6999999999999
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhHH
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~La 160 (218)
++||++++|++.++|+||||||.|.+.+.++.|+++|+|+|++|+|++|.|++|||||++.|++.++||||||||||||+
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 99999999998999999999999999999999999999999999998889999999999999865789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 161 p~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
|++|+|+++|||+++.|||+|++|++|+.+|+++++|||++|++++|+--|
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~ 209 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPA 209 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEE
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceec
Confidence 999999999999999999999999999999999768999999999998544
No 20
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=3.4e-60 Score=426.53 Aligned_cols=204 Identities=55% Similarity=0.913 Sum_probs=194.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||||||||||.++|+++++|++|||+|||. .++++++|||+|||+||+|. +.++++++ .|.+||++|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVKDG-HLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEcCC-EEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999996 48999999999999999999 99998877 6999999999999999
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEEcCChhhhhHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d-~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap~ 162 (218)
|+++||++.++|+||||||.|.+++.++.|+++|+|+|++|+|+++ +|++|||||++.|+ .++||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999864 79999999999998 678999999999999999
Q ss_pred HHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 163 AKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 163 lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
+|+||++|||+++.|||+||+|++|+.+|+++++|||++|++++|+--|
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~ 206 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPS 206 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEE
T ss_pred HHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEc
Confidence 9999999999999999999999999999999878999999999998655
No 21
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.7e-60 Score=427.49 Aligned_cols=204 Identities=46% Similarity=0.795 Sum_probs=194.1
Q ss_pred cEEEEEccChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+||||||||||||.++|.++++ |++|||+|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYTEN-SLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEECSS-EEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEcCC-EEEECCeEEEEEec
Confidence 4899999999999999999988 99999999996 59999999999999999999 89998877 69999999999988
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCC-eEEeecCccccCCCCCEEEcCChhhhhHH
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNENEYKPELNIVSNASCTTNCLA 160 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p-~~V~gvN~~~~~~~~~IIs~aSCtT~~La 160 (218)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|+| ++|||||++.|++.++||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 99999999988999999999999999999999999999999999999899 99999999999865789999999999999
Q ss_pred HHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 161 PLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 161 p~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
|++|+|+++|||+++.|||+||+|++|+++|+|+ +|||++|++++|+--|
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~ 207 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPT 207 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEE
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccc
Confidence 9999999999999999999999999999999995 8999999999998654
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=8.1e-60 Score=425.45 Aligned_cols=205 Identities=37% Similarity=0.673 Sum_probs=183.8
Q ss_pred ccEEEEEccChhHHHHHHHHHc---CCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~---~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
++||||||||+|||.++|++++ +|+++||+|||. .++++++|||+|||+||+|. ++++++++ .|.++|+.++++
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~~~-~l~v~g~~i~v~ 78 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQERD-QLFVGDDAIRVL 78 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEETT-EEEETTEEEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEcCC-eeEECCEEEEEE
Confidence 4899999999999999999998 899999999997 58999999999999999999 99999887 699999999999
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC-CCCC-eEEeecCccccCCCCCEEEcCChhhh
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNENEYKPELNIVSNASCTTN 157 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps-~d~p-~~V~gvN~~~~~~~~~IIs~aSCtT~ 157 (218)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|+ .|+| ++|||||++.|++..+||||||||||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 889999999988899999999999999999999999999999999998 6788 99999999999865689999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||+|++|+||++|||+++.|||+||+|++|+++|++| +||||+|++++|+=-|
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~ 211 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPV 211 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEE
T ss_pred HHHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccc
Confidence 9999999999999999999999999999999999996 7999999999998433
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.5e-45 Score=332.87 Aligned_cols=181 Identities=19% Similarity=0.179 Sum_probs=156.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeec--cccccc--cCccE-EEeCCceEEECCEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKP 75 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kyd--S~~G~~--~~~~v-~~~~~~~l~i~g~~ 75 (218)
|| +||||||||+|||.++|++.++++++||+|||. ++++++||++|| |+||+| + +++ +++++ .+.++|
T Consensus 1 Mm-ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~~-~l~v~~-- 73 (343)
T 2yyy_A 1 MP-AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFEDA-GIPVEG-- 73 (343)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHHT-TCCCCC--
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccCC-eEEECC--
Confidence 54 899999999999999999999999999999996 589999999999 999998 5 555 44445 477776
Q ss_pred EEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHH-HHHhCCCCEEEEeCCCC-C-CC-eEEeecCccccCCCCCEEEc
Q 027805 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNENEYKPELNIVSN 151 (218)
Q Consensus 76 i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~-~h~~~GakkViis~ps~-d-~p-~~V~gvN~~~~~~~~~IIs~ 151 (218)
++.++.| ++|+||||||.+.+.+.++ .|+++| ++||+|+|++ | +| |||||||++.|++ ++||||
T Consensus 74 -------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn 141 (343)
T 2yyy_A 74 -------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRV 141 (343)
T ss_dssp -------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEE
T ss_pred -------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEec
Confidence 2444556 8999999999999999996 999999 5699999986 5 78 9999999999985 689999
Q ss_pred CChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 152 ASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 152 aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||||||||+|++|+||++|||++++|||+|++|+ |+ |++|+++.|+--+
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~~----~~~r~~~~NiiP~ 190 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAAD-------PN----DDKTGPVNAITPN 190 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------TT----CSSCCCSSCCEES
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------cC----cchhhHHhcccCC
Confidence 9999999999999999999999999999999999 22 6678888887543
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=4.7e-36 Score=269.32 Aligned_cols=172 Identities=22% Similarity=0.301 Sum_probs=145.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+||||+| ||++|+.++|.+.++ |.++++ ++...+ .++. .+.++|+.+.++.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~--------------~~~s~~-----------~~g~-~l~~~g~~i~v~~ 54 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR--------------LYASPR-----------SAGV-RLAFRGEEIPVEP 54 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE--------------EEECGG-----------GSSC-EEEETTEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE--------------Eeeccc-----------cCCC-EEEEcCceEEEEe
Confidence 4899999 999999999999854 433322 221111 1123 5889999999977
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCCCCEEEcCChh
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASCT 155 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~~~IIs~aSCt 155 (218)
+ +|+ +| ++|+||+|+|.|.+++.++.|+++|+ ++|+.+++ |.|++|||||++.|+...+||||||||
T Consensus 55 ~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~ 126 (331)
T 2yv3_A 55 L-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCT 126 (331)
T ss_dssp C-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHH
T ss_pred C-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHH
Confidence 6 565 58 89999999999999999999999999 56777765 579999999999998646799999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeccCCC------------CccccCCCCCCccccccccccCc
Q 027805 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITAT------------QKTVDGPSSKDWRGLACFEWKTD 209 (218)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~------------Q~~~D~~~~~d~r~~r~a~~~~~ 209 (218)
||||+|++++|+++|||+++.|||+|++|++ |+++|+++.++||++|+++.|+-
T Consensus 127 tt~~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~nii 192 (331)
T 2yv3_A 127 TAILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVI 192 (331)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCB
T ss_pred HHHHHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcc
Confidence 9999999999999999999999999999999 99999988789999999999985
No 25
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.7e-36 Score=271.49 Aligned_cols=179 Identities=20% Similarity=0.197 Sum_probs=149.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeec--cccccccCccE-EEeCCceEEECCEEEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kyd--S~~G~~~~~~v-~~~~~~~l~i~g~~i~v~~ 80 (218)
+||||+|+|+||+.++|.+.++|++++++|+|. +++..+++++|+ ++||.|+ +.+ .+++. .+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~~------ 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAGT------ 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCEE------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcCC------
Confidence 799999999999999999999899999999997 567788899888 8899887 654 33333 3555542
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CC--CeEEeecCccccCCCCCEEEcCChhhh
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNENEYKPELNIVSNASCTTN 157 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~--p~~V~gvN~~~~~~~~~IIs~aSCtT~ 157 (218)
++++.| ++|+||+|||.+.+.+.++.|+++|+ +||+++|.+ |. |+||||+|++.++. .+|||||||+||
T Consensus 72 ---~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 72 ---VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp ---HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred ---HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 222223 79999999999999999999999996 488888865 33 99999999999985 589999999999
Q ss_pred hHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 158 CLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 158 ~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||+|++++|+++|||+++.|||+|++|+ |+ +.+|++++|+--|
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~ 186 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPN 186 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEES
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEec
Confidence 9999999999999999999999999998 32 3455778888877
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.7e-34 Score=259.62 Aligned_cols=176 Identities=25% Similarity=0.276 Sum_probs=133.3
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~ 77 (218)
|+++||||+| +|+||+.++|.+.++ |+++++++++.. + -| +.+.++|+.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~-~G------------~~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S-EG------------KTYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-TT------------CEEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C-CC------------CceeecCceeE
Confidence 3458999999 999999999999988 889999999742 1 11 13446777777
Q ss_pred EEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--CCEEE
Q 027805 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--LNIVS 150 (218)
Q Consensus 78 v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~--~~IIs 150 (218)
+ ++.+++ +|. ++|+||+|+|.+.+.+.++.|+++|+ ++|+.+++ +.|++|||+|++.|+.. .+|||
T Consensus 55 ~-~~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 55 V-QNVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGV--VVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp E-EEGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEE
T ss_pred E-ecCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCC--EEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEE
Confidence 6 444554 684 89999999999999999999999999 45666654 57999999999999752 57999
Q ss_pred cCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCc-cccCCCC-----------CCccccccccccCc
Q 027805 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSS-----------KDWRGLACFEWKTD 209 (218)
Q Consensus 151 ~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~-~~D~~~~-----------~d~r~~r~a~~~~~ 209 (218)
||||+||||+|++++|+++|||+++.|||+|++|++|+ .+|.++. .++|++|+++.|+-
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~nii 198 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCI 198 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcc
Confidence 99999999999999999999999999999999999975 8898753 37899999899874
No 27
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.2e-34 Score=259.78 Aligned_cols=179 Identities=21% Similarity=0.221 Sum_probs=148.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeec--cccccccCccE-EEeCCceEEECCEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kyd--S~~G~~~~~~v-~~~~~~~l~i~g~~i~v 78 (218)
|++||||+|+|+||+.++|++.++|++++++|+|. +++.+.++++|+ ++||+|+ +.+ .++++ .+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC-----
Confidence 14899999999999999999999999999999997 578888999888 8899887 554 11122 133332
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-C-C-CeEEeecCccccCCCCCEEEcCChh
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNENEYKPELNIVSNASCT 155 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d-~-p~~V~gvN~~~~~~~~~IIs~aSCt 155 (218)
+++++.| ++|+|++|||.+...+.++.|+++| |+||+++|.+ | . |++|+|+|++.|+. .++|+|+||+
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 3344434 7999999999999999999999999 5799999975 4 4 59999999999974 5799999999
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 156 T~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||||+|++++|++. |+++.++|+|++|+.| |++|++++|+=-|
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~-----------~~~r~~~~niiP~ 185 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADPN-----------DTKRGPINAIKPT 185 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCTT-----------CCSCCCSSCCEEC
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCcc-----------ccccChhhcEEec
Confidence 99999999999988 9999999999999964 5678888887544
No 28
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.4e-33 Score=253.95 Aligned_cols=179 Identities=13% Similarity=0.127 Sum_probs=146.5
Q ss_pred CccEEEEEc-cChhHHHHHHHHH--cCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 2 GKVKIGING-FGRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~--~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
|++||+|+| +|++|+.++|.+. ..|.++++++++.. + .|+ .+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-~g~------------~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-AGQ------------RMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-TTC------------EEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-CCC------------ccccCCcceEE
Confidence 458999999 9999999999998 55889999998742 1 121 24466666666
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC--CCCeEEeecCccccCCCC--CEEEcCCh
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYKPEL--NIVSNASC 154 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~--d~p~~V~gvN~~~~~~~~--~IIs~aSC 154 (218)
. +.+++. |. ++|+||+|+|.+.+.+.++.|+++|+|+|.+|++.. +.|++|+++|++.|+... +|||||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 3 345544 74 899999999999999999999999998777777753 368999999999997532 79999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCc-cccCCCC--CCcccc---------ccccccCccc
Q 027805 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK-TVDGPSS--KDWRGL---------ACFEWKTDWY 211 (218)
Q Consensus 155 tT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~-~~D~~~~--~d~r~~---------r~a~~~~~~~ 211 (218)
+||||+|++++|+++|||+++.|||+|++|++|+ .+|.++. +|||++ |+++.|+--|
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~ 202 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQ 202 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSS
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeecc
Confidence 9999999999999999999999999999999996 4786431 678875 6678888665
No 29
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.97 E-value=7.6e-34 Score=258.35 Aligned_cols=181 Identities=16% Similarity=0.135 Sum_probs=143.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
+||||+| +|++|+.++|.++...+++++.| ++++|+| +|+-- . .++|+.+.+....
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~v----~-------~~~g~~i~~~~~~ 58 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQAA----P-------SFGGTTGTLQDAF 58 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSBC----C-------GGGTCCCBCEETT
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCCc----c-------ccCCCceEEEecC
Confidence 6999999 99999999996555444433332 6677887 77521 0 1345556665544
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCC---C-CEEEcCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE---L-NIVSNAS 153 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~---~-~IIs~aS 153 (218)
++++ |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |.|++|+|||++.|+.. . ++|+|||
T Consensus 59 ~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~ 134 (367)
T 1t4b_A 59 DLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGN 134 (367)
T ss_dssp CHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCC
Confidence 4544 74 899999999999999999999999999899999986 67999999999998742 1 6999999
Q ss_pred hhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCC--cc-----------------ccCCCCC--Cccc------------
Q 027805 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQ--KT-----------------VDGPSSK--DWRG------------ 200 (218)
Q Consensus 154 CtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q--~~-----------------~D~~~~~--d~r~------------ 200 (218)
|||||++|++++|+++|+|+++.|||+|++|+++ .. +|.|+++ ||||
T Consensus 135 Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~~ 214 (367)
T 1t4b_A 135 CTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELP 214 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccCc
Confidence 9999999999999999999999999999999994 32 5667632 8888
Q ss_pred ----cccccccCccc
Q 027805 201 ----LACFEWKTDWY 211 (218)
Q Consensus 201 ----~r~a~~~~~~~ 211 (218)
+|.+++|+--|
T Consensus 215 ~~~f~~~~a~NiiP~ 229 (367)
T 1t4b_A 215 VDNFGVPLAGSLIPW 229 (367)
T ss_dssp CTTTSSCCTTCEESC
T ss_pred ccccchhhhCceEEE
Confidence 47778886544
No 30
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=99.97 E-value=1e-32 Score=248.45 Aligned_cols=180 Identities=18% Similarity=0.195 Sum_probs=132.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||+|+|+||+.++|++.++|+++|++|+|. +++..+++++++- +-.+. .. ..+ .+ +++..+.+. .+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g-~~~~~-~~---~~~-~~-~~~~~v~v~--~~ 70 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG-IRIYV-PQ---QSI-KK-FEESGIPVA--GT 70 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT-CCEEC-CG---GGH-HH-HHTTTCCCC--CC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC-cceec-Cc---CHH-HH-hcccccccc--cC
Confidence 799999999999999999999999999999996 5667777776531 00000 00 000 00 111011110 01
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC--CCeEEeecCccccCCCCCEEEcCChhhhhHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d--~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap 161 (218)
++++ + .++|+||+|||.+.+.+.++.|+++|+|+|.+|++..+ .++||+|+|++.+.. .++|||||||||||+|
T Consensus 71 ~e~l-~--~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~~ 146 (340)
T 1b7g_O 71 VEDL-I--KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALLR 146 (340)
T ss_dssp HHHH-H--HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHHH
T ss_pred HhHh-h--cCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHHH
Confidence 1111 1 26899999999999999999999999998888887654 479999999876543 3599999999999999
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCc
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTD 209 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~ 209 (218)
++|+|+++|||+++.|||+|+++. | +++ .|++.+|+-
T Consensus 147 ~lk~L~~~~gI~~~~~tt~~~~~~-------~-~~~---~~~~~~nii 183 (340)
T 1b7g_O 147 TICTVNKVSKVEKVRATIVRRAAD-------Q-KEV---KKGPINSLV 183 (340)
T ss_dssp HHHHHHTTSCEEEEEEEEEEESSC-------T-TCC---SCCCSSCCE
T ss_pred HHHHHHHhCCeEEEEEEEEeccCC-------c-ccc---hHHHHcCCC
Confidence 999999999999999999998863 3 234 346677774
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.97 E-value=1.2e-31 Score=242.05 Aligned_cols=183 Identities=17% Similarity=0.201 Sum_probs=144.4
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+++||||+| +|++|+.++|.+.++|+++|+++++...+.. -+|++.|+.+. ++ .+.++++.+.+ +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g-----~~~~~~~~~~~-------~~-~~~~~~~~~~~-~ 68 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIG-----KKYKDAVKWIE-------QG-DIPEEVQDLPI-V 68 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTT-----SBHHHHCCCCS-------SS-SCCHHHHTCBE-E
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcC-----CCHHHhcCccc-------cc-ccccCCceeEE-e
Confidence 468999999 9999999999999999999999985311111 12577776542 12 23333444444 3
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCC----------C
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP----------E 145 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~----------~ 145 (218)
+.+++. |. ++|+||+|||.+.+.+.++.|+++|+| ||++|++ +.|++|+|+|++.|+. .
T Consensus 69 ~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 142 (350)
T 2ep5_A 69 STNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWK 142 (350)
T ss_dssp CSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCS
T ss_pred eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccC
Confidence 334544 52 899999999999999999999999994 7899875 5899999999998873 2
Q ss_pred CCEEEcCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCcccc
Q 027805 146 LNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWYG 212 (218)
Q Consensus 146 ~~IIs~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~~ 212 (218)
.++||||||+|||++|++++|+++|||+++.|||+|++|++|+. ++ ..|.++.|+--|+
T Consensus 143 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~------~~~~~~~ni~py~ 201 (350)
T 2ep5_A 143 GILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GI------SFMAIEGNIIPYI 201 (350)
T ss_dssp SEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SS------BHHHHTTCCBCCC
T ss_pred ceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CC------CChHHhCCEEecc
Confidence 35999999999999999999999999999999999999999988 23 2456788887665
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.96 E-value=3.7e-30 Score=232.31 Aligned_cols=184 Identities=21% Similarity=0.259 Sum_probs=142.2
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC-CCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd-~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|++||||+| +|+||+.++|.+.++|+++|+++++ +....+ ++++.|+.+. . . .+..++..+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~------~~~~~~~~~~-~------~-~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGK------KYKDACYWFQ-D------R-DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTS------BHHHHSCCCC-S------S-CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccc------cHHHhccccc-c------c-ccccCceeeEE-
Confidence 358999999 9999999999999999999999985 321111 1366676542 1 0 11122223333
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCC----------
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKP---------- 144 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~---------- 144 (218)
.+.++++ |.+.++|+||+|+|.+.+.+.++.|+++|++ |||+|++ +.|++++|+|++.|+.
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 3345654 6445899999999999999999999999984 8999975 4789999999998863
Q ss_pred CCCEEEcCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCcccc
Q 027805 145 ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWYG 212 (218)
Q Consensus 145 ~~~IIs~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~~ 212 (218)
..++||||||+|||++|++++|+++|||+++.|+|+|++|++|+. +. . .|.++.|+--|+
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~---~---~~~~~~ni~py~ 207 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GV---P---SMAILDNLIPFI 207 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TS---C---HHHHTTCCBSCC
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--cc---c---chHHhCCEEecc
Confidence 235999999999999999999999999999999999999999988 22 2 246678876665
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.96 E-value=6.6e-30 Score=231.61 Aligned_cols=177 Identities=12% Similarity=0.135 Sum_probs=140.7
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+| +|+||+.++|.+.++|+++++++++.. +.. .+|+++|++|. +.+ . . .+.+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~g-----~~~~~~~~~~~-~~v-~--~-dl~~-------- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KAG-----QSMESVFPHLR-AQK-L--P-TLVS-------- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TTT-----SCHHHHCGGGT-TSC-C--C-CCBC--------
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hcC-----CCHHHhCchhc-Ccc-c--c-ccee--------
Confidence 4458999999 999999999999999999999999863 222 56789998887 432 0 1 1222
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC---C------------------CeEEeec-
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD---A------------------PMFVVGV- 137 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d---~------------------p~~V~gv- 137 (218)
++ ++ .|. ++|+||+|+|.+.+.+.++.| ++|+ ++|+.+++. . +++|||+
T Consensus 75 ~~---~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvp 145 (359)
T 1xyg_A 75 VK---DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLT 145 (359)
T ss_dssp GG---GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCH
T ss_pred cc---hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECC
Confidence 11 22 575 899999999999999999999 9998 578888742 2 4688887
Q ss_pred --CccccCCCCCEEEcCChhhhhHHHHHHHHHhhcCee--EEEEEEEeccCCCCcc-ccCCCCCCccccccccccCcccc
Q 027805 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGLACFEWKTDWYG 212 (218)
Q Consensus 138 --N~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~~fgI~--~~~~Ttvha~t~~Q~~-~D~~~~~d~r~~r~a~~~~~~~~ 212 (218)
|++.++. .++||||||+|||++|++++|+++|+|+ ++.|||+|++|++|+. .|.++ +++ +++|+--|+
T Consensus 146 E~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~ni~py~ 218 (359)
T 1xyg_A 146 EILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YSE-----IAEGISSYG 218 (359)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HHH-----HTTCCEECS
T ss_pred ccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hHH-----HhcCeeccc
Confidence 9999975 6899999999999999999999999999 9999999999999994 77654 232 356665554
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.95 E-value=2.1e-28 Score=220.56 Aligned_cols=177 Identities=15% Similarity=0.049 Sum_probs=137.7
Q ss_pred CC-ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 1 MG-KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 1 m~-~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
|| ++||||+| +|+||+.++|.+.++|++|++++++.. +.. .+|++.|++|. +. . .+ .+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~g-----~~~~~~~~~~~-g~-----~-~~-------~~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FAG-----EPVHFVHPNLR-GR-----T-NL-------KF 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TTT-----SBGGGTCGGGT-TT-----C-CC-------BC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hhC-----chhHHhCchhc-Cc-----c-cc-------cc
Confidence 54 58999999 999999999999999999999999852 222 45788888776 32 1 11 12
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCC---C-----------------CeEEeec-
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD---A-----------------PMFVVGV- 137 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d---~-----------------p~~V~gv- 137 (218)
.+++ .| .++|+||+|+|.+.+.+.++.|+++|++ ||+.+++. . +.+|+|+
T Consensus 61 ---~~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvp 131 (345)
T 2ozp_A 61 ---VPPE--KL--EPADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVP 131 (345)
T ss_dssp ---BCGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCH
T ss_pred ---cchh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEecc
Confidence 1122 36 3899999999999999999999999984 56666531 1 3677777
Q ss_pred --CccccCCCCCEEEcCChhhhhHHHHHHHHHhhcCee--EEEEEEEeccCCCCcc-ccCCCCCCccccccccccCcccc
Q 027805 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT-VDGPSSKDWRGLACFEWKTDWYG 212 (218)
Q Consensus 138 --N~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~~fgI~--~~~~Ttvha~t~~Q~~-~D~~~~~d~r~~r~a~~~~~~~~ 212 (218)
|++.++. .++||||||+|||++|.+++|+++|+|+ ++.|||+|++|++|+. +|.++ +++ +.+|+--|+
T Consensus 132 E~n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~n~~py~ 204 (345)
T 2ozp_A 132 ELYREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HPE-----RAGSIRVYK 204 (345)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HHH-----HTTCCEEEE
T ss_pred ccCHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-chh-----hccccccCC
Confidence 9999975 6899999999999999999999999999 9999999999999965 67654 232 356665554
Q ss_pred c
Q 027805 213 F 213 (218)
Q Consensus 213 ~ 213 (218)
.
T Consensus 205 ~ 205 (345)
T 2ozp_A 205 P 205 (345)
T ss_dssp C
T ss_pred C
Confidence 3
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.93 E-value=7.9e-26 Score=205.58 Aligned_cols=153 Identities=18% Similarity=0.319 Sum_probs=125.6
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 3 KVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
++||||+| .|.+|+.++|.+.++ |.++++.+.... | .|+.+.+.|+.+.+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-------------s-------------aG~~~~~~~~~~~~- 54 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-------------S-------------AGKSLKFKDQDITI- 54 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-------------T-------------TTCEEEETTEEEEE-
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-------------c-------------CCCcceecCCCceE-
Confidence 48999999 999999999988887 777777765431 1 12235566666665
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCCCCEEEcCCh
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPELNIVSNASC 154 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~~~IIs~aSC 154 (218)
++.+++. |. ++|+||+|+|.+.+++.++.|+++|+ ++|+.+++ ++|++|||||++.++...++||||||
T Consensus 55 ~~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC 128 (366)
T 3pwk_A 55 EETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGV--VVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNC 128 (366)
T ss_dssp EECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCH
T ss_pred eeCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCC--EEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCc
Confidence 3344444 32 89999999999999999999999999 46777653 47999999999999765689999999
Q ss_pred hhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCc
Q 027805 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQK 188 (218)
Q Consensus 155 tT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~ 188 (218)
+|||++|++++|+++|||+++.|||+|++|+.-+
T Consensus 129 ~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~ 162 (366)
T 3pwk_A 129 STIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGM 162 (366)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEEEeccccCc
Confidence 9999999999999999999999999999999864
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.93 E-value=1.9e-25 Score=201.66 Aligned_cols=153 Identities=24% Similarity=0.401 Sum_probs=125.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcC--CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~--~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+||||+| .|.+|+.++|.+.++ |.++++.+... .| -| +.+.+.|+.+.+ +
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~~-aG------------~~~~~~~~~~~~-~ 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------RS-QG------------RKLAFRGQEIEV-E 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT-SS------------CEEEETTEEEEE-E
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------cc-CC------------CceeecCCceEE-E
Confidence 6999999 999999999988887 77777776542 11 12 235566766665 3
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCc-cccCCC-CCEEEcCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNE-NEYKPE-LNIVSNAS 153 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~-~~~~~~-~~IIs~aS 153 (218)
+.+++. | .++|+||+|+|.+.+++.++.|+++|+ +||+.+++ |+|++|||||+ +.++.. .++|||||
T Consensus 55 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 55 DAETAD--P--SGLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp ETTTSC--C--TTCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred eCCHHH--h--ccCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 334444 4 289999999999999999999999999 57888863 57999999999 888753 58999999
Q ss_pred hhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCcc
Q 027805 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKT 189 (218)
Q Consensus 154 CtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~ 189 (218)
|+|||++|++++|+++|||+++.|||+|++|+.-+-
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~ 164 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLA 164 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHH
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCccChh
Confidence 999999999999999999999999999999987543
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.93 E-value=1.3e-26 Score=211.10 Aligned_cols=153 Identities=17% Similarity=0.153 Sum_probs=119.2
Q ss_pred cEEEEEc-cChhHHHHHH-HHHcCC--CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 4 VKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r-~~~~~~--~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
+||||+| +|.+|+.++| .+.++| .++++.+.... -|+-- . .+.|+.+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~---------------aG~~~-~----------~~~~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ---------------IGVPA-P----------NFGKDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS---------------TTSBC-C----------CSSSCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc---------------cCcCH-H----------HhCCCceEEE
Confidence 4899999 9999999999 777877 56776665421 12110 0 0222222221
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEEE
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIVS 150 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~--~--~IIs 150 (218)
...+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++||
T Consensus 55 ~~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 1112222 3 3899999999999999999999999998899999984 47999999999988642 3 4699
Q ss_pred cCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCC
Q 027805 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITAT 186 (218)
Q Consensus 151 ~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~ 186 (218)
||||||||++|++++|+++|||+++.|||+|++|+.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 166 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGA 166 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEecccc
Confidence 999999999999999999999999999999999987
No 38
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.92 E-value=2e-25 Score=202.39 Aligned_cols=182 Identities=15% Similarity=0.132 Sum_probs=130.4
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+| +|.+|+.++|.+.++|.++++.+......-..+...+.+. .+..++ .. . +.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~-----~-------~~~~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KE-----I-------ADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HH-----H-------HTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-cc-----c-------ccceE-Ee
Confidence 58999999 8999999999888999999999965421112221111000 000011 00 0 01112 22
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC---CCCCeEEeecCccccCC--C--------CCE
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps---~d~p~~V~gvN~~~~~~--~--------~~I 148 (218)
.+++.+ .++|+||+|+|.+.+++.++.|+++|++.|.+|++. ++.|++|||||.+.++. . .++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 234333 289999999999999999999999999655555543 25799999999998853 1 259
Q ss_pred EEcCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 149 Is~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||||+|+|||+++++++|+++|||+++.|||+|++|++|+. +.+ .+.++.|+--|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy 202 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPL 202 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEEC
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEee
Confidence 99999999999999999999999999999999999999988 222 13556676544
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.92 E-value=3.6e-26 Score=208.56 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=119.0
Q ss_pred ccEEEEEc-cChhHHHHHH-HHHcCC--CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 3 KVKIGING-FGRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r-~~~~~~--~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
++||||+| +|.+|+.++| .+.++| .++++.+.... -|+-. . .+.|+.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~---------------aG~~~-~----------~~~~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN---------------AGGKA-P----------SFAKNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC---------------TTSBC-C----------TTCCSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh---------------cCCCH-H----------HcCCCceEE
Confidence 47999999 9999999999 777776 56766664321 11100 0 012222222
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEE
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYKPE--L--NIV 149 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~~~--~--~II 149 (218)
....+++. | .++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|
T Consensus 58 ~~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 11112222 3 2899999999999999999999999998889999984 46999999999988642 3 459
Q ss_pred EcCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCC
Q 027805 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITAT 186 (218)
Q Consensus 150 s~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~ 186 (218)
|||||+|||++|+|++|+++|+|+++.|||+|++|+.
