BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027807
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5Z4|HEBP2_HUMAN Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
Length = 205
Score = 83.6 bits (205), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 37 FEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPG 96
+E+R Y + W+S V E + + A GF +L YIQG N +I MT+P+ + + PG
Sbjct: 38 YEIRHYGPAKWVSTSV-ESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPG 96
Query: 97 AGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEA 156
+GP ++LY+P + Q DPP PL E + + V VR F GF+ + ++
Sbjct: 97 SGPFSESTITISLYIPSEQQFDPPRPL-ESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQL 155
Query: 157 DNLSFSLRRSPWANSTSSDSGYAYSVAQYSPPLQFIGRVNEIWV 200
L+ LR + D Y+ A Y+ P++ + R NE+W+
Sbjct: 156 LTLASILRE----DGKVFDEKVYYT-AGYNSPVKLLNRNNEVWL 194
>sp|Q9WU63|HEBP2_MOUSE Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=1 SV=1
Length = 205
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 37 FEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPG 96
+E+R Y + W+S V E L + A GF +L YIQG N +I +T+P+ + + PG
Sbjct: 38 YEIRHYGPAKWVSTCV-ESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPG 96
Query: 97 AGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEA 156
+ P ++LY+P + Q DPP P E + + V VR F GF+ + ++
Sbjct: 97 SSPFSESTITISLYIPSEQQPDPPRPS-ESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQL 155
Query: 157 DNLSFSLRRSPWANSTSSDSGYAYSVAQYSPPLQFIGRVNEIWV 200
L+ LR + + A YS P Q + R NE+W+
Sbjct: 156 LTLANILREEGKVFNEK-----VFYTAGYSSPFQLLDRNNEVWL 194
>sp|Q6NU05|HEBP1_XENLA Heme-binding protein 1 OS=Xenopus laevis GN=hebp1 PE=2 SV=1
Length = 190
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 37 FEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPG 96
FE R Y ++S V + F +A+ G RL +Y+ G+N ++ + MTSP++ + P
Sbjct: 31 FEEREYEGGKFISTEVSGK-PFDEASKEGVLRLLKYVGGSNNKSAGMGMTSPVIINSYPS 89
Query: 97 AGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEA 156
V L +P ++Q+DPP P + + +S + +F G+A KEA
Sbjct: 90 ENDTLQPNVKVLLRIPSQYQADPPVPTDNT-IQIEDRESVTLYSTQFGGYA------KEA 142
Query: 157 DNLSFSLR-RSPWANSTSSDSGYAYSVAQYSPPLQFIGRVNEIW 199
D +S + + RS S S Y Y Y PP++ GR NE+W
Sbjct: 143 DYVSHAAKLRSCLGPDISYHSDY-YMCCGYDPPMKPYGRRNEVW 185
>sp|Q6DJ66|HEBP1_XENTR Heme-binding protein 1 OS=Xenopus tropicalis GN=hebp1 PE=2 SV=1
Length = 190
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 37 FEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPG 96
FE R Y ++S V + F +A+ RL +Y+ G+N + + MTSP+V + P
Sbjct: 31 FEEREYEGGKFVSTEVSGK-PFDEASKEAVLRLLKYVGGSNQKYAGMGMTSPVVITSYPA 89
Query: 97 AGPLHSYAYVVTLYLPDKFQSDPPTPLPE-IHLNPFEWDSHCVAVRKFSGFAIDEVIVKE 155
V L +P ++Q+DPP P + IH+ + +S +F G+A KE
Sbjct: 90 ENETLQPNVKVLLRIPSQYQADPPVPTDDTIHIE--DRESVTFYSTQFGGYA------KE 141
Query: 156 ADNLSFSLR-RSPWANSTSSDSGYAYSVAQYSPPLQFIGRVNEIW 199
AD +S + + RS S + + Y Y PP++ GR NE+W
Sbjct: 142 ADYVSHAAKLRSCLGPDISYHTDH-YMCCGYDPPMKPYGRRNEVW 185
>sp|Q9R257|HEBP1_MOUSE Heme-binding protein 1 OS=Mus musculus GN=Hebp1 PE=1 SV=2
Length = 190
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 68 RLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIH 127
++ +Y+ G N + MT P+ +L P V +P++FQ PP P E
Sbjct: 61 KIMKYVGGTNDKGVGMGMTVPVSFALFPNEDGSLQKKLKVWFRIPNQFQGSPPAPSDE-S 119
Query: 128 LNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSGYAYSVAQYSP 187
