Your job contains 1 sequence.
>027808
MAWCSLRSLNVPTIDMGALRTRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTSAV
SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTI
YVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNE
IYAKYFPSPAPARATYQVAALPLDARVEIECIAALPNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027808
(218 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092374 - symbol:AT3G20390 "AT3G20390" species... 390 9.8e-66 2
MGI|MGI:1095401 - symbol:Hrsp12 "heat-responsive protein ... 261 3.4e-32 2
UNIPROTKB|P52758 - symbol:HRSP12 "Ribonuclease UK114" spe... 270 5.5e-32 2
UNIPROTKB|Q3T114 - symbol:HRSP12 "Ribonuclease UK114" spe... 255 6.1e-31 2
UNIPROTKB|E1C7E1 - symbol:HRSP12 "Uncharacterized protein... 267 2.0e-30 2
UNIPROTKB|F1S0M2 - symbol:HRSP12 "Uncharacterized protein... 252 2.6e-30 2
TIGR_CMR|CHY_2460 - symbol:CHY_2460 "endoribonuclease L-P... 206 5.2e-28 2
ZFIN|ZDB-GENE-040718-315 - symbol:hrsp12 "heat-responsive... 225 7.4e-27 2
UNIPROTKB|H0YB34 - symbol:HRSP12 "Ribonuclease UK114" spe... 270 1.2e-26 2
UNIPROTKB|Q8U308 - symbol:yjgF "Enamine/imine deaminase" ... 207 1.0e-25 2
DICTYBASE|DDB_G0277761 - symbol:DDB_G0277761 "endoribonuc... 194 1.7e-25 2
ASPGD|ASPL0000065252 - symbol:AN7040 species:162425 "Emer... 226 1.5e-24 2
TIGR_CMR|CJE_1579 - symbol:CJE_1579 "endoribonuclease L-P... 221 4.9e-24 2
TIGR_CMR|GSU_2235 - symbol:GSU_2235 "endoribonuclease L-P... 184 1.0e-23 2
SGD|S000000859 - symbol:HMF1 "Member of the p14.5 protein... 190 8.8e-23 2
RGD|70940 - symbol:Hrsp12 "heat-responsive protein 12" sp... 262 1.3e-22 1
UNIPROTKB|H0YBX3 - symbol:HRSP12 "Ribonuclease UK114" spe... 252 1.5e-21 1
FB|FBgn0086691 - symbol:UK114 "UK114" species:7227 "Droso... 194 1.6e-21 2
POMBASE|SPBC2G2.04c - symbol:mmf1 "YjgF family protein Mm... 197 3.2e-21 2
ASPGD|ASPL0000015000 - symbol:AN11062 species:162425 "Eme... 178 5.2e-21 2
UNIPROTKB|P0AGL2 - symbol:tdcF "predicted enamine/imine d... 174 6.6e-21 2
UNIPROTKB|P0AGL3 - symbol:tdcF "Putative reactive interme... 174 6.6e-21 2
UNIPROTKB|P0AGL4 - symbol:tdcF "Putative reactive interme... 174 6.6e-21 2
SGD|S000001313 - symbol:MMF1 "Mitochondrial protein requi... 173 8.4e-21 2
POMBASE|SPAC1039.10 - symbol:mmf2 "homologous Pmf1 factor... 197 1.1e-20 2
UNIPROTKB|G4MY05 - symbol:MGG_10440 "Endoribonuclease L-P... 158 1.4e-20 2
TIGR_CMR|SO_1404 - symbol:SO_1404 "endoribonuclease L-PSP... 174 3.6e-20 2
UNIPROTKB|P0AF93 - symbol:ridA "predicted enamine/imine d... 162 3.9e-19 2
UNIPROTKB|P0AF94 - symbol:yjgF "Enamine/imine deaminase" ... 162 3.9e-19 2
UNIPROTKB|P0AF95 - symbol:yjgF "Enamine/imine deaminase" ... 162 3.9e-19 2
UNIPROTKB|Q7CP78 - symbol:ridA "Enamine/imine deaminase" ... 165 5.0e-19 2
TIGR_CMR|DET_1052 - symbol:DET_1052 "endoribonuclease L-P... 164 2.7e-18 2
UNIPROTKB|Q9KP64 - symbol:VC_2512 "Putative uncharacteriz... 159 3.4e-18 2
TIGR_CMR|VC_2512 - symbol:VC_2512 "conserved hypothetical... 159 3.4e-18 2
TIGR_CMR|BA_0046 - symbol:BA_0046 "putative endoribonucle... 212 2.5e-17 1
UNIPROTKB|P37552 - symbol:yabJ "Enamine/imine deaminase" ... 207 8.6e-17 1
ASPGD|ASPL0000035043 - symbol:AN9080 species:162425 "Emer... 132 1.0e-16 2
TIGR_CMR|CPS_4974 - symbol:CPS_4974 "putative endoribonuc... 190 5.4e-15 1
ASPGD|ASPL0000028527 - symbol:AN5543 species:162425 "Emer... 176 1.6e-13 1
UNIPROTKB|G4N2M8 - symbol:MGG_07621 "Endoribonuclease L-P... 173 3.4e-13 1
TIGR_CMR|SO_0358 - symbol:SO_0358 "endoribonuclease L-PSP... 171 5.6e-13 1
TIGR_CMR|CBU_0304 - symbol:CBU_0304 "endoribonuclease L-P... 170 7.1e-13 1
TIGR_CMR|SPO_2709 - symbol:SPO_2709 "endoribonuclease L-P... 133 1.5e-11 2
UNIPROTKB|P0AFQ5 - symbol:rutC "predicted aminoacrylate p... 140 1.1e-09 1
UNIPROTKB|Q0BZ17 - symbol:HNE_2586 "Amidohydrolase family... 144 3.1e-09 2
TIGR_CMR|SPO_2000 - symbol:SPO_2000 "endoribonuclease L-P... 122 1.4e-07 1
TIGR_CMR|CPS_2046 - symbol:CPS_2046 "endoribonuclease, L-... 98 3.0e-07 2
UNIPROTKB|G4N4Y7 - symbol:MGG_16750 "Uncharacterized prot... 98 5.2e-07 2
UNIPROTKB|P0AEB7 - symbol:yoaB "conserved protein" specie... 114 1.2e-06 1
UNIPROTKB|Q8EJW9 - symbol:SO_0337 "YER057c/Yigf/Uk114 fam... 114 1.2e-06 1
TIGR_CMR|SO_0337 - symbol:SO_0337 "conserved hypothetical... 114 1.2e-06 1
UNIPROTKB|Q9KRT0 - symbol:VC1556 "Putative uncharacterize... 111 2.6e-06 1
TIGR_CMR|VC_1556 - symbol:VC_1556 "conserved hypothetical... 111 2.6e-06 1
TIGR_CMR|CPS_3858 - symbol:CPS_3858 "endoribonuclease, L-... 109 4.4e-06 1
UNIPROTKB|O07205 - symbol:MT2777.1 "Conserved protein" sp... 98 5.1e-06 2
TIGR_CMR|SPO_2949 - symbol:SPO_2949 "endoribonuclease L-P... 108 5.6e-06 1
TIGR_CMR|CJE_0372 - symbol:CJE_0372 "endoribonuclease L-P... 104 1.6e-05 1
TIGR_CMR|BA_2691 - symbol:BA_2691 "endoribonuclease L-PSP... 101 3.6e-05 1
DICTYBASE|DDB_G0278373 - symbol:DDB_G0278373 "endoribonuc... 121 0.00010 1
TIGR_CMR|CPS_4240 - symbol:CPS_4240 "endoribonuclease, L-... 95 0.00017 1
SGD|S000004133 - symbol:DPH6 "Diphthamide synthetase" spe... 116 0.00036 1
TIGR_CMR|SPO_1005 - symbol:SPO_1005 "endoribonuclease L-P... 103 0.00065 1
>TAIR|locus:2092374 [details] [associations]
symbol:AT3G20390 "AT3G20390" species:3702 "Arabidopsis
thaliana" [GO:0004521 "endoribonuclease activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739 GO:GO:0005773
GO:GO:0046686 GO:GO:0009570 EMBL:CP002686 GO:GO:0009941
GO:GO:0009579 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
UniGene:At.71273 UniGene:At.8179 EMBL:AF375446 EMBL:AY060547
EMBL:AY086036 EMBL:AK227774 IPI:IPI00529853 RefSeq:NP_188674.1
HSSP:P52758 ProteinModelPortal:Q94JQ4 SMR:Q94JQ4 IntAct:Q94JQ4
STRING:Q94JQ4 PRIDE:Q94JQ4 ProMEX:Q94JQ4 EnsemblPlants:AT3G20390.1
GeneID:821584 KEGG:ath:AT3G20390 TAIR:At3g20390 InParanoid:Q94JQ4
PhylomeDB:Q94JQ4 ProtClustDB:CLSN2684749 Genevestigator:Q94JQ4
Uniprot:Q94JQ4
Length = 187
Score = 390 (142.3 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 74/88 (84%), Positives = 86/88 (97%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TGKFVS+++EDQTEQVLKN+GEILKASGADYSSVVKTTI+LADL DFKTVNEIYAKYFP
Sbjct: 100 ETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVNEIYAKYFP 159