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 170 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGA 170 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeeccccc
Confidence 9999999999999999999999999999999999987
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.92 E-value=3e-25 Score=201.25 Aligned_cols=182 Identities=15% Similarity=0.132 Sum_probs=130.1
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+| +|.+|+.++|.+.++|.++++.+......-..+...+.+. .+..++ .. . +.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~~-----~-------~~~~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-KE-----I-------ADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-HH-----H-------HTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-cc-----c-------ccceE-Ee
Confidence 58999999 8999999999888999999999965421112221111000 000011 00 0 01112 22
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC---CCCCeEEeecCccccCC--C--------CCE
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNENEYKP--E--------LNI 148 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps---~d~p~~V~gvN~~~~~~--~--------~~I 148 (218)
.+++.+ .++|+||+|+|.+.+++.++.|+++|++.|.+|++. ++.|++|||||.+.++. . .++
T Consensus 72 ~~~~~~----~~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKLM----DDVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGGC----TTCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHHh----cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 234333 289999999999999999999999999655555543 25799999999998853 1 259
Q ss_pred EEcCChhhhhHHHHHHHHHhhcCeeEEEEEEEeccCCCCccccCCCCCCccccccccccCccc
Q 027805 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTDWY 211 (218)
Q Consensus 149 Is~aSCtT~~Lap~lk~L~~~fgI~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~~~ 211 (218)
||||+|+|||+++++++|+++|||+++.|||+|++|++|+. +.+ .+.++.|+--|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy 202 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPL 202 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEEC
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEee
Confidence 99999999999999999999999999999999999999987 222 13456666444
No 41
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.91 E-value=2.4e-25 Score=201.41 Aligned_cols=180 Identities=11% Similarity=0.029 Sum_probs=136.8
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCC-----CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~-----~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~ 74 (218)
|+++||+|+| +|++|+.++|.+.+++ .++++++++.. +... ++++.|++|. +. .+ +.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~agk-----~~~~~~~~l~-~~----~~--~~---- 69 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAGS-----TLGEHHPHLT-PL----AH--RV---- 69 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTTS-----BGGGTCTTCG-GG----TT--CB----
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCCC-----chhhhccccc-cc----ce--ee----
Confidence 5458999999 9999999999999998 89999998643 2211 1466677665 21 01 11
Q ss_pred EEEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC--C-C--------------CeEEeec
Q 027805 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--D-A--------------PMFVVGV 137 (218)
Q Consensus 75 ~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~--d-~--------------p~~V~gv 137 (218)
+ .+.+++. |. ++|+||+|+|.+.+.+.++.+ ++|++.|.+|++.. + + |..++++
T Consensus 70 ---~-~~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 70 ---V-EPTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp ---C-EECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred ---e-ccCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 1 1122222 54 899999999999999999999 99985444444432 2 2 6677777
Q ss_pred --CccccCCCCCEEEcCChhhhhHHHHHHHHHhhcCee-EEEEEEEeccCCC-CccccCCCCCCccccccccccC
Q 027805 138 --NENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITAT-QKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 138 --N~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~~fgI~-~~~~Ttvha~t~~-Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|.+.++ ..++|+||+|+|+|+++.+++|+++|+|+ ++.++|+|++|++ |+..|..+ .++|+.+..+.|+
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~ 213 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNI 213 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECST
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccC
Confidence 999987 45899999999999999999999999999 9999999999999 99998764 5677666555443
No 42
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.90 E-value=3.2e-24 Score=195.88 Aligned_cols=169 Identities=22% Similarity=0.302 Sum_probs=120.4
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC-CCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd-~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
|+++||||+| +|.+|+.++|.+.++|.++|+.+.. ....-..+... | +|. .. . .|-.+++.+.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~------~-~~~-~~-----~-~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDA------A-SWK-QT-----E-TLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHH------C-CCC-CS-----S-CCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHh------c-ccc-cc-----c-ccccccccceE
Confidence 7779999999 9999999999999999999988853 21111111111 1 010 00 0 00000011122
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-----CCCeEEeecCccccC----------
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNENEYK---------- 143 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-----d~p~~V~gvN~~~~~---------- 143 (218)
++.++++ .|. ++|+||+|+|.+.+++.++.++++|+ +||+.+++ |+|++|+++|++.|+
T Consensus 83 -~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~--~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~ 156 (381)
T 3hsk_A 83 -QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGL--AVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAV 156 (381)
T ss_dssp -EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTC--EEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHH
T ss_pred -EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCC--EEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhc
Confidence 2223331 343 89999999999999999999999999 46777653 479999999999885
Q ss_pred -----CCCCEEEcCChhhhhHHHHHHHHHhhcC-eeEEEEEEEeccCCCCcc
Q 027805 144 -----PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKT 189 (218)
Q Consensus 144 -----~~~~IIs~aSCtT~~Lap~lk~L~~~fg-I~~~~~Ttvha~t~~Q~~ 189 (218)
+..++|+||+|+|+|+++.|++|+++|| |+++.++|+|++|++|+.
T Consensus 157 ~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~ 208 (381)
T 3hsk_A 157 SKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFS 208 (381)
T ss_dssp HTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----
T ss_pred ccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCcc
Confidence 2356999999999999999999999999 999999999999999983
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.87 E-value=5.9e-23 Score=184.84 Aligned_cols=168 Identities=15% Similarity=0.162 Sum_probs=121.7
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCC---cChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPF---ITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~---~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
+||+|+| +|.+|+.+++.+.++|+++++++.... ..-+.+ ...|..|. +. ..+.+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~-~~-------------~~~~v- 63 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLK-GI-------------VELPL- 63 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGT-TT-------------CCCBE-
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCcccc-Cc-------------cceeE-
Confidence 7999999 899999999999999999999986532 000111 11121122 10 01122
Q ss_pred eec-CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC----C--CC---------------eEEeec
Q 027805 80 GVR-NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK----D--AP---------------MFVVGV 137 (218)
Q Consensus 80 ~~~-~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~----d--~p---------------~~V~gv 137 (218)
++- +++++. .++|+||+|+|.+.+++.++.|+++|+| +|+.+++ | +| ++|||+
T Consensus 64 ~~~~~~~~~~---~~~Dvvf~a~p~~~s~~~~~~~~~~g~~--vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vygl 138 (337)
T 3dr3_A 64 QPMSDISEFS---PGVDVVFLATAHEVSHDLAPQFLEAGCV--VFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGL 138 (337)
T ss_dssp EEESSGGGTC---TTCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECC
T ss_pred eccCCHHHHh---cCCCEEEECCChHHHHHHHHHHHHCCCE--EEEcCCccccCCcccchhhccccccChhhhcceEEEc
Confidence 111 333331 2899999999999999999999999994 4555543 3 21 346666
Q ss_pred ---CccccCCCCCEEEcCChhhhhHHHHHHHHHh--hcCeeEE-EEEEEeccCCCC-ccccCCCCCCcc
Q 027805 138 ---NENEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITATQ-KTVDGPSSKDWR 199 (218)
Q Consensus 138 ---N~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~--~fgI~~~-~~Ttvha~t~~Q-~~~D~~~~~d~r 199 (218)
|.+.++. .++||||+|+|||+++++++|++ .|+++++ .|+|+|++|+++ +.+|+.+ .+.|
T Consensus 139 PEvn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~ 205 (337)
T 3dr3_A 139 AEWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV 205 (337)
T ss_dssp TTTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC
T ss_pred cccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc
Confidence 9999874 68999999999999999999999 6999999 999999999996 6667554 3443
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.78 E-value=1.2e-19 Score=164.13 Aligned_cols=156 Identities=13% Similarity=0.158 Sum_probs=120.2
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+| +|.+|+.++|.+.++|.+||+.++... +... +|++.|..|. +.+.+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG~-----~~~~~~p~~~----------------~~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAGK-----KLEEIFPSTL----------------ENSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTTS-----BHHHHCGGGC----------------CCCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cccC-----ChHHhChhhc----------------cCceE-Ee
Confidence 48999999 999999999999999999999998753 1111 1233343221 11112 11
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC---CC--------------------CeEEeecC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK---DA--------------------PMFVVGVN 138 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~---d~--------------------p~~V~gvN 138 (218)
.+++++ | .++|+||.|+|...+++.++.+ +|+ +|||++++ +. |..++++|
T Consensus 70 ~~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223332 2 3799999999999999988877 677 68999974 22 56667779
Q ss_pred ccccCCCCCEEEcCChhhhhHHHHHHHHHhhcCee--EEEEEEEeccCCCCcc
Q 027805 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITATQKT 189 (218)
Q Consensus 139 ~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~~fgI~--~~~~Ttvha~t~~Q~~ 189 (218)
.+.++. .++|+||+|+|+++.+.|++|+++++|+ ++.++|+|++|++++-
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~ 194 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRK 194 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSC
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcc
Confidence 998874 4899999999999999999999999999 9999999999999873
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.70 E-value=6.9e-08 Score=85.50 Aligned_cols=155 Identities=17% Similarity=0.194 Sum_probs=95.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHc-CCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~-~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+.+++.+.+ .++++++++.|...+..-.... + .+|. .. ..++ + . .++
T Consensus 2 ~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a---~-~~g~----~~-~~~~--~--e----~ll 64 (312)
T 1nvm_B 2 NQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA---Q-RMGV----TT-TYAG--V--E----GLI 64 (312)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH---H-HTTC----CE-ESSH--H--H----HHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHH---H-HcCC----Cc-ccCC--H--H----HHH
Confidence 136999999999999999999976 8899999999984222011111 0 1110 00 0000 0 0 000
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhC--CCCEEEEeCCCC-CCCeEEeecCccccCC--CCCEEEcCCh
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISAPSK-DAPMFVVGVNENEYKP--ELNIVSNASC 154 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~--GakkViis~ps~-d~p~~V~gvN~~~~~~--~~~IIs~aSC 154 (218)
++..| .++|+|++|||.....+.+...+++ |. .|++..+. -.|..++.+|.+.... ...+++++.|
T Consensus 65 -----~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~ 135 (312)
T 1nvm_B 65 -----KLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQ 135 (312)
T ss_dssp -----HSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHH
T ss_pred -----hccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCc
Confidence 11112 3789999999988888888888888 76 44554332 2567777788776532 2245655555
Q ss_pred hhhhHHHHHHHHHhhcCeeEE-EEEEEeccC
Q 027805 155 TTNCLAPLAKVIHDKFGIVEG-LMTTVHSIT 184 (218)
Q Consensus 155 tT~~Lap~lk~L~~~fgI~~~-~~Ttvha~t 184 (218)
+..|++..+.+.|..... .+.++.+.+
T Consensus 136 ---~~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 136 ---ATIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp ---HHHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred ---ccchHHHHhhhhccchhHhHhhhhhccc
Confidence 456888888888876543 456665544
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.44 E-value=4.1e-07 Score=80.31 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=67.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|+++||||+|+|++|+.+++.+.+.++++++++.|+..+ +.+ . +| +.++
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~-~~~----~----~g---------------------v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRAT-LDT----K----TP---------------------VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSC-CSS----S----SC---------------------EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHH-Hhh----c----CC---------------------Ccee-
Confidence 778999999999999999999998889999999997421 111 0 11 1111
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++. .++|+|++||+.....+.+...+++|. .||++.|.
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 2233332 278999999999888888888998885 67776663
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.38 E-value=1.1e-06 Score=77.09 Aligned_cols=91 Identities=20% Similarity=0.253 Sum_probs=62.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|+++||||+|+|+||+.+++++.+.+++++++|.|+ +++.... +|. . ...
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g~----~---------------~~~-- 56 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------ELQ----P---------------FRV-- 56 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT----T---------------SCE--
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cCC----C---------------cCC--
Confidence 446899999999999999999988889999999997 3332210 110 0 000
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
..+..+. .++|+|+.||+.....+.+...+++|. .|+...|
T Consensus 57 ~~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 57 VSDIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp ESSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 1122222 278999999999999999999998886 5665444
No 48
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.22 E-value=2.7e-06 Score=75.64 Aligned_cols=95 Identities=21% Similarity=0.353 Sum_probs=67.1
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+. +++++...++++|++|.|+ +.+..+.. | + + ++ ++
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~--~-------~-~-~~---------------~~ 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD--F-------P-D-AE---------------VV 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH--C-------T-T-SE---------------EE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh--C-------C-C-Cc---------------eE
Confidence 34689999999999996 7888877889999999998 44432111 1 1 0 01 10
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (358)
T 3gdo_A 55 --HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKPM 98 (358)
T ss_dssp --SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESSC
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecCC
Confidence 122221 11237899999999999999999999999 578887773
No 49
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.20 E-value=2.7e-06 Score=75.81 Aligned_cols=96 Identities=23% Similarity=0.339 Sum_probs=68.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|+++||||+|+|.||+.+++++...++++|++|.|+ +.+.....-+ +|. . ++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~----~g~-~--------------------~~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQ----KGL-K--------------------IY- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHT----TTC-C--------------------BC-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHh----cCC-c--------------------ee-
Confidence 346899999999999999999888889999999998 4444321111 110 0 00
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 111111 11237899999999999999999999998 578887774
No 50
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.16 E-value=3.6e-06 Score=74.88 Aligned_cols=99 Identities=24% Similarity=0.244 Sum_probs=68.1
Q ss_pred CCccEEEEEccChhHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~-~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
||++||||+|+|.||+.+++++. ..+++++++|.|+. .+....+.+ .+|. .+ +.+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~--~~~~~~~a~---~~g~----~~---------------~~~ 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV--AGRAQAALD---KYAI----EA---------------KDY 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS--TTHHHHHHH---HHTC----CC---------------EEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC--HHHHHHHHH---HhCC----CC---------------eee
Confidence 66799999999999999999998 67899999999984 333211110 0110 00 011
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 77 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 77 --NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp --SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 111111 11236899999999999999999999999 578887774
No 51
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.14 E-value=4.5e-06 Score=74.20 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=66.9
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+. +++++...++++|++|.|+. ++..+ ..+ + +. . ++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~------~~~---~-~~-~---------------~~ 54 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS--KELSK------ERY---P-QA-S---------------IV 54 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS--CCGGG------TTC---T-TS-E---------------EE
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHH------HhC---C-CC-c---------------eE
Confidence 34689999999999996 88888888899999999984 33321 101 1 00 1 11
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 98 (362)
T 3fhl_A 55 --RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKPF 98 (362)
T ss_dssp --SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred --CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 1222221 1236899999999999999999999998 478887773
No 52
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.13 E-value=6.4e-06 Score=72.89 Aligned_cols=94 Identities=23% Similarity=0.389 Sum_probs=66.8
Q ss_pred CC-ccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 1 m~-~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
|+ ++||||+|+|.+|+. +++++...++++|++|.|+ +++... ..+ . +. . +
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~------~~~---~-~~-~---------------~ 55 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH------ADW---P-AI-P---------------V 55 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH------TTC---S-SC-C---------------E
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH------hhC---C-CC-c---------------e
Confidence 53 589999999999996 8888888889999999998 444432 001 1 00 0 0
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
+ .+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 56 V--SDPQML-FNDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp E--SCHHHH-HHCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred E--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 0 112111 11236899999999999999999999999 57888777
No 53
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.10 E-value=5.3e-06 Score=73.35 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=67.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+++||||+|+|.||+.+++++...+++++++|.|+ +.+....+.+ .+|. .. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~----~~-~------------------ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC----AG-D------------------ 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC----CC-C------------------
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC----CC-c------------------
Confidence 46899999999999999999988889999999998 4443322211 0110 00 0
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++.-|.
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 111111 11236899999999998889998999998 568887773
No 54
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.08 E-value=5.7e-06 Score=72.87 Aligned_cols=97 Identities=28% Similarity=0.412 Sum_probs=67.1
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
|++||||+|+|.||+.+++++...+++++++|.|+ +.+....+.+ .+|. . + ++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~----~-~---------------~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV----E-K---------------AY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC----S-E---------------EE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC----C-c---------------ee--
Confidence 24899999999999999999988889999999998 4443322211 0110 0 0 00
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 111111 11237899999999998888888899998 578888773
No 55
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.07 E-value=5.3e-06 Score=72.73 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=66.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|+++||||+|+|.||+.+++++...+++++++|.|+. ++....+. ..+|. . ..+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~--~~~~~~~a---~~~~~----~----------------~~~- 56 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT--LESAQAFA---NKYHL----P----------------KAY- 56 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC--SSTTCC------CCCC----S----------------CEE-
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC--HHHHHHHH---HHcCC----C----------------ccc-
Confidence 3468999999999999999998887899999999973 33221110 00110 0 011
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 100 (329)
T 3evn_A 57 -DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKPF 100 (329)
T ss_dssp -SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred -CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccCC
Confidence 1122211 1237899999999999999999999998 478887774
No 56
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.07 E-value=7.8e-06 Score=72.10 Aligned_cols=98 Identities=21% Similarity=0.206 Sum_probs=64.7
Q ss_pred CCccEEEEEccChhHHHHHHHHH-------cCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECC
Q 027805 1 MGKVKIGINGFGRIGRLVARVIL-------QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~-------~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g 73 (218)
|+++||||+|+|+||+.+++++. +.++++||||+|+. .+....+.+ .|| .. +
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~--~~~a~~~a~---~~g----~~-~----------- 81 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN--AGLAEARAG---EFG----FE-K----------- 81 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHT----CS-E-----------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC--HHHHHHHHH---HhC----CC-e-----------
Confidence 67799999999999999888763 24678999999984 333222211 111 00 0
Q ss_pred EEEEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 74 ~~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++|. .|++--|-
T Consensus 82 ----~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKPl 127 (393)
T 4fb5_A 82 ----AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKPM 127 (393)
T ss_dssp ----EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred ----ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccCC
Confidence 00 111111 112378999999999999999999999986 67877774
No 57
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=98.06 E-value=3.2e-06 Score=74.52 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=68.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-------ceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~-------~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g 73 (218)
|+++||||+|+|.||+.+++++...|+ .+|+||+|+ +++....+.+ .|| .. +
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~---~~g----~~-~----------- 62 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG---KLG----WS-T----------- 62 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH---HHT----CS-E-----------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH---HcC----CC-c-----------
Confidence 778999999999999999998865543 499999998 4544322211 111 00 0
Q ss_pred EEEEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 74 ~~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++| |.|++--|-
T Consensus 63 ----~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 108 (390)
T 4h3v_A 63 ----TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPL 108 (390)
T ss_dssp ----EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred ----cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCc
Confidence 10 112211 11237899999999999999999999999 478888874
No 58
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.06 E-value=5.4e-06 Score=72.57 Aligned_cols=94 Identities=29% Similarity=0.356 Sum_probs=67.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||+|+|.||+.+++++.+.+++++++|.|+ +.+....+.+ .+| + + . .
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~--------------~-----~--~---~ 53 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG---AYG--------------C-----E--V---R 53 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTT--------------C-----E--E---C
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH---HhC--------------C-----C--c---C
Confidence 5899999999999999999988889999999998 4443322211 011 0 0 0 1
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
+++++ ..+.++|+|+-||+.....+.+...+++| |.|++.-|.
T Consensus 54 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 96 (331)
T 4hkt_A 54 TIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKPI 96 (331)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecCC
Confidence 11111 11236899999999999999999999998 578887773
No 59
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.06 E-value=8.8e-06 Score=71.56 Aligned_cols=97 Identities=24% Similarity=0.365 Sum_probs=67.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
++++||||+|+|.||+.+++++...+++++++|.|. +.+....+.+ .+| +. ++
T Consensus 2 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g------~~---------------~~- 54 (344)
T 3euw_A 2 SLTLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG------AE---------------AV- 54 (344)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT------CE---------------EE-
T ss_pred CCceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC------Cc---------------ee-
Confidence 035899999999999999999998889999999998 4443322211 111 00 11
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++..|.
T Consensus 55 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 98 (344)
T 3euw_A 55 -ASPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKPI 98 (344)
T ss_dssp -SSHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSCS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECCC
Confidence 112111 11237899999999999999999999998 468887773
No 60
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.05 E-value=4.5e-06 Score=73.30 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=67.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|+++||||+|+|.||+.+++++.+.+++++++|.|+. .+....+.+ .+|. + +. +
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~--~~~~~~~~~---~~~~-~----~~-------~--------- 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRR--LENAQKMAK---ELAI-P----VA-------Y--------- 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSS--SHHHHHHHH---HTTC-C----CC-------B---------
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCC--HHHHHHHHH---HcCC-C----ce-------e---------
Confidence 4468999999999999999999888899999999984 333222211 0110 0 00 0
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 100 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKPF 100 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSSC
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 111111 01236899999999999889988899998 468887773
No 61
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=98.05 E-value=4.3e-06 Score=73.79 Aligned_cols=90 Identities=21% Similarity=0.288 Sum_probs=65.8
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr-~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.||+ .+++++...++++|++|+|+. .+. +| +. .+
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~~----------~g------~~---------------~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GTV----------EG------VN---------------SY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CCC----------TT------SE---------------EE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hhh----------cC------CC---------------cc
Confidence 5569999999999999 799999988999999999984 211 11 00 00
Q ss_pred eecCCCCCCccC-CCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~-~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+ .++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 70 --~~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 114 (330)
T 4ew6_A 70 --TTIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPP 114 (330)
T ss_dssp --SSHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred --CCHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 111111 011 26899999999988889999999999 578887774
No 62
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=98.05 E-value=9e-06 Score=74.45 Aligned_cols=104 Identities=24% Similarity=0.317 Sum_probs=68.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhee-eccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~k-ydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.||+.+++++...++++|++|+|+ +++....+.+ +.. +|. + + .+++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~~-~g~-~--------~---------~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILKK-NGK-K--------P---------AKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHHH-TTC-C--------C---------CEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHHh-cCC-C--------C---------Ccee
Confidence 456899999999999999999888889999999998 4443322211 000 110 0 0 0111
Q ss_pred e--ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~--~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
. +.+.+++ ..+..+|+|+-||+.....+.+...+++|. .|++--|.
T Consensus 77 ~~~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP~ 124 (444)
T 2ixa_A 77 GNGNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVSG 124 (444)
T ss_dssp CSSTTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCCC
T ss_pred ccCCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 1 0122222 122378999999999988899999999985 67776664
No 63
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.01 E-value=1.1e-05 Score=72.05 Aligned_cols=92 Identities=22% Similarity=0.326 Sum_probs=65.1
Q ss_pred ccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+|+|.+|+. +++++...++++|++|.|+ +.+.... + +. +. .. +
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~-~~-~~-------~---------- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LP-DV-TV-------I---------- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CT-TS-EE-------E----------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CC-CC-cE-------E----------
Confidence 589999999999996 8888888889999999998 4443321 0 11 10 10 0
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 57 ~~~~~l-l~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAA-VQHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp SCHHHH-HTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11237899999999999999999999998 46777766
No 64
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.00 E-value=1.2e-05 Score=70.82 Aligned_cols=98 Identities=20% Similarity=0.261 Sum_probs=67.5
Q ss_pred CccEEEEEccChhHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~-~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|++||||+|+|.||+.+++++. ..+++++++|.|+ +.+....+. ..+|. .+. ++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~---~~~g~----~~~---------------~~- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVV---EQYQL----NAT---------------VY- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHH---HHTTC----CCE---------------EE-
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCC----CCe---------------ee-
Confidence 2489999999999999999998 6789999999998 444332221 11110 000 11
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 56 -PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp -SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 111111 01236899999999999999999999999 578887773
No 65
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.00 E-value=1.3e-05 Score=71.31 Aligned_cols=98 Identities=17% Similarity=0.253 Sum_probs=67.3
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.||+. +++++...+++++++|.|+ +++....+.+ .+| .. . ++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~----~~-~---------------~~ 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR---FIS----DI-P---------------VL 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG---TSC----SC-C---------------EE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---hcC----CC-c---------------cc
Confidence 34589999999999995 8899888889999999998 4544322211 011 00 0 00
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|-
T Consensus 58 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 101 (359)
T 3m2t_A 58 --DNVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKPP 101 (359)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSCS
T ss_pred --CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECCC
Confidence 112221 112368999999999888898889999984 68887774
No 66
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.98 E-value=8.8e-06 Score=69.69 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|+|+||+|+|+|++|+.+++.+.+.++ +|+++.|..
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 656899999999999999999999999 999999874
No 67
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.97 E-value=1.4e-05 Score=70.77 Aligned_cols=97 Identities=23% Similarity=0.331 Sum_probs=66.0
Q ss_pred CccEEEEEccChhHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG~GrIGr-~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|++||||+|+|.+|+ .+++.+...++++|++|.|+. ..+.++-. | |. + + ++++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~--~----~~-~--------~---------~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAP--F----KE-K--------G---------VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHH--H----HT-T--------T---------CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHh--h----CC-C--------C---------CeEE-
Confidence 248999999999998 688878788899999999984 22222111 1 10 0 0 0111
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 1222221 1236899999999999999999999999 578887773
No 68
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.96 E-value=1.4e-05 Score=71.16 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC------CCceEEEEeCCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPF 37 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~------~~~~vvaInd~~ 37 (218)
|+++||||+|+|.||+.+++.+.+. ++++|++|.|..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~ 44 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSR 44 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecC
Confidence 7789999999999999999998765 689999999974
No 69
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.95 E-value=2.1e-06 Score=74.76 Aligned_cols=170 Identities=23% Similarity=0.246 Sum_probs=94.9
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|.++||+|+| +|++|+.+++.+.+.++++||++.|...+ +. .|+.. +++ -+ +.- | +.+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~-~~----------~G~d~-gel---~g--~~~-g--v~v- 63 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS-PQ----------LGQDA-GAF---LG--KQT-G--VAL- 63 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC-TT----------TTSBT-TTT---TT--CCC-S--CBC-
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc-cc----------ccccH-HHH---hC--CCC-C--cee-
Confidence 6679999999 99999999999999999999999887421 11 11111 110 00 000 1 111
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccc---c---CCCCCEEE--c
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE---Y---KPELNIVS--N 151 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~---~---~~~~~IIs--~ 151 (218)
..|.+++. .++|+|||+|......+.+...++.|.+ +|+.... .+.+. + .....++- |
T Consensus 64 -~~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG---------~s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 64 -TDDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTG---------FSEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp -BCCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCC---------CCHHHHHHHHHHTTTSEEEECSC
T ss_pred -cCCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCC---------CCHHHHHHHHHHhccCCEEEECC
Confidence 12222211 1579999999877777888888888884 5553322 11221 1 11223443 3
Q ss_pred CChhhhhHHHHHHHHHhhcC-eeEEEEEEEeccCCCCccccCCCCCCccccccccccCc
Q 027805 152 ASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKTD 209 (218)
Q Consensus 152 aSCtT~~Lap~lk~L~~~fg-I~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~~ 209 (218)
-|=-.|-|.-+++..-+.|+ =-.+.+.-.|- .|| +|.||+.-++.+.+.+++.+
T Consensus 130 ~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH---~~K-~DaPSGTA~~la~~i~~~~~ 184 (272)
T 4f3y_A 130 MSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHH---RHK-VDAPSGTALMMGETIAAATG 184 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSCEEEEEEEEC---TTC-CSSSCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHHhcCcCCCEEEEEecC---CCC-CCCCCHHHHHHHHHHHHHhC
Confidence 34445555555555555553 01334454553 233 58888665555555544433
No 70
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.95 E-value=1.1e-05 Score=70.15 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=63.7
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+. +++.+...+++++++|.|+. .+....+. ..+| + + +
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~---~~~g--------------~-----~--~- 55 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPIC---ESWR--------------I-----P--Y- 55 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHH---HHHT--------------C-----C--B-
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHH---HHcC--------------C-----C--c-
Confidence 34689999999999996 88988888889999999984 33221111 0011 0 0 0
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
..+++.+ +.++|+|+.||+.....+.+...+++|. .|++.-|.
T Consensus 56 -~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP~ 98 (319)
T 1tlt_A 56 -ADSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKPL 98 (319)
T ss_dssp -CSSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESSS
T ss_pred -cCcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCCC
Confidence 0112222 1378999999998888888888888885 57776663
No 71
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.95 E-value=1.3e-05 Score=71.14 Aligned_cols=97 Identities=12% Similarity=0.139 Sum_probs=67.3
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr-~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.||+ .+++++...+++++++|.|+ +.+....+.+ .+| + ..+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g--------------~-------~~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RFG--------------G-------EPV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HHC--------------S-------EEE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---HcC--------------C-------CCc
Confidence 5568999999999998 78999988889999999997 4443322111 011 0 000
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|-
T Consensus 79 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~ 122 (350)
T 3rc1_A 79 --EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKPL 122 (350)
T ss_dssp --ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSS
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCCC
Confidence 112111 112378999999999999999999999985 68887773
No 72
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.94 E-value=1.8e-05 Score=68.58 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=66.0
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+. +++++.+.+++++++|.|+ +.+....+.+ .+|. .. +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~----~~---------~-------- 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI----MP---------F-------- 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC----CB---------C--------
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC----CC---------c--------
Confidence 56789999999999996 8888888889999999998 4443322211 0110 00 0
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++.-|.
T Consensus 58 --~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 --DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp --SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred --CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1111111 1 68999999999999999988999985 57777674
No 73
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.93 E-value=1.6e-05 Score=69.82 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=65.7
Q ss_pred ccEEEEEccChhHHHH-HHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~-~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
|+||||+|+|.||+.+ +.++...|+++|+||+|+ +++....+.+ .|| .. + ++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g----~~-~---------------~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMAD---RFS----VP-H---------------AF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHH---HHT----CS-E---------------EE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcC----CC-e---------------ee--
Confidence 5899999999999864 677778899999999998 4543322211 111 00 0 00
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.|.+++ ..+.++|.|+=||+.....+.+...+++|. .|++--|-
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKPl 119 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKPL 119 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSCC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCCc
Confidence 111111 112378999999999999999999999984 78887774
No 74
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.93 E-value=1.8e-05 Score=69.27 Aligned_cols=97 Identities=19% Similarity=0.278 Sum_probs=65.5
Q ss_pred CccEEEEEccChhHHHHHHHHH-cCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~-~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+++||||+|+|.||+.+++.+. ..+++++++|.|+ +.+....+. ..+|. . .++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a---~~~g~----~----------------~~~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAK---NELGV----E----------------TTY- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHH---HTTCC----S----------------EEE-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHH---HHhCC----C----------------ccc-
Confidence 3589999999999999999988 7788999999997 444332211 01110 0 010
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+.||+.....+.+...+++| |.|++..|.
T Consensus 61 -~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp~ 104 (346)
T 3cea_A 61 -TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKPL 104 (346)
T ss_dssp -SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred -CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCCC
Confidence 111111 01136899999999988888888889988 467776563
No 75
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.92 E-value=1.8e-05 Score=69.74 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=63.6
Q ss_pred ccEEEEEccChhHHH-HHH-HHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 3 ~~kvgInG~GrIGr~-~~r-~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
++||||+|+|.||+. +++ .+...++++|++|.|+.. +.....-+ +. + + +++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~--~~~~~~~~-------~~-~-~---------------~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHA--KPEEQAPI-------YS-H-I---------------HFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSC--CGGGGSGG-------GT-T-C---------------EEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCH--hHHHHHHh-------cC-C-C---------------ceE-
Confidence 489999999999985 777 445678999999999843 22111111 11 0 0 111
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 122222 11236899999999999999999999998 577776664
No 76
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.91 E-value=2.7e-05 Score=67.89 Aligned_cols=94 Identities=20% Similarity=0.259 Sum_probs=65.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||+|+|.||+.+++.+.+.+++++++|.|+ +.+....+. ..+|. . .++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~---~~~~~-----~---------------~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFA---SRYQN-----I---------------QLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHG---GGSSS-----C---------------EEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcCC-----C---------------eEe--CC
Confidence 799999999999999999988888999999997 444332211 11110 0 111 12
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
++++- +.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP~ 95 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKPA 95 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESSC
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecCC
Confidence 22221 2378999999999888888888898884 67776663
No 77
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.90 E-value=2.1e-05 Score=68.93 Aligned_cols=97 Identities=21% Similarity=0.195 Sum_probs=66.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC--CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~--~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|++||||+|+|.||+.+++++...+ ++++++|.|+ +.+....+. ..+|. . + ++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a---~~~~~----~-~---------------~~ 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFA---QKHDI----P-K---------------AY 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHH---HHHTC----S-C---------------EE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHH---HHcCC----C-c---------------cc
Confidence 2489999999999999999887765 4799999998 444332221 11110 0 0 00
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 56 --~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 --GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp --SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred --CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 111111 11236899999999999999999999999 578888774
No 78
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.89 E-value=6.2e-06 Score=72.47 Aligned_cols=169 Identities=23% Similarity=0.174 Sum_probs=92.4
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+++||+|+| +|++||.+++.+.+.|+++||++.|...+ +. .|+-. +++ .+ +.-.| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~-~~----------~G~d~-gel---~G--~~~~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS-SF----------VDKDA-SIL---IG--SDFLG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC-TT----------TTSBG-GGG---TT--CSCCS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-cc----------cccch-HHh---hc--cCcCC--ceee-
Confidence 358999999 99999999999999999999999997421 11 11111 110 00 00001 1221
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccc---cC---CCCCEEE--cC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE---YK---PELNIVS--NA 152 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~---~~---~~~~IIs--~a 152 (218)
.|++++. .++|+|||.|......+.+...++.|.. ||+....- +.+. +. ....++- |-
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vViGTTG~---------~~e~~~~L~~aa~~~~~~~a~N~ 145 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HIIGTTGF---------SKTEEAQIADFAKYTTIVKSGNM 145 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCC---------CHHHHHHHHHHHTTSEEEECSCC
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCC---------CHHHHHHHHHHhCcCCEEEECCC
Confidence 2333322 1689999999877777888888889884 44432211 1111 11 1233433 33
Q ss_pred ChhhhhHHHHHHHHHhhcC-eeEEEEEEEeccCCCCccccCCCCCCccccccccccC
Q 027805 153 SCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITATQKTVDGPSSKDWRGLACFEWKT 208 (218)
Q Consensus 153 SCtT~~Lap~lk~L~~~fg-I~~~~~Ttvha~t~~Q~~~D~~~~~d~r~~r~a~~~~ 208 (218)
|=-.|-|.-+++-+-+.|+ ==.+.+.-.|- .|| +|.||+.-++.+.+.+++.
T Consensus 146 SiGv~ll~~l~~~aa~~l~~~~dieIiE~HH---~~K-~DaPSGTA~~la~~i~~~~ 198 (288)
T 3ijp_A 146 SLGVNLLANLVKRAAKALDDDFDIEIYEMHH---ANK-VDSPSGTALLLGQAAAEGR 198 (288)
T ss_dssp CHHHHHHHHHHHHHHHHSCTTSEEEEEEEEC---TTC-CCSSCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCEEEEEccC---CCC-CCCCCHHHHHHHHHHHHHh
Confidence 4444555455555544443 00233444443 244 5888765555555444433
No 79
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.89 E-value=2.2e-05 Score=68.08 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=64.7
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||+|+|+ |++|+.+++.+.+.++++|+++.|.. .+.. .--| .|.+. +. .. .| +.++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~--~~~~---~g~d--~~~~~-g~---~~------~~--v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE--GSSL---LGSD--AGELA-GA---GK------TG--VTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT--TCTT---CSCC--TTCSS-SS---SC------CS--CCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC--chhh---hhhh--HHHHc-CC---Cc------CC--ceec
Confidence 34689999997 99999999999888899999998863 2110 0001 01111 00 00 01 2222
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
.+.+++- .++|+|+|+|......+.+...+++|.. ||+..+
T Consensus 64 --~dl~~~l---~~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 --SSLDAVK---DDFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp --SCSTTTT---TSCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred --CCHHHHh---cCCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 3444432 1689999999877777888888899874 666444
No 80
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.89 E-value=1e-05 Score=73.01 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=66.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--------CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCE
Q 027805 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~--------~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~ 74 (218)
++||||+|+|.||+.+++++.+. ++++||||+|+ +++....+.+ .|| .. +
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~----~~-~------------ 83 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLG----AE-K------------ 83 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHT----CS-E------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcC----CC-e------------
Confidence 58999999999999999888643 36899999998 4444322211 111 00 0
Q ss_pred EEEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 75 ~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
++ .|.+++ ..+.++|+|+=||+.....+.+...+++| |.|++--|-
T Consensus 84 ---~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~ 129 (412)
T 4gqa_A 84 ---AY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPL 129 (412)
T ss_dssp ---EE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred ---EE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCC
Confidence 00 111111 12237899999999999999999999999 478888884
No 81
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.88 E-value=2.4e-05 Score=69.84 Aligned_cols=88 Identities=23% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC--------CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEEC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~--------~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~ 72 (218)
|+++||||+|+|.||+.+++.+.+.+ ++++++|.|.. ++.. .+ +. . . .
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~~~---------~~-~~-~------~--~--- 56 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PRKP---------RA-IP-Q------E--L--- 56 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TTSC---------CS-SC-G------G--G---
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HHHh---------hc-cC-c------c--c---
Confidence 66799999999999999999998776 68999999963 2110 00 01 0 0 0
Q ss_pred CEEEEEEeecCCCCCCccCCCccEEEeeCCccc-CHHhHHHHHhCCCCEEEEeC
Q 027805 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT-DKDKAAAHLKGGAKKVIISA 125 (218)
Q Consensus 73 g~~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~-~~~~a~~h~~~GakkViis~ 125 (218)
+ ..|++++- .+|+|+||||... ..+.+...+++|. -|+++
T Consensus 57 -----~--~~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 57 -----L--RAEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp -----E--ESSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred -----c--cCCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 1 12455544 7899999999763 4567777888886 34553
No 82
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.88 E-value=3.9e-05 Score=70.15 Aligned_cols=102 Identities=13% Similarity=0.086 Sum_probs=67.8
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr-~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|+ .+++.+...+++++++|.|+ +.+....+. ..+|.-. .. +.+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a---~~~g~~~-~~---------------~~~- 138 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVA---AEYGVDP-RK---------------IYD- 138 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHH---HHTTCCG-GG---------------EEC-
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCCCc-cc---------------ccc-
Confidence 4568999999999997 89998888788999999998 444332211 1111100 00 011
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
..+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 139 -~~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKPl 183 (433)
T 1h6d_A 139 -YSNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKPM 183 (433)
T ss_dssp -SSSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred -cCCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCCC
Confidence 12233321 12378999999999988898988999984 67776664
No 83
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.88 E-value=2.3e-05 Score=69.48 Aligned_cols=100 Identities=13% Similarity=0.199 Sum_probs=66.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+++||||+|+|.||+.+++++...+++++++|.|+ +.+....+. ..+|..+ .+ .++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a---~~~~~~~--~~---------------~~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFA---TANNYPE--ST---------------KIH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHH---HHTTCCT--TC---------------EEE--
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHH---HHhCCCC--CC---------------eee--
Confidence 46899999999999999999988889999999997 444322211 1121000 00 011
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 61 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP~ 104 (362)
T 1ydw_A 61 GSYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKPV 104 (362)
T ss_dssp SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSSC
T ss_pred CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecCC
Confidence 111111 112368999999999988898888898884 67776663
No 84
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.85 E-value=4.2e-05 Score=67.55 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=66.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~-~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+|+|.||+.+++++... +++++++|.|+ +.+....+.+ .+| + +.+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~------~---------------~~~-- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG------A---------------RGH-- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC------C---------------EEE--
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC------C---------------cee--
Confidence 58999999999999999999887 79999999998 4443322211 011 0 111
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 108 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPM 108 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCC
Confidence 112221 11237899999999998888888899998 578877773
No 85
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.83 E-value=2.2e-05 Score=68.32 Aligned_cols=93 Identities=20% Similarity=0.285 Sum_probs=65.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||||+|+|.+|+.+++.+.+.++++++++.|+ +.+....+ . . . +..+ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~~----------~--------~-~-------~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLALV----------P--------P-G-------CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTTC----------C--------T-T-------CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHH----------H--------h-h-------Cccc--C
Confidence 5899999999999999999988888999999997 44432111 1 0 0 1111 1
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
+++++- .+.++|+|+.||+.....+.+...+++| |.|++.-|.
T Consensus 60 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP~ 102 (315)
T 3c1a_A 60 DWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKPL 102 (315)
T ss_dssp STHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCCC
Confidence 222221 1237899999999988888888888888 467776664
No 86
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.80 E-value=3.6e-05 Score=71.33 Aligned_cols=93 Identities=16% Similarity=0.269 Sum_probs=60.7
Q ss_pred CccEEEEEccChhHHHHHHHHHc---------CCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEEC
Q 027805 2 GKVKIGINGFGRIGRLVARVILQ---------RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~---------~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~ 72 (218)
+++||||+|+|.||+.+++.+.+ .++++|++|.|. +.+....++ + +. .+.
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~--------~~-~~~-------- 67 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--G--------GL-PLT-------- 67 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--T--------TC-CEE--------
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--c--------cC-ccc--------
Confidence 46899999999999999887753 268999999997 333221110 0 00 000
Q ss_pred CEEEEEEeecCCCCCCccCCCccEEEeeCCc-ccCHHhHHHHHhCCCCEEEEeCC
Q 027805 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 73 g~~i~v~~~~~p~~i~W~~~gvDiVve~tg~-f~~~~~a~~h~~~GakkViis~p 126 (218)
.|++++ ..+..+|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 68 ---------~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 68 ---------TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp ---------SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred ---------CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 112111 112378999999996 677788888999986 5555555
No 87
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.78 E-value=3.3e-05 Score=66.99 Aligned_cols=90 Identities=17% Similarity=0.253 Sum_probs=63.7
Q ss_pred CccEEEEEccChhHHHHHHHHHc---CCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~---~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
+++||||+|+|.||+.+++.+.. .+++++++|.|.. . . ...+ + + + .
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~--~------a~~~------------g--~-----~--~ 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E--L------GSLD------------E--V-----R--Q 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C--C------CEET------------T--E-----E--B
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H--H------HHHc------------C--C-----C--C
Confidence 36899999999999999998875 5789999999862 1 0 0001 1 1 0 0
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 55 ---~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 98 (294)
T 1lc0_A 55 ---ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYPM 98 (294)
T ss_dssp ---CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESCS
T ss_pred ---CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCCC
Confidence 112221 112378999999999999999999999985 68877774
No 88
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.74 E-value=1.1e-05 Score=71.72 Aligned_cols=37 Identities=27% Similarity=0.499 Sum_probs=31.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-------CceEEEEeCCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPF 37 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~-------~~~vvaInd~~ 37 (218)
|+++||||+|+|.||+.+++.+.+.+ +++|++|.|..
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~ 47 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSL 47 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSS
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECC
Confidence 33599999999999999999987654 69999999974
No 89
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.72 E-value=7.1e-05 Score=62.64 Aligned_cols=134 Identities=20% Similarity=0.227 Sum_probs=77.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||||+|+|+||+.+++.+. .++++++++.|.....+. .| .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~~~-----~~--------------------------------~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEHEK-----MV--------------------------------RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCCTT-----EE--------------------------------SS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcchhh-----hc--------------------------------CC
Confidence 48999999999999999988 468999999886311000 01 11
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC-CCCeEEeecCccccCC-CCCEEEcCChhhhhHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNENEYKP-ELNIVSNASCTTNCLAP 161 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~-d~p~~V~gvN~~~~~~-~~~IIs~aSCtT~~Lap 161 (218)
++++-- .++|+|++||+.....+.+...+++|. .||+..|.. +.+-+...+- +.... ...++-.+++... ..
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~~ 116 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--LD 116 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--HH
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--hH
Confidence 222110 278999999998888888888888887 344444422 1110000110 11111 1232222222222 23
Q ss_pred HHHHHHhhcCeeEEEEEEEecc
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSI 183 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~ 183 (218)
.++.... |++++.+++.|..
T Consensus 117 ~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 117 AIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHhhc--cccEEEEEEEcCh
Confidence 3444343 8999999998875
No 90
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.69 E-value=4.3e-05 Score=68.05 Aligned_cols=97 Identities=14% Similarity=0.236 Sum_probs=62.6
Q ss_pred CCccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|.. ++.++ ..++++|++|+|+ +++....+.+ .+|. . . ++
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~--~~~~a~~~a~---~~~~----~-~---------------~~ 77 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEK--DDALAAEFSA---VYAD----A-R---------------RI 77 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECS--CHHHHHHHHH---HSSS----C-C---------------EE
T ss_pred ccCcEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcC--CHHHHHHHHH---HcCC----C-c---------------cc
Confidence 34689999999999965 44444 4578999999998 4443322211 1110 0 0 00
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 78 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 121 (361)
T 3u3x_A 78 --ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPG 121 (361)
T ss_dssp --SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCS
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 111111 11236899999999998889999999998 478887774
No 91
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.67 E-value=7.9e-05 Score=65.64 Aligned_cols=96 Identities=24% Similarity=0.242 Sum_probs=67.1
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 3 ~~kvgInG~G-rIGr~~~r~~~~~-~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
++||||+|+| .+|+.+++++... +++++++|+|+ +++....+.+ .+|. . +++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~-~-------------------~~~- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN-P-------------------AVF- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS-C-------------------EEE-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC-C-------------------ccc-
Confidence 5899999999 8999999999887 88999999998 4544322211 0110 0 011
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 115 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPI 115 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCCC
Confidence 111111 11236899999999998889999999998 478887774
No 92
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.66 E-value=0.00015 Score=63.22 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=63.1
Q ss_pred CccEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
|++||||+|+|.||+. +++.+...++++++ |.|+ +.+....+.+ .+|. . .. .
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~----~-------~~--------~-- 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV----S-------AT--------C-- 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC----C-------CC--------C--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC----C-------cc--------c--
Confidence 2489999999999984 89988887889999 9997 4443322211 0110 0 00 0
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
....+.+ +.++|+|+.||+.....+.+...+++|. .|++.-|.
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 96 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKPL 96 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESCS
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCCC
Confidence 0111122 2378999999998888888888888885 47776664
No 93
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.66 E-value=4.9e-05 Score=68.16 Aligned_cols=95 Identities=22% Similarity=0.293 Sum_probs=66.6
Q ss_pred ccEEEEEccC-hhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~G-rIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+|+| .+|+.+++++...+++++++|.|+ +.+....+. ..+| -. .+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a---~~~g----~~-----------------~~-- 53 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFG---KEYG----IP-----------------VF-- 53 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHH---HHHT----CC-----------------EE--
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHcC----CC-----------------eE--
Confidence 5899999999 999999999988889999999998 444321111 0011 00 00
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+..+|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 54 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP~ 97 (387)
T 3moi_A 54 ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKPL 97 (387)
T ss_dssp SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCCc
Confidence 111111 11236899999999998889999999998 578887773
No 94
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.65 E-value=8.2e-05 Score=68.98 Aligned_cols=110 Identities=13% Similarity=0.284 Sum_probs=63.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCc-eEE---ECCEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDK-TLL---FGEKPVT 77 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~-~l~---i~g~~i~ 77 (218)
+++||||+|+|+||+.+++.+.+.++++|++|+|. +++......+ ..||. . ..+...++. .+. -.+ .+.
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~-~-~~~~~~~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGD-E-ENAREATTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSS-S-TTEEECSSHHHHHHHHHTT-CEE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCC-c-cccccccchhhhhhhhccC-Cce
Confidence 46899999999999999999888899999999998 4443322221 00120 0 001100000 000 001 112
Q ss_pred EEeecCCCCCCccCCCccEEEeeCCcc-cCHHhHHHHHhCCCCEEE
Q 027805 78 VFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVI 122 (218)
Q Consensus 78 v~~~~~p~~i~W~~~gvDiVve~tg~f-~~~~~a~~h~~~GakkVi 122 (218)
++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|. .|+
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv 136 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLV 136 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEE
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEE
Confidence 22 233322 1234799999999863 45677888888876 444
No 95
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.61 E-value=0.00013 Score=63.87 Aligned_cols=97 Identities=13% Similarity=0.188 Sum_probs=61.5
Q ss_pred CCccEEEEEccChhHH-HHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 1 m~~~kvgInG~GrIGr-~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|+++||||+|+|.+|. .+++++. .++++|++|.|+. .+....+. ..|| + ++ ++
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~--~~~~~~~a---~~~~----~-~~---------------~~ 55 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESD--SDNRAKFT---SLFP----S-VP---------------FA 55 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSC--TTSCHHHH---HHST----T-CC---------------BC
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCC--HHHHHHHH---HhcC----C-Cc---------------cc
Confidence 7679999999999996 5666664 4689999999984 33221111 0011 0 00 00
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|.
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~ 99 (336)
T 2p2s_A 56 --ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKPP 99 (336)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred --CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCCC
Confidence 111111 112368999999999998999998999884 67777674
No 96
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.57 E-value=8e-05 Score=66.99 Aligned_cols=105 Identities=20% Similarity=0.155 Sum_probs=66.3
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCceEEE-EeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEE
Q 027805 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (218)
Q Consensus 1 m~~~kvgInG~Gr---IGr~~~r~~~~~~~~~vva-Ind~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i 76 (218)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+.+ .+|.-. ..+ + .+ + -
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~~-~~~-~-~~--~------~ 73 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGE---QLGVDS-ERC-Y-AD--Y------L 73 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHH---HTTCCG-GGB-C-SS--H------H
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHH---HhCCCc-cee-e-CC--H------H
Confidence 4568999999999 9999999988878899998 8887 4443322211 111100 000 0 00 0 0
Q ss_pred EEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 77 ~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.++.. ++. .+.++|+|+-||+.....+.+...+++|. .|++--|-
T Consensus 74 ~ll~~--~~~---~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 118 (398)
T 3dty_A 74 SMFEQ--EAR---RADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKPL 118 (398)
T ss_dssp HHHHH--HTT---CTTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred HHHhc--ccc---cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 01010 000 00258999999999999999999999984 67776663
No 97
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.56 E-value=0.00012 Score=66.38 Aligned_cols=100 Identities=25% Similarity=0.268 Sum_probs=65.4
Q ss_pred CCccEEEEEccCh---hHHHHHHHHHcCCCceEEE-EeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEE
Q 027805 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (218)
Q Consensus 1 m~~~kvgInG~Gr---IGr~~~r~~~~~~~~~vva-Ind~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i 76 (218)
|+++||||+|+|+ ||+.+++++...+++++++ |.|+ +++....+.+ .+|.-. . +. +
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~~--~-~~-------~----- 94 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGR---ELGLDP--S-RV-------Y----- 94 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHH---HHTCCG--G-GB-------C-----
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHH---HcCCCc--c-cc-------c-----
Confidence 4468999999999 9999999988888899997 9997 4443322211 111100 0 00 0
Q ss_pred EEEeecCCCCCCccC-----CCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 77 TVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 77 ~v~~~~~p~~i~W~~-----~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- .+ .++|+|+-||+.....+.+...+++|. .|++--|-
T Consensus 95 -----~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKPl 143 (417)
T 3v5n_A 95 -----SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKPL 143 (417)
T ss_dssp -----SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESSS
T ss_pred -----CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECCC
Confidence 0111110 01 268999999999999999999999984 68887773
No 98
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.55 E-value=0.00016 Score=63.28 Aligned_cols=95 Identities=21% Similarity=0.304 Sum_probs=64.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
|+||||+|+ |.||+.+++++... +.++++|+|+..+.. .+ +..+ + .++ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~---~~~~---~--~~~---------------~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG---LV---DSFF---P--EAE---------------FF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GG---GGTC---T--TCE---------------EE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HH---HhhC---C--CCc---------------ee--
Confidence 479999999 79999999999876 689999999853221 11 1111 1 011 11
Q ss_pred cCCCCCC-----c--cCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIP-----W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~-----W--~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++. | .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 105 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKPL 105 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECCC
Confidence 0111110 0 1347899999999999999999999999 578887663
No 99
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.53 E-value=0.00017 Score=64.09 Aligned_cols=35 Identities=34% Similarity=0.657 Sum_probs=31.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcC--------CCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~--------~~~~vvaInd~~ 37 (218)
|+||||+|+|.||+.+++.+.+. ++++|++|+|..
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~ 44 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK 44 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC
Confidence 37999999999999999999877 789999999974
No 100
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.50 E-value=6.1e-05 Score=68.91 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=68.3
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEE
Q 027805 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (218)
Q Consensus 3 ~~kvgInG~----GrIGr~~~r~~~~~-~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~ 77 (218)
++||||+|+ |.+|+.+++++... ++++|++|+|+ +.+....+. ..+|. + . ++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a---~~~g~-~--~---------------~~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATI---QRLKL-S--N---------------AT 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHH---HHTTC-T--T---------------CE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHH---HHcCC-C--c---------------ce
Confidence 589999999 99999999999988 89999999998 444322211 11110 0 0 01
Q ss_pred EEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCC-----CEEEEeCCC
Q 027805 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAPS 127 (218)
Q Consensus 78 v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Ga-----kkViis~ps 127 (218)
++ .+.+++- .+..+|+|+-||+.....+.+...+++|. |.|++--|.
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 11 1122221 12368999999999888898988999994 678887774
No 101
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.50 E-value=0.00045 Score=59.04 Aligned_cols=34 Identities=29% Similarity=0.529 Sum_probs=30.6
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
+||+|+| +|++|+.+++.+.+.++++++++.|..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 4899999 599999999999888899999999864
No 102
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.48 E-value=0.00012 Score=67.88 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=69.1
Q ss_pred CCccEEEEEcc----ChhHHHHHHHHHcC-CCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEE
Q 027805 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (218)
Q Consensus 1 m~~~kvgInG~----GrIGr~~~r~~~~~-~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~ 75 (218)
|+++||||+|+ |.+|+.+++++... ++++|++|+|+ +.+....+.+ .+|. + .+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~-~--~~-------------- 94 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL-K--HA-------------- 94 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC-T--TC--------------
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C--cc--------------
Confidence 34589999999 99999999999887 89999999998 4443222111 1220 0 00
Q ss_pred EEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCC-----CEEEEeCCC
Q 027805 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAPS 127 (218)
Q Consensus 76 i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Ga-----kkViis~ps 127 (218)
.++ .+.+++ ..+.++|+|+-||+.....+.+...+++|. |.|++--|.
T Consensus 95 -~~~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 95 -TGF--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp -EEE--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred -eee--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 011 112111 112378999999999888898988999994 789988774
No 103
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.46 E-value=0.00023 Score=62.36 Aligned_cols=95 Identities=23% Similarity=0.197 Sum_probs=65.3
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
|+||||+|+ |.||+.+++++.+. +.+++++.|+..+.. .+ +..+ + . ++ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~---~~~~---~-~-~~---------------~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG---II---DSIS---P-Q-SE---------------FF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GG---GGTC---T-T-CE---------------EE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HH---HhhC---C-C-Cc---------------EE--
Confidence 479999999 79999999999876 699999999853221 11 1111 1 0 01 11
Q ss_pred cCCCCCC--------ccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIP--------WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~--------W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++. ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 106 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKPL 106 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 0111110 02347999999999999999999999999 478887773
No 104
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.42 E-value=0.00028 Score=61.29 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=62.1
Q ss_pred cEEEEEccChhHHHH-HHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~GrIGr~~-~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
+||||+|+|.+|+.+ ++.+.+ +++++++|.|+ +.+....+.+ .+|.-. ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~~~--------------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGIGK--------------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTCSC--------------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCCCc--------------------cc--C
Confidence 489999999999997 788877 88999999998 4443322211 111000 00 0
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++-.|.
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP~ 95 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKPL 95 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCCC
Confidence 11111 011268999999999888888888888884 67776563
No 105
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.39 E-value=4.8e-05 Score=66.80 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=64.0
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCc--ChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~--~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
|++||||+|+|.+|+.+++++ .++++|++|+|+.. ..+..+-.++ .||. .. +++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~----~~---------------~~~ 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI----KP---------------KKY 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC----CC---------------EEC
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC----CC---------------ccc
Confidence 248999999999999888877 78899999999842 1222222110 0110 00 011
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.|.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|-
T Consensus 57 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKPl 100 (337)
T 3ip3_A 57 --NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKPI 100 (337)
T ss_dssp --SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSSS
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCCC
Confidence 112221 112368999999999988898999999984 68887774
No 106
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.18 E-value=0.00062 Score=49.37 Aligned_cols=96 Identities=16% Similarity=0.243 Sum_probs=57.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
++||.|.|.|.+|+.+++.+...+..+++++.- +.+.+..+. . .| +.. +..+ ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~---~-~~------~~~-----~~~d--------~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLN---R-MG------VAT-----KQVD--------AK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHH---T-TT------CEE-----EECC--------TT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHH---h-CC------CcE-----EEec--------CC
Confidence 479999999999999999998875477666543 333332221 0 00 000 0000 01
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEe
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis 124 (218)
+++.+.-.-.++|+||.|+|...........++.|.+.+.++
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 111110001278999999998777777777788898765544
No 107
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.11 E-value=0.00064 Score=58.59 Aligned_cols=134 Identities=18% Similarity=0.142 Sum_probs=78.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+||++.|||.||+.+++. . ++|++++.+ . .. + .| |- . ...|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~----k~---------------g--------el---gv--~--a~~d 53 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R----IS---------------K--------DI---PG--V--VRLD 53 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S----SC---------------C--------CC---SS--S--EECS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c----cc---------------c--------cc---Cc--e--eeCC
Confidence 799999999999999998 3 799999876 1 10 1 12 11 1 1245
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCC--CCCeEEeecCccccCCCCCEEEcCChhhhhHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNENEYKPELNIVSNASCTTNCLAP 161 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~--d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap 161 (218)
.+++. + .+|+|+||.+...-.++...-|++|+. |+++.+.. | |-+.-.+..-.-....+ +-.||-.--.| =
T Consensus 54 ~d~ll--a-~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~gaLad-~~l~~~L~~aA~~gg~~-l~vpSGAi~Gl-D 126 (253)
T 1j5p_A 54 EFQVP--S-DVSTVVECASPEAVKEYSLQILKNPVN-YIIISTSAFAD-EVFRERFFSELKNSPAR-VFFPSGAIGGL-D 126 (253)
T ss_dssp SCCCC--T-TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCGGGGGS-HHHHHHHHHHHHTCSCE-EECCCTTCCCH-H
T ss_pred HHHHh--h-CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcChhhhcC-HHHHHHHHHHHHHCCCe-EEecCCcccch-h
Confidence 66665 2 789999999988666778889999984 34433322 2 11100000000011122 21222222222 2
Q ss_pred HHHHHHhhcCeeEEEEEEEeccCC
Q 027805 162 LAKVIHDKFGIVEGLMTTVHSITA 185 (218)
Q Consensus 162 ~lk~L~~~fgI~~~~~Ttvha~t~ 185 (218)
.++... -+|+++.++|.-+..+
T Consensus 127 ~l~aa~--g~l~~V~~~t~K~P~~ 148 (253)
T 1j5p_A 127 VLSSIK--DFVKNVRIETIKPPKS 148 (253)
T ss_dssp HHHHHG--GGEEEEEEEEEECGGG
T ss_pred HHHHhc--CCccEEEEEEeCChHH
Confidence 233333 6899999999887744
No 108
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.06 E-value=0.00043 Score=61.56 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=63.0
Q ss_pred CCccEEEEEc-cChhHHH-HH----HHHHcCCCceEE---------EEeCCCcChhhhhhheeeccccccccCccEEEeC
Q 027805 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD 65 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~-~~----r~~~~~~~~~vv---------aInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~ 65 (218)
|+++||||+| +|++|+. ++ +++.+.++++++ +|.|. +++....+.+ .+|. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~---~~~~----~----- 69 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAK---RFNI----A----- 69 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHH---HTTC----C-----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHH---HhCC----C-----
Confidence 4568999999 9999997 77 777766655544 78887 4443322211 1110 0
Q ss_pred CceEEECCEEEEEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 66 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 66 ~~~l~i~g~~i~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.++ .|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 70 -----------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP~ 116 (383)
T 3oqb_A 70 -----------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKPI 116 (383)
T ss_dssp -----------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSCS
T ss_pred -----------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCCC
Confidence 000 111111 11236899999999999999999999998 467776563
No 109
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.86 E-value=0.00071 Score=61.67 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=61.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCC-ceEEEE-eCCCcChhhhhhhee-eccccccccCccEEEeCCc---eE--EECC
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAV-NDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK---TL--LFGE 73 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~-~~vvaI-nd~~~~~~~~ayl~k-ydS~~G~~~~~~v~~~~~~---~l--~i~g 73 (218)
|+||+|+|+ |.||+.+++.+.+.|+ ++++++ .+. +.+.+....+ |.. ..+...+.+ .+ .+.+
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~l~~~~~~f~~-------~~v~v~d~~~~~~l~~~l~~ 74 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKDLADAAKRTNA-------KRAVIADPSLYNDLKEALAG 74 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHHHHHHHHHTTC-------SEEEESCGGGHHHHHHHTTT
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHHHHHHHHHcCC-------cEEEEcChHHHHHHHHHhcc
Confidence 389999997 9999999999988876 999999 554 4543322211 111 011111100 00 0111
Q ss_pred EEEEEEe-ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeC
Q 027805 74 KPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (218)
Q Consensus 74 ~~i~v~~-~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ 125 (218)
..++++. +.+..++- ... +|+|+++++.+...+-.-..+++|. +| +.+
T Consensus 75 ~~~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aGK-~V-vlA 123 (388)
T 1r0k_A 75 SSVEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKGK-TV-ALA 123 (388)
T ss_dssp CSSEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTTS-EE-EEC
T ss_pred CCcEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCCC-EE-EEe
Confidence 1122321 11111111 123 7999999955667777777788874 54 444
No 110
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.84 E-value=0.0011 Score=55.41 Aligned_cols=94 Identities=19% Similarity=0.168 Sum_probs=63.4
Q ss_pred ccEEEEEccChhHHHHHHHH-HcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~-~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
..||+|+|.|.+|+.+++.+ +.. ++++|++.|. +++.. | -.++|.++. ..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k~----------g--------------~~i~gv~V~--~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEKV----------G--------------RPVRGGVIE--HV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTTT----------T--------------CEETTEEEE--EG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHHH----------h--------------hhhcCCeee--cH
Confidence 36999999999999999863 344 7999999986 33221 1 123343332 22
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++ ..+ ++|.|+-|++.....+-+...+++|.+-++.-.|-
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 233332 134 79999999998877677778888998766555664
No 111
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.75 E-value=0.0033 Score=52.63 Aligned_cols=94 Identities=13% Similarity=0.210 Sum_probs=59.3
Q ss_pred ccEEEEEccChhHHHHHHH-HHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~-~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
..||+|+|.|.+|+.+++. .+..++++++++.|. +++.. | -.++|.++. ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k~----------g--------------~~i~gv~V~--~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESKI----------G--------------TEVGGVPVY--NL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTTT----------T--------------CEETTEEEE--EG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHHH----------H--------------hHhcCCeee--ch
Confidence 3689999999999999995 344567999999986 33221 1 123443332 22
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-+|-
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 2333221 12 3 999999998777777778889999877776664
No 112
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.33 E-value=0.0094 Score=53.60 Aligned_cols=135 Identities=16% Similarity=0.203 Sum_probs=83.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC-CceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~-~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
++||||+|+| +|+.+++++.+.+ ++|||||.|+. .+....+. .-||- +.+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~--~~~a~~~a---~~~gv---------------------~~~-- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQG--SARSRELA---HAFGI---------------------PLY-- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCS--SHHHHHHH---HHTTC---------------------CEE--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCC--HHHHHHHH---HHhCC---------------------CEE--
Confidence 5899999999 7999999887765 69999999983 33321111 11110 111
Q ss_pred cCCCCCCccCCCccEEEeeCCcccC----HHhHHHHHhCCCCEEEEeCCCC--------------CCCeEEeecCccccC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISAPSK--------------DAPMFVVGVNENEYK 143 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~----~~~a~~h~~~GakkViis~ps~--------------d~p~~V~gvN~~~~~ 143 (218)
.+.+++. .++|+|+=+|+.... .+.+...+++|. .|++--|-. ++ .+..|-|+..+.
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKPl~~~ea~~l~~~A~~~g~-~~~v~~~yr~~p 132 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHPLHPDDISSLQTLAQEQGC-CYWINTFYPHTR 132 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESCCCHHHHHHHHHHHHHHTC-CEEEECSGGGSH
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecCCCHHHHHHHHHHHHHcCC-EEEEcCcccCCH
Confidence 2233332 257888889987766 577888888886 688877731 23 344455543211
Q ss_pred -----------------CCCCEEEcCChhhhhHHHHHHHHHhhcCe
Q 027805 144 -----------------PELNIVSNASCTTNCLAPLAKVIHDKFGI 172 (218)
Q Consensus 144 -----------------~~~~IIs~aSCtT~~Lap~lk~L~~~fgI 172 (218)
.....| .++|...-+-|.+.+|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i-~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVV-HATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEE-EEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEE-EEEeccccccchHHHHHHhcCC
Confidence 012233 3467888888888888776663
No 113
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.31 E-value=0.0033 Score=52.75 Aligned_cols=96 Identities=17% Similarity=0.270 Sum_probs=62.8
Q ss_pred ccEEEEEccChhHHHHHHHH-HcCCCceEEEEeCCCcChh-hhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTD-YMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~-~~~~~~~vvaInd~~~~~~-~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
+.+|+|+|.|.+|+.+++.+ ++..++++||+-|. +++ . .|+- .++|. +|+.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~k----------iG~~-------------~i~Gv--pV~~ 136 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSNDL----------VGKT-------------TEDGI--PVYG 136 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTSTT----------TTCB-------------CTTCC--BEEE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchhc----------cCce-------------eECCe--EEeC
Confidence 36999999999999998874 34457999999886 332 2 1210 12222 2222
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
..+.+++ -.+.++|+++-|++.....+-+....++|.|.++--+|
T Consensus 137 ~~dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 137 ISTINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGGHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 1222111 12358999999999887777778888899988665555
No 114
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.21 E-value=0.017 Score=50.45 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=53.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
.+||||+|+|.||..+++.+...... +|++ .|. +.+.+..+.+ .|.. + .. .
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~-~dr--~~~~~~~a~~----~G~~---------~----------~~--~ 84 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI--NPESISKAVD----LGII---------D----------EG--T 84 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS--CHHHHHHHHH----TTSC---------S----------EE--E
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEE-EEC--CHHHHHHHHH----CCCc---------c----------hh--c
Confidence 47999999999999999999876422 5554 455 4444433221 1100 0 01 1
Q ss_pred cCCCC-CCccCCCccEEEeeCCcccCHHhH---HHHHhCCCCEEEEeCCC
Q 027805 82 RNPEE-IPWAETGAEYVVESTGVFTDKDKA---AAHLKGGAKKVIISAPS 127 (218)
Q Consensus 82 ~~p~~-i~W~~~gvDiVve~tg~f~~~~~a---~~h~~~GakkViis~ps 127 (218)
.++++ . -.+.|+||.|++.....+-. ..+++.|+ +|++..|
T Consensus 85 ~~~~~~~---~~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~d~~S 129 (314)
T 3ggo_A 85 TSIAKVE---DFSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVTDQGS 129 (314)
T ss_dssp SCTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEEECCS
T ss_pred CCHHHHh---hccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEEECCC
Confidence 23333 1 13689999999976544322 23444555 7877665
No 115
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.01 E-value=0.0057 Score=54.83 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCC---CceEEEEeCC
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~---~~~vvaInd~ 36 (218)
+++||||+|+|.||+.+++.+.+.+ ++++++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4589999999999999999998765 6999999995
No 116
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=95.80 E-value=0.023 Score=51.49 Aligned_cols=112 Identities=16% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhee-eccccccccCccEEEeCCceE--EECCEEE
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTL--LFGEKPV 76 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~k-ydS~~G~~~~~~v~~~~~~~l--~i~g~~i 76 (218)
|.+.||+|.| +|.||...++.+.+.++++++++..- .+.+.++...+ |.. ..+...+.... .+. ..
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q~~~f~p-------~~v~v~~~~~~~~~l~-~~- 70 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKIVKEFNV-------KNVAITGDVEFEDSSI-NV- 70 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHHHHHHTC-------CEEEECSSCCCCCSSS-EE-
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHHHHHcCC-------CEEEEccHHHHHHHHH-HH-
Confidence 5447999999 79999999999877678999999432 25555544322 221 11111111000 000 00
Q ss_pred EEEeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeC
Q 027805 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (218)
Q Consensus 77 ~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ 125 (218)
+..+....++- ....+|+|+.++..+...+-.-..+++| |+|.+.+
T Consensus 71 -~~G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 71 -WKGSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp -EESTTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred -ccCHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 11110001110 1125899999999988888777778888 4666533
No 117
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.56 E-value=0.0099 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=29.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|+++||+|+|+|.+|..+++.+.+. +.+++.+.|.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4457999999999999999998876 4788876776
No 118
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=95.45 E-value=0.0084 Score=53.10 Aligned_cols=93 Identities=19% Similarity=0.183 Sum_probs=56.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
+|||.|+|.|.+|+.+++.+.+..++.++.+ +.+.+..+.+ . . . .+.++ ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~-----~~~~~~~~~~--~-----~-~--------~~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDV-----NNENLEKVKE--F-----A-T--------PLKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEES-----CHHHHHHHTT--T-----S-E--------EEECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEc-----CHHHHHHHhc--c-----C-C--------cEEEe--------cC
Confidence 4799999999999999998876554443333 2233322210 0 0 0 11111 11
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
|++.+.=.-.++|+|+.|+|.|...+-+...+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111001378999999999988888888888988 566654
No 119
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.34 E-value=0.089 Score=40.54 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=56.7
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 3 ~~kvgInG~----GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
..+|+|+|. |++|+.+++.+.+. +++++.+|-. . +. +.|.+ +
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~---~---------~~-------------------i~G~~--~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPN---Y---------DE-------------------IEGLK--C 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT---C---------SE-------------------ETTEE--C
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCC---C---------Ce-------------------ECCee--e
Confidence 469999999 99999999998876 4676655421 0 00 12211 1
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
+ .++++++ ..+|+|+=+++.....+-....+++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 1 2345554 26899999999655555555666789998888664
No 120
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.29 E-value=0.035 Score=48.06 Aligned_cols=89 Identities=26% Similarity=0.257 Sum_probs=57.9
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
.+||+|+|+ |++|+.+++.+.+. ++++++..+|.. . | . . +.|. +++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~-~-------------g-----~-------~--~~G~--~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGK-G-------------G-----T-------T--HLGL--PVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC-T-------------T-----C-------E--ETTE--EEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCc-c-------------c-----c-------e--eCCe--ecc--
Confidence 579999997 99999999998876 578887666620 0 0 0 0 1121 121
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEE-EeC
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVI-ISA 125 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVi-is~ 125 (218)
.+.++++ .+..+|+|+.+|+.....+.+...+++|.+.+| ++.
T Consensus 54 ~sl~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 54 NTVREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp SSHHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred CCHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1122222 012579999999988888888888889988644 443
No 121
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.05 E-value=0.17 Score=46.99 Aligned_cols=103 Identities=16% Similarity=0.265 Sum_probs=66.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC--------cChhhhhhheeecccc-ccccCccEEEeCCceEEECCE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGEK 74 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~--------~~~~~~ayl~kydS~~-G~~~~~~v~~~~~~~l~i~g~ 74 (218)
.+|+|-|||-+|...++.+.+. +..+|+|.|.. .+.+.+..|+++-... |+.. . +.+. ..|
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~-~---~~~~----~~~- 322 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK-E---YLNH----SST- 322 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG-G---GGGT----CSS-
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH-H---HHhh----cCC-
Confidence 6899999999999999988876 69999999953 2445565665543222 2222 0 0000 001
Q ss_pred EEEEEeecCCCCCCccCCCccEEEeeC-CcccCHHhHHHHHhCCCCEEEE
Q 027805 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 75 ~i~v~~~~~p~~i~W~~~gvDiVve~t-g~f~~~~~a~~h~~~GakkVii 123 (218)
.+.. +++++ | ...+||.+-|. +..++.+.+...++.+|| +|+
T Consensus 323 -a~~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 323 -AKYF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp -CEEC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred -cEEe---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 0111 12333 7 46899999986 577888899888777885 344
No 122
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=94.02 E-value=0.19 Score=38.83 Aligned_cols=86 Identities=16% Similarity=0.185 Sum_probs=56.3
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 3 ~~kvgInG~----GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
..+|+|+|. |++|+.+++.+.+.+ +++..+|-. .. | . . +.|. ++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~-----~~----------g-----------~-~--i~G~--~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK-----VA----------G-----------K-T--LLGQ--QG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS-----ST----------T-----------S-E--ETTE--EC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc-----cc----------c-----------c-c--cCCe--ec
Confidence 358999998 899999999987664 665555421 00 0 0 1 1232 12
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeC
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ 125 (218)
+ .++++++ ..+|+|+=|++.....+-....+++|+|.++++.
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 3466665 3789999999975555555556678999988864
No 123
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.93 E-value=0.045 Score=46.31 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=27.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC-CceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~-~~~vvaInd~ 36 (218)
|+++||||+|+|.+|..+++.+.... +.+|+. .|.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 39 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVG-YNR 39 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEE-ECS
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEE-EcC
Confidence 54579999999999999999887653 466554 454
No 124
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.75 E-value=0.076 Score=46.85 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=26.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|||+|+|+||+.+++.+... +++|++.+-
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999998876 588887653
No 125
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=93.37 E-value=0.36 Score=37.14 Aligned_cols=84 Identities=20% Similarity=0.199 Sum_probs=56.5
Q ss_pred ccEEEEEcc----ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 3 ~~kvgInG~----GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
..+|+|+|. |++|+.+++.+.+. ++++..+|-. . +. +.|.+ +
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~-G~~v~~Vnp~---~---------~~-------------------i~G~~--~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH-GYDVYPVNPK---Y---------EE-------------------VLGRK--C 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT---C---------SE-------------------ETTEE--C
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC-CCEEEEECCC---C---------Ce-------------------ECCee--c
Confidence 368999998 79999999988776 4676666421 0 11 12211 2
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeC
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ 125 (218)
+ .++++++ ..+|+|+=+++.....+-+....++|+|.++++.
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 1 2344554 2689999999986666666677788999887764
No 126
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.36 E-value=0.15 Score=43.03 Aligned_cols=32 Identities=38% Similarity=0.557 Sum_probs=26.0
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+|.+|+| .||+||.+.+.+ +.++++|++.-|.
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~ 45 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDV 45 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEET
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcC
Confidence 6899999 699999998765 5567999987653
No 127
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=93.26 E-value=0.092 Score=46.37 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=26.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|||+|+|+||+.+++.+... +++|++.+-
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEEEcC
Confidence 6899999999999999999776 588887653
No 128
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.00 E-value=0.27 Score=37.85 Aligned_cols=87 Identities=11% Similarity=0.059 Sum_probs=57.1
Q ss_pred cEEEEEcc----ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 4 ~kvgInG~----GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
.+|+|+|. |++|+.+++.+.+. ++++..+|- +.. ++. +.|.+ ++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~-G~~v~~vnp-----~~~-----~~~-------------------i~G~~--~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ-GYRVLPVNP-----RFQ-----GEE-------------------LFGEE--AV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT-TCEEEEECG-----GGT-----TSE-------------------ETTEE--CB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC-CCEEEEeCC-----Ccc-----cCc-------------------CCCEE--ec
Confidence 58999998 89999999998776 467666542 110 011 12322 21
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps 127 (218)
.+.++++ ..+|+|+=+++.....+-.....+.|+|.++++.+.
T Consensus 62 --~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 62 --ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp --SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTC
T ss_pred --CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCCc
Confidence 2344554 268999999987655555666777899998887653
No 129
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=92.96 E-value=0.16 Score=44.87 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=26.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.++||+|+|+||+.+++.+... ++++++. |+.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~-d~~ 173 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCY-DVV 173 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CSS
T ss_pred cEEEEECcchHHHHHHHhhccc-Cceeeec-CCc
Confidence 5899999999999999988766 4787754 553
No 130
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=92.94 E-value=0.097 Score=46.63 Aligned_cols=30 Identities=33% Similarity=0.479 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 203 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHN 203 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 58877654
No 131
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.85 E-value=0.13 Score=43.16 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=26.9
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|.|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 47899999 8999999999998874 77777654
No 132
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=92.84 E-value=0.027 Score=47.78 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=22.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|| +||||+|+|.+|..+++.+... .+++.+.|.
T Consensus 1 M~-m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MS-LVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ----CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CC-ceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 54 7999999999999999887654 666566665
No 133
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.83 E-value=0.1 Score=43.92 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=25.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+++||+|+|.|.+|..+++.+.+.. .+|+.++
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLID 33 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEE
Confidence 34579999999999999999988764 5766553
No 134
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=92.83 E-value=0.1 Score=46.21 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d 171 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEEC
Confidence 6899999999999999999876 47877654
No 135
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.78 E-value=0.27 Score=45.55 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=28.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhh
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ay 45 (218)
..||||+|.|.+|..+++.+.+. +.+|+. .|. +.+.+..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G~~V~l-~D~--~~e~l~~ 43 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-GHQVLL-YDI--SAEALTR 43 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEE-ECS--CHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEEE-EEC--CHHHHHH
Confidence 35999999999999999998876 467654 455 4444433
No 136
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.74 E-value=0.076 Score=44.03 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~ 26 (218)
|+++||+|+|+|.+|..+++.+.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 65679999999999999999887653
No 137
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=92.70 E-value=0.095 Score=46.02 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|||+|+|+||+.+++.+... +++|++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcC
Confidence 6899999999999999998766 578887753
No 138
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=92.66 E-value=0.18 Score=43.58 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=55.7
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
..||+|+|+ |+.|+.+++.+.+. ++++++..+|... | . . +.|. +++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~--------------g-----~-------~--i~G~--~vy~- 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKG--------------G-----M-------E--VLGV--PVYD- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT--------------T-----C-------E--ETTE--EEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCC--------------C-----c-------e--ECCE--EeeC-
Confidence 479999996 99999999988775 5787755555210 0 0 0 1221 1221
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii 123 (218)
+.++++- +..+|+++.+++.....+.+...+++|++.+|+
T Consensus 55 -sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 55 -TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp -SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 1222221 126799999999887777788888899986554
No 139
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.64 E-value=0.095 Score=44.73 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=26.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-ceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~-~~vvaInd~ 36 (218)
|+++||||+|+|.+|..+++.+.+... .+-|.+.|+
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 666899999999999999999987641 222345565
No 140
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.56 E-value=0.12 Score=39.41 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=28.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|...+|.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQR-GQNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6667999999999999999999876 477777754
No 141
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=92.54 E-value=0.11 Score=45.16 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-GAQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999998766 47776554
No 142
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=92.51 E-value=0.12 Score=45.54 Aligned_cols=30 Identities=27% Similarity=0.634 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGED 176 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998766 47876553
No 143
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.45 E-value=0.15 Score=42.23 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|+.+++.+...+ .+ |.+.|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~-v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HE-LIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CE-EEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-Ce-EEEECC
Confidence 69999999999999999987664 44 566676
No 144
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=92.44 E-value=0.12 Score=45.54 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999998766 47776543
No 145
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.43 E-value=0.12 Score=46.08 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 190 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF-GMNVLVWG 190 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEC
Confidence 6899999999999999998776 58877664
No 146
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=92.40 E-value=0.12 Score=45.95 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d 178 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYD 178 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEEC
Confidence 5899999999999999998866 57877664
No 147
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.35 E-value=0.13 Score=44.37 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.8
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
+++||+|+|+|.+|..+++.+... +.+|+.+
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~-g~~V~~~ 33 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALK-GQSVLAW 33 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-CCEEEEE
Confidence 357999999999999999988775 4676554
No 148
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.29 E-value=0.13 Score=45.43 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d 195 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF-GMKTIGYD 195 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 47877654
No 149
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.28 E-value=0.12 Score=38.62 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|.|.|+|++|+.+++.+.+. +.+++++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA-GKKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEC
Confidence 5899999999999999999876 477777753
No 150
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.27 E-value=0.13 Score=45.77 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=26.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|..+++.+.+.. .+|+.. |.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~-dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVY-DL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 479999999999999999998874 666544 54
No 151
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.20 E-value=0.15 Score=46.61 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=29.7
Q ss_pred cEEEEEccChhHHHHHHHHHc-CCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~-~~~~~vvaInd~~ 37 (218)
.+|+|.|||+||+.+++.+.. . ++++++++|+.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 689999999999999998887 5 69999999874
No 152
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=92.18 E-value=0.14 Score=45.49 Aligned_cols=29 Identities=28% Similarity=0.397 Sum_probs=24.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+|||+|+|+||+.+++.+... +++|++.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~ 200 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRYW 200 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 6899999999999999998765 4776644
No 153
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=92.16 E-value=0.14 Score=44.76 Aligned_cols=30 Identities=30% Similarity=0.541 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 176 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF-DMDIDYFD 176 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998865 47877664
No 154
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=92.12 E-value=0.14 Score=45.46 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=26.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|||+|+|+||+.+++.+... +++|++. |+.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 200 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF-GFNVLFY-DPY 200 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTT
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 6899999999999999998866 5787764 443
No 155
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.11 E-value=0.11 Score=45.10 Aligned_cols=30 Identities=33% Similarity=0.550 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 152 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYT 152 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEe
Confidence 5899999999999999998765 57877764
No 156
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.07 E-value=0.11 Score=45.82 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=25.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|||+|+|+||+.+++.+... +++|++. |+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~ 177 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQYH-EAK 177 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEEE-CSS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 6999999999999999987655 5787665 443
No 157
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.04 E-value=0.13 Score=45.85 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 194 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHD 194 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEEC
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeC
Confidence 5899999999999999998765 57866554
No 158
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.02 E-value=0.13 Score=42.82 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=27.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|+.+++.+... +.++|.+.|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeC
Confidence 6999999999999999988765 4677777776
No 159
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=91.96 E-value=0.14 Score=46.07 Aligned_cols=32 Identities=34% Similarity=0.691 Sum_probs=26.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|||+|+|+||+.+++.+... +++|++. |+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~-d~~ 208 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVF-DPW 208 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEE-CSS
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEE-CCC
Confidence 5899999999999999988665 5787765 454
No 160
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=91.85 E-value=0.16 Score=44.34 Aligned_cols=30 Identities=33% Similarity=0.572 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d 174 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF-GMRVVYHA 174 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEEECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998866 47776654
No 161
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.84 E-value=0.17 Score=43.34 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~ 36 (218)
++||+|+|.|.+|..++..+...+.+ +|+ +.|.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~-l~d~ 40 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIV-LEDI 40 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEE-EECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 36999999999999998888776433 555 4454
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.76 E-value=0.17 Score=38.25 Aligned_cols=32 Identities=28% Similarity=0.560 Sum_probs=26.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+.+|.|.|+|++|+.+++.+.+. +.++++|..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 38 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS-DIPLVVIET 38 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 36899999999999999999876 478887754
No 163
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.73 E-value=0.15 Score=42.24 Aligned_cols=34 Identities=24% Similarity=0.489 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCc---eEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~---~vvaInd~ 36 (218)
|+ +||+|+|+|.+|..+++.+.+...+ +|+ +.|.
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~-~~~r 37 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKNIVSSNQII-CSDL 37 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTTSSCGGGEE-EECS
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCCCCCCCeEE-EEeC
Confidence 54 7999999999999999999876421 444 5565
No 164
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=91.70 E-value=0.18 Score=41.91 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=26.6
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+.+.++.+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 799999 8999999999987765688888765
No 165
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.67 E-value=0.17 Score=44.00 Aligned_cols=30 Identities=37% Similarity=0.609 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 172 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL-GMNILLYD 172 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998876 47776554
No 166
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.67 E-value=0.17 Score=44.56 Aligned_cols=30 Identities=17% Similarity=0.450 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d 176 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITYD 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEC
Confidence 6899999999999999998866 47876654
No 167
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=91.56 E-value=0.47 Score=37.78 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=26.1
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+.+. +.+|+++.-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTT-DYQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTS-SCEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 899999 999999999999877 478888764
No 168
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.55 E-value=0.17 Score=45.93 Aligned_cols=29 Identities=24% Similarity=0.371 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.++||+|+|+||+.+++.+... +++|++.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~~ 174 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYFY 174 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999998876 4787654
No 169
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.53 E-value=0.18 Score=43.98 Aligned_cols=31 Identities=39% Similarity=0.568 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|||+|+|+||+.+++.+... +++|++. |+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~-d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-GMKVLAY-DI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEE-CC
Confidence 6899999999999999998866 4787655 44
No 170
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.48 E-value=0.18 Score=42.60 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||+|+|+|.+|+.+++.+... +.+|+ +.|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-GVTVY-AFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-TCEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEE-EEeC
Confidence 57999999999999999998876 46765 4555
No 171
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.43 E-value=0.18 Score=45.61 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+|||+|+|+||+.+++.+... +++|++.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~ 148 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLC 148 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999999876 5787765
No 172
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=91.36 E-value=0.18 Score=45.46 Aligned_cols=31 Identities=23% Similarity=0.448 Sum_probs=25.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|||+|+|+||+.+++.+... ++++++. |+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~-d~ 147 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLVC-DP 147 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CH
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEEE-cC
Confidence 6899999999999999998766 5787664 44
No 173
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=91.34 E-value=0.16 Score=43.78 Aligned_cols=32 Identities=31% Similarity=0.532 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..|||++|+|.+|..+++++.+. +++|++ .|.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~-G~~V~v-~dr 36 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEA-GYELVV-WNR 36 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT-TCEEEE-C--
T ss_pred CCcEEEEecHHHHHHHHHHHHHC-CCeEEE-EeC
Confidence 36999999999999999999987 477664 444
No 174
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.28 E-value=0.27 Score=36.03 Aligned_cols=30 Identities=27% Similarity=0.560 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++|.|+|+|++|+.+++.+.+. +.+++.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEE
Confidence 6899999999999999998876 47777664
No 175
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=91.26 E-value=0.2 Score=44.28 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHH-cCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~-~~~~~~vvaInd~ 36 (218)
.+|||+|+|+||+.+++.+. .. +++|++. |+
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~-d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVYY-DV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE-CS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEEE-CC
Confidence 58999999999999999987 65 5777654 44
No 176
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.20 E-value=0.19 Score=42.39 Aligned_cols=31 Identities=32% Similarity=0.652 Sum_probs=25.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|+.+++.+... +.+|+ +.|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g~~V~-~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-GYSLV-VSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEE-EECS
T ss_pred ceEEEECchHHHHHHHHHHHhC-CCEEE-EEeC
Confidence 6999999999999999998876 46754 5555
No 177
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.17 E-value=0.23 Score=41.98 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=25.6
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+ |.+|+.+++.+.... .+|+ +.|.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g-~~V~-~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA-HHLA-AIEI 43 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS-SEEE-EECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEE-EEEC
Confidence 69999999 999999999988764 6776 4454
No 178
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.04 E-value=1.4 Score=37.82 Aligned_cols=30 Identities=33% Similarity=0.422 Sum_probs=24.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++||+|+|.|.+|..++..+. . +.+|..+.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~ 31 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L-YHDVTVVT 31 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-c-CCceEEEE
Confidence 479999999999999988887 4 56776664
No 179
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.88 E-value=0.24 Score=42.34 Aligned_cols=32 Identities=28% Similarity=0.438 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|..+++.+.+. +.+|+.. |.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~-dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-GLSTWGA-DL 38 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEE-EC
Confidence 47999999999999999999876 4676655 54
No 180
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.76 E-value=0.22 Score=43.36 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=26.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|||+|+|.|.||..++..+..++-+.-+++.|..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4999999999999999888766655555566764
No 181
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=90.74 E-value=0.21 Score=45.30 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 221 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF-DVHLHYTD 221 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEc
Confidence 5899999999999999998765 47877654
No 182
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.66 E-value=0.29 Score=40.65 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+||||+|+|.+|..+++.+.... .+|+..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~ 48 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIG 48 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 479999999999999999998764 676654
No 183
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.65 E-value=0.2 Score=44.21 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=23.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+|||+|+|+||+.+++.+... +++|++.
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~ 193 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF-DCPISYF 193 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999998765 4666543
No 184
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.63 E-value=0.28 Score=42.14 Aligned_cols=32 Identities=16% Similarity=0.438 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|..+++.+.+.. .+|+.. |.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~-dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG-FKVTVW-NR 52 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEE-eC
Confidence 379999999999999999998774 676654 54
No 185
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.59 E-value=0.22 Score=43.65 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++|||+|+|+||+.+++.+... +++|++.+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d 185 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF-GVQRFLYT 185 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998765 46776554
No 186
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.56 E-value=0.19 Score=41.98 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|+.+++.+.. +.+|+. .|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~~-~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTLV-WNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEEE-ECS
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEEE-EeC
Confidence 489999999999999999887 577654 454
No 187
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=90.49 E-value=0.23 Score=43.64 Aligned_cols=32 Identities=34% Similarity=0.534 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|||+|+|+||+.+++.+... +++|++. |+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~-d~~ 178 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF-GVKLYYW-SRH 178 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEE-CSS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE-CCC
Confidence 5899999999999999998765 4777654 443
No 188
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.44 E-value=0.35 Score=47.04 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.||||+|.|.+|..++..+.+. +.+|+.. |.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~-D~ 343 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILK-EV 343 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEE-CS
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEE-EC
Confidence 5899999999999999998876 4676654 44
No 189
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.43 E-value=0.31 Score=42.21 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=25.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|..+++.+.+....+|+. .|.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~-~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAA-YDL 56 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEE-ECG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEE-EeC
Confidence 479999999999999999988763156664 444
No 190
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=90.42 E-value=1.1 Score=33.75 Aligned_cols=83 Identities=19% Similarity=0.120 Sum_probs=59.4
Q ss_pred cEEEEEcc----ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 4 ~kvgInG~----GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
.+|+|+|. ++.|..+++.+.+.. ++|..||-- ++.. .|.+ .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~i-------------------~G~~--~- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGEV-------------------LGKT--I- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSEE-------------------TTEE--C-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCcC-------------------CCee--c-
Confidence 57999994 789999999998764 688888732 1222 2211 1
Q ss_pred eecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 80 ~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
-.+.+++| . +|+|+=+++.....+..+...+.|+|.|+++..
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 13456666 3 899999999877777777778889999888654
No 191
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.40 E-value=0.26 Score=43.22 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++|||+|+|+||+.+++.+... +++|++. |+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~-d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYY-SR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEE-CC
Confidence 5899999999999999998876 4777655 44
No 192
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.40 E-value=0.41 Score=35.74 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=30.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+.++.|+|.|..|+.+++.+.+.++++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 4689999999999999999987778999999886
No 193
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.38 E-value=0.22 Score=43.19 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCC---ceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDD---VELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~---~~vvaInd~ 36 (218)
++||+|+|+|.+|..+++.+.+... .+|+. .|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v-~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMA-SSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEE-ECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEE-ECC
Confidence 5799999999999999999887641 45554 344
No 194
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.33 E-value=0.32 Score=41.23 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=27.2
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~-~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|| +.||+|+|.|.+|+.+++.+... +.+|+. .|.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~-G~~V~l-~d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFH-GFAVTA-YDI 35 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCeEEE-EeC
Confidence 54 46999999999999999998877 467665 465
No 195
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.26 E-value=0.24 Score=42.54 Aligned_cols=32 Identities=19% Similarity=0.513 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|+.+++.+.+.. .+|+.. |.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~-dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIW-NR 40 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 369999999999999999998764 666654 55
No 196
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.25 E-value=0.16 Score=44.24 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999999888875543333445565
No 197
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.24 E-value=2.2 Score=34.14 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=27.2
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+||-|.| .|.||+.+++.+++. +.+|+++.-
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK-GHEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhC-CCeEEEEEC
Confidence 47999999 799999999999987 478887764
No 198
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=90.14 E-value=0.91 Score=41.81 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
..+|+|.|||-+|+..++.+.+. +..+|+|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 36899999999999999988876 69999999974
No 199
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.06 E-value=0.27 Score=40.02 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=24.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
++||+|+|+|.+|+.+++.+.... .+++.+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~ 57 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVG 57 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEE
Confidence 368999999999999999988764 566654
No 200
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=89.99 E-value=0.85 Score=42.20 Aligned_cols=103 Identities=14% Similarity=0.263 Sum_probs=61.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC--------cChhhhhhheeeccccc-cccCccEEEeCCceEEECCE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEK 74 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~--------~~~~~~ayl~kydS~~G-~~~~~~v~~~~~~~l~i~g~ 74 (218)
.+|+|-|||.+|...++.+.+. +..+|+|.|.. .+.+.+..+.++...++ +.. .-+ .. .-+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~---~~---~~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL---KY---SKTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG---GT---CSSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh---hc---CCCce
Confidence 6899999999999999988765 58899999864 23444544433322111 111 000 00 00111
Q ss_pred EEEEEeecCCCCCCccCCCccEEEee-CCcccCHHhHHHHHhCCCCEEEE
Q 027805 75 PVTVFGVRNPEEIPWAETGAEYVVES-TGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 75 ~i~v~~~~~p~~i~W~~~gvDiVve~-tg~f~~~~~a~~h~~~GakkVii 123 (218)
.+ +++++ |. ..+||.+=| ++..++.+.++.-.+.+|| +|+
T Consensus 312 ~v------~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 312 YF------ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp EE------CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred Ee------CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 13332 64 579999988 5578888888876666785 344
No 201
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.99 E-value=0.21 Score=42.68 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||||+|+|.+|+.+++.+.+. +.+|+.. |.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~-dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVY-DI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEE-CS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEE-eC
Confidence 46999999999999999998876 4666655 54
No 202
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.99 E-value=0.29 Score=44.78 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998776 57877653
No 203
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.98 E-value=0.31 Score=42.09 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|+.+++.+... +.+|+.. |.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~-dr 62 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVW-NR 62 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEE-cC
Confidence 6999999999999999999876 4676644 55
No 204
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=89.97 E-value=0.65 Score=42.87 Aligned_cols=103 Identities=17% Similarity=0.307 Sum_probs=64.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC--------c-Chhhhhhheeecccc-ccccCccEEEeCCceEEECC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------I-TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGE 73 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~--------~-~~~~~ayl~kydS~~-G~~~~~~v~~~~~~~l~i~g 73 (218)
.+|.|-|||-+|..+++.+.+. +..+|+|.|.. . +++.+..|+++-... |... . +.+ .+ +.
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~---y~~--~~--~a 301 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-D---YAD--KF--GV 301 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-H---HHH--HH--TC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-h---ccc--cc--CC
Confidence 6899999999999999888765 69999998842 1 333444555443211 2221 0 000 01 11
Q ss_pred EEEEEEeecCCCCCCccCCCccEEEeeC-CcccCHHhHHHHHhCCCCEEEEe
Q 027805 74 KPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVIIS 124 (218)
Q Consensus 74 ~~i~v~~~~~p~~i~W~~~gvDiVve~t-g~f~~~~~a~~h~~~GakkViis 124 (218)
+.+ . ++++ | ...+|+.+-|. +..++.+.+......|+| +|+-
T Consensus 302 ~~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~E 344 (449)
T 1bgv_A 302 QFF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIE 344 (449)
T ss_dssp EEE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEEC
T ss_pred EEe---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCe-EEEe
Confidence 222 1 2333 7 46899999876 577888888877767885 4443
No 205
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.84 E-value=0.31 Score=42.17 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.|||++|+|.+|..+++++.+. +.++++ .|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~-G~~v~v-~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA-GYLLNV-FDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEeeehHHHHHHHHHHHhC-CCeEEE-EcC
Confidence 4999999999999999999986 466664 454
No 206
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=89.78 E-value=0.26 Score=45.27 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=26.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|.++||||+|+|.+|+.+++.+.+.. .+|+ +.|.
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~-v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVA-IYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEE-EEcC
Confidence 54579999999999999999998764 6654 4454
No 207
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=89.74 E-value=0.25 Score=44.08 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCce-EEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~-vvaIn 34 (218)
.+|||+|+|+||+.+++.+... +++ |++.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF-NPKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCcEEEEEC
Confidence 5899999999999999998765 475 76654
No 208
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.69 E-value=0.4 Score=40.16 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCC-CceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~-~~~vvaInd~ 36 (218)
+||+|+|+|.||..+++.+.... ..+|++ .|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~-~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYG-YDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEE-ECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEE-EeC
Confidence 48999999999999999988764 126554 455
No 209
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.66 E-value=0.32 Score=41.26 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=25.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|..+++.+.+.. .+|+.. |.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-d~ 34 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVF-DL 34 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEE-cC
Confidence 69999999999999999998774 676655 55
No 210
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.50 E-value=0.29 Score=42.78 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=25.1
Q ss_pred CCcc-EEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKV-KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~-kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
||++ ||+|+|.|.+|..++..+.+. +.+|+.++
T Consensus 12 ~m~M~kI~iIG~G~mG~~la~~L~~~-G~~V~~~~ 45 (366)
T 1evy_A 12 LLYLNKAVVFGSGAFGTALAMVLSKK-CREVCVWH 45 (366)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHTTT-EEEEEEEC
T ss_pred hhccCeEEEECCCHHHHHHHHHHHhC-CCEEEEEE
Confidence 3334 999999999999999988765 35665543
No 211
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=89.44 E-value=0.59 Score=40.41 Aligned_cols=88 Identities=20% Similarity=0.226 Sum_probs=55.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
.|++|+|. |++|+.+++.+.+. ++++++-.+|...-+ . +.|. +++.
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~VnP~~~g~--------------------------~--i~G~--~vy~-- 60 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVTPGKGGQ--------------------------N--VHGV--PVFD-- 60 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCCEEEEECTTCTTC--------------------------E--ETTE--EEES--
T ss_pred CEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeCCCCCCc--------------------------e--ECCE--eeeC--
Confidence 68899995 99999999998876 576664444520000 0 1221 2221
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE-eC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii-s~ 125 (218)
+.++++- +..+|+++.+++.....+.+...+++|++.+|+ +.
T Consensus 61 sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 61 TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1222221 125799999999887888888888889885554 44
No 212
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.41 E-value=0.28 Score=42.36 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~ 36 (218)
++||||+|+|.+|..+++.+.+.. . +|+ +.|.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~-~~dr 56 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMA-AYDA 56 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEE-EECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEE-EEcC
Confidence 479999999999999999998764 5 544 5555
No 213
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.40 E-value=0.25 Score=41.54 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+||+|+|+|.+|+.+++.+... +.+|+..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 6999999999999999998876 46776554
No 214
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.36 E-value=0.39 Score=41.01 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 185 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGA 185 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEE
Confidence 58999999999999999988764 6766554
No 215
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.35 E-value=0.33 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=25.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||+|+|+|.+|+.+++.+.... .+|+. .|.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g-~~V~~-~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG-HTVTV-WNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC-CEEEE-EeC
Confidence 379999999999999999988763 66554 444
No 216
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.26 E-value=0.29 Score=45.08 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=26.9
Q ss_pred CccEEEEEccChhHHHHHHHHHcC-CCceEEEEe
Q 027805 2 GKVKIGINGFGRIGRLVARVILQR-DDVELVAVN 34 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~-~~~~vvaIn 34 (218)
|++||+|+|+|.+|..++..+.+. ++.+|+++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 347999999999999999988765 367877763
No 217
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.21 E-value=0.31 Score=35.83 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|.|.|.|.+|+.+++.+.... .+++.+.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d 36 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVD 36 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 47999999999999999988764 5666554
No 218
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.20 E-value=0.36 Score=40.09 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=28.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|+++||-|.|.|.||+.+++.+.+. +.+|+++.-
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQ-GHEVTGLRR 34 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 6667999999999999999999887 468887754
No 219
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.09 E-value=0.31 Score=44.63 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=27.6
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCC-CceEEEEeCC
Q 027805 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (218)
Q Consensus 1 m~-~~kvgInG~GrIGr~~~r~~~~~~-~~~vvaInd~ 36 (218)
|+ ++||+|+|+|.+|..++..+.+.. +.+|+++ |.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~-d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVV-DV 38 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEE-CS
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEE-EC
Confidence 54 479999999999999999888652 5787765 44
No 220
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.98 E-value=0.43 Score=40.84 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|+|+|+|+||+.+++.+.... ++|++.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d 187 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGA 187 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEE
Confidence 68999999999999999988764 6766554
No 221
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.82 E-value=0.61 Score=35.55 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|.|+|+|++|+.+++.+.... .+++.+.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid 49 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVD 49 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 68999999999999999988764 6777764
No 222
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.80 E-value=0.33 Score=45.17 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=26.8
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|.++||||+|+|.+|..+++++.+.. .+|++. |.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~-dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAF-NR 35 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 44579999999999999999998774 676654 54
No 223
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=88.77 E-value=0.83 Score=39.51 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=56.0
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+.|+.|+|. |+.|+.+++.+.+. ++++++-.+|...-+ . +.|. +++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~---------~-------------------i~G~--~vy~- 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGS---------E-------------------VHGV--PVYD- 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTC---------E-------------------ETTE--EEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCc---------e-------------------ECCE--eeeC-
Confidence 368999995 99999999998875 577664444521000 0 1121 2221
Q ss_pred cCCCCCCccCCC-ccEEEeeCCcccCHHhHHHHHhCCCCEEEE-eC
Q 027805 82 RNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (218)
Q Consensus 82 ~~p~~i~W~~~g-vDiVve~tg~f~~~~~a~~h~~~GakkVii-s~ 125 (218)
+.++++- +.+ +|+++.+++.....+.+...+++|++.+|+ |.
T Consensus 61 -sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 61 -SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp -SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred -CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 1222220 113 799999999888888888888899985554 54
No 224
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.67 E-value=0.37 Score=41.76 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=25.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+++||+|+|.|.+|..++..+.+.. .+|+.+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 66689999999999999999887763 4555553
No 225
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=88.60 E-value=0.4 Score=41.33 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=29.3
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|+++||-|.| .|.||+.+++.+++.++.+|+++.-
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 4457999999 8999999999998876688888864
No 226
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.57 E-value=0.46 Score=40.09 Aligned_cols=31 Identities=19% Similarity=0.441 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|+.+++.+.+.. .+|+ +.|.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~-~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVT-IWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEE-EEcC
Confidence 59999999999999999998774 6766 4455
No 227
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.51 E-value=1.2 Score=38.40 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=71.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+......+++++.. +.+.+.++.+ .|. + .+++- ..+
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~----lGa----~--------~~i~~-------~~~ 226 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALARE----VGA----D--------AAVKS-------GAG 226 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHH----TTC----S--------EEEEC-------STT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHH----cCC----C--------EEEcC-------CCc
Confidence 47899999999999888876655578887743 3344433322 221 0 11110 000
Q ss_pred C-CCCC-c-cCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhHH
Q 027805 84 P-EEIP-W-AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLA 160 (218)
Q Consensus 84 p-~~i~-W-~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~La 160 (218)
. +.+. . +..++|+||||+|.-.+.+.+-..++.|-+ +++-+.....+.- ++...+.++..+...-.-+...+.
T Consensus 227 ~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~-iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~ 302 (345)
T 3jv7_A 227 AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH-ISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGTRSELM 302 (345)
T ss_dssp HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE-EEECSCCTTCCEE---ESTTTSCTTCEEECCCSCCHHHHH
T ss_pred HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE-EEEECCCCCCCCC---cCHHHHhCCCEEEEEecCCHHHHH
Confidence 0 0000 0 123899999999976555666666665543 3333332221221 222333333444444333445677
Q ss_pred HHHHHHHhh
Q 027805 161 PLAKVIHDK 169 (218)
Q Consensus 161 p~lk~L~~~ 169 (218)
.+++.+.+.
T Consensus 303 ~~~~l~~~g 311 (345)
T 3jv7_A 303 EVVALARAG 311 (345)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 777776643
No 228
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.42 E-value=0.36 Score=44.60 Aligned_cols=33 Identities=33% Similarity=0.462 Sum_probs=26.0
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|.+.||||+|+|.+|..+++.+.+. +.+|+..+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~ 45 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFN 45 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEe
Confidence 5568999999999999999999876 46766543
No 229
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.32 E-value=0.29 Score=41.31 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|..+++.+.+.. .+|+.. |.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~-dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVW-NR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEE-CS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEE-cC
Confidence 49999999999999999988763 566544 54
No 230
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=88.19 E-value=3.5 Score=38.54 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=29.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|+|-|||.+|+..++.+.+. +..+|+|.|..
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~-GakVVavsDs~ 277 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRF-GAKCITVGESD 277 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 6899999999999999988876 68999998853
No 231
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=88.14 E-value=1.6 Score=39.89 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|.|.|||-+|+..++.+.+. +..||+|.|..
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~~ 243 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDIN 243 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 6899999999999999888775 69999999974
No 232
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.13 E-value=0.52 Score=38.95 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=25.0
Q ss_pred EEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 5 kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
||||+|+|.+|..+++.+.+. +.+|+. .|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-g~~V~~-~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-GVEVVT-SLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEE-CCT
T ss_pred eEEEEechHHHHHHHHHHHHC-CCeEEE-eCC
Confidence 899999999999999999876 467666 454
No 233
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.05 E-value=0.4 Score=37.46 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|.|+|+|++|+.+++.+....+.+++++..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEEC
Confidence 58999999999999999887651367777743
No 234
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.04 E-value=0.36 Score=38.98 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=26.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|||.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~-g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR-KYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEC
Confidence 3899999999999999999876 477887753
No 235
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.86 E-value=0.28 Score=37.07 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.||+|+|+|.+|+.+++.+... +++ |.+.|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC
Confidence 5899999999999999887764 588 666665
No 236
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.75 E-value=0.5 Score=44.09 Aligned_cols=33 Identities=42% Similarity=0.749 Sum_probs=27.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCc
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI 38 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~ 38 (218)
.+|||+|+|+||+.+++.+... +++|++. |+..
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~-d~~~ 175 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVAY-DPYV 175 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CTTS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEE-CCCC
Confidence 6899999999999999998866 5787765 5543
No 237
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.65 E-value=0.59 Score=38.58 Aligned_cols=32 Identities=13% Similarity=0.248 Sum_probs=27.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++||.|.|.|.||+.+++.+.+. +.+|+++.-
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-GWRIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-TCEEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-CCEEEEEEc
Confidence 47999999999999999999887 478888764
No 238
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=87.50 E-value=0.8 Score=41.89 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=30.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
..+|+|.|||-+|+..++.+.+. +..+|+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQ-GGKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHT-TCCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEecC
Confidence 36899999999999999988876 59999999985
No 239
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.29 E-value=1.3 Score=39.02 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=72.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcC-hhhhhhheeeccccc-cccCccEEEeCCceEEECCEEEEEEee
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~-~~~~ayl~kydS~~G-~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+||+|+|.|.+|..++..+...+-+.-+.+.|...+ .+-.+ -|-.|+ .|. . .. . +...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a----~DL~~~~~~~-~-----~~--------~--i~~t 81 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEM----MDLEHGSLFL-H-----TA--------K--IVSG 81 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHH----HHHHHHGGGS-C-----CS--------E--EEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHH----HHhhhhhhcc-c-----CC--------e--EEEc
Confidence 699999999999999988877654444555665321 11111 122121 111 0 01 1 1122
Q ss_pred cCCCCCCccCCCccEEEeeCCcccC---------HHhHH-------HHH--hCCCCEEEEeCCCCC-CCeEEeecCcccc
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTD---------KDKAA-------AHL--KGGAKKVIISAPSKD-APMFVVGVNENEY 142 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~---------~~~a~-------~h~--~~GakkViis~ps~d-~p~~V~gvN~~~~ 142 (218)
.|++++. ++|+||.+.|.-.. .++++ .-. .-.+.-+++|+|.+- ++ ++. ....|
T Consensus 82 ~d~~~~~----daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~-~~~--k~sg~ 154 (330)
T 3ldh_A 82 KDYSVSA----GSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNK-QDW--KLSGL 154 (330)
T ss_dssp SSSCSCS----SCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHH-HHH--HHHCC
T ss_pred CCHHHhC----CCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHH-HHH--HHhCC
Confidence 4566554 89999999885321 11111 111 123444566666321 11 010 01122
Q ss_pred CCCCCEEEcCChhhhhHHHHHHHHHhhcCee
Q 027805 143 KPELNIVSNASCTTNCLAPLAKVIHDKFGIV 173 (218)
Q Consensus 143 ~~~~~IIs~aSCtT~~Lap~lk~L~~~fgI~ 173 (218)
. ..++| ++||+-=-+++-..|-+.+|+.
T Consensus 155 p-~~rVi--G~gt~LDs~R~~~~lA~~lgv~ 182 (330)
T 3ldh_A 155 P-MHRII--GSGCNLDSARFRYLMGERLGVH 182 (330)
T ss_dssp C-GGGEE--CCTTHHHHHHHHHHHHHHHTSC
T ss_pred C-HHHee--cccCchhHHHHHHHHHHHhCCC
Confidence 2 34666 4677755577777888888865
No 240
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.29 E-value=0.64 Score=38.73 Aligned_cols=31 Identities=35% Similarity=0.542 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|..+++.+.... .+|+.+ |.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG-HYLIGV-SR 31 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC-CEEEEE-EC
Confidence 38999999999999999988764 576655 54
No 241
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.22 E-value=0.66 Score=37.54 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=23.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+||+|+|+|.+|..+++.+.+.. .+++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 369999999999999999888763 565544
No 242
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.12 E-value=0.71 Score=37.39 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=27.9
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||+++|-|.| .|.||+.+++.+++.+..+|+++.-
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 4557899999 8999999999998875477777653
No 243
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=87.08 E-value=1.4 Score=40.36 Aligned_cols=33 Identities=24% Similarity=0.563 Sum_probs=29.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|+|.|||-+|+..++.+.+. +..+|+|.|..
T Consensus 222 ~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~~ 254 (424)
T 3k92_A 222 ARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDAN 254 (424)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 6899999999999999988765 68999999985
No 244
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.07 E-value=0.59 Score=42.74 Aligned_cols=40 Identities=18% Similarity=0.372 Sum_probs=29.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhh
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ay 45 (218)
|+ +||+|+|+|.+|..++..+.+. +.+|+++ |. +.+.+..
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~-G~~V~~~-D~--~~~~v~~ 40 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAEL-GANVRCI-DT--DRNKIEQ 40 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS--CHHHHHH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhc-CCEEEEE-EC--CHHHHHH
Confidence 53 7999999999999999998876 4677755 44 4444433
No 245
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.00 E-value=0.85 Score=39.42 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=27.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|+ +||+|+|.|.+|..++..+...+.++ +.+.|..
T Consensus 1 M~-~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di~ 35 (309)
T 1ur5_A 1 MR-KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDIV 35 (309)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeCC
Confidence 54 79999999999999988887776557 6777763
No 246
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=86.87 E-value=2 Score=37.14 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=51.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
-+|.|+|.|.||...++.+... +. +|+++. . +.+.+.++.+ .|. + .+++-+.-.+.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~-~--~~~~~~~~~~----lGa----~--------~vi~~~~~~~~~-- 225 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL-GAGRIFAVG-S--RKHCCDIALE----YGA----T--------DIINYKNGDIVE-- 225 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCSSEEEEC-C--CHHHHHHHHH----HTC----C--------EEECGGGSCHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCcEEEEEC-C--CHHHHHHHHH----hCC----c--------eEEcCCCcCHHH--
Confidence 3689999999999998887765 45 677754 3 3333333321 121 0 111100000000
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii 123 (218)
...++. +..++|+||||+|.-.+.+.+-..++.|-+-|++
T Consensus 226 ~v~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 226 QILKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HHHHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred HHHHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEe
Confidence 000000 1237999999999865566666677666533333
No 247
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.79 E-value=0.71 Score=38.03 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.+|..+++.+.+....+| .+.|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v-~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRI-YIANR 32 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEE-EEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeE-EEECC
Confidence 389999999999999998876531444 45555
No 248
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=86.72 E-value=1 Score=41.56 Aligned_cols=100 Identities=15% Similarity=0.263 Sum_probs=61.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCc--------Chhhhhhheee-ccccccccCccEEEeCCceEEECCE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--------TTDYMTYMFKY-DSVHGQWKHHELKVKDDKTLLFGEK 74 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~--------~~~~~ayl~ky-dS~~G~~~~~~v~~~~~~~l~i~g~ 74 (218)
.+|+|-|||.+|...++.+.+. +.+||++.|... +.+.+..+++. .+..|... .-.+ +.+ .+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~~~-~~g------~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DYAK-EFG------LV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HHHH-HHT------CE
T ss_pred CEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-cccc-cCC------cE
Confidence 6899999999999999988876 589999987642 33444444432 12112111 0000 001 11
Q ss_pred EEEEEeecCCCCCCccCCCccEEEee-CCcccCHHhHHHHHhCCCCE
Q 027805 75 PVTVFGVRNPEEIPWAETGAEYVVES-TGVFTDKDKAAAHLKGGAKK 120 (218)
Q Consensus 75 ~i~v~~~~~p~~i~W~~~gvDiVve~-tg~f~~~~~a~~h~~~Gakk 120 (218)
... +++ .|. ..+||.+=| ++..++.+.++.-.+.|+|-
T Consensus 307 ---~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 307 ---YLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp ---EEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred ---Eec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 111 222 254 589999987 56778888888777778854
No 249
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.30 E-value=0.54 Score=39.49 Aligned_cols=30 Identities=23% Similarity=0.538 Sum_probs=24.3
Q ss_pred EEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 5 kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
||+|+|+|.+|+.+++.+.... .+|+. .|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~~-~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLII-YDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEEE-ECS
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 8999999999999999988763 56654 454
No 250
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=86.09 E-value=1.8 Score=37.38 Aligned_cols=129 Identities=11% Similarity=0.222 Sum_probs=71.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+... +.+++++... .+.+.++.+ .|. + .+ + .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~---~~~~~~~~~----lGa----------~-~v-~----------~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARN---EHKKQDALS----MGV----------K-HF-Y----------TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEECSS---STTHHHHHH----TTC----------S-EE-E----------SS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCC---HHHHHHHHh----cCC----------C-ee-c----------CC
Confidence 4789999999999998888766 4688877532 233323321 221 1 11 1 12
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC-CCCCeEEeecCc-ccc-CCCCCEEEcCChhhhhHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNE-NEY-KPELNIVSNASCTTNCLA 160 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps-~d~p~~V~gvN~-~~~-~~~~~IIs~aSCtT~~La 160 (218)
++.+. .++|+||||+|.-...+.+-..++.|-+-|++..++ ...+. +|. +.+ .++..+...-.-+..-+.
T Consensus 228 ~~~~~---~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~----~~~~~~~~~~~~~i~g~~~~~~~~~~ 300 (348)
T 3two_A 228 PKQCK---EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPV----LSVFDFIHLGNRKVYGSLIGGIKETQ 300 (348)
T ss_dssp GGGCC---SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCE----EEHHHHHHTCSCEEEECCSCCHHHHH
T ss_pred HHHHh---cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCccc----CCHHHHHhhCCeEEEEEecCCHHHHH
Confidence 22222 289999999998766666666665554333332232 22221 121 122 334456655444556677
Q ss_pred HHHHHHHhh
Q 027805 161 PLAKVIHDK 169 (218)
Q Consensus 161 p~lk~L~~~ 169 (218)
.+++.+.+.
T Consensus 301 ~~~~l~~~g 309 (348)
T 3two_A 301 EMVDFSIKH 309 (348)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 777777643
No 251
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=85.98 E-value=0.29 Score=41.25 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=27.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|+|.+|..+++++.+. +.+|++++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT-TCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC-CCEEEEecCH
Confidence 47999999999999999999876 4788877653
No 252
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.91 E-value=0.95 Score=35.96 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=24.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+||+|+| .|.+|+.+++.+.+.. .+++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~ 31 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGS 31 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 3899999 9999999999988764 6777654
No 253
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=85.79 E-value=0.49 Score=40.88 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQR 25 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~ 25 (218)
|+++||+|+|.|.+|..++..+.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 4457999999999999999988754
No 254
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.74 E-value=0.74 Score=40.76 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=25.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|| +||+|+|.|.+|..++..+....+.+|+.+.
T Consensus 1 ~~-mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MT-VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CC-ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 44 6999999999999998887654356776554
No 255
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=85.59 E-value=0.78 Score=42.80 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|||+|+|+||+.+++.+... +++|++. |+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~-G~~V~v~-d~ 308 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL-GATVWVT-EI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEE-eC
Confidence 6899999999999999998866 4776654 55
No 256
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.50 E-value=0.88 Score=37.68 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+||+|+|+|.+|..+++.+.+.. .+|+.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG-HEVQGWL 30 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CCEEEEE
Confidence 38999999999999999988764 5766654
No 257
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=85.25 E-value=0.89 Score=39.25 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=27.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|||+|+|.+|+.+++++....+++-|.+.|.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 689999999999999999876534656677776
No 258
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.21 E-value=0.8 Score=39.08 Aligned_cols=29 Identities=31% Similarity=0.515 Sum_probs=23.7
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.||+|+| +|.||..+++.+.... .+|+.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~ 51 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISIL 51 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEE
Confidence 5899999 9999999999987663 565544
No 259
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=85.04 E-value=3.1 Score=35.77 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=67.6
Q ss_pred EEEEEccChhHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 5 KIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 5 kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
+|.|+|.|.+|...++.+... +. +++++.- +.+.+.++.++ .. .+++-+.-.+.+ .
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~---~~~~~~~~~~l-a~----------------~v~~~~~~~~~~--~ 223 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRAS-GAGPILVSDP---NPYRLAFARPY-AD----------------RLVNPLEEDLLE--V 223 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCSEEEECS---CHHHHGGGTTT-CS----------------EEECTTTSCHHH--H
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCCEEEEECC---CHHHHHHHHHh-HH----------------hccCcCccCHHH--H
Confidence 689999999999999887765 46 7777653 23333333211 10 011100000000 0
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCc-c-ccCCCCCEEEcCCh-hhhhHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE-N-EYKPELNIVSNASC-TTNCLA 160 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~-~-~~~~~~~IIs~aSC-tT~~La 160 (218)
..++. ..++|+|||++|...+.+.+-..++.|- +++.-+.... +. .+|. . .+.++..++..-.. +...+.
T Consensus 224 ~~~~~--~~g~D~vid~~g~~~~~~~~~~~l~~~G-~iv~~g~~~~-~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 296 (343)
T 2dq4_A 224 VRRVT--GSGVEVLLEFSGNEAAIHQGLMALIPGG-EARILGIPSD-PI---RFDLAGELVMRGITAFGIAGRRLWQTWM 296 (343)
T ss_dssp HHHHH--SSCEEEEEECSCCHHHHHHHHHHEEEEE-EEEECCCCSS-CE---EECHHHHTGGGTCEEEECCSCCTTHHHH
T ss_pred HHHhc--CCCCCEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCC-Cc---eeCcHHHHHhCceEEEEeecCCCHHHHH
Confidence 00000 1379999999997444555555665544 3333332222 21 2332 2 22233445543222 456677
Q ss_pred HHHHHHHhh
Q 027805 161 PLAKVIHDK 169 (218)
Q Consensus 161 p~lk~L~~~ 169 (218)
-+++.+.+.
T Consensus 297 ~~~~l~~~g 305 (343)
T 2dq4_A 297 QGTALVYSG 305 (343)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 778877654
No 260
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=85.02 E-value=0.94 Score=40.46 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=28.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|+|.|||.||+.+++.+... +.+|+ +.|+.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeCC
Confidence 5899999999999999988877 58888 88874
No 261
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.27 E-value=0.17 Score=41.09 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=23.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVA 32 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vva 32 (218)
.+||+|+|+|.||+.+++.+.... .+++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V~~ 47 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSVVF 47 (201)
Confidence 469999999999999999887653 45443
No 262
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.96 E-value=1.3 Score=34.26 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=28.1
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|+.+||-|.| .|.||+.+++.+.+.+ .+|+++.-
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 5557999999 7999999999998874 78877754
No 263
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.89 E-value=1.2 Score=39.91 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=29.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhh
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDY 42 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~ 42 (218)
.+|+|.|+|.+|+.+++.+.+. +.+|+ +.|+ +++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVv-v~D~--~~~~ 208 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLV-VTDV--NKAA 208 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECS--CHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEE-EEcC--CHHH
Confidence 6899999999999999999877 47888 8886 4443
No 264
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=84.80 E-value=0.97 Score=38.98 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=25.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|.+||+|+|.|.+|..+++.+.+.. .+|+.++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEe
Confidence 3589999999999999999988763 5665543
No 265
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.74 E-value=1.2 Score=43.62 Aligned_cols=145 Identities=17% Similarity=0.275 Sum_probs=76.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhh-------heeeccccccccCccEEEeCCceEEECCEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY-------MFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ay-------l~kydS~~G~~~~~~v~~~~~~~l~i~g~~i 76 (218)
.||||+|.|.+|+-++..+.+. +++|+ +.|+ +.+.+.. .++-....++.. . .. .. . ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~-l~D~--~~~~l~~~~~~i~~~l~~~~~~~~~~-~-----~~-~~-~--~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVV-AVES--DPKQLDAAKKIITFTLEKEASRAHQN-G-----QA-SA-K--PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEE-EECS--SHHHHHHHHHHHHHHHHHHHHHHHTT-T-----CC-CC-C--CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchh-cccc--hHhhhhhHHHHHHHHHHHHHHhcccc-c-----hh-hh-h--hhh
Confidence 5999999999999999887766 57766 4465 3332211 111100011111 0 00 00 1 122
Q ss_pred EEEeecCCCCCCccCCCccEEEeeCCcccCHH-----hHHHHHhCCCCEEEEeCCCC----------CCCeEEee---cC
Q 027805 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKD-----KAAAHLKGGAKKVIISAPSK----------DAPMFVVG---VN 138 (218)
Q Consensus 77 ~v~~~~~p~~i~W~~~gvDiVve~tg~f~~~~-----~a~~h~~~GakkViis~ps~----------d~p~~V~g---vN 138 (218)
.. ..+.+.+. ++|+||||...-...+ +...+...++ ++-|+.|. +.|--+.| .|
T Consensus 383 ~~--~~~~~~l~----~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RF--SSSTKELS----TVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EE--ESCGGGGG----SCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred cc--cCcHHHHh----hCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 22 23344443 8999999987544443 2345555566 88888763 23422222 23
Q ss_pred ccccCCCCCEEEcCChhhhhHHHHHHHHHhhcC
Q 027805 139 ENEYKPELNIVSNASCTTNCLAPLAKVIHDKFG 171 (218)
Q Consensus 139 ~~~~~~~~~IIs~aSCtT~~Lap~lk~L~~~fg 171 (218)
+-.+-+--.||..+...-..++-+.... +..|
T Consensus 455 P~~~m~LVEvi~g~~Ts~e~~~~~~~~~-~~lg 486 (742)
T 3zwc_A 455 PAHVMRLLEVIPSRYSSPTTIATVMSLS-KKIG 486 (742)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHH-HHTT
T ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHH-HHhC
Confidence 3222222357777776666666665554 3444
No 266
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.73 E-value=1.1 Score=38.03 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+.||+|+|.|.+|..++..+... +.+|+.+ |.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~-d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLV-DQ 46 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 36899999999999999988876 4676644 54
No 267
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.62 E-value=0.96 Score=41.92 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=26.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
++||+|+|+|.+|..++..+.+.++. +|+.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 47999999999999999998887456 777663
No 268
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.58 E-value=0.64 Score=39.20 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCC----C-ceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~----~-~~vvaIn 34 (218)
++||+|+|.|.+|..++..+.+.+ + .+|+.++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 369999999999999999887651 3 5766654
No 269
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=84.35 E-value=1.1 Score=35.57 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=26.5
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|+.+|.|.| .|.||+.+++.+.+..+.+|+++.-
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec
Confidence 334599999 8999999999998334578887754
No 270
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.07 E-value=0.95 Score=39.50 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=29.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl 46 (218)
+.||||+|.|.+|..++..+... +++|+. .|+ +++.+..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G~~V~l-~d~--~~~~~~~~ 45 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKL-YDI--EPRQITGA 45 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEE-ECS--CHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC--CHHHHHHH
Confidence 46999999999999999998876 467654 465 45444333
No 271
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=84.05 E-value=0.77 Score=42.68 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=25.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|||+|+|+||+.+++.+... +++|++. |+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~-G~~Viv~-d~ 288 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL-GARVYIT-EI 288 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-cCEEEEE-eC
Confidence 6899999999999999998766 4776655 44
No 272
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.04 E-value=0.98 Score=39.21 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=26.3
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45799999999999998888776543444555565
No 273
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=83.84 E-value=0.92 Score=40.08 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=27.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ 43 (218)
.||||+|+|.||..+++.+.... .+|++. |. +.+.+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G-~~V~~~-dr--~~~~~ 44 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN-HSVFGY-NR--SRSGA 44 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEE-CS--CHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CEEEEE-eC--CHHHH
Confidence 69999999999999999998764 666654 44 44444
No 274
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=83.45 E-value=3.8 Score=34.08 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|-|+|.|.+|...++.+++.+ .+|+.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999998764 5666554
No 275
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=83.28 E-value=0.98 Score=39.43 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|+|.||+.+++.+.... ++++. .|.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~-~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTV-GLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEE-ECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEE-EEC
Confidence 68999999999999999988764 67654 444
No 276
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=83.03 E-value=1.2 Score=41.04 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|+|+||+.+++.+... +++|++ .|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~-Ga~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF-GARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-ECC
Confidence 6899999999999999998876 477554 565
No 277
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=82.69 E-value=1.2 Score=39.95 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=77.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhhee-eccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~~~~~~~~ayl~k-ydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
+||+|+|.|.||+.+++.+.+.+++ ..|.+.+. +.+....+.+ +... + . ..+. .+.++ +
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~~l~~~-~--~-~~~~-----~~~~D-----~--- 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQSIKAK-G--Y-GEID-----ITTVD-----A--- 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHHHHHHT-T--C-CCCE-----EEECC-----T---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHHhhhh-c--C-CceE-----EEEec-----C---
Confidence 5999999999999999999988765 45556554 3333222211 1100 0 0 0000 01111 0
Q ss_pred cCCCCCC--ccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCC--CCCCeEEeecCccccC-----CCCCEEEcC
Q 027805 82 RNPEEIP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS--KDAPMFVVGVNENEYK-----PELNIVSNA 152 (218)
Q Consensus 82 ~~p~~i~--W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps--~d~p~~V~gvN~~~~~-----~~~~IIs~a 152 (218)
.+++++. ..+.++|+||.|+|.+...+-+...+++|+. ++-++.. .+...+.+.-- ..+. ....++.+.
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~-vvD~a~~~~~~~~~~~~~~~-~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP-YLDTANYEHPDLAKFEYKEQ-WAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC-EEESSCCBCTTCSCBCSHHH-HTTHHHHHHHTCEEEECC
T ss_pred CCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC-EEEecCCCCcccchhhhHHH-HHHHHHHHHhCCEEEEcC
Confidence 1111110 1112479999999998877777778888885 3322221 11111211110 0111 124567777
Q ss_pred ChhhhhHHHHHHHHHhh-cC-eeEEEE
Q 027805 153 SCTTNCLAPLAKVIHDK-FG-IVEGLM 177 (218)
Q Consensus 153 SCtT~~Lap~lk~L~~~-fg-I~~~~~ 177 (218)
+|.-.....++..+.++ |+ ++.+.+
T Consensus 141 G~~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 141 GFDPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp BTTTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCccHHHHHHHHHHHhccCcccEEEE
Confidence 76555444445555553 55 565554
No 278
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.56 E-value=1.4 Score=37.90 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=25.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++||+|+|.|.+|..++..+.+.. .+|+.+.-
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 379999999999999998887653 56666643
No 279
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.47 E-value=1.3 Score=41.14 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+|+|+|+|+||+.+++.+... +++|++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf-Ga~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA-GARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999998776 4676644
No 280
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=82.39 E-value=1.4 Score=40.42 Aligned_cols=39 Identities=31% Similarity=0.382 Sum_probs=28.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl 46 (218)
++||+|+|+|.+|..++..+.+ +.+|+++ |. +.+.+..+
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~-D~--~~~~v~~l 74 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVAL-DI--VQAKVDML 74 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEE-CS--CHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEE-ec--CHHHhhHH
Confidence 3699999999999999887765 6887765 44 44544333
No 281
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.31 E-value=1.3 Score=35.07 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.2
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++||-|.| .|.||+.+++.+.+.+ .+|+++.-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 47999999 8999999999999874 78877754
No 282
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=82.28 E-value=1.8 Score=39.54 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=30.3
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
..+|+|.|||-+|+..++.+.++.+.++|+|.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 36899999999999999988773479999999974
No 283
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=82.18 E-value=1.6 Score=37.56 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=27.0
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 1 m~-~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|+ ++||+|+|.|.+|..++..+...+..+ |.+.|..
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~-V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLAD-VVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCce-EEEEeCC
Confidence 53 479999999999999999887664336 5555653
No 284
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=82.03 E-value=2 Score=34.21 Aligned_cols=35 Identities=14% Similarity=0.224 Sum_probs=29.0
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCC-CceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~-~~~vvaInd 35 (218)
|++++|-|.| .|.||+.+++.+.+.+ +.+|+++.-
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 3457899999 8999999999999875 688887754
No 285
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=81.83 E-value=2 Score=37.37 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=27.8
Q ss_pred CC-ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 1 m~-~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|+ ++||+|+|.|.+|..++..+...+.++ |.+.|..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~ 37 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIV 37 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCC
Confidence 53 469999999999999888887765447 6677764
No 286
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=81.59 E-value=1 Score=39.47 Aligned_cols=92 Identities=14% Similarity=0.233 Sum_probs=52.7
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
-+|.|+| .|.+|...++.+....+.+++++.. +.+.+.++.+ .|. + .+++-.. .+ . .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa----d--------~vi~~~~-~~-~-~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA----H--------HVIDHSK-PL-A-A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC----C--------EEEeCCC-CH-H-H
Confidence 3688999 9999999888776544578887754 3344433322 221 1 1122100 00 0 0
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAK 119 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Gak 119 (218)
...++ ...++|+||||+|.-...+.+...++.|-+
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~ 265 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGR 265 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCE
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCE
Confidence 01112 234899999999976555666667766653
No 287
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=81.54 E-value=1.6 Score=37.76 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=45.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
.||||+|+|.+|..+++++. . +++|+.. |. +++.+..+.+. +. ... .++ ++. ..+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~-d~--~~~~~~~~~~~------l~-~~~---------~~~--i~~--~~~ 67 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQ-DV--SEKALEAAREQ------IP-EEL---------LSK--IEF--TTT 67 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEE-CS--CHHHHHHHHHH------SC-GGG---------GGG--EEE--ESS
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEE-EC--CHHHHHHHHHH------HH-HHH---------hCC--eEE--eCC
Confidence 69999999999999999998 5 6787655 44 44444333322 01 000 000 111 134
Q ss_pred CCCCCccCCCccEEEeeCCcccC
Q 027805 84 PEEIPWAETGAEYVVESTGVFTD 106 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~ 106 (218)
++.+ .++|+||||.+.-..
T Consensus 68 ~~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 68 LEKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp CTTG----GGCSEEEECCCSCHH
T ss_pred HHHH----cCCCEEEEcCcCCHH
Confidence 5433 389999999996554
No 288
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.52 E-value=1.5 Score=38.28 Aligned_cols=133 Identities=10% Similarity=0.154 Sum_probs=67.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|.|.|.||...++.+... +.+++++... .+.+..+. .. +|. + .+++-.. +..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~---~~~~~~~~--~~-lGa----~--------~v~~~~~-----~~~ 244 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTS---PSKKEEAL--KN-FGA----D--------SFLVSRD-----QEQ 244 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESC---GGGHHHHH--HT-SCC----S--------EEEETTC-----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC---HHHHHHHH--Hh-cCC----c--------eEEeccC-----HHH
Confidence 4789999999999999988766 4687777532 22222221 01 221 1 0111000 000
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCcc-ccCCCCCEEEcCChhhhhHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~-~~~~~~~IIs~aSCtT~~Lap~ 162 (218)
..++. .++|+||||+|.-.+.+.+-..++.|.+-|.+..++ .+. .++.. .+.++..+...-..+...+.-+
T Consensus 245 ~~~~~---~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~---~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 316 (366)
T 1yqd_A 245 MQAAA---GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPE--KPL---ELPAFSLIAGRKIVAGSGIGGMKETQEM 316 (366)
T ss_dssp HHHTT---TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCS--SCE---EECHHHHHTTTCEEEECCSCCHHHHHHH
T ss_pred HHHhh---CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCC--CCC---CcCHHHHHhCCcEEEEecCCCHHHHHHH
Confidence 01111 279999999997655555556666554223332222 221 12322 2223344554433344556666
Q ss_pred HHHHHh
Q 027805 163 AKVIHD 168 (218)
Q Consensus 163 lk~L~~ 168 (218)
++.+.+
T Consensus 317 ~~l~~~ 322 (366)
T 1yqd_A 317 IDFAAK 322 (366)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 776654
No 289
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.31 E-value=1.2 Score=40.32 Aligned_cols=36 Identities=31% Similarity=0.719 Sum_probs=28.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ 43 (218)
.+|-|+|+||+|+.+++.+... +.++++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~---d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDH---DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEEC---CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHH
Confidence 5799999999999999999876 478887753 45544
No 290
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=81.23 E-value=1.6 Score=37.85 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=28.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+++|+|.|.+|+.+++++.....++.+.|.|.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 589999999999999999886445788888886
No 291
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=81.00 E-value=1.5 Score=36.93 Aligned_cols=35 Identities=31% Similarity=0.578 Sum_probs=27.7
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCC-CceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~-~~~vvaInd 35 (218)
|+.+||-|-| .|.||+.+++.+.+.. +.+|+++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 6557999999 8999999999998764 578887753
No 292
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=80.99 E-value=1.3 Score=37.60 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+||+|+|+|.+|..+++.+.+.. .+|+.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 38999999999999999887653 5666554
No 293
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=80.90 E-value=1.4 Score=37.62 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=26.9
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|.++||.|.| .|.||+.+++.+++.+ .+|+++.-.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 3346899999 7999999999998875 677777543
No 294
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=80.72 E-value=1.9 Score=36.01 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.2
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|| +||-|.| .|.||+.+++.+.+.+ .+|+++.-
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 54 7999999 8999999999999874 67777754
No 295
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.51 E-value=1.3 Score=40.66 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|..+++.+.+.. .+|+ +.|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~-v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVC-AFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEE-EECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEE-EEeC
Confidence 58999999999999999998764 6655 4454
No 296
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=80.35 E-value=2.6 Score=36.80 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=26.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|+++||+|+|.|.+|..++..+...+-.+|+ +.|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~-l~Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVV-LFDI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEE-EECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEE-EEeC
Confidence 6568999999999999998888766422544 5555
No 297
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=80.27 E-value=5.9 Score=33.98 Aligned_cols=138 Identities=13% Similarity=0.117 Sum_probs=67.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
-+|.|+|.|.+|...++.+... +. +++++.- +.+.+..+.+ .|. + .+++-+.-.+.+.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~---~~~~~~~~~~----~Ga----~--------~~~~~~~~~~~~~- 227 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEP---SDFRRELAKK----VGA----D--------YVINPFEEDVVKE- 227 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSEEEECS---CHHHHHHHHH----HTC----S--------EEECTTTSCHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEECC---CHHHHHHHHH----hCC----C--------EEECCCCcCHHHH-
Confidence 3789999999999999988766 45 7776643 3333333321 120 0 1111000000000
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCc-c-ccCCCCCEEEcCChh-hhhH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNE-N-EYKPELNIVSNASCT-TNCL 159 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~-~-~~~~~~~IIs~aSCt-T~~L 159 (218)
..++. ...++|+||||+|.....+.+-..++.|- +++.-+.... + ..++. . .+.++..++..-.-+ ...+
T Consensus 228 -v~~~~-~g~g~D~vid~~g~~~~~~~~~~~l~~~G-~iv~~g~~~~-~---~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 300 (348)
T 2d8a_A 228 -VMDIT-DGNGVDVFLEFSGAPKALEQGLQAVTPAG-RVSLLGLYPG-K---VTIDFNNLIIFKALTIYGITGRHLWETW 300 (348)
T ss_dssp -HHHHT-TTSCEEEEEECSCCHHHHHHHHHHEEEEE-EEEECCCCSS-C---CCCCHHHHTTTTTCEEEECCCCCSHHHH
T ss_pred -HHHHc-CCCCCCEEEECCCCHHHHHHHHHHHhcCC-EEEEEccCCC-C---cccCchHHHHhCCcEEEEecCCCcHHHH
Confidence 00000 11379999999996444455555665544 2333232222 1 12332 2 223344455432223 4567
Q ss_pred HHHHHHHHhh
Q 027805 160 APLAKVIHDK 169 (218)
Q Consensus 160 ap~lk~L~~~ 169 (218)
.-+++.+.+.
T Consensus 301 ~~~~~l~~~g 310 (348)
T 2d8a_A 301 YTVSRLLQSG 310 (348)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 7777777653
No 298
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=80.19 E-value=1.3 Score=40.66 Aligned_cols=31 Identities=19% Similarity=0.431 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||||+|+|.+|..+++.+.+.. .+|+. .|.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v-~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAV-FNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEE-ECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEE-EeC
Confidence 48999999999999999998764 66554 444
No 299
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=80.11 E-value=2.5 Score=36.78 Aligned_cols=34 Identities=35% Similarity=0.424 Sum_probs=27.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
++||+|+|.|.+|..++..+...+.++ |.+.|..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 469999999999999988887765447 6677763
No 300
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.84 E-value=5.9 Score=34.91 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA-GASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEC
Confidence 4789999999999998888766 45 777664
No 301
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=79.62 E-value=4.5 Score=35.02 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=66.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec-
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR- 82 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~- 82 (218)
-+|.|+|.|.+|...++.+... +.+++++... .+.+.++.+ +|. + .+++- .+.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~---~~~~~~~~~----lGa----~--------~v~~~------~~~~ 234 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYVISRS---SRKREDAMK----MGA----D--------HYIAT------LEEG 234 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESS---STTHHHHHH----HTC----S--------EEEEG------GGTS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCC---HHHHHHHHH----cCC----C--------EEEcC------cCch
Confidence 4799999999999988877655 4677777532 222222211 221 0 11110 000
Q ss_pred CC-CCCCccCCCccEEEeeCCc--ccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCcc-ccCCCCCEEEcCChhhhh
Q 027805 83 NP-EEIPWAETGAEYVVESTGV--FTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNC 158 (218)
Q Consensus 83 ~p-~~i~W~~~gvDiVve~tg~--f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~-~~~~~~~IIs~aSCtT~~ 158 (218)
+. +.+. .++|+||||+|. ....+.+-..++.|- +++.-+.....+. ++.. .+.++..+......+...
T Consensus 235 ~~~~~~~---~~~D~vid~~g~~~~~~~~~~~~~l~~~G-~iv~~g~~~~~~~----~~~~~~~~~~~~i~g~~~~~~~~ 306 (360)
T 1piw_A 235 DWGEKYF---DTFDLIVVCASSLTDIDFNIMPKAMKVGG-RIVSISIPEQHEM----LSLKPYGLKAVSISYSALGSIKE 306 (360)
T ss_dssp CHHHHSC---SCEEEEEECCSCSTTCCTTTGGGGEEEEE-EEEECCCCCSSCC----EEECGGGCBSCEEEECCCCCHHH
T ss_pred HHHHHhh---cCCCEEEECCCCCcHHHHHHHHHHhcCCC-EEEEecCCCCccc----cCHHHHHhCCeEEEEEecCCHHH
Confidence 00 1111 389999999997 444444445555444 2333232221211 2221 222234455544444566
Q ss_pred HHHHHHHHHhh
Q 027805 159 LAPLAKVIHDK 169 (218)
Q Consensus 159 Lap~lk~L~~~ 169 (218)
+.-+++.+.+.
T Consensus 307 ~~~~~~l~~~g 317 (360)
T 1piw_A 307 LNQLLKLVSEK 317 (360)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 77777777653
No 302
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=79.40 E-value=1.5 Score=40.63 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=25.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
..||||+|+|.+|..+++++.+. +.+|+..+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~d 40 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYN 40 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEe
Confidence 47999999999999999999877 46766443
No 303
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=78.88 E-value=1.5 Score=37.48 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=23.6
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+ +||+|+|.|.+|..++..+.... .+|+.+.
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~ 32 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGLYYGALLQRSG-EDVHFLL 32 (312)
T ss_dssp ----CEEEECCSTTHHHHHHHHHHTS-CCEEEEC
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHCC-CeEEEEE
Confidence 43 79999999999999998887653 5666554
No 304
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.82 E-value=1.8 Score=38.97 Aligned_cols=36 Identities=28% Similarity=0.531 Sum_probs=27.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhh
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ 43 (218)
|||+|+|+|.+|..++..+.+. +.+|+++ |. +.+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~-G~~V~~~-d~--~~~~~ 36 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR-GHEVIGV-DV--SSTKI 36 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEE-CS--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEE-EC--CHHHH
Confidence 3899999999999999988876 4676655 44 44444
No 305
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.79 E-value=1.9 Score=39.48 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=30.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl 46 (218)
.|||-|.|+|++|+.+++.|... +.+++.|.. +++.+..+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDK---DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEES---CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 47999999999999999988655 577777743 55554333
No 306
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=78.65 E-value=2.3 Score=38.77 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=25.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..||+|+|.|.+|..++..+... +.+|+.+ |.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~-D~ 68 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAV-ES 68 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEE-EC
Confidence 36899999999999999988876 4776654 54
No 307
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=78.64 E-value=1.9 Score=36.03 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=26.5
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+.+||-|.| .|.||+.+++.+++. +.+++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~-g~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQR-GDVELVLR 34 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC-TTEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEe
Confidence 6667999999 899999999999876 46766653
No 308
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=78.55 E-value=1.9 Score=38.62 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|||+|+|+|.+|..++..+.+ +.+|+++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~--G~~V~~~d 29 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL--QNEVTIVD 29 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHhC--CCEEEEEE
Confidence 389999999999999988876 57877663
No 309
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=78.54 E-value=1.8 Score=35.96 Aligned_cols=30 Identities=27% Similarity=0.254 Sum_probs=24.4
Q ss_pred EEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 5 kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|++|+|+|.+|+.+++.+.+.+ .++ .+.|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v-~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEV-WVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCE-EEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEE-EEEEC
Confidence 7999999999999999998775 454 45554
No 310
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=78.53 E-value=2.5 Score=37.06 Aligned_cols=30 Identities=27% Similarity=0.477 Sum_probs=26.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.||+|+|.|.+|+.+++++... ++++++++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d 44 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLD 44 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEe
Confidence 5899999999999999999876 58988885
No 311
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.49 E-value=2.1 Score=39.39 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=26.9
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+.||.|+|.|.+|+.+++.+.+.++.+|+.++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~ 54 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVAC 54 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEE
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999999999999988677866554
No 312
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=78.44 E-value=1.1 Score=37.99 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=22.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
|+ +||+|+|.|.+|..++..+.+.. .+|+.+
T Consensus 1 M~-mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~ 31 (294)
T 3g17_A 1 MS-LSVAIIGPGAVGTTIAYELQQSL-PHTTLI 31 (294)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHHC-TTCEEE
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHCC-CeEEEE
Confidence 53 79999999999999988887543 344444
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=78.40 E-value=5.5 Score=34.75 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=23.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaI 33 (218)
-+|.|+|.|.+|...++.+... +. +++++
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~ 213 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLA-GATTVILS 213 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEE
Confidence 4789999999999998887766 45 66655
No 314
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.35 E-value=2.1 Score=39.33 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|+|+||+.+++.+... +++|++ .|.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC
Confidence 5899999999999999998776 467554 554
No 315
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=78.25 E-value=2.7 Score=32.82 Aligned_cols=31 Identities=35% Similarity=0.486 Sum_probs=26.6
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|||.|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 3899999 8999999999999874 78888764
No 316
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=78.16 E-value=2.1 Score=37.82 Aligned_cols=30 Identities=27% Similarity=0.304 Sum_probs=23.8
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
++||+|+|.|.+|..++..+.+.. .+|...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~ 58 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLW 58 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999888763 454433
No 317
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.12 E-value=1.2 Score=39.08 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=19.5
Q ss_pred cEEEEEccChhHHHHHHHHHcC
Q 027805 4 VKIGINGFGRIGRLVARVILQR 25 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~ 25 (218)
+||+|+|.|.+|..++..+.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc
Confidence 6999999999999999888654
No 318
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=77.81 E-value=2.4 Score=35.90 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +.+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNA-GYVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEE
Confidence 4789999999999998887665 46888887
No 319
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=77.64 E-value=3 Score=37.05 Aligned_cols=33 Identities=18% Similarity=0.445 Sum_probs=28.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..||+|+|-|..|+.+++++.+. +++++++.++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d~~ 56 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL-NIQVNVLDAD 56 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEEEST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 57999999999999999998875 5888888743
No 320
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=77.44 E-value=2.4 Score=38.57 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=25.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|++.+|.|.|.|.+|+.+++.+.+. +.+|+.++
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~-G~~V~v~~ 33 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDS-GIKVTVAC 33 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTT-TCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-cCEEEEEE
Confidence 6557999999999999999999865 47755443
No 321
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=77.35 E-value=2.2 Score=33.24 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
.+||-|.| .|.||+.+++.+.+.+.+ +|+++.
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46899999 999999999999988643 777654
No 322
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=77.30 E-value=4.5 Score=35.09 Aligned_cols=151 Identities=10% Similarity=0.102 Sum_probs=75.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+... +.+++++.. +.+.+.++.+ .|. + .+++...-.+.+ .
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~---~~~~~~~~~~----lGa----------~--~vi~~~~~~~~~--~ 248 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIVTSS---SREKLDRAFA----LGA----------D--HGINRLEEDWVE--R 248 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEEEES---CHHHHHHHHH----HTC----------S--EEEETTTSCHHH--H
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEec---CchhHHHHHH----cCC----------C--EEEcCCcccHHH--H
Confidence 4799999999999998888766 468887753 3333333321 121 0 111100000000 0
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccc-cCCCCCEEEcCChhhhhHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~-~~~~~~IIs~aSCtT~~Lap~ 162 (218)
..++ -...++|+||||+| ....+.+-..++.|-+-|++..++.. .. .++... +.++..+...-..+...+..+
T Consensus 249 v~~~-~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~--~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 322 (363)
T 3uog_A 249 VYAL-TGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGF--EV--SGPVGPLLLKSPVVQGISVGHRRALEDL 322 (363)
T ss_dssp HHHH-HTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCSSC--EE--CCBTTHHHHTCCEEEECCCCCHHHHHHH
T ss_pred HHHH-hCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCCCc--cc--CcCHHHHHhCCcEEEEEecCCHHHHHHH
Confidence 0000 01237999999999 44556666666655433333333221 11 122221 222344554444455677777
Q ss_pred HHHHHhhcCeeEEEEEEEeccC
Q 027805 163 AKVIHDKFGIVEGLMTTVHSIT 184 (218)
Q Consensus 163 lk~L~~~fgI~~~~~Ttvha~t 184 (218)
++.+.+. .++. .++......
T Consensus 323 ~~l~~~g-~l~~-~i~~~~~l~ 342 (363)
T 3uog_A 323 VGAVDRL-GLKP-VIDMRYKFT 342 (363)
T ss_dssp HHHHHHH-TCCC-CEEEEEEGG
T ss_pred HHHHHcC-CCcc-ceeeEEcHH
Confidence 7777654 4543 445444443
No 323
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=77.17 E-value=3 Score=32.78 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=25.9
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+++. +.+|+++.-
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R 32 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVR 32 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEe
Confidence 799999 799999999999987 478888754
No 324
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=76.60 E-value=2.9 Score=34.68 Aligned_cols=30 Identities=23% Similarity=0.447 Sum_probs=25.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|||-|-| .|.||+.+++.+.+. +.+|+++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-GHEVTLVS 31 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 4899999 799999999999887 47888875
No 325
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=76.15 E-value=3.2 Score=36.40 Aligned_cols=30 Identities=27% Similarity=0.532 Sum_probs=26.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.||+|+|.|.+|+.+++++.+. +++++++.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l-G~~viv~d 42 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM-GYKVVVLD 42 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 6899999999999999999877 58888874
No 326
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=76.13 E-value=2.2 Score=35.31 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=26.4
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|.|.| .|.||+.+++.+++.+ .+++++.-
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 47899999 7999999999999874 67776643
No 327
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=76.09 E-value=6.7 Score=34.61 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=27.8
Q ss_pred ccEEEEEc-cChhHHHHHHH--HHcCCCceEEEEeCCC
Q 027805 3 KVKIGING-FGRIGRLVARV--ILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~--~~~~~~~~vvaInd~~ 37 (218)
..||-|.| .|+.++.++.. +.++++.++|+.-+|.
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~ 47 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPF 47 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTT
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCC
Confidence 36899999 68888777776 3466789999999985
No 328
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=75.35 E-value=2.8 Score=35.46 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=27.8
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++||-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 347999999 8999999999998874 78887764
No 329
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=75.10 E-value=3.5 Score=36.09 Aligned_cols=35 Identities=26% Similarity=0.319 Sum_probs=25.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|+++||+|+|.|.+|..++..+...+..+| .+.|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v-~L~Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDV-VLFDI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEE-EEECS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeE-EEEeC
Confidence 556799999999999999888876642254 45555
No 330
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=74.92 E-value=3.3 Score=35.32 Aligned_cols=32 Identities=34% Similarity=0.512 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCC-ceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~-~~vvaInd~ 36 (218)
+||+|+|.|.+|..++..+...+- -+|+ +.|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~-l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYV-FIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEcC
Confidence 599999999999999998876531 2444 4454
No 331
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=74.60 E-value=1.8 Score=40.29 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=55.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc---eEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~---~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (218)
.||.|+|+|-||+.+++.+.+++++ +++.+ |+......+ . +- .| ++.. ...++...+.
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~~---~--~~-~g------~~~~---~~~Vdadnv~--- 74 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVDV---A--QQ-YG------VSFK---LQQITPQNYL--- 74 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCCH---H--HH-HT------CEEE---ECCCCTTTHH---
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhhH---H--hh-cC------Ccee---EEeccchhHH---
Confidence 6899999999999999999887766 45543 542111111 0 00 01 0000 0001100000
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
...+.+ -++ + |+||.++..+.+.......+++|+ -.|+..
T Consensus 75 -~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 75 -EVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp -HHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred -HHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 001111 122 3 999999888888888889999999 556654
No 332
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=74.26 E-value=6.9 Score=33.29 Aligned_cols=93 Identities=15% Similarity=0.152 Sum_probs=48.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|.|.|.+|...++.+.... .+.+.+.+. +.+.+.++.+ +|.-. .+...+. .. .+.
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~--~~~k~~~a~~----lGa~~--~i~~~~~-~~------~~~----- 220 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDI--SSEKLALAKS----FGAMQ--TFNSSEM-SA------PQM----- 220 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CSEEEEEES--CHHHHHHHHH----TTCSE--EEETTTS-CH------HHH-----
T ss_pred CEEEEECCCCcchHHHHHHHHcC-CcEEEEEec--hHHHHHHHHH----cCCeE--EEeCCCC-CH------HHH-----
Confidence 47899999999999888877664 444444444 3343333322 22100 0100000 00 000
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCC
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Ga 118 (218)
...+. +..++|+|+||+|.-.+.+.+-..++.|-
T Consensus 221 ~~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G 254 (346)
T 4a2c_A 221 QSVLR-ELRFNQLILETAGVPQTVELAVEIAGPHA 254 (346)
T ss_dssp HHHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTC
T ss_pred HHhhc-ccCCcccccccccccchhhhhhheecCCe
Confidence 00000 11378999999997666666655665555
No 333
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=74.25 E-value=3.6 Score=37.55 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=30.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
..+|.|-|||-+|+..++.+.+. +..+|+|.|..
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~~ 251 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERL-GMRVVAVATSM 251 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 36899999999999999988876 69999999973
No 334
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=74.18 E-value=2.9 Score=36.58 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 3799999999999999998887654433445565
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=74.15 E-value=7.9 Score=33.33 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=23.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCce-EEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~-vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +.+ |+++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAA-GACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEC
Confidence 4789999999999998888765 455 66553
No 336
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=74.11 E-value=3.2 Score=36.73 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=54.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
.||+|+|.|.+|+.+++.+.+. .+| .|.|. +.+....+.+ . . . .+.++ + .+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~--~~V-~V~~R--~~~~a~~la~--~-~-----~--------~~~~d-----~---~~ 67 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE--FDV-YIGDV--NNENLEKVKE--F-A-----T--------PLKVD-----A---SN 67 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEE-EEEES--CHHHHHHHTT--T-S-----E--------EEECC-----T---TC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC--CeE-EEEEC--CHHHHHHHHh--h-C-----C--------eEEEe-----c---CC
Confidence 6999999999999999998876 564 45554 4444322210 0 0 0 01010 0 01
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCC
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~p 126 (218)
++++.=.-.++|+|+.|++.....+-+...+++|+ .+++..
T Consensus 68 ~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp HHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred HHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 11100000268999999997766666667788887 566644
No 337
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=74.10 E-value=3.1 Score=36.66 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=27.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|.|.+|+.+++++.....++-|.|.|.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r 162 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT 162 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 589999999999999998865445777778776
No 338
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=74.08 E-value=3.1 Score=38.71 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|+|.||+.+++.+.... .+|+++ |+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~-d~ 305 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVT-EI 305 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 58999999999999999887764 676654 54
No 339
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=74.01 E-value=3.3 Score=35.90 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4799999999999998888877653333445565
No 340
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=73.78 E-value=4.4 Score=36.85 Aligned_cols=110 Identities=15% Similarity=0.200 Sum_probs=60.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCC-ceEEEEeCCCcChhhhhhhee-eccccccccCccEEEeCCc---eE--EE--CC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDK---TL--LF--GE 73 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~-~~vvaInd~~~~~~~~ayl~k-ydS~~G~~~~~~v~~~~~~---~l--~i--~g 73 (218)
.+|.|.| +|-||...++.+.+.|+ ++|+++..- .+.+.++...+ |.. .-+...+.. .| .+ .|
T Consensus 10 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q~~~f~p-------~~v~v~d~~~~~~L~~~l~~~~ 81 (406)
T 1q0q_A 10 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQCLEFSP-------RYAVMDDEASAKLLKTMLQQQG 81 (406)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHHHHHHCC-------SEEEESSHHHHHHHHHHHHHTT
T ss_pred eeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHHHHHhCC-------CEEEEcCHHHHHHHHHHhhcCC
Confidence 6999999 99999999999987764 999999874 36655543321 211 111111100 00 01 12
Q ss_pred EEEEEEeecC-CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE
Q 027805 74 KPVTVFGVRN-PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 74 ~~i~v~~~~~-p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii 123 (218)
..++++...+ ..++- ....+|+|+-+.-.+....-.-..+++| |++.+
T Consensus 82 ~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaL 130 (406)
T 1q0q_A 82 SRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTILL 130 (406)
T ss_dssp CCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEEE
T ss_pred CCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CeEEE
Confidence 2234433221 11110 0125899999887777766444556666 35544
No 341
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=73.75 E-value=2.9 Score=35.19 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.||+|+|+|.+|+.+++.+.+.+ .+|+ +.+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~-v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVF-LWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEE-EEEC
Confidence 58999999999999999998764 5554 4454
No 342
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=73.74 E-value=8.9 Score=33.02 Aligned_cols=136 Identities=12% Similarity=0.090 Sum_probs=67.9
Q ss_pred cEEEEEccChhHHHH-HHHH-HcCCCce-EEEEeCCCcC-hhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEE
Q 027805 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (218)
Q Consensus 4 ~kvgInG~GrIGr~~-~r~~-~~~~~~~-vvaInd~~~~-~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (218)
-+|.|+|.|.+|... ++.+ ... +.+ |+++.... + ...+.++.+ .|. ..+ +-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~-~~~~~~~~~~~----lGa---~~v----------~~------ 228 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRD-RPDPTIDIIEE----LDA---TYV----------DS------ 228 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCC-SSCHHHHHHHH----TTC---EEE----------ET------
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCc-ccHHHHHHHHH----cCC---ccc----------CC------
Confidence 589999999999998 8877 544 566 77775431 1 002322211 221 001 00
Q ss_pred eecCCCCC-CccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccc-----cCCCCCEEEcCC
Q 027805 80 GVRNPEEI-PWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-----YKPELNIVSNAS 153 (218)
Q Consensus 80 ~~~~p~~i-~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~-----~~~~~~IIs~aS 153 (218)
.+.+..++ .+.. ++|+||||+|...+.+.+-..++.|- +++.-+.....+ ..++... +.++..++..-.
T Consensus 229 ~~~~~~~i~~~~g-g~Dvvid~~g~~~~~~~~~~~l~~~G-~iv~~g~~~~~~---~~~~~~~~~~~~~~~~~~i~g~~~ 303 (357)
T 2b5w_A 229 RQTPVEDVPDVYE-QMDFIYEATGFPKHAIQSVQALAPNG-VGALLGVPSDWA---FEVDAGAFHREMVLHNKALVGSVN 303 (357)
T ss_dssp TTSCGGGHHHHSC-CEEEEEECSCCHHHHHHHHHHEEEEE-EEEECCCCCCCC---CCCCHHHHHHHHHHTTCEEEECCC
T ss_pred CccCHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCC-EEEEEeCCCCCC---ceecHHHHhHHHHhCCeEEEEecc
Confidence 00011000 0112 79999999997544555556665544 233333222111 1122222 223344554333
Q ss_pred hhhhhHHHHHHHHHhh
Q 027805 154 CTTNCLAPLAKVIHDK 169 (218)
Q Consensus 154 CtT~~Lap~lk~L~~~ 169 (218)
.+...+.-+++.+.+.
T Consensus 304 ~~~~~~~~~~~l~~~g 319 (357)
T 2b5w_A 304 SHVEHFEAATVTFTKL 319 (357)
T ss_dssp CCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhC
Confidence 3456677777777654
No 343
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=73.69 E-value=3.1 Score=35.17 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=27.8
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCC-CceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~-~~~vvaInd 35 (218)
++||-|.| .|.||+.+++.+++.+ .++++++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 47999999 7999999999998763 588888864
No 344
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=73.66 E-value=3.4 Score=34.25 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=27.3
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|.| .|.||+.+++.+.+.++.+|+++.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 46899999 7999999999998765478887753
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=73.51 E-value=4.4 Score=34.58 Aligned_cols=31 Identities=13% Similarity=0.250 Sum_probs=25.3
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|.| .|.||...++.+... +.+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK-GAHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4789999 899999999888766 468887764
No 346
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=73.22 E-value=3.4 Score=35.97 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
|||+|+|.|.+|..++..+...+-+.-+.+.|..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 4899999999999999988776544344555653
No 347
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=73.19 E-value=3.9 Score=37.70 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..||||+|.|.+|..++..+.+. +++|+.. |.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~-D~ 85 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLV-VR 85 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEE-EC
Confidence 36999999999999999998876 5776655 54
No 348
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=73.07 E-value=3.9 Score=35.02 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=70.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+... +.+++++.- +.+.+.++-+ .|. + .+++- ...+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~---~~~~~~~~~~----lGa----~--------~~i~~------~~~~ 221 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM-GLRVAAVDI---DDAKLNLARR----LGA----E--------VAVNA------RDTD 221 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCEEEEEES---CHHHHHHHHH----TTC----S--------EEEET------TTSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEeC---CHHHHHHHHH----cCC----C--------EEEeC------CCcC
Confidence 4789999999999998888766 468888753 3344433321 221 1 11110 0000
Q ss_pred C-CCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEEcCChhhhhHHHH
Q 027805 84 P-EEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p-~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~~~~~~~IIs~aSCtT~~Lap~ 162 (218)
. +.+.-...++|+|||++|.....+.+-..++.|- ++++-+.... + +-...+ ..+.++..+......+...+.-+
T Consensus 222 ~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~-~-~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~ 297 (340)
T 3s2e_A 222 PAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGG-TIALNGLPPG-D-FGTPIF-DVVLKGITIRGSIVGTRSDLQES 297 (340)
T ss_dssp HHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCSS-E-EEEEHH-HHHHTTCEEEECCSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCC-EEEEeCCCCC-C-CCCCHH-HHHhCCeEEEEEecCCHHHHHHH
Confidence 0 0000001278999999997656666666666554 2333332221 1 111111 12223345555555556677777
Q ss_pred HHHHHhh
Q 027805 163 AKVIHDK 169 (218)
Q Consensus 163 lk~L~~~ 169 (218)
++.+.+.
T Consensus 298 ~~l~~~g 304 (340)
T 3s2e_A 298 LDFAAHG 304 (340)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 7777653
No 349
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.00 E-value=3.3 Score=36.22 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=65.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+... +.+++++.. +.+.+.++.+ .|. + .+++-.. +..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~---~~~~~~~a~~----lGa----~--------~vi~~~~-----~~~ 250 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT---SEAKREAAKA----LGA----D--------EVVNSRN-----ADE 250 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES---SGGGHHHHHH----HTC----S--------EEEETTC-----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC---CHHHHHHHHH----cCC----c--------EEecccc-----HHH
Confidence 4789999999999998887665 467776653 2233323321 221 0 1111000 000
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCccc-cCCCCCEEEcCChhhhhHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~~-~~~~~~IIs~aSCtT~~Lap~ 162 (218)
.+++. .++|+||||+|.-...+.+-..++.|- +++.-+.... +. ..++... +.++..+...-..+...+..+
T Consensus 251 ~~~~~---~g~Dvvid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~-~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 323 (369)
T 1uuf_A 251 MAAHL---KSFDFILNTVAAPHNLDDFTTLLKRDG-TMTLVGAPAT-PH--KSPEVFNLIMKRRAIAGSMIGGIPETQEM 323 (369)
T ss_dssp HHTTT---TCEEEEEECCSSCCCHHHHHTTEEEEE-EEEECCCC----------CHHHHHTTTCEEEECCSCCHHHHHHH
T ss_pred HHHhh---cCCCEEEECCCCHHHHHHHHHHhccCC-EEEEeccCCC-Cc--cccCHHHHHhCCcEEEEeecCCHHHHHHH
Confidence 11121 389999999997656665555555443 2333232211 11 1223221 222334444333334556667
Q ss_pred HHHHHhh
Q 027805 163 AKVIHDK 169 (218)
Q Consensus 163 lk~L~~~ 169 (218)
++.+.+.
T Consensus 324 ~~l~~~g 330 (369)
T 1uuf_A 324 LDFCAEH 330 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 7766543
No 350
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=72.99 E-value=3.9 Score=36.19 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|+|+||+.+++.+...+ .+|++. |.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~-d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVL-DI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEE-eC
Confidence 58999999999999999888764 576654 44
No 351
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=72.94 E-value=2.6 Score=34.61 Aligned_cols=31 Identities=16% Similarity=0.409 Sum_probs=26.6
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++||-|.| .|.||+.+++.+.+. +.+|+++.
T Consensus 5 ~m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~ 36 (287)
T 3sc6_A 5 KERVIITGANGQLGKQLQEELNPE-EYDIYPFD 36 (287)
T ss_dssp CEEEEEESTTSHHHHHHHHHSCTT-TEEEEEEC
T ss_pred eeEEEEECCCCHHHHHHHHHHHhC-CCEEEEec
Confidence 36999999 899999999998876 57888885
No 352
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=72.86 E-value=3.6 Score=31.31 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=25.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+..|.|+|.|..|-..+..|.+. +++++.+-
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~E 32 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFD 32 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 47899999999999888887766 47766553
No 353
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=72.82 E-value=3.4 Score=34.81 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=27.1
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCC-CceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRD-DVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~-~~~vvaInd 35 (218)
|++|-|.| .|.||+.+++.+++.. +.+|+++.-
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 36999999 8999999999998763 578887753
No 354
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=72.80 E-value=3.7 Score=33.97 Aligned_cols=32 Identities=34% Similarity=0.511 Sum_probs=27.1
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++||-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 57999999 7999999999998874 67777754
No 355
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=72.65 E-value=2.2 Score=37.02 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=24.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC-CcChhhhhh
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP-FITTDYMTY 45 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~-~~~~~~~ay 45 (218)
.||.|+|.|-+|..+++.+.... +.-+.|.|. ..+.+.+..
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aG-VG~i~lvD~D~Ve~sNL~R 78 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCG-IGKLLLFDYDKVELANMNR 78 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEECCCBC-------
T ss_pred CeEEEECcCHHHHHHHHHHHHcC-CCEEEEECCCccChhhccc
Confidence 69999999999999999987653 433444454 224444444
No 356
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=72.55 E-value=4.2 Score=36.90 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=33.3
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCC-ceEEEEeCCCcChhhhhh
Q 027805 4 VKIGING-FGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTY 45 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~-~~vvaInd~~~~~~~~ay 45 (218)
.||.|.| +|-||...++.+.+.|+ ++|+++..-..+.+.++.
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~ 65 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLR 65 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHH
Confidence 5899999 99999999999987764 999999872235555543
No 357
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=72.47 E-value=3.1 Score=34.07 Aligned_cols=26 Identities=19% Similarity=0.489 Sum_probs=22.9
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~ 26 (218)
|+++||-|.| .|.||+.+++.+.+.+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 5568999999 8999999999998765
No 358
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=72.40 E-value=3.2 Score=36.25 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=23.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA-GASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEc
Confidence 4789999999999988887655 35 677764
No 359
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=72.37 E-value=3.8 Score=38.03 Aligned_cols=43 Identities=16% Similarity=0.198 Sum_probs=32.6
Q ss_pred CccEEEEEc-cChhHHHHHHHHHc---CC-CceEEEEeCCCcChhhhhh
Q 027805 2 GKVKIGING-FGRIGRLVARVILQ---RD-DVELVAVNDPFITTDYMTY 45 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~---~~-~~~vvaInd~~~~~~~~ay 45 (218)
+|.||.|.| +|-||...++.+.+ .| .++|+|+..- .+.+.++.
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg-~Nv~lL~e 123 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN-KSVNELYE 123 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES-SCHHHHHH
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC-CCHHHHHH
Confidence 346899999 99999999988876 33 5999999874 35555443
No 360
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=72.30 E-value=3.7 Score=36.27 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=25.6
Q ss_pred CCccEEEEEcc-ChhHHHHHHHHHcCCCc-eEEEEeCC
Q 027805 1 MGKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~-GrIGr~~~r~~~~~~~~-~vvaInd~ 36 (218)
|..+||+|+|. |.+|..++..++..+-. +| .+.|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~ev-vLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNL-CLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCE-EEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEE-EEEeC
Confidence 44579999997 99999999888766432 44 44555
No 361
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=71.76 E-value=3.5 Score=35.07 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=24.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|.| .|.||...++.+... +.+++++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKAL-GAKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4789999 899999998887765 468887754
No 362
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=71.70 E-value=3.6 Score=38.64 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcC-----CCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~-----~~~~vvaInd 35 (218)
.||||+|+|.+|..+++++.+. .+++++.-.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 5999999999999999999875 2466654444
No 363
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=71.50 E-value=4.2 Score=34.92 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=25.8
Q ss_pred CC-ccEEEEEc-cChhHHHHHHHHHcCCCc------eEEEE
Q 027805 1 MG-KVKIGING-FGRIGRLVARVILQRDDV------ELVAV 33 (218)
Q Consensus 1 m~-~~kvgInG-~GrIGr~~~r~~~~~~~~------~vvaI 33 (218)
|+ ++||.|.| .|.||+.+++.+...+.+ +|+.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~ 41 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLL 41 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEE
Confidence 53 47999999 599999999998876533 66665
No 364
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=71.38 E-value=2.4 Score=38.79 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=54.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECC--EEEEEEee
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE--KPVTVFGV 81 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g--~~i~v~~~ 81 (218)
.+|-|.|-|+||..+++.+.+ +.++.-|-. +.+...+|. ..++ + .++++| ....++.+
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~---d~~r~~~la------~~l~--------~-~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ--TYSVKLIER---NLQRAEKLS------EELE--------N-TIVFCGDAADQELLTE 295 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEES---CHHHHHHHH------HHCT--------T-SEEEESCTTCHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhh--cCceEEEec---CHHHHHHHH------HHCC--------C-ceEEeccccchhhHhh
Confidence 589999999999999998754 366666643 333332221 0111 2 344544 23334333
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHh-HHHHHhCCCCEEEEe
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDK-AAAHLKGGAKKVIIS 124 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~-a~~h~~~GakkViis 124 (218)
. .+. ..|+++-.|+.-.+.-. +-...+.|++|+|.-
T Consensus 296 e---~i~----~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 296 E---NID----QVDVFIALTNEDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp T---TGG----GCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred c---Cch----hhcEEEEcccCcHHHHHHHHHHHHcCCcccccc
Confidence 2 222 67999999996433322 223335799997653
No 365
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=71.20 E-value=4 Score=37.44 Aligned_cols=31 Identities=13% Similarity=0.347 Sum_probs=25.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+||+|+|+|.+|..++..+.+. +.+|+.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEE
Confidence 37999999999999999888876 46776663
No 366
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=70.99 E-value=4.3 Score=35.18 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=27.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+++|+|.|.+|+.+++++.....++-|.|.|..
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~ 155 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY 155 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc
Confidence 5899999999999999998764337777777765
No 367
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=70.96 E-value=7.9 Score=33.43 Aligned_cols=86 Identities=21% Similarity=0.159 Sum_probs=51.6
Q ss_pred cEEEEE-cc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEee
Q 027805 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (218)
Q Consensus 4 ~kvgIn-G~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (218)
.+++|+ |+ |+.|+.+++.+.+. +++++...+|... + . . +.|. +++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~-G~~~v~~VnP~~~-------------------g------~-~--i~G~--~vy~- 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY-GTNLVGGTTPGKG-------------------G------K-T--HLGL--PVFN- 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT-------------------T------C-E--ETTE--EEES-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC-CCcEEEEeCCCcC-------------------c------c-e--ECCe--eeec-
Confidence 467888 96 99999999988775 4776644445200 0 0 0 2221 2221
Q ss_pred cCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE
Q 027805 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 82 ~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii 123 (218)
+.++++ .+..+|+++-+++.....+-+...+++|+|.+++
T Consensus 62 -sl~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 -TVKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SHHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -hHHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 122222 1125788888888776667777777888887433
No 368
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=70.77 E-value=3.5 Score=35.37 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=32.1
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhhe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~ 47 (218)
|||-|.| .|.||+.+++.+.+.+.++++.+.- ..+.+.+..++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~ 44 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESAL 44 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHh
Confidence 3899999 9999999999999886568777643 12566555554
No 369
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=70.57 E-value=3.9 Score=35.48 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=26.2
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988888776554544556676
No 370
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=70.54 E-value=5.5 Score=34.59 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=25.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..||+|+|.|.+|..++..+...+ +.-+.+.|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVVLVDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEEEec
Confidence 369999999999999998887764 423445555
No 371
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=70.50 E-value=16 Score=31.33 Aligned_cols=86 Identities=17% Similarity=0.050 Sum_probs=50.2
Q ss_pred cEEEEEccChhHHH-HHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~GrIGr~-~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
.||.++|.|.+|.. +++.+.++ +.+|. ++|....++....|- +.| + ++....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~-G~~V~-~~D~~~~~~~~~~L~----------------~~g--i-------~v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEA-GFEVS-GCDAKMYPPMSTQLE----------------ALG--I-------DVYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHT-TCEEE-EEESSCCTTHHHHHH----------------HTT--C-------EEEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhC-CCEEE-EEcCCCCcHHHHHHH----------------hCC--C-------EEECCC
Confidence 58999999999996 77777676 46655 455432222221110 011 1 122224
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Ga 118 (218)
+++++.. .++|+||=+.|.-.+.+......+.|.
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 4555431 257999999997666655555666777
No 372
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=70.35 E-value=5 Score=34.92 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
+||+|+|.|.+|..++..+...+.++ |.+.|..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEECC
Confidence 69999999999999988887654346 6666763
No 373
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=70.29 E-value=8.4 Score=32.61 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=24.6
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 5 kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+|.|.|. |.+|...++.+... +.+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECC
Confidence 6999995 99999999887765 4677777653
No 374
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=70.05 E-value=4.1 Score=34.03 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=25.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|.|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 4899999 8999999999999874 67777653
No 375
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=69.86 E-value=3.5 Score=35.78 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVC-GASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEC
Confidence 4799999999999988877655 35 566664
No 376
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=69.70 E-value=2.5 Score=36.70 Aligned_cols=31 Identities=16% Similarity=0.405 Sum_probs=24.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|+|.|.+|...++.+... +.+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM-GHHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEeC
Confidence 3789999999999998877655 467777654
No 377
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=69.66 E-value=4.8 Score=34.68 Aligned_cols=32 Identities=41% Similarity=0.622 Sum_probs=23.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaInd~ 36 (218)
+||+|+|.|.+|..++..+...+.. +|+ +.|.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~-l~D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMV-LIDV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEeC
Confidence 3899999999999998888765422 544 4454
No 378
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=69.55 E-value=5.5 Score=33.64 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=27.0
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|.| .|.||+.+++.+++. +.+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMD-GHEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHC-CCEEEEEeC
Confidence 47999999 799999999999886 478887754
No 379
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=69.38 E-value=3.3 Score=34.23 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=27.3
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcC-CCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~-~~~~vvaInd 35 (218)
|+ +||-|.| .|.||+.+++.+++. ++.+|+++.-
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 53 6899999 799999999999876 4567777653
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=69.35 E-value=6.5 Score=35.28 Aligned_cols=39 Identities=15% Similarity=0.194 Sum_probs=28.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl 46 (218)
-+|.|.|. |.+|...++.+... +.+++++.. +.+.+.++
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~---~~~~~~~~ 269 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG-GANPICVVS---SPQKAEIC 269 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCeEEEEEC---CHHHHHHH
Confidence 47999996 99999998888766 578887764 34444444
No 381
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=69.33 E-value=4.8 Score=36.09 Aligned_cols=31 Identities=16% Similarity=0.069 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+|+|+|+|.||+..++.+...+ .+|+ +.|.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~-v~D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVR-AFDT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 58999999999999999887765 6644 5565
No 382
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=69.31 E-value=14 Score=31.60 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=23.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +.+|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEc
Confidence 4789999999999998877665 46766654
No 383
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=69.14 E-value=3.9 Score=36.49 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=29.2
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
||+.||.|.|-|.+|+.+++++.+. +++++++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEE
Confidence 6678999999999999999999877 68999885
No 384
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=69.13 E-value=4.4 Score=35.73 Aligned_cols=113 Identities=20% Similarity=0.175 Sum_probs=55.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC-CcChhhhhhheee-ccccccccCccEEEeCCceE-EEC-CEEEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP-FITTDYMTYMFKY-DSVHGQWKHHELKVKDDKTL-LFG-EKPVTVF 79 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~-~~~~~~~ayl~ky-dS~~G~~~~~~v~~~~~~~l-~i~-g~~i~v~ 79 (218)
.||.|+|.|.+|..+++.+.... +.-+.|.|. ..+.+.+..-+-| .+.-|+.. .++- . . .| .+| ...++..
T Consensus 119 ~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~K-a~~~-~-~-~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSG-IGEIILIDNDQIENTNLTRQVLFSEDDVGKNK-TEVI-K-R-ELLKRNSEISVSEI 193 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBH-HHHH-H-H-HHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcCcccccccccCCChHHCCChH-HHHH-H-H-HHHHHCCCCeEEEe
Confidence 58999999999999999988653 433334343 2244444332212 11124322 1100 0 0 00 112 1123322
Q ss_pred eec-CCCC-CC-ccCCCccEEEeeCCccc-CHHhH-HHHHhCCCCEEEEeC
Q 027805 80 GVR-NPEE-IP-WAETGAEYVVESTGVFT-DKDKA-AAHLKGGAKKVIISA 125 (218)
Q Consensus 80 ~~~-~p~~-i~-W~~~gvDiVve~tg~f~-~~~~a-~~h~~~GakkViis~ 125 (218)
.+. +..+ +. + .+.|+||+|+..+. ++... ....+.|.+ +|++
T Consensus 194 ~~~i~~~~~~~~~--~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p--~i~~ 240 (353)
T 3h5n_A 194 ALNINDYTDLHKV--PEADIWVVSADHPFNLINWVNKYCVRANQP--YINA 240 (353)
T ss_dssp ECCCCSGGGGGGS--CCCSEEEECCCCSTTHHHHHHHHHHHTTCC--EEEE
T ss_pred ecccCchhhhhHh--ccCCEEEEecCChHHHHHHHHHHHHHhCCC--EEEE
Confidence 221 1111 11 2 37899999999887 55432 234456653 4444
No 385
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=69.01 E-value=6.1 Score=34.66 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=26.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|.|.+|..++..++..+-..-+.+.|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 4799999999999999888887754444556665
No 386
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=68.87 E-value=4.2 Score=36.29 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
.+|+|+|+|.||+.+++.+... ++ +|++++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~ 198 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR-GVRAVLVAN 198 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH-CCSEEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHC-CCCEEEEEe
Confidence 5899999999999999998765 46 666554
No 387
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.77 E-value=7.4 Score=33.28 Aligned_cols=30 Identities=23% Similarity=0.419 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|.|.|.|.||...++.+.... .+++++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 47999999999999999887664 6877765
No 388
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=68.62 E-value=6 Score=33.06 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=26.7
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+++.++.+|+++.-
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 789999 7999999999999875678888754
No 389
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=68.60 E-value=5.4 Score=34.13 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
++||+|+|.|.+|..++..+.+.. .+|+.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999887763 566666
No 390
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=68.42 E-value=4.1 Score=35.39 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=23.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.||...++.+... +. +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA-GASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEC
Confidence 4799999999999988877655 35 666664
No 391
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.29 E-value=2.8 Score=33.88 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=23.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
.+|.|.|+|++|+.+++.+.+.. . +++|
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g-~-v~vi 37 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSE-V-FVLA 37 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSE-E-EEEE
T ss_pred CEEEEECCChHHHHHHHHHHhCC-e-EEEE
Confidence 58999999999999999887653 5 6655
No 392
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=68.24 E-value=5.3 Score=34.08 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=27.5
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcC-CCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~-~~~~vvaInd 35 (218)
.++|-|-| .|.||+.+++.+++. .+.+|+++.-
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 36999998 899999999999883 3688888764
No 393
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=68.10 E-value=5.1 Score=35.08 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.7
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3799999999999999998887654544555665
No 394
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=67.98 E-value=4.2 Score=36.63 Aligned_cols=31 Identities=13% Similarity=0.018 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.||+|+|+|++|+..++.+... +.+|+ +.|.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~-v~D~ 215 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-GAKTT-GYDV 215 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEE-EEeC
Confidence 5999999999999999988766 36655 5565
No 395
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=67.86 E-value=8.1 Score=33.73 Aligned_cols=140 Identities=11% Similarity=0.137 Sum_probs=70.4
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCE---EEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK---PVTVFG 80 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~---~i~v~~ 80 (218)
-+|.|+|.|.+|...++.+....-.+|+++.- +.+.+.++.+ +|. + .+++-+ .-.+.+
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~----lGa----~--------~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEE----IGA----D--------LTLNRRETSVEERRK 257 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHH----TTC----S--------EEEETTTSCHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHH----cCC----c--------EEEeccccCcchHHH
Confidence 47999999999999998877663247887763 2344433321 221 0 011100 000000
Q ss_pred ecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCcc--ccCCCCCEEEcCChhhhh
Q 027805 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN--EYKPELNIVSNASCTTNC 158 (218)
Q Consensus 81 ~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~--~~~~~~~IIs~aSCtT~~ 158 (218)
...++. ...++|+||||+|.....+.+-..++.|-+-|++..++...+. .++.. .+.++..++..-..+...
T Consensus 258 --~v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~ 331 (380)
T 1vj0_A 258 --AIMDIT-HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSH 331 (380)
T ss_dssp --HHHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHHH
T ss_pred --HHHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHHH
Confidence 000000 1137999999999655555565666555422333222212121 22322 233344555543434566
Q ss_pred HHHHHHHHHh
Q 027805 159 LAPLAKVIHD 168 (218)
Q Consensus 159 Lap~lk~L~~ 168 (218)
+.-+++.+.+
T Consensus 332 ~~~~~~l~~~ 341 (380)
T 1vj0_A 332 FVKTVSITSR 341 (380)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 7777787766
No 396
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=67.66 E-value=17 Score=30.97 Aligned_cols=148 Identities=11% Similarity=0.153 Sum_probs=72.3
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
.+|.|.|. |.+|+..++.+.... .+++++.. +.+.+..+.+ .|. . ..+...+. .+ . +.
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~---~~~~~~~~~~----~ga-~-~~~d~~~~-~~------~---~~- 226 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG---SEDKLRRAKA----LGA-D-ETVNYTHP-DW------P---KE- 226 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHH----HTC-S-EEEETTST-TH------H---HH-
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHh----cCC-C-EEEcCCcc-cH------H---HH-
Confidence 47899996 999999999887664 68777653 3333333311 121 0 00000000 00 0 00
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeC-CCCCCCeEEeecCccc-cCCCCCEEEcCChhhhhHH
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA-PSKDAPMFVVGVNENE-YKPELNIVSNASCTTNCLA 160 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~-ps~d~p~~V~gvN~~~-~~~~~~IIs~aSCtT~~La 160 (218)
..++. ...++|+|||++| ....+.+-..++.|- +++.-+ ++...+ .++... +.++..++..-..+...+.
T Consensus 227 -~~~~~-~~~~~d~vi~~~g-~~~~~~~~~~l~~~G-~~v~~g~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~ 298 (343)
T 2eih_A 227 -VRRLT-GGKGADKVVDHTG-ALYFEGVIKATANGG-RIAIAGASSGYEG----TLPFAHVFYRQLSILGSTMASKSRLF 298 (343)
T ss_dssp -HHHHT-TTTCEEEEEESSC-SSSHHHHHHHEEEEE-EEEESSCCCSCCC----CCCTTHHHHTTCEEEECCSCCGGGHH
T ss_pred -HHHHh-CCCCceEEEECCC-HHHHHHHHHhhccCC-EEEEEecCCCCcC----ccCHHHHHhCCcEEEEecCccHHHHH
Confidence 00000 1137999999999 556666666665544 333333 222211 122222 2223445543333456677
Q ss_pred HHHHHHHhhcCeeEEEEEEEec
Q 027805 161 PLAKVIHDKFGIVEGLMTTVHS 182 (218)
Q Consensus 161 p~lk~L~~~fgI~~~~~Ttvha 182 (218)
-+++.+.+. .++ ..++....
T Consensus 299 ~~~~l~~~g-~l~-~~i~~~~~ 318 (343)
T 2eih_A 299 PILRFVEEG-KLK-PVVGQVLP 318 (343)
T ss_dssp HHHHHHHHT-SSC-CCEEEEEE
T ss_pred HHHHHHHcC-CCC-CceeEEee
Confidence 777777654 343 23443433
No 397
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=67.49 E-value=6.5 Score=32.77 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.1
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+||-|.| .|.||+.+++.+.+.. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 8999999999998874 78887753
No 398
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=67.45 E-value=5.4 Score=33.79 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|.| .|.||+.+++.+++. +.+|+++.-
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL-DQKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 46899999 799999999999887 468877753
No 399
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=67.21 E-value=7 Score=33.87 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=23.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAA-GAARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEc
Confidence 4799999999999998887766 45 677664
No 400
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=67.16 E-value=25 Score=31.95 Aligned_cols=83 Identities=17% Similarity=0.188 Sum_probs=51.9
Q ss_pred ccEEEEEccC----hhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEE
Q 027805 3 KVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (218)
Q Consensus 3 ~~kvgInG~G----rIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v 78 (218)
..+|+|+|.+ ++|+.+++.+.+.+...|..||-- ++. +.|. ++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~-------------------i~G~--~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEE-------------------VQGV--KA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSE-------------------ETTE--EC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCe-------------------ECCE--ec
Confidence 4689999976 889999999977644666666521 011 1121 11
Q ss_pred EeecCCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEE
Q 027805 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (218)
Q Consensus 79 ~~~~~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkVii 123 (218)
+ .+.++++ ..+|+++=+++.....+-.....+.|+|.+++
T Consensus 55 y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 2234444 25788877877766666666667778877554
No 401
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=67.16 E-value=5.7 Score=35.12 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=25.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.+|+|+|+|++|+..++.+...+ .+ |.+.|..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~-V~~~d~~ 204 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AV-VMATDVR 204 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CE-EEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CE-EEEEeCC
Confidence 58999999999999999887764 66 4455653
No 402
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=66.60 E-value=5.1 Score=31.89 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=25.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCc-eEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDV-ELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~-~vvaInd 35 (218)
++|-|.| .|.||+.+++.+.+.+.+ +|+++.-
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 5899999 899999999999887532 7776643
No 403
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=66.47 E-value=5.1 Score=33.45 Aligned_cols=31 Identities=29% Similarity=0.301 Sum_probs=25.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|.|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 6899999 8999999999999874 67776653
No 404
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=66.33 E-value=7 Score=32.39 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=25.7
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++|-|.| .|.||+.+++.+.+.+ .+|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 6899999 7999999999998864 7777764
No 405
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=66.17 E-value=6.8 Score=32.67 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=26.8
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|+.++|-|.| .|.||+.+++.+.+. +.+|+++.-
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~-G~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEK-GYEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-CCEEEEEEC
Confidence 5457899999 799999999999886 478877753
No 406
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=66.00 E-value=7.5 Score=32.47 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.4
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|||-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 8999999999998874 78887754
No 407
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=65.60 E-value=6.2 Score=34.15 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=20.8
Q ss_pred ccEEEEEcc-ChhHHHHHHHHHcCC
Q 027805 3 KVKIGINGF-GRIGRLVARVILQRD 26 (218)
Q Consensus 3 ~~kvgInG~-GrIGr~~~r~~~~~~ 26 (218)
++||.|.|. |.||..++..+...+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~ 29 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGD 29 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC
Confidence 489999996 999999998887765
No 408
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=65.59 E-value=6.2 Score=34.35 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.1
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999988887776654444555665
No 409
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=65.40 E-value=9.8 Score=32.95 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=23.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~ 227 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA-GASRIIAID 227 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEc
Confidence 4799999999999998887765 45 677663
No 410
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=65.27 E-value=7.3 Score=33.28 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|.|.+|..++..+...+.+.-+.+.|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 389999999999999988877653333445565
No 411
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=64.85 E-value=6.8 Score=33.68 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|||+|+|.|.+|..++..+...+.+.-+.+-|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 489999999999999888876654433445565
No 412
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=64.75 E-value=7.4 Score=32.52 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=25.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
++|-|-| .|.||+.+++.+++. +.+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQ-GIDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhC-CCEEEEEe
Confidence 4899999 899999999999886 47888774
No 413
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=64.33 E-value=6.9 Score=35.49 Aligned_cols=32 Identities=19% Similarity=0.089 Sum_probs=25.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~ 37 (218)
.||+|+|+|++|...++.+.... .+|+ +.|..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~~ 222 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVS-ATDVR 222 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEE-EEcCC
Confidence 69999999999999999888764 6654 66763
No 414
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=64.23 E-value=7.9 Score=33.21 Aligned_cols=90 Identities=12% Similarity=0.177 Sum_probs=50.2
Q ss_pred cEEEEE-ccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeec
Q 027805 4 VKIGIN-GFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (218)
Q Consensus 4 ~kvgIn-G~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (218)
-+|.|+ |.|.||...++.+... +.+++++.. +.+.+.++.+ .|. + .+++-+. .+ . .
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~---~~~~~~~~~~----lGa----~--------~vi~~~~-~~-~-~ 208 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAY-GLRVITTAS---RNETIEWTKK----MGA----D--------IVLNHKE-SL-L-N 208 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEECC---SHHHHHHHHH----HTC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHh----cCC----c--------EEEECCc-cH-H-H
Confidence 478999 5999999999888766 468888754 3444444422 221 1 1111100 00 0 0
Q ss_pred CCCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCC
Q 027805 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA 118 (218)
Q Consensus 83 ~p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~Ga 118 (218)
...++ ...++|+||||+|.-...+.+-..++.|-
T Consensus 209 ~~~~~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 209 QFKTQ--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp HHHHH--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred HHHHh--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 00111 12379999999997555455555665554
No 415
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=63.95 E-value=7.9 Score=33.92 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=24.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|+|+|.|.||+.+++.+.... .+|+++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 68999999999999999888764 5766553
No 416
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=63.77 E-value=8.1 Score=33.06 Aligned_cols=32 Identities=31% Similarity=0.452 Sum_probs=24.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCC-CceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~-~~~vvaInd~ 36 (218)
+||+|+|.|.+|..++..+...+ ..+|+.+ |.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~-D~ 33 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL-DV 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 38999999999999988887653 4555544 44
No 417
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=63.65 E-value=5.1 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=24.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +++++.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~ 203 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTD 203 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEC
Confidence 4799999999999998887765 45 777765
No 418
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=63.49 E-value=7.7 Score=32.55 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=26.8
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+ ++|-|.| .|.||+.+++.+++. +.+|+++.
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~ 33 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEA-GYLPVVID 33 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 54 6999999 899999999999886 46777774
No 419
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=63.41 E-value=6.9 Score=33.98 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=25.1
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|.| .|.||...++.+... +.+++++..
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~~ 216 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAW-DAHVTAVCS 216 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEeC
Confidence 4799999 899999998888766 468887763
No 420
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=63.20 E-value=8.1 Score=33.20 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=26.5
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|.| .|.||+.+++.+++.+..+|+++.-
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 6899999 8999999999998864278887743
No 421
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=62.88 E-value=8.8 Score=32.77 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=26.4
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 5899999 8999999999998864 78887754
No 422
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=62.49 E-value=7.3 Score=34.03 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
-||+|+|.|.+|+.++..+... +++|+ +.|+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~-l~D~ 37 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDI 37 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECS
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEE-EEEC
Confidence 5899999999999999887776 46654 5576
No 423
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=61.68 E-value=9.3 Score=34.14 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.||+|+|-|.+|+.+++++.+. +++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM-GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5999999999999999988776 58887773
No 424
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=61.43 E-value=8.4 Score=33.32 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=24.0
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCC-ceEEEE
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDD-VELVAV 33 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~-~~vvaI 33 (218)
++||+|+| .|.+|..++..+.+.+- -+|+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 47999999 89999999988877642 355543
No 425
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=61.30 E-value=14 Score=32.00 Aligned_cols=30 Identities=17% Similarity=0.287 Sum_probs=23.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSA-GAKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEc
Confidence 4799999999999998887766 45 677664
No 426
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=61.15 E-value=12 Score=32.34 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=23.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
-+|.|+|.|.+|...++.+... +. +|+++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA-GASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEc
Confidence 4799999999999998877655 35 677664
No 427
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=61.12 E-value=8.5 Score=33.37 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=23.7
Q ss_pred cEEEEEc-cChhHHHHHHHHHcC-CCceEEEEeCC
Q 027805 4 VKIGING-FGRIGRLVARVILQR-DDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~-~~~~vvaInd~ 36 (218)
+||+|+| .|.+|..++..+... +-..-+.+-|.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di 35 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI 35 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec
Confidence 4999999 999999998888754 43333344454
No 428
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=61.05 E-value=10 Score=31.95 Aligned_cols=32 Identities=31% Similarity=0.598 Sum_probs=26.7
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 36899999 8999999999998874 78887753
No 429
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=61.04 E-value=6 Score=32.62 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=25.3
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|.|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 7999999999998764 66666643
No 430
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=60.96 E-value=8.5 Score=35.07 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=26.0
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+||+|+|+|.+|..++..+.+. +.+|++.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D 38 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVD 38 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 47999999999999999988876 47777664
No 431
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=60.95 E-value=10 Score=30.28 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=28.6
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+.|+.|+|.|--|+.+++.+.+ .++++++.-|.
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~-~~~~~vgfiDd 44 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRA-CGETVAAIVDA 44 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHh-CCCEEEEEEeC
Confidence 3589999999999999998877 56899998885
No 432
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=60.26 E-value=8.3 Score=32.55 Aligned_cols=31 Identities=35% Similarity=0.513 Sum_probs=26.2
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|-| .|.||+.+++.+++.++.+|+++.-
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 799999 8999999999998864678887753
No 433
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=60.12 E-value=11 Score=32.37 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=26.8
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|.| .|.||+.+++.+++.. .+|+++.-
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 36899999 7999999999998874 78887754
No 434
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=60.08 E-value=11 Score=32.79 Aligned_cols=31 Identities=10% Similarity=0.027 Sum_probs=25.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|+|. |.+|...++.+... +.+++++.+
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS-GYIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 36899996 99999999888766 468888864
No 435
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=59.91 E-value=9.2 Score=32.51 Aligned_cols=142 Identities=16% Similarity=0.109 Sum_probs=72.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhheeeccccccccCccEEEeCCceEEECCEEEEEEeecC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl~kydS~~G~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (218)
-+|.|+|.|.+|...++.+......+|+++.- +.+.+..+.+ .|. + .+++-+.-...++
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~----~Ga----~--------~~i~~~~~~~~~~-- 223 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKK----IGA----D--------VTINSGDVNPVDE-- 223 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHH----TTC----S--------EEEEC-CCCHHHH--
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhh----cCC----e--------EEEeCCCCCHHHH--
Confidence 37899999999998888877666788888753 2333322211 121 0 1111000000000
Q ss_pred CCCCCccCCCccEEEeeCCcccCHHhHHHHHhCCCCEEEEeCCCCCCCeEEeecCcc-ccCCCCCEEEcCChhhhhHHHH
Q 027805 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEN-EYKPELNIVSNASCTTNCLAPL 162 (218)
Q Consensus 84 p~~i~W~~~gvDiVve~tg~f~~~~~a~~h~~~GakkViis~ps~d~p~~V~gvN~~-~~~~~~~IIs~aSCtT~~Lap~ 162 (218)
..++ -+..++|+++|++|.-.+.+.+-..++.|-+-+++..+.... .++.. .+.+...+...-..+..-+.-+
T Consensus 224 v~~~-t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~i~gs~~~~~~~~~~~ 297 (348)
T 4eez_A 224 IKKI-TGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEM-----TLSVPTVVFDGVEVAGSLVGTRLDLAEA 297 (348)
T ss_dssp HHHH-TTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEE-----EECHHHHHHSCCEEEECCSCCHHHHHHH
T ss_pred hhhh-cCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCC-----ccCHHHHHhCCeEEEEEecCCHHHHHHH
Confidence 0000 012489999999997666665555554444333332222211 11211 1222345555555555667777
Q ss_pred HHHHHhhcCee
Q 027805 163 AKVIHDKFGIV 173 (218)
Q Consensus 163 lk~L~~~fgI~ 173 (218)
++.+.+. .|+
T Consensus 298 ~~l~~~g-~i~ 307 (348)
T 4eez_A 298 FQFGAEG-KVK 307 (348)
T ss_dssp HHHHHTT-SCC
T ss_pred HHHHHcC-CCE
Confidence 7777653 454
No 436
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=59.91 E-value=8.6 Score=32.59 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=26.0
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|.| .|.||+.+++.+++.+..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 6899999 7999999999998874367777754
No 437
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=59.67 E-value=3.9 Score=33.32 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=25.9
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|| .+|-|.| .|.||+.+++.+.+. +.+|+++.
T Consensus 1 M~-~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~ 33 (267)
T 3ay3_A 1 ML-NRLLVTGAAGGVGSAIRPHLGTL-AHEVRLSD 33 (267)
T ss_dssp CE-EEEEEESTTSHHHHHHGGGGGGT-EEEEEECC
T ss_pred CC-ceEEEECCCCHHHHHHHHHHHhC-CCEEEEEe
Confidence 54 6899999 799999999998876 46777664
No 438
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=59.64 E-value=9.1 Score=32.36 Aligned_cols=32 Identities=9% Similarity=0.066 Sum_probs=26.8
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++|-|.| .|.||+.+++.+.+. +.+|+++.-
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-CCeEEEEeC
Confidence 36899999 899999999999886 468877754
No 439
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=59.20 E-value=7.7 Score=32.17 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=24.3
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|-| .|.||+.+++.+.+.. .++++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4899999 8999999999998875 6666654
No 440
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=59.18 E-value=13 Score=30.93 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=26.8
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++|-|-| .|.||+.+++.+++. +.+|+++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEH-GYKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeC
Confidence 36899999 799999999999887 468887754
No 441
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=58.87 E-value=6.3 Score=38.05 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=25.5
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
..||||+|.|.+|..++..+.+. +.+|+.. |.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~l~-D~ 345 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPILMK-DI 345 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEEEE-CS
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEEEE-EC
Confidence 35899999999999999998876 4676644 54
No 442
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=58.81 E-value=8.1 Score=30.52 Aligned_cols=35 Identities=20% Similarity=0.068 Sum_probs=24.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
|||.|+.|+|.|--||.++..+.... .++++.-|.
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~Dd 35 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLDD 35 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC-
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEeC
Confidence 34468999999999999999876543 777777663
No 443
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=58.57 E-value=8.6 Score=32.25 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=26.1
Q ss_pred CccEEEEEc-cChhHHHHHHHHHcCCC------ceEEEEe
Q 027805 2 GKVKIGING-FGRIGRLVARVILQRDD------VELVAVN 34 (218)
Q Consensus 2 ~~~kvgInG-~GrIGr~~~r~~~~~~~------~~vvaIn 34 (218)
+.++|-|-| .|.||+.+++.+++.+. .+|+++.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 346899999 89999999999987642 5666654
No 444
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=58.51 E-value=8.4 Score=35.30 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=28.4
Q ss_pred ccEEEEEccChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhh
Q 027805 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (218)
Q Consensus 3 ~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ay 45 (218)
|.+|+|+|+|.+|..++-.+.+. +.+|+++ |. +.+.+..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~-Di--d~~kV~~ 59 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY-DV--NPSIVER 59 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS--CHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE-EC--CHHHHHH
Confidence 36999999999998777766655 5788887 54 5554433
No 445
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=58.07 E-value=12 Score=32.03 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=23.9
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCc-eEEEEeCC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDV-ELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~-~vvaInd~ 36 (218)
+||.|.| .|.+|..++..++..+.. +++ +.|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~-L~Di 34 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVV-FVDI 34 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEE-EECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEE-EEcC
Confidence 4899999 999999999888766433 444 3454
No 446
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=57.81 E-value=12 Score=31.94 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=26.1
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 5899999 7999999999998874 68877753
No 447
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=57.66 E-value=11 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=28.5
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
++.||.|.|-|.++..+++++.+. +++++++..+
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~-G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKEL-GIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHH-TCEEEEEECS
T ss_pred CCCEEEEECCcHhHHHHHHHHHHC-CCEEEEEcCC
Confidence 357999999999999999998776 5899999653
No 448
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=57.50 E-value=12 Score=32.14 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=25.2
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|.|.+|..++..+...+-+.-+.+.|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 499999999999998888876654444555565
No 449
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=57.22 E-value=12 Score=31.84 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=23.9
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEE
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaI 33 (218)
|||.|+|.|..|-..+..|... +++++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEE
Confidence 6999999999999888877765 5776655
No 450
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=57.11 E-value=13 Score=31.82 Aligned_cols=30 Identities=20% Similarity=0.111 Sum_probs=26.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.||+|+|-|..|+.+++++.+. ++++++++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKA-GMKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 4999999999999999988766 69999884
No 451
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=57.04 E-value=12 Score=32.94 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=21.3
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
||++||+|+|-|-..+.+++.+.+..+ +++.+.
T Consensus 13 ~~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~ 45 (412)
T 1vkz_A 13 MKAVRVHILGSGGREHAIGWAFAKQGY-EVHFYP 45 (412)
T ss_dssp ---CEEEEEECSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCEEEEECCCHHHHHHHHHHHhCCC-CEEEEC
Confidence 677899999999333344555556667 888884
No 452
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=57.03 E-value=11 Score=32.47 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=26.6
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++|-|.| .|.||+.+++.+.+. +.+|+++.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV-GHHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEEC
Confidence 47899999 899999999999876 477777653
No 453
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=56.78 E-value=37 Score=30.64 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=25.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|-|+|.|++|...++.+.+.. .+++.|.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~ 42 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNA 42 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEc
Confidence 68999999999999999998874 6666554
No 454
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=56.72 E-value=13 Score=32.00 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=26.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.||+|+|-|..|+.+++++.+. +++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~-G~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKM-GFYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4899999999999999998776 478887754
No 455
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=56.21 E-value=14 Score=30.76 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=26.6
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|-| .|.||+.+++.+++. +.+|+++.-
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH-GYDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC-CCcEEEEec
Confidence 46899999 899999999999887 477777643
No 456
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=55.67 E-value=12 Score=35.07 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=28.1
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+++|-|-| .|.||+.+++.+++.++.+|+++.-
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46899999 8999999999999875678888754
No 457
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=55.32 E-value=13 Score=33.71 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=27.1
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++||-|.| .|.||+.+++.+++. +.+|+++.-
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~-G~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG-GHEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 46999999 899999999999887 468887754
No 458
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=54.99 E-value=14 Score=30.43 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=25.6
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+||-|.| .|.||+.+++.+.+. +.+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL-GYEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCEEEEEeC
Confidence 3799999 799999999999887 468777743
No 459
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=54.76 E-value=15 Score=30.85 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.5
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++|-|-| .|.||+.+++.+.+. +.+|+++.-
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~-g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQ-GHEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGG-TCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 36899999 799999999999876 478877754
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=54.54 E-value=12 Score=32.28 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=24.6
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.||+|+|.|.+|..++..++...-+.-+.+.|.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di 47 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDL 47 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 699999999999988888876543333445565
No 461
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=54.44 E-value=15 Score=30.57 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=26.8
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+||-|-| .|.||+.+++.+++. +.+|+++.-
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEK-GYRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHC-CCeEEEEeC
Confidence 37999999 899999999999887 478887764
No 462
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=54.32 E-value=13 Score=31.92 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=24.3
Q ss_pred cEEEEE-ccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGIN-GFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgIn-G~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
-+|.|+ |.|.||...++.+... +.+++++.
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~ 199 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAF-GAEVYATA 199 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEe
Confidence 478999 5899999999988766 46887775
No 463
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=54.28 E-value=13 Score=34.19 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=25.7
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++.|.|+|++|+.+++.+.+. +.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4789999999999999999876 577777753
No 464
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=54.10 E-value=13 Score=31.68 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=26.6
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCc-eEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDV-ELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~-~vvaInd 35 (218)
.++|-|-| .|.||+.+++.+++.++. +|+++.-
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 36899999 899999999999877334 7777654
No 465
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=53.99 E-value=12 Score=32.13 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=23.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||+|+|. |.+|..++..+...+-+.-+.+.|.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di 34 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI 34 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC
Confidence 38999997 9999999988876643233444454
No 466
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=53.94 E-value=16 Score=30.62 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=24.5
Q ss_pred EEEEEcc-ChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+|.|+|. |.+|...++.+... +.+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeC
Confidence 4899996 99999999888766 468888764
No 467
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=53.87 E-value=12 Score=31.52 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=23.1
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCC-ceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDD-VELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~-~~vvaIn 34 (218)
||++||.|.|-|.. ..++|.+.+..+ .+++++.
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d 35 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTAD 35 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEe
Confidence 77789999998854 345566654433 7888774
No 468
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=53.32 E-value=15 Score=31.50 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.9
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
+||.|.|. |.+|..++..++..+.+.-+.+-|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 38999997 9999999998887654332334443
No 469
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=52.84 E-value=11 Score=30.80 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=25.5
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|++.+|-|-| .|.||+.+++.+.+.. .+|+.+.
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~ 34 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLAD 34 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEe
Confidence 6556899999 8999999999988763 5655443
No 470
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=52.68 E-value=19 Score=29.75 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=23.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
.||.|+|.|.+|..+++.+.... + +|+.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~G-v~~i~lvD 62 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAG-VGNLTLLD 62 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 58999999999999999998653 5 444443
No 471
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=52.53 E-value=14 Score=30.65 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=26.7
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|++.+|.|+|.|..|-..+..+.+. +++++-+.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie 33 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILD 33 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEE
Confidence 6567999999999999999888776 46766554
No 472
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=52.47 E-value=18 Score=31.82 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=20.4
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRD 26 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~ 26 (218)
|..+||.|.| .|.||..++-.+...+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhcc
Confidence 4568999999 5999998877665543
No 473
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=52.40 E-value=16 Score=30.43 Aligned_cols=31 Identities=16% Similarity=0.292 Sum_probs=25.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|-| .|.||+.+++.+++. +.+|+++..
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~-G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQK-GYAVNTTVR 41 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCchHHHHHHHHHHHHC-CCEEEEEEc
Confidence 5899999 899999999999886 467776543
No 474
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=52.26 E-value=8.6 Score=31.27 Aligned_cols=31 Identities=26% Similarity=0.590 Sum_probs=25.8
Q ss_pred EEEEEc-cChhHHHHHHHHHcC-CCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~-~~~~vvaInd 35 (218)
+|-|.| .|.||+.+++.+.+. ++.+|+++.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 688999 799999999999876 4678887754
No 475
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=52.25 E-value=10 Score=32.28 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=24.1
Q ss_pred cEEEEEccC-hhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFG-RIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~G-rIGr~~~r~~~~~~~~~vvaInd 35 (218)
-+|.|.|.| .||...++.+... +.+++++..
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~ 177 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTR 177 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeC
Confidence 478999975 9999998877655 468887753
No 476
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=52.20 E-value=14 Score=30.86 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=25.6
Q ss_pred CccEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 2 ~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
|++||+|+|-| .|+.+++++.+. +++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~-G~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE-GFETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT-TCCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhC-CCEEEEEEC
Confidence 24799999999 999999988776 588877743
No 477
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=52.07 E-value=17 Score=31.77 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=24.8
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|.|+|.|.+|+..++.+.... .+|++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 58999999999999999988775 5766554
No 478
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=51.78 E-value=23 Score=30.03 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=26.0
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++.|+|.|.+||.+++++.+.. .+|+.+|-
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nR 149 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNR 149 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998876 67766654
No 479
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=51.53 E-value=15 Score=31.43 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=26.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.||+|.|-|..|+.+++++.+. +++++.+..
T Consensus 2 ~~Ililg~g~~~~~~~~a~~~~-G~~v~~~~~ 32 (365)
T 2z04_A 2 LTVGILGGGQLGWMTILEGRKL-GFKFHVLED 32 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4899999999999999988766 688887753
No 480
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=51.42 E-value=20 Score=30.39 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=24.5
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
.++.|+|.|.+|+.+++++... ++ +|+.+|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~n 172 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST-AAERIDMAN 172 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEEC
T ss_pred CEEEEECcHHHHHHHHHHHHHC-CCCEEEEEe
Confidence 5899999999999999999876 45 665544
No 481
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=51.39 E-value=73 Score=28.06 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=28.0
Q ss_pred cEEEEEcc-ChhHHHHHHHHHcCCCceEEEEeCCCcChhhhhhh
Q 027805 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (218)
Q Consensus 4 ~kvgInG~-GrIGr~~~r~~~~~~~~~vvaInd~~~~~~~~ayl 46 (218)
-+|.|.|. |.||...++.+... +.+++++.. +.+.+..+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~---~~~~~~~~ 261 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVS---SAQKEAAV 261 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHH
Confidence 47899996 99999998888766 478777753 34444333
No 482
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=51.29 E-value=14 Score=30.99 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=25.4
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.++|-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 36899999 7999999999998874 67777643
No 483
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=51.25 E-value=13 Score=30.35 Aligned_cols=28 Identities=25% Similarity=0.384 Sum_probs=24.4
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
||-|.| .|.||+.+++.+. . +.+|+++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~ 30 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALD 30 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEEC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEec
Confidence 899999 7999999999988 5 68888874
No 484
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=51.09 E-value=18 Score=31.59 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=25.5
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
|+.++|.|+|.|..|...+..+.+. +.+++.+-
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E 33 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIID 33 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEE
Confidence 6668999999999999888887765 46666554
No 485
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=50.87 E-value=20 Score=29.84 Aligned_cols=30 Identities=27% Similarity=0.295 Sum_probs=25.1
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.++.|.|.|-+|+.+++.+.... .+|+.++
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~ 149 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD-CAVTITN 149 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHcC-CEEEEEE
Confidence 58999999999999999998875 6766554
No 486
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=50.81 E-value=18 Score=30.48 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.8
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
++|-|.| .|.||+.+++.+++.+ .+|+++.-
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999998874 68777643
No 487
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=50.78 E-value=15 Score=29.85 Aligned_cols=30 Identities=30% Similarity=0.611 Sum_probs=26.1
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.||-|.| .|.||+.+++.+.+. +.+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGK-NVEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS-SEEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhC-CCeEEecc
Confidence 6899999 899999999999876 47888874
No 488
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=50.15 E-value=21 Score=28.11 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=27.5
Q ss_pred CCccEEEEEc-cChhHHHHHHHHHcCCC-ceEEEEeC
Q 027805 1 MGKVKIGING-FGRIGRLVARVILQRDD-VELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG-~GrIGr~~~r~~~~~~~-~~vvaInd 35 (218)
|+..++-|.| .|-||+.+++.+.+... .+|+++.-
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 5556788999 89999999999988743 67776654
No 489
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=49.75 E-value=18 Score=30.97 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=26.0
Q ss_pred ccEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 3 KVKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 3 ~~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
+.+|-|-| .|.||+.+++.+++. +.+|+++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~-G~~V~~~~ 42 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKK-NYEVCIVD 42 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhC-CCeEEEEE
Confidence 36999999 999999999999887 47888774
No 490
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=49.63 E-value=15 Score=32.45 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=27.4
Q ss_pred CCccEEEEEccChhHHHHHHHHHcC-CCceEEEEeC
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~-~~~~vvaInd 35 (218)
|++.+|.|+|.|..|-..++.+.+. ++.+++-+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~ 36 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA 36 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC
Confidence 6668999999999999988888654 4678777743
No 491
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=49.50 E-value=13 Score=30.06 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=25.3
Q ss_pred EEEEEc-cChhHHHHHHHHHcC-CCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQR-DDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~-~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+.+. ++.+|+++.-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 578999 799999999999876 4578887753
No 492
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=49.16 E-value=22 Score=28.03 Aligned_cols=31 Identities=16% Similarity=0.359 Sum_probs=25.2
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
.+|-|.| .|.||+.+++.+.+. +.+|+++.-
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARA-GHTVIGIDR 33 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred cEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeC
Confidence 3789999 899999999999886 467777643
No 493
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=49.12 E-value=17 Score=33.68 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=25.3
Q ss_pred cEEEEEccChhHHHHHHHHHcCCCceEEEEeCC
Q 027805 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (218)
Q Consensus 4 ~kvgInG~GrIGr~~~r~~~~~~~~~vvaInd~ 36 (218)
.+++|.|+|.||+.+++.+.... .+|+ +.|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G-A~Vi-v~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG-ARVI-VTEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 58999999999999999988764 6655 4565
No 494
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=49.05 E-value=21 Score=27.34 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=25.0
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||+-|.| .|.||+.+++.+. . +.+|+++.-
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r 34 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-K-KAEVITAGR 34 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-T-TSEEEEEES
T ss_pred cEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEec
Confidence 5899999 8999999999998 5 578777643
No 495
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=49.01 E-value=17 Score=30.63 Aligned_cols=30 Identities=10% Similarity=0.152 Sum_probs=24.2
Q ss_pred cEEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 4 ~kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
.+|-|.| .|.||+..++.+.... .+++++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 4789999 8999999999887664 6777764
No 496
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=48.96 E-value=25 Score=30.00 Aligned_cols=30 Identities=7% Similarity=0.172 Sum_probs=22.6
Q ss_pred EEEEE-ccChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGIN-GFGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgIn-G~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
+|-|. |.|.||...++.+... +.+++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEE-GFRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH-TCEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeC
Confidence 45555 6999999998887765 468888764
No 497
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=48.88 E-value=18 Score=29.53 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=25.2
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEeC
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaInd 35 (218)
||-|.| .|.||+.+++.+++.+..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 578999 7999999999999874367777754
No 498
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=48.43 E-value=21 Score=29.40 Aligned_cols=29 Identities=24% Similarity=0.515 Sum_probs=24.7
Q ss_pred EEEEEc-cChhHHHHHHHHHcCCCceEEEEe
Q 027805 5 KIGING-FGRIGRLVARVILQRDDVELVAVN 34 (218)
Q Consensus 5 kvgInG-~GrIGr~~~r~~~~~~~~~vvaIn 34 (218)
||-|.| .|.||+.+++.+.+. +.+|+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~ 31 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLAR-GLEVAVLD 31 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred EEEEEeCCcHHHHHHHHHHHHC-CCEEEEEE
Confidence 789999 899999999999876 47877764
No 499
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=48.40 E-value=19 Score=30.21 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=25.9
Q ss_pred CCccEEEEEccChhHHHHHHHHHcCCCc-eEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~r~~~~~~~~-~vvaIn 34 (218)
|+..+|.|+|.|..|-..++.+.+. +. +++-|.
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie 35 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDF-GITDVIILE 35 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEe
Confidence 6557999999999999999888765 35 666553
No 500
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=48.17 E-value=9.9 Score=32.49 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=22.5
Q ss_pred CCccEEEEEccChhHHHHH-HHHH----cCCCceEEEEe
Q 027805 1 MGKVKIGINGFGRIGRLVA-RVIL----QRDDVELVAVN 34 (218)
Q Consensus 1 m~~~kvgInG~GrIGr~~~-r~~~----~~~~~~vvaIn 34 (218)
||++||||+-+|.||...+ ..++ +++++++-.+.
T Consensus 1 mmvvKiGiiKlGNigts~~idl~LDErAdRedI~vrv~g 39 (283)
T 1qv9_A 1 MTVAKAIFIKCGNLGTSMMMDMLLDERADREDVEFRVVG 39 (283)
T ss_dssp -CCEEEEEEECSCCHHHHHTTGGGSTTSCCSSEEEEEEE
T ss_pred CeeEEEEEEEecccchHHHHHHHHHhhhccCCceEEEec
Confidence 7789999999999998543 3333 33455555443
Done!