+ E + V +F G+A + V A L +L +P ++ G Y A Y P
Sbjct: 120 VKIEEREGITVYSTQFGGYAKEADYVAHATQLRTTLEGTP-----ATYQGDVYYCAGYDP 174
Query: 188 PLQFIGRVNEIWV 200
P++ GR NE+W+
Sbjct: 175 PMKPYGRRNEVWL 187
>sp|Q9NRV9|HEBP1_HUMAN Heme-binding protein 1 OS=Homo sapiens GN=HEBP1 PE=1 SV=1
Length = 189
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 68 RLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIH 127
++ +Y G N + MT PI ++ P V +P++FQSDPP P +
Sbjct: 61 KVAKYAGGTNDKGIGMGMTVPISFAVFPNEDGSLQKKLKVWFRIPNQFQSDPPAP-SDKS 119
Query: 128 LNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSGYAYSVAQYSP 187
+ E + V +F G+A KEAD ++ + R T++ G Y Y P
Sbjct: 120 VKIEEREGITVYSMQFGGYA------KEADYVAQATRLRAALEGTATYRGDIYFCTGYDP 173
Query: 188 PLQFIGRVNEIWV 200
P++ GR NEIW+
Sbjct: 174 PMKPYGRRNEIWL 186
>sp|Q5ZMB2|HEBP1_CHICK Heme-binding protein 1 OS=Gallus gallus GN=HEBP1 PE=2 SV=1
Length = 189
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 58 FAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQS 117
F +A+ +L +Y+ G+N + + MT+P+ + P V L +P++FQ+
Sbjct: 51 FDEASKEAALKLLKYVGGSNDKGAGMGMTAPVSITAFPAEDGSLQQKVKVYLRIPNQFQA 110
Query: 118 DPPTPLPEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSG 177
PP P E + E + +F G+A KE D ++++ + S ++
Sbjct: 111 SPPCPSDE-SIKIEERQGMTIYSTQFGGYA------KEVDYVNYAAKLKTALGSEAAYRK 163
Query: 178 YAYSVAQYSPPLQFIGRVNEIW 199
Y Y PP++ GR NE+W
Sbjct: 164 DFYFCNGYDPPMKPYGRRNEVW 185
>sp|Q5ISC6|HEBP1_PIG Heme-binding protein 1 OS=Sus scrofa GN=HEBP1 PE=2 SV=1
Length = 189
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 68 RLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIH 127
++ +Y+ G+N + MT PI ++ P G V +P++FQS+PP P +
Sbjct: 61 KVMKYVGGSNDKGIGMGMTVPISFAVFPSDGGSLQKKLKVWFRIPNEFQSNPPVPSDD-S 119
Query: 128 LNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSGYAYSVAQYSP 187
+ E +S V +F G+A KEAD ++ + + ++ Y Y P
Sbjct: 120 IKIEERESITVYSLQFGGYA------KEADYVARAAQLRTALEGIATCRSDVYFCTGYDP 173
Query: 188 PLQFIGRVNEIWV 200
P++ GR NE+W+
Sbjct: 174 PMKPYGRRNEVWL 186
>sp|Q148C9|HEBP1_BOVIN Heme-binding protein 1 OS=Bos taurus GN=HEBP1 PE=2 SV=1
Length = 191
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 68 RLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPE-I 126
++ +Y+ G+N + MT PI ++ P V +P+KFQSDPP P + I
Sbjct: 61 KVMKYVGGSNDKGLGMGMTVPISFAVFPSDDGDLQKKLKVWFRIPNKFQSDPPAPSDDSI 120
Query: 127 HLNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSGYAYSVAQYS 186
+ E V +F G+A +A L +L ST+ Y Y
Sbjct: 121 KIEDRE--GITVYSTQFGGYAKAADYAAQAAQLRSAL------ESTAKYQTDFYFCTGYD 172
Query: 187 PPLQFIGRVNEIWV 200
PP++ GR NE+W+
Sbjct: 173 PPMKPYGRRNEVWL 186
>sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis
thaliana GN=At3g10130 PE=1 SV=1
Length = 309
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 66 FHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAG-PLHSYAYVVT------------LYLP 112
F+ L +Y+ G N ++ MT+P+VT V G + V+T +P
Sbjct: 158 FNVLAEYLFGKNTIKEKMEMTTPVVTRKVQSVGEKMEMTTPVITSKAKDQNQWRMSFVMP 217
Query: 113 DKFQSDPPTPL-PEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANS 171
K+ S+ P P P + + + VAV FSG+ DE I + L +L+
Sbjct: 218 SKYGSNLPLPKDPSVKIQ--QVPRKIVAVVAFSGYVTDEEIERRERELRRALQND---KK 272
Query: 172 TSSDSGYAYSVAQYSPP--LQFIGRVNEIWVDID 203
G ++ VAQY+PP L F+ R NE+ ++++
Sbjct: 273 FRVRDGVSFEVAQYNPPFTLPFMRR-NEVSLEVE 305