Query: 188 SPAPARATYQVAALPLDARVEIECIAAL 215
+P+PAR+TYQVAALPL+A++EIECIA L
Sbjct: 160 APSPARSTYQVAALPLNAKIEIECIATL 187
Score = 297 (109.6 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 65/102 (63%), Positives = 76/102 (74%)
Query: 1 MAWCSLRSLNVPTIDMG-ALR-TRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTS 58
M W RS+N PT+D+ ALR TR+ L A G+GCA+ AG S++R S + S PFA LS S
Sbjct: 1 MTWSVFRSINTPTLDLSTALRSTRTPLVAAGVGCATFAGVSLFRMSSR--SPPFASLSVS 58
Query: 59 AVSNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
A S KE V T KAPAALGPYSQAIKANNLVF+SGVLGL+PE
Sbjct: 59 ASSVKKEVVSTEKAPAALGPYSQAIKANNLVFLSGVLGLIPE 100
>MGI|MGI:1095401 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10090
"Mus musculus" [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 MGI:MGI:1095401
GO:GO:0005739 GO:GO:0005634 GO:GO:0090305 GO:GO:0004519
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ EMBL:U50631
EMBL:BC092375 EMBL:BC125590 EMBL:BC125592 IPI:IPI00130640
RefSeq:NP_032313.2 UniGene:Mm.143977 ProteinModelPortal:P52760
SMR:P52760 IntAct:P52760 STRING:P52760 PhosphoSite:P52760
SWISS-2DPAGE:P52760 PaxDb:P52760 PRIDE:P52760
Ensembl:ENSMUST00000022946 GeneID:15473 KEGG:mmu:15473
UCSC:uc007vlt.2 InParanoid:Q569N4 NextBio:288314 Bgee:P52760
CleanEx:MM_HRSP12 Genevestigator:P52760
GermOnline:ENSMUSG00000022323 Uniprot:P52760
Length = 135
Score = 261 (96.9 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF
Sbjct: 43 SGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQG 102
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PARA YQVAALP +RVEIE IA
Sbjct: 103 SLPARAAYQVAALPRGSRVEIEAIA 127
Score = 107 (42.7 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
S +++ + T KAPAA+GPYSQA++ + +++SG +GL P
Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDP 41
>UNIPROTKB|P52758 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006449 "regulation
of translational termination" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 EMBL:CH471060
GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006449 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597
OrthoDB:EOG41JZDQ EMBL:X95384 EMBL:AY026764 EMBL:CR456844
EMBL:CR541652 EMBL:BC010280 EMBL:BC012592 EMBL:BC093059
IPI:IPI00005038 RefSeq:NP_005827.1 UniGene:Hs.18426 PDB:1ONI
PDBsum:1ONI ProteinModelPortal:P52758 SMR:P52758 IntAct:P52758
STRING:P52758 PhosphoSite:P52758 DMDM:1717975 UCD-2DPAGE:P52758
PaxDb:P52758 PeptideAtlas:P52758 PRIDE:P52758 DNASU:10247
Ensembl:ENST00000254878 GeneID:10247 KEGG:hsa:10247 UCSC:uc003yii.1
GeneCards:GC08M099183 HGNC:HGNC:16897 HPA:HPA022856 HPA:HPA023489
MIM:602487 neXtProt:NX_P52758 PharmGKB:PA134890258
InParanoid:P52758 PhylomeDB:P52758 EvolutionaryTrace:P52758
GenomeRNAi:10247 NextBio:38824 ArrayExpress:P52758 Bgee:P52758
CleanEx:HS_HRSP12 Genevestigator:P52758 GermOnline:ENSG00000132541
Uniprot:P52758
Length = 137
Score = 270 (100.1 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S
Sbjct: 43 SGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKS 102
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PARA YQVAALP +R+EIE +A
Sbjct: 103 NFPARAAYQVAALPKGSRIEIEAVA 127
Score = 96 (38.9 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
S ++ + T KAP A+GPYSQA+ + +++SG +G+ P
Sbjct: 3 SLIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDP 41
>UNIPROTKB|Q3T114 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005739
GO:GO:0005634 GO:GO:0090305 GO:GO:0004519 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:BC102164 IPI:IPI00686803
RefSeq:NP_001029380.1 UniGene:Bt.1556 ProteinModelPortal:Q3T114
SMR:Q3T114 STRING:Q3T114 PRIDE:Q3T114 Ensembl:ENSBTAT00000016718
GeneID:504390 KEGG:bta:504390 CTD:10247 HOVERGEN:HBG003597
InParanoid:Q3T114 OrthoDB:EOG41JZDQ NextBio:20866637 Uniprot:Q3T114
Length = 137
Score = 255 (94.8 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 49/85 (57%), Positives = 64/85 (75%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF TVN++Y +YF S
Sbjct: 43 SGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQS 102
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PARA YQVAALP RVEIE IA
Sbjct: 103 SFPARAAYQVAALPKGGRVEIEAIA 127
Score = 101 (40.6 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
S +++ + T KAPAA+GPYSQA+ + +++SG LG+ P
Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDP 41
>UNIPROTKB|E1C7E1 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:AADN02024998 EMBL:AADN02024997
IPI:IPI00814279 ProteinModelPortal:E1C7E1
Ensembl:ENSGALT00000029404 Uniprot:E1C7E1
Length = 132
Score = 267 (99.0 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 51/84 (60%), Positives = 67/84 (79%)
Query: 130 GKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP 189
G+ VS I+++T+Q KN+GEILKA+G DYS+VVKTT+ LAD+KDF +NEIY ++F S
Sbjct: 44 GQLVSGGIKEETKQAFKNLGEILKAAGCDYSNVVKTTVFLADIKDFNDMNEIYGQFFKSN 103
Query: 190 APARATYQVAALPLDARVEIECIA 213
P+R ++QVAALP ARVEIE IA
Sbjct: 104 CPSRVSFQVAALPKGARVEIEAIA 127
Score = 84 (34.6 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
S +++ + T KAPA LG YSQA+ + ++++G +G+ P
Sbjct: 3 SVVRKIISTAKAPAPLGAYSQAVLVDRTMYIAGQIGIEP 41
>UNIPROTKB|F1S0M2 [details] [associations]
symbol:HRSP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL EMBL:CU234130 RefSeq:XP_001928988.1
UniGene:Ssc.8236 Ensembl:ENSSSCT00000006670 GeneID:100158002
KEGG:ssc:100158002 Uniprot:F1S0M2
Length = 137
Score = 252 (93.8 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 49/85 (57%), Positives = 64/85 (75%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ V + ++ +Q L N+GEILKA+G D+++VVKTT+LLAD+ DF TVN+IY +YF
Sbjct: 43 SGQLVPGGVVEEAKQALTNMGEILKAAGCDFTNVVKTTVLLADINDFSTVNDIYKQYFQG 102
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PARA YQVAALP RVEIE IA
Sbjct: 103 NFPARAAYQVAALPKGGRVEIEAIA 127
Score = 98 (39.6 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
+++ + T KAPAA+GPYSQA+ + +++SG +G+ P
Sbjct: 5 VRKVISTVKAPAAIGPYSQAVLVDRTIYISGQIGMDP 41
>TIGR_CMR|CHY_2460 [details] [associations]
symbol:CHY_2460 "endoribonuclease L-PSP family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004521 "endoribonuclease activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:VEMDGIM
RefSeq:YP_361254.1 ProteinModelPortal:Q3A9D0 SMR:Q3A9D0
STRING:Q3A9D0 GeneID:3726216 KEGG:chy:CHY_2460 PATRIC:21277985
BioCyc:CHYD246194:GJCN-2459-MONOMER Uniprot:Q3A9D0
Length = 125
Score = 206 (77.6 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 41/86 (47%), Positives = 60/86 (69%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
QTG+ V +E Q +Q ++NI +IL A+G ++S VVKTTI + ++ DF TVN+IY++YF
Sbjct: 38 QTGELVPGGVEAQIKQAMENIRQILSAAGMEFSHVVKTTIFITNMDDFTTVNKIYSEYFG 97
Query: 188 SPAPARATYQVAALPLDARVEIECIA 213
PAR+ VA+LP A VE+E +A
Sbjct: 98 EVFPARSCIAVASLPKGALVEVEVVA 123
Score = 122 (48.0 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+KE + T+KAP A+GPYSQAIK N +FVSG +G+ P+
Sbjct: 1 MKEVINTSKAPQAIGPYSQAIKVNGFLFVSGQIGINPQ 38
>ZFIN|ZDB-GENE-040718-315 [details] [associations]
symbol:hrsp12 "heat-responsive protein 12"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006056 Pfam:PF01042 ZFIN:ZDB-GENE-040718-315
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OMA:AGNTIYL CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:BX293540 EMBL:CR749175 EMBL:BC079492 IPI:IPI00501400
RefSeq:NP_001012315.1 UniGene:Dr.75381 SMR:Q6AXL2 STRING:Q6AXL2
Ensembl:ENSDART00000052097 GeneID:436849 KEGG:dre:436849
InParanoid:Q6AXL2 NextBio:20831280 Uniprot:Q6AXL2
Length = 135
Score = 225 (84.3 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 137 IEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATY 196
++ QT+Q L NIGEILKA+G Y +VVK T+L+ D+ +F TVN++Y ++F S PARA Y
Sbjct: 50 VQAQTKQALINIGEILKAAGCGYENVVKATVLMTDINEFNTVNDVYKQFFKSNFPARAAY 109
Query: 197 QVAALPLDARVEIECIAAL 215
QV ALP VEIE +A L
Sbjct: 110 QVVALPRGGLVEIEAVAVL 128
Score = 92 (37.4 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
+++ + T APAA+GPYSQA+ + +++SG LG+ P
Sbjct: 5 IRKIIHTAAAPAAIGPYSQAVLVDRTMYISGQLGMDP 41
>UNIPROTKB|H0YB34 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000520507 Uniprot:H0YB34
Length = 148
Score = 270 (100.1 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S
Sbjct: 54 SGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKS 113
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PARA YQVAALP +R+EIE +A
Sbjct: 114 NFPARAAYQVAALPKGSRIEIEAVA 138
Score = 45 (20.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 80 SQAIKANNLVFVSGVLGLVP 99
SQA+ + +++SG +G+ P
Sbjct: 33 SQAVLVDRTIYISGQIGMDP 52
>UNIPROTKB|Q8U308 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:186497
"Pyrococcus furiosus DSM 3638" [GO:0019239 "deaminase activity"
evidence=IDA] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE009950
GenomeReviews:AE009950_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_578397.1 HSSP:P39330 ProteinModelPortal:Q8U308 SMR:Q8U308
PRIDE:Q8U308 EnsemblBacteria:EBPYRT00000005430 GeneID:1468513
KEGG:pfu:PF0668 ProtClustDB:CLSK689587 Uniprot:Q8U308
Length = 126
Score = 207 (77.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TG+ V I+ QT QVL+NI IL+A+G + VVK T+ L D+ DF +NE+YA+YF
Sbjct: 38 KTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFG 97
Query: 188 SPAPARATYQVAALPLDARVEIECIA 213
PARA +V+ LP D +EIE IA
Sbjct: 98 ESKPARAAVEVSRLPKDVLIEIEAIA 123
Score = 99 (39.9 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+KE + AP +GPYSQAIKA N +F++G + + P+
Sbjct: 1 MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDPK 38
>DICTYBASE|DDB_G0277761 [details] [associations]
symbol:DDB_G0277761 "endoribonuclease L-PSP"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006056
dictyBase:DDB_G0277761 Pfam:PF01042 EMBL:AAFI02000022
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:XP_642502.1 ProteinModelPortal:Q86KR5 STRING:Q86KR5
EnsemblProtists:DDB0169400 GeneID:8621213 KEGG:ddi:DDB_G0277761
InParanoid:Q86KR5 OMA:VEMDGIM ProtClustDB:CLSZ2452457
Uniprot:Q86KR5
Length = 129
Score = 194 (73.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 129 TGKFVSDT-IEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
T +F S+T + QT+ L N+ I++A+G+ VVKTTILL + DF+ VN +Y+ +FP
Sbjct: 41 TMQFTSETDVSIQTKLALTNMKNIVEAAGSSMEKVVKTTILLKSMDDFQAVNTVYSTFFP 100
Query: 188 SPAPARATYQVAALPLDARVEIECIA 213
PAR+T+ VA LP +A VEIE IA
Sbjct: 101 VDPPARSTFAVACLPKNALVEIEAIA 126
Score = 110 (43.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGL 97
K V T AP A+GPYSQAI ANN VFVSG LG+
Sbjct: 4 KVVVKTTNAPGAIGPYSQAIIANNQVFVSGCLGI 37
>ASPGD|ASPL0000065252 [details] [associations]
symbol:AN7040 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:BN001304
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:AACD01000117 eggNOG:COG0251 InterPro:IPR006175
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
OrthoDB:EOG43FM6K OMA:SIIHAER RefSeq:XP_664644.1
ProteinModelPortal:Q5AXE0 STRING:Q5AXE0
EnsemblFungi:CADANIAT00000432 GeneID:2870121 KEGG:ani:AN7040.2
Uniprot:Q5AXE0
Length = 134
Score = 226 (84.6 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 40/88 (45%), Positives = 61/88 (69%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TGK V T++D+T Q++KN+ +L+ASG+ + V K + LAD+KDF+ +NE+Y + FP
Sbjct: 39 KTGKMVEGTVKDRTRQIIKNLSAVLEASGSSLADVAKVNVFLADMKDFQDMNEVYMEGFP 98
Query: 188 SPAPARATYQVAALPLDARVEIECIAAL 215
P PAR V LP+++ VEIEC A +
Sbjct: 99 EPRPARTCVCVKTLPMNSDVEIECSAVV 126
Score = 69 (29.3 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
TN APA SQA N+VF SG LG+ P+
Sbjct: 8 TNNAPAPAPFLSQATVVGNIVFCSGQLGIDPK 39
>TIGR_CMR|CJE_1579 [details] [associations]
symbol:CJE_1579 "endoribonuclease L-PSP, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000025 GenomeReviews:CP000025_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215 OMA:PYNQAVV
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
RefSeq:YP_179562.1 ProteinModelPortal:Q5HT23 STRING:Q5HT23
GeneID:3232207 KEGG:cjr:CJE1579 PATRIC:20044950
ProtClustDB:CLSK879234 BioCyc:CJEJ195099:GJC0-1609-MONOMER
Uniprot:Q5HT23
Length = 120
Score = 221 (82.9 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
+G+ S I++QT+Q LKNIG IL+ +G Y VVKTT LAD+ DF NEIYA++F +
Sbjct: 33 SGEIESHDIKEQTKQSLKNIGAILEENGISYDKVVKTTCFLADINDFVAFNEIYAEFFKA 92
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
P PAR+ + V LP A+VEIE IA
Sbjct: 93 PYPARSAFAVKDLPKKAKVEIEIIA 117
Score = 69 (29.3 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 73 PAALGPYSQAIKANNLVFVSGVLGLVPE 100
P A+GPYS + N L+F+SG L + P+
Sbjct: 5 PKAIGPYSAYREVNGLLFISGQLPINPD 32
>TIGR_CMR|GSU_2235 [details] [associations]
symbol:GSU_2235 "endoribonuclease L-PSP, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR006175
PROSITE:PS01094 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567 OMA:AGNTIYL
RefSeq:NP_953284.1 ProteinModelPortal:Q74AW4 GeneID:2687529
KEGG:gsu:GSU2235 PATRIC:22027325 ProtClustDB:CLSK924586
BioCyc:GSUL243231:GH27-2207-MONOMER Uniprot:Q74AW4
Length = 126
Score = 184 (69.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
TG+ V I QT +V+ N+ +L +G + ++VKTTI LADL DF VN +Y F +
Sbjct: 39 TGEMVDGDITVQTMRVMDNMAAVLAEAGLGFDAIVKTTIFLADLADFAAVNGVYGSRFAA 98
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PAR+T +V LP A VEIE IA
Sbjct: 99 APPARSTVEVKGLPRGALVEIEAIA 123
Score = 103 (41.3 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
+KE V T +AP A+GPYSQA++A +F+SG + L P
Sbjct: 1 MKEIVATEQAPKAIGPYSQAVRAGGFLFLSGQIPLDP 37
>SGD|S000000859 [details] [associations]
symbol:HMF1 "Member of the p14.5 protein family with
similarity to Mmf1p" species:4932 "Saccharomyces cerevisiae"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005758
"mitochondrial intermembrane space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] InterPro:IPR006056 SGD:S000000859
Pfam:PF01042 GO:GO:0005829 GO:GO:0005634 GO:GO:0005758
EMBL:BK006939 EMBL:U18813 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
RefSeq:NP_010981.3 GeneID:856788 KEGG:sce:YER060W
RefSeq:NP_010978.3 GeneID:856785 KEGG:sce:YER057C EMBL:AB050475
EMBL:AY558456 PIR:S50560 PDB:1JD1 PDBsum:1JD1
ProteinModelPortal:P40037 SMR:P40037 DIP:DIP-4314N IntAct:P40037
MINT:MINT-555220 STRING:P40037 PaxDb:P40037 PeptideAtlas:P40037
EnsemblFungi:YER057C CYGD:YER057c GeneTree:ENSGT00420000029792
HOGENOM:HOG000267215 OMA:PYNQAVV OrthoDB:EOG483HF3
EvolutionaryTrace:P40037 NextBio:983003 Genevestigator:P40037
GermOnline:YER057C InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 Uniprot:P40037
Length = 129
Score = 190 (71.9 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 131 KFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA 190
K V +I D+ EQV++NI +L+AS + VVK I LAD+ F N +YAKYF +
Sbjct: 43 KLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHK 102
Query: 191 PARATYQVAALPLDARVEIECIAA 214
PAR+ VAALPL +E+E IAA
Sbjct: 103 PARSCVAVAALPLGVDMEMEAIAA 126
Score = 88 (36.0 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
V+ APAA YS A+K NNL+F+SG + + P+
Sbjct: 8 VICESAPAAAASYSHAMKVNNLIFLSGQIPVTPD 41
>RGD|70940 [details] [associations]
symbol:Hrsp12 "heat-responsive protein 12" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005777 "peroxisome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR006056 Pfam:PF01042 RGD:70940
GO:GO:0005739 GO:GO:0005634 GO:GO:0005777 GO:GO:0090305
GO:GO:0004519 Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 CTD:10247 HOVERGEN:HBG003597 OrthoDB:EOG41JZDQ
EMBL:D49363 EMBL:X70825 EMBL:AF015949 EMBL:BC078779 IPI:IPI00231292
PIR:S30349 RefSeq:NP_113902.1 UniGene:Rn.6987 PDB:1QAH PDBsum:1QAH
ProteinModelPortal:P52759 SMR:P52759 STRING:P52759
PhosphoSite:P52759 PRIDE:P52759 GeneID:65151 KEGG:rno:65151
UCSC:RGD:70940 InParanoid:P52759 EvolutionaryTrace:P52759
NextBio:613985 Genevestigator:P52759 GermOnline:ENSRNOG00000005437
Uniprot:P52759
Length = 137
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 59/111 (53%), Positives = 75/111 (67%)
Query: 110 IGTISCRIL---TIYVFES----PFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSV 162
IG S +L TIYV P +G+ V + ++ +Q LKN+GEILKA+G D+++V
Sbjct: 18 IGAYSQAVLVDRTIYVSGQIGMDP-SSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNV 76
Query: 163 VKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
VKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +R+EIE IA
Sbjct: 77 VKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEAIA 127
Score = 97 (39.2 bits), Expect = 0.00050, P = 0.00050
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
S +++ + T+KAPAA+G YSQA+ + ++VSG +G+ P
Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDP 41
>UNIPROTKB|H0YBX3 [details] [associations]
symbol:HRSP12 "Ribonuclease UK114" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005634 GO:GO:0005737
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 HGNC:HGNC:16897 EMBL:AP003439
Ensembl:ENST00000521560 Uniprot:H0YBX3
Length = 127
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 49/73 (67%), Positives = 60/73 (82%)
Query: 141 TEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAA 200
T Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAA
Sbjct: 45 TLQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAA 104
Query: 201 LPLDARVEIECIA 213
LP +R+EIE +A
Sbjct: 105 LPKGSRIEIEAVA 117
>FB|FBgn0086691 [details] [associations]
symbol:UK114 "UK114" species:7227 "Drosophila melanogaster"
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0006457 "protein folding" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0006457 EMBL:AE014134 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 GeneTree:ENSGT00420000029792
OMA:PYNQAVV InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
EMBL:AY119558 RefSeq:NP_609747.1 UniGene:Dm.12046 HSSP:P80601
SMR:Q9V3W0 MINT:MINT-1007857 STRING:Q9V3W0
EnsemblMetazoa:FBtr0080746 EnsemblMetazoa:FBtr0332376 GeneID:34897
KEGG:dme:Dmel_CG15261 UCSC:CG15261-RA CTD:34897 FlyBase:FBgn0086691
InParanoid:Q9V3W0 OrthoDB:EOG4KSN27 GenomeRNAi:34897 NextBio:790777
Uniprot:Q9V3W0
Length = 138
Score = 194 (73.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 39/85 (45%), Positives = 54/85 (63%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
T K V +Q ++ L+N+ +LKA+ + V+K T+ L DL DF VNE+Y + F
Sbjct: 43 TMKLVPGGPTEQAQKALENLEAVLKAADSGVDKVIKNTVFLKDLNDFGAVNEVYKRVFNK 102
Query: 189 PAPARATYQVAALPLDARVEIECIA 213
PAR+ +QVA LP+DA VEIECIA
Sbjct: 103 DFPARSCFQVAKLPMDALVEIECIA 127
Score = 72 (30.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGL 97
+++ + T A + PY+QA+ A+ V+VSG LGL
Sbjct: 5 VRKLISTANAAKPVAPYNQAVVADRTVYVSGCLGL 39
>POMBASE|SPBC2G2.04c [details] [associations]
symbol:mmf1 "YjgF family protein Mmf1" species:4896
"Schizosaccharomyces pombe" [GO:0000002 "mitochondrial genome
maintenance" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR006056 PomBase:SPBC2G2.04c Pfam:PF01042 GO:GO:0005829
GO:GO:0005634 GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0000002 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:T40143 RefSeq:NP_596433.1
ProteinModelPortal:O43003 STRING:O43003 PRIDE:O43003
EnsemblFungi:SPBC2G2.04c.1 GeneID:2540461 KEGG:spo:SPBC2G2.04c
OMA:DQTRQCL OrthoDB:EOG43FM6K NextBio:20801588 Uniprot:O43003
Length = 162
Score = 197 (74.4 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 126 PFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKY 185
P GK + T+ DQT Q L N+ E+L +G+ + +VK I LAD+ DF VN++Y +
Sbjct: 70 PVANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIFLADMDDFAAVNKVYTEV 129
Query: 186 FPSPAPARATYQVAALPLDA---RVEIECIA 213
P P PAR+ V +PL ++EIECIA
Sbjct: 130 LPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
Score = 66 (28.3 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 74 AALGPYSQAIKANNLVFVSG 93
++ GPY+QAIKAN +++ SG
Sbjct: 48 SSAGPYNQAIKANGVIYCSG 67
>ASPGD|ASPL0000015000 [details] [associations]
symbol:AN11062 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:BN001302 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 ProteinModelPortal:C8V7G7
EnsemblFungi:CADANIAT00004297 OMA:QAIKCNG Uniprot:C8V7G7
Length = 128
Score = 178 (67.7 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TGK + ++ T Q +KN+ IL+ +G+D + VVK + LA++ DF +NE Y K++
Sbjct: 41 ETGKIIDGDVKAHTAQCIKNLSAILEEAGSDITKVVKVNVFLANMDDFTAMNEEYMKHWG 100
Query: 188 SPAPARATYQVAALPLDARVEIECIAAL 215
P R V LPL+ VEIEC A L
Sbjct: 101 DVKPVRTCVAVKTLPLNTDVEIECTAHL 128
Score = 83 (34.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 64 KEAVVTNKAPAAL-GPYSQAIKANNLVFVSGVLGLVPE 100
K V+T+KAP L G YSQAIK N +V+ SG + + E
Sbjct: 4 KTPVLTSKAPKPLPGIYSQAIKCNGMVYCSGAVAMDAE 41
>UNIPROTKB|P0AGL2 [details] [associations]
symbol:tdcF "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0042802 "identical
protein binding" evidence=IDA] [GO:0070689 "L-threonine catabolic
process to propionate" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006566 "threonine metabolic process"
evidence=IDA] InterPro:IPR006056 UniPathway:UPA00052 Pfam:PF01042
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016787
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 ProtClustDB:PRK11401 PIR:F65100 RefSeq:NP_417583.4
RefSeq:YP_491302.1 PDB:2UYJ PDB:2UYK PDB:2UYN PDB:2UYP PDBsum:2UYJ
PDBsum:2UYK PDBsum:2UYN PDBsum:2UYP ProteinModelPortal:P0AGL2
SMR:P0AGL2 DIP:DIP-48213N EnsemblBacteria:EBESCT00000001141
EnsemblBacteria:EBESCT00000014312 GeneID:12930270 GeneID:947624
KEGG:ecj:Y75_p3036 KEGG:eco:b3113 PATRIC:32121642 EchoBASE:EB2611
EcoGene:EG12757 BioCyc:EcoCyc:G7626-MONOMER
BioCyc:ECOL316407:JW5521-MONOMER EvolutionaryTrace:P0AGL2
Genevestigator:P0AGL2 Uniprot:P0AGL2
Length = 129
Score = 174 (66.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F
Sbjct: 38 QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFD 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ P R+ QVA LP D ++EIE IA
Sbjct: 97 EHQATYPTRSCVQVARLPKDVKLEIEAIA 125
Score = 86 (35.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+K+ + T +AP A+GPY Q + ++VF SG + + P+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQ 38
>UNIPROTKB|P0AGL3 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:199310 "Escherichia coli CFT073" [GO:0006566 "threonine
metabolic process" evidence=ISS] InterPro:IPR006056
UniPathway:UPA00052 Pfam:PF01042 GO:GO:0016787 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 OMA:PYNQAVV InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 GO:GO:0006566 GO:GO:0070689
KO:K07567 RefSeq:NP_755738.1 ProteinModelPortal:P0AGL3 SMR:P0AGL3
EnsemblBacteria:EBESCT00000041583 GeneID:1040096 KEGG:ecc:c3871
PATRIC:18285526 ProtClustDB:PRK11401 Uniprot:P0AGL3
Length = 129
Score = 174 (66.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F
Sbjct: 38 QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFD 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ P R+ QVA LP D ++EIE IA
Sbjct: 97 EHQATYPTRSCVQVARLPKDVKLEIEAIA 125
Score = 86 (35.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+K+ + T +AP A+GPY Q + ++VF SG + + P+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQ 38
>UNIPROTKB|P0AGL4 [details] [associations]
symbol:tdcF "Putative reactive intermediate deaminase TdcF"
species:623 "Shigella flexneri" [GO:0006566 "threonine metabolic
process" evidence=ISS] InterPro:IPR006056 UniPathway:UPA00052
Pfam:PF01042 EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
GO:GO:0006566 GO:GO:0070689 KO:K07567 ProtClustDB:PRK11401
RefSeq:NP_708917.2 RefSeq:NP_838627.1 ProteinModelPortal:P0AGL4
SMR:P0AGL4 EnsemblBacteria:EBESCT00000085096
EnsemblBacteria:EBESCT00000092667 GeneID:1027187 GeneID:1079601
KEGG:sfl:SF3153 KEGG:sfx:S3365 PATRIC:18708466 Uniprot:P0AGL4
Length = 129
Score = 174 (66.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F
Sbjct: 38 QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFD 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ P R+ QVA LP D ++EIE IA
Sbjct: 97 EHQATYPTRSCVQVARLPKDVKLEIEAIA 125
Score = 86 (35.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+K+ + T +AP A+GPY Q + ++VF SG + + P+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQ 38
>SGD|S000001313 [details] [associations]
symbol:MMF1 "Mitochondrial protein required for
transamination of isoleucine" species:4932 "Saccharomyces
cerevisiae" [GO:0032543 "mitochondrial translation" evidence=IGI]
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0005759 "mitochondrial matrix" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] InterPro:IPR006056 SGD:S000001313 Pfam:PF01042
GO:GO:0005759 EMBL:BK006942 GO:GO:0032543 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 EMBL:Z38060 GO:GO:0009097
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GeneTree:ENSGT00420000029792 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:DQTRQCL
OrthoDB:EOG43FM6K EMBL:AB050474 EMBL:AY558301 PIR:S48428
RefSeq:NP_012213.3 RefSeq:NP_012219.3 PDB:3QUW PDBsum:3QUW
ProteinModelPortal:P40185 SMR:P40185 DIP:DIP-4714N IntAct:P40185
MINT:MINT-487056 STRING:P40185 SWISS-2DPAGE:P40185 PaxDb:P40185
PeptideAtlas:P40185 EnsemblFungi:YIL051C GeneID:854760
GeneID:854766 KEGG:sce:YIL045W KEGG:sce:YIL051C CYGD:YIL051c
NextBio:977502 Genevestigator:P40185 GermOnline:YIL051C
Uniprot:P40185
Length = 145
Score = 173 (66.0 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 38/100 (38%), Positives = 60/100 (60%)
Query: 120 IYVF-ESPFQT-GKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKT 177
+YV + P+ K V +I ++ EQV +N+ IL S + ++VK + LAD+K+F
Sbjct: 46 VYVSGQIPYTPDNKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAE 105
Query: 178 VNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 217
N +YAK+F + PAR+ VA+LPL+ +E+E IA N
Sbjct: 106 FNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAVEKN 145
Score = 86 (35.3 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
V T AP A YSQA+KANN V+VSG + P+
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPD 57
>POMBASE|SPAC1039.10 [details] [associations]
symbol:mmf2 "homologous Pmf1 factor 1, implicated in
isoleucine biosynthesis (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009097 "isoleucine biosynthetic process" evidence=ISO]
InterPro:IPR006056 Pfam:PF01042 PomBase:SPAC1039.10 GO:GO:0005739
GO:GO:0005634 GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
PIR:T50060 RefSeq:NP_595001.1 ProteinModelPortal:Q9UR06
STRING:Q9UR06 EnsemblFungi:SPAC1039.10.1 GeneID:2543017
KEGG:spo:SPAC1039.10 OMA:SIIHAER OrthoDB:EOG4FJCKC NextBio:20804048
Uniprot:Q9UR06
Length = 126
Score = 197 (74.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 36/94 (38%), Positives = 57/94 (60%)
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
++ + G FV TI++QT ++N+ E+L+ +G+ +VK I L D+ DF +NE+Y
Sbjct: 32 QAAVKDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIFLTDIDDFAAMNEVYK 91
Query: 184 KYFPSPAPARATYQVAALPLDAR---VEIECIAA 214
+ P P PAR T +PL ++ +EIECIAA
Sbjct: 92 EMLPDPMPARTTVAAGKIPLSSKGGKIEIECIAA 125
Score = 61 (26.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 77 GPYSQAIKANNLVFVSG 93
GPY+QA+K+ L+F SG
Sbjct: 15 GPYNQAVKSGGLIFCSG 31
>UNIPROTKB|G4MY05 [details] [associations]
symbol:MGG_10440 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] InterPro:IPR006056 Pfam:PF01042 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CM001232 InterPro:IPR006175 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 RefSeq:XP_003713340.1 ProteinModelPortal:G4MY05
EnsemblFungi:MGG_10440T0 GeneID:2682073 KEGG:mgr:MGG_10440
Uniprot:G4MY05
Length = 128
Score = 158 (60.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 131 KFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA 190
+ + I+ T Q +KN+ IL+ +G+ VVK + L+++ DF +NEIY +Y+
Sbjct: 44 QIIDGDIQAHTHQCIKNLTAILEEAGSSIEKVVKVNVFLSNMDDFAAMNEIYMQYWGEVK 103
Query: 191 PARATYQVAALPLDARVEIECIA 213
P R V LPL+ VEIEC A
Sbjct: 104 PCRTCVAVKTLPLNVDVEIECTA 126
Score = 99 (39.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 64 KEAVVTNKAPAAL-GPYSQAIKANNLVFVSGVLGLVP 99
K AV+T+KAP L G YSQAIKAN VFVSG + + P
Sbjct: 4 KTAVLTDKAPKPLPGIYSQAIKANGFVFVSGAVPMDP 40
>TIGR_CMR|SO_1404 [details] [associations]
symbol:SO_1404 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:SIIHAER
KO:K07567 RefSeq:NP_717024.2 HSSP:P40037 ProteinModelPortal:Q8EH27
GeneID:1169223 KEGG:son:SO_1404 PATRIC:23522460
ProtClustDB:CLSK906245 Uniprot:Q8EH27
Length = 127
Score = 174 (66.3 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 130 GKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP 189
G V I +Q+ Q L+N+ +L+A G +V+KTT L+++ DF NE+Y YF +
Sbjct: 40 GGVVDGGISEQSVQCLENLKYVLEAGGGSLDTVLKTTCYLSEISDFAAFNEVYKTYFKTD 99
Query: 190 APARATYQVAALPLDARVEIECIA 213
PAR+ + V LPL +VEIE IA
Sbjct: 100 CPARSCFAVKDLPLGVKVEIEAIA 123
Score = 79 (32.9 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVL 95
+K + +AP A+GPYS + NL+F SG L
Sbjct: 1 MKSIIHAERAPTAIGPYSHGTRYGNLIFTSGQL 33
>UNIPROTKB|P0AF93 [details] [associations]
symbol:ridA "predicted enamine/imine deaminase"
species:83333 "Escherichia coli K-12" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0009097 "isoleucine biosynthetic process"
evidence=IEA] [GO:0009082 "branched-chain amino acid biosynthetic
process" evidence=IEA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019239 "deaminase activity" evidence=ISO;ISS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0016020 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009636
GO:GO:0016787 GO:GO:0019239 EMBL:U14003 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:AGNTIYL
KO:K09022 RefSeq:NP_418664.2 RefSeq:YP_492383.1 PDB:1QU9
PDBsum:1QU9 ProteinModelPortal:P0AF93 SMR:P0AF93 DIP:DIP-36232N
SWISS-2DPAGE:P0AF93 PaxDb:P0AF93 PRIDE:P0AF93
EnsemblBacteria:EBESCT00000002907 EnsemblBacteria:EBESCT00000016129
GeneID:12933726 GeneID:948771 KEGG:ecj:Y75_p4128 KEGG:eco:b4243
PATRIC:32124063 EchoBASE:EB2415 EcoGene:EG12524
ProtClustDB:CLSK950280 BioCyc:EcoCyc:G7877-MONOMER
BioCyc:ECOL316407:JW5755-MONOMER EvolutionaryTrace:P0AF93
Genevestigator:P0AF93 Uniprot:P0AF93
Length = 128
Score = 162 (62.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 36/89 (40%), Positives = 53/89 (59%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F
Sbjct: 38 KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFT 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ PAR+ +VA LP D ++EIE IA
Sbjct: 97 EHNATFPARSCVEVARLPKDVKIEIEAIA 125
Score = 81 (33.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+ + + T APAA+GPY Q + N++ SG + + P+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPK 38
>UNIPROTKB|P0AF94 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:199310
"Escherichia coli CFT073" [GO:0019239 "deaminase activity"
evidence=ISS] InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737
GO:GO:0009636 GO:GO:0016787 GO:GO:0019239 EMBL:AE014075
GenomeReviews:AE014075_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:AGNTIYL RefSeq:NP_757189.1
ProteinModelPortal:P0AF94 SMR:P0AF94
EnsemblBacteria:EBESCT00000042525 GeneID:1037367 KEGG:ecc:c5342
PATRIC:18288330 KO:K09022 ProtClustDB:CLSK556760 Uniprot:P0AF94
Length = 128
Score = 162 (62.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 36/89 (40%), Positives = 53/89 (59%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F
Sbjct: 38 KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFT 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ PAR+ +VA LP D ++EIE IA
Sbjct: 97 EHNATFPARSCVEVARLPKDVKIEIEAIA 125
Score = 81 (33.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+ + + T APAA+GPY Q + N++ SG + + P+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPK 38
>UNIPROTKB|P0AF95 [details] [associations]
symbol:yjgF "Enamine/imine deaminase" species:623 "Shigella
flexneri" [GO:0019239 "deaminase activity" evidence=ISS]
InterPro:IPR006056 Pfam:PF01042 GO:GO:0005737 GO:GO:0009636
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K09022 ProtClustDB:CLSK556760
RefSeq:NP_709958.2 RefSeq:NP_839641.1 ProteinModelPortal:P0AF95
SMR:P0AF95 EnsemblBacteria:EBESCT00000085520
EnsemblBacteria:EBESCT00000090787 GeneID:1026589 GeneID:1080714
KEGG:sfl:SF4247 KEGG:sfx:S4509 PATRIC:18711038 Uniprot:P0AF95
Length = 128
Score = 162 (62.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 36/89 (40%), Positives = 53/89 (59%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F
Sbjct: 38 KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFT 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ PAR+ +VA LP D ++EIE IA
Sbjct: 97 EHNATFPARSCVEVARLPKDVKIEIEAIA 125
Score = 81 (33.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+ + + T APAA+GPY Q + N++ SG + + P+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPK 38
>UNIPROTKB|Q7CP78 [details] [associations]
symbol:ridA "Enamine/imine deaminase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0009097 "isoleucine biosynthetic process" evidence=IMP]
[GO:0019239 "deaminase activity" evidence=IDA] InterPro:IPR006056
Pfam:PF01042 GO:GO:0005737 GO:GO:0009636 EMBL:AE006468
GenomeReviews:AE006468_GR GO:GO:0016787 GO:GO:0019239
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
GO:GO:0009097 InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 EMBL:AF095578
RefSeq:NP_463318.1 ProteinModelPortal:Q7CP78 SMR:Q7CP78
PRIDE:Q7CP78 GeneID:1255984 KEGG:stm:STM4458 PATRIC:32387855
OMA:SQAVKIC ProtClustDB:CLSK894630 Uniprot:Q7CP78
Length = 128
Score = 165 (63.1 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+TG V++ + Q Q L+N+ I++A+G +VKTT+ + DL DF TVN Y +F
Sbjct: 38 KTGA-VAEDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFT 96
Query: 188 ---SPAPARATYQVAALPLDARVEIECIA 213
+ PAR+ +VA LP D ++EIE IA
Sbjct: 97 EHNATFPARSCVEVARLPKDVKIEIEAIA 125
Score = 77 (32.2 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+ + + T APAA+GPY Q + ++V SG + + P+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDPK 38
>TIGR_CMR|DET_1052 [details] [associations]
symbol:DET_1052 "endoribonuclease L-PSP, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 OMA:QAIKCNG
RefSeq:YP_181767.1 ProteinModelPortal:Q3Z7N2 STRING:Q3Z7N2
GeneID:3229647 KEGG:det:DET1052 PATRIC:21609149
ProtClustDB:CLSK837122 BioCyc:DETH243164:GJNF-1053-MONOMER
Uniprot:Q3Z7N2
Length = 125
Score = 164 (62.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 137 IEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATY 196
+E QT++ L+ + E+LK +GA + VVKTT+ L +DF +N +Y +F +P PAR+T
Sbjct: 44 VEAQTKRCLEKMAELLKEAGASFDDVVKTTVFLKSQEDFAKMNSVYTTFFSAPKPARSTV 103
Query: 197 QVAALPLDARVEIECIAALP 216
+ + VEIE +A LP
Sbjct: 104 IAGMVFPEIVVEIEAVAYLP 123
Score = 71 (30.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 72 APAALGPYSQAIKANNLVFVSGVLG 96
AP A GPYS A++A + +++SG +G
Sbjct: 8 APGAQGPYSLAVRAGDYLYISGQIG 32
>UNIPROTKB|Q9KP64 [details] [associations]
symbol:VC_2512 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006056 Pfam:PF01042 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022
HSSP:P39330 PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64
SMR:Q9KP64 DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512
PATRIC:20084053 OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 159 (61.0 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
TG+ +D I Q Q L N+ +++ASG +VK T+ + DL DF TVN++Y +F
Sbjct: 39 TGEIPAD-IAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDE 97
Query: 189 PA----PARATYQVAALPLDARVEIECIA 213
PAR+ +VA LP D +EIE IA
Sbjct: 98 HKVAHYPARSCVEVARLPKDVGIEIEAIA 126
Score = 75 (31.5 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
T+ APAA+GPY Q + N+V SG + + P
Sbjct: 7 TDAAPAAIGPYIQGVDLGNMVLTSGQIPVNP 37
>TIGR_CMR|VC_2512 [details] [associations]
symbol:VC_2512 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR006056
Pfam:PF01042 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K09022 HSSP:P39330
PIR:B82067 RefSeq:NP_232141.1 ProteinModelPortal:Q9KP64 SMR:Q9KP64
DNASU:2615176 GeneID:2615176 KEGG:vch:VC2512 PATRIC:20084053
OMA:DEHNVAH ProtClustDB:CLSK874822 Uniprot:Q9KP64
Length = 129
Score = 159 (61.0 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPS 188
TG+ +D I Q Q L N+ +++ASG +VK T+ + DL DF TVN++Y +F
Sbjct: 39 TGEIPAD-IAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNQVYGAFFDE 97
Query: 189 PA----PARATYQVAALPLDARVEIECIA 213
PAR+ +VA LP D +EIE IA
Sbjct: 98 HKVAHYPARSCVEVARLPKDVGIEIEAIA 126
Score = 75 (31.5 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
T+ APAA+GPY Q + N+V SG + + P
Sbjct: 7 TDAAPAAIGPYIQGVDLGNMVLTSGQIPVNP 37
>TIGR_CMR|BA_0046 [details] [associations]
symbol:BA_0046 "putative endoribonuclease L-PSP"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:AGNTIYL ProtClustDB:CLSK872604 HSSP:P37552 RefSeq:NP_842615.1
RefSeq:YP_016649.1 RefSeq:YP_026333.1 ProteinModelPortal:Q81VZ3
SMR:Q81VZ3 DNASU:1086283 EnsemblBacteria:EBBACT00000011279
EnsemblBacteria:EBBACT00000017967 EnsemblBacteria:EBBACT00000019901
GeneID:1086283 GeneID:2819036 GeneID:2848704 KEGG:ban:BA_0046
KEGG:bar:GBAA_0046 KEGG:bat:BAS0046
BioCyc:BANT260799:GJAJ-53-MONOMER BioCyc:BANT261594:GJ7F-55-MONOMER
Uniprot:Q81VZ3
Length = 124
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 48/109 (44%), Positives = 66/109 (60%)
Query: 110 IGTISCRILTIYVFESPFQ-----TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVK 164
IG S I+ +F S Q +G+ V+ + QTEQV +N+ +L+ +GA + +VVK
Sbjct: 13 IGPYSQGIIVNNMFYSSGQIPLTASGELVAGDVTVQTEQVFQNLQAVLEEAGASFDTVVK 72
Query: 165 TTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
TT+ L D+ DF VNE+Y YF + PAR+ QVA LP D VEIE IA
Sbjct: 73 TTVFLKDMDDFNAVNEVYGSYFSAHKPARSCVQVAKLPKDVSVEIEVIA 121
>UNIPROTKB|P37552 [details] [associations]
symbol:yabJ "Enamine/imine deaminase" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0019239 "deaminase
activity" evidence=IDA] InterPro:IPR006056 Pfam:PF01042
GO:GO:0005737 GO:GO:0009636 GO:GO:0016787 GO:GO:0019239
EMBL:AL009126 GenomeReviews:AL009126_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0009097 EMBL:D26185
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 PIR:S66077 RefSeq:NP_387929.1 PDB:1QD9
PDBsum:1QD9 ProteinModelPortal:P37552 SMR:P37552
EnsemblBacteria:EBBACT00000003065 GeneID:936988 KEGG:bsu:BSU00480
PATRIC:18971567 GenoList:BSU00480 KO:K07567 OMA:AGNTIYL
ProtClustDB:CLSK872604 BioCyc:BSUB:BSU00480-MONOMER
EvolutionaryTrace:P37552 Uniprot:P37552
Length = 125
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 46/109 (42%), Positives = 68/109 (62%)
Query: 110 IGTISCRILTIYVFESPFQ-----TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVK 164
IG S I+ +F S Q +G+ V+ I++QT QV N+ +L+ +GA + +VVK
Sbjct: 14 IGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVK 73
Query: 165 TTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
T+ +AD++ F VNE+Y +YF + PAR+ +VA LP DA VEIE IA
Sbjct: 74 ATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIA 122
Score = 95 (38.5 bits), Expect = 0.00017, P = 0.00017
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVP 99
+ +AV T APAA+GPYSQ I NN+ + SG + L P
Sbjct: 1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP 37
>ASPGD|ASPL0000035043 [details] [associations]
symbol:AN9080 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006056 Pfam:PF01042
EMBL:BN001306 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 OMA:SQAVKIC ProteinModelPortal:C8VH67
EnsemblFungi:CADANIAT00009535 Uniprot:C8VH67
Length = 161
Score = 132 (51.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
+ G V I +T+ NI IL A+G+ +++ + L D+ +F +N Y K+F
Sbjct: 75 KNGNLVEGDIRTKTQACCDNIKAILDAAGSSVDKIIRVNVFLDDMSNFAEMNAQYEKFF- 133
Query: 188 SPAPARATYQVAALPLDARVEIECIA 213
+ PAR+ LP VEIECIA
Sbjct: 134 THKPARSCIAAKQLPKGVPVEIECIA 159
Score = 89 (36.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 19 LRTRSRLAAVGIGCASVAGSSVWRSSCKKHSTPFACLSTSAVSNLKEAVVTNKAPAALGP 78
LR RL V S+ S+ + PF T+A+S+L N P +GP
Sbjct: 2 LRASFRLVTVS---HSLLSPSIRPRISPRVRLPF---QTAAMSDLTNIFTPNACPP-VGP 54
Query: 79 YSQAIKANNLVFVSG 93
YSQA+KAN +F+SG
Sbjct: 55 YSQAVKANGQIFLSG 69
>TIGR_CMR|CPS_4974 [details] [associations]
symbol:CPS_4974 "putative endoribonuclease L-PSP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
HOGENOM:HOG000267215 InterPro:IPR019897 PANTHER:PTHR11803
TIGRFAMs:TIGR00004 KO:K07567 RefSeq:YP_271613.1
ProteinModelPortal:Q47UB0 STRING:Q47UB0 GeneID:3521216
KEGG:cps:CPS_4974 PATRIC:21472741 OMA:ENHIYIS
BioCyc:CPSY167879:GI48-4975-MONOMER Uniprot:Q47UB0
Length = 129
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 40/102 (39%), Positives = 61/102 (59%)
Query: 119 TIYVF-ESPF--QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDF 175
T+Y+ + P +T + +Q EQV KN+ + +A+G D + +VK I L DL +F
Sbjct: 26 TVYLSGQIPLVAETMTVIEGGFAEQAEQVFKNLVAVCEAAGGDINDMVKVNIFLTDLSNF 85
Query: 176 KTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 217
TVN+I ++YF P PARA QV+ LP D +EI+ + LP+
Sbjct: 86 VTVNDIMSRYFSQPYPARAAIQVSKLPKDVDIEIDGVMELPS 127
Score = 117 (46.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYV 104
+K + T+KAP+A+GPYSQA+K NN V++SG + LV E V
Sbjct: 1 MKSIISTDKAPSAIGPYSQAVKVNNTVYLSGQIPLVAETMTV 42
>ASPGD|ASPL0000028527 [details] [associations]
symbol:AN5543 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01042 EMBL:BN001305 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 EMBL:AACD01000095 HOGENOM:HOG000267215
PANTHER:PTHR11803 OrthoDB:EOG4FJCKC RefSeq:XP_663147.1
ProteinModelPortal:Q5B1N7 EnsemblFungi:CADANIAT00003539
GeneID:2871833 KEGG:ani:AN5543.2 OMA:EIECIAQ Uniprot:Q5B1N7
Length = 116
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
F G+ + I+ T VL+NI E+L+ SG+ VVK + LAD+KDF +NE+Y ++
Sbjct: 28 FLAGQTATGEIKQATRTVLQNIKEVLELSGSSLEQVVKYNVYLADMKDFAAMNEVYIEFL 87
Query: 187 PSPAPARATYQVAALPLDARV-EIECIA 213
P P P+R+ Q A P + V EIECIA
Sbjct: 88 PKPMPSRSCLQ-ALPPGEGTVIEIECIA 114
>UNIPROTKB|G4N2M8 [details] [associations]
symbol:MGG_07621 "Endoribonuclease L-PSP" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0044271 "cellular nitrogen compound biosynthetic process"
evidence=IEP] Pfam:PF01042 EMBL:CM001233 GO:GO:0044271
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 RefSeq:XP_003711544.1
ProteinModelPortal:G4N2M8 EnsemblFungi:MGG_07621T0 GeneID:2683541
KEGG:mgr:MGG_07621 Uniprot:G4N2M8
Length = 147
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 111 GTISCRILTIYVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLA 170
G + R L +P G + + I QT V+ NI +LK +G + +KTT+ LA
Sbjct: 41 GGVMTRDLVYTSGTTPSINGT-IPEGISAQTANVINNIAAVLKEAGTSWEYALKTTVFLA 99
Query: 171 DLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAALPN 217
++ D+ +N +Y + P+P PAR T Q LP + VEIE + A P+
Sbjct: 100 NMDDYAAMNAVYGELLPNPKPARTTIQAGKLPGNFLVEIEAVVARPH 146
>TIGR_CMR|SO_0358 [details] [associations]
symbol:SO_0358 "endoribonuclease L-PSP, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] InterPro:IPR006056 Pfam:PF01042
GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004 KO:K07567
OMA:VEMDGIM HSSP:P44839 RefSeq:NP_715998.1
ProteinModelPortal:Q8EJU9 GeneID:1168235 KEGG:son:SO_0358
PATRIC:23520421 ProtClustDB:CLSK905712 Uniprot:Q8