>sp|P25294|SIS1_YEAST Protein SIS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SIS1 PE=1 SV=1
Length = 352
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 56 LSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAG 98
LSF K +LLGF + Q I G L SR+ P TS PG G
Sbjct: 274 LSF-KESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQG 315
>sp|A8C754|THADA_CHICK Thyroid adenoma-associated protein homolog OS=Gallus gallus
GN=THADA PE=2 SV=1
Length = 1930
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 20/149 (13%)
Query: 22 AIESPQYAVVHEESDFEVRLYSQSTWMSARVREELSFAKATLLG-FHRLFQYIQGANL-- 78
A++S + E +V LY + A E+ + +A++ F + Q++Q A L
Sbjct: 115 AVQSFVCCLREELKTTDVYLYRKVLDNLASCMEDFNLGRASITNLFEEVLQFLQKALLDI 174
Query: 79 -------NNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPF 131
N +RI T + L+ A V + L K Q + L + H F
Sbjct: 175 QEENRSNNGNRIVQTRLMHDLLM---------AIKVAMMLVQKLQENIQGSLWKNH-ESF 224
Query: 132 EWDSHCVAVRKFSGFAIDEVIVKEADNLS 160
W S C ++ S F +DE +++ S
Sbjct: 225 VWQSMCNLLKSSSDFLMDETLLQTVQTTS 253
>sp|P58350|AATB_RHIME Aspartate aminotransferase B OS=Rhizobium meliloti (strain 1021)
GN=aatB PE=3 SV=1
Length = 410
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 165 RSPWA--NSTSSDSGYAYSVAQYSPPLQFIGRVNEIWVDID 203
R+ W NS S+ SG AYS A Y P L+ + R +W+ +D
Sbjct: 174 RTRWVLLNSPSNPSGAAYSAADYRPLLEVLLRHPHVWLLVD 214
>sp|Q9ZLR4|Y567_HELPJ UPF0118 membrane protein jhp_0514 OS=Helicobacter pylori (strain
J99) GN=jhp_0514 PE=3 SV=1
Length = 349
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 10 LSTLLCMVVLCKAIESPQYAVVHEESD--FEV---RLYSQSTWMSARVREELSFAKATLL 64
+S+ LC++VL + P Y +V++ S+ FE+ +L + W+ + E LS A
Sbjct: 54 ISSFLCVLVLASVVIVPLYFIVYKGSNVIFEINFEKLSALIKWLKGTITENLSHFPAIHD 113
Query: 65 GFHRLFQYIQGANLNNSRIAMTSPI 89
G + + A++ + ++S I
Sbjct: 114 GVSKFLENFSAASITGYLLKVSSYI 138
>sp|Q8YPK5|TRUA_NOSS1 tRNA pseudouridine synthase A OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=truA PE=3 SV=1
Length = 282
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 52 VREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYL 111
V+EE+ A A +LG H + GA +S + + + G P H +A V+ YL
Sbjct: 36 VQEEIETAIAKILGHHVT---LHGAGRTDSGVHAAAQVAHFDATGLIPAHKWASVINSYL 92
Query: 112 P 112
P
Sbjct: 93 P 93
>sp|Q0V3H0|ARO1_PHANO Pentafunctional AROM polypeptide OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_01444 PE=3
SV=2
Length = 1661
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 57 SFAKATLLGFHRL--FQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLY 110
S A+ LL HRL + ++ N+S T P TS++P PL++ A+V+ L+
Sbjct: 1578 SVARLQLLSHHRLPRYSHLNSNYSNHSAHCSTVPAKTSILPYHRPLYTLAFVIKLH 1633
>sp|C1A8P2|SECD_GEMAT Protein translocase subunit SecD OS=Gemmatimonas aurantiaca (strain
T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=secD PE=3
SV=1
Length = 556
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 51 RVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYA 104
R+REEL K+T L F++ GA ++ S + S +V G GP+ +A
Sbjct: 467 RIREELDHGKSTRLAIDEGFRHALGAIIDTSAATILSGMVLYQY-GTGPVRGFA 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,641,818
Number of Sequences: 539616
Number of extensions: 3150433
Number of successful extensions: 5980
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5956
Number of HSP's gapped (non-prelim): 21
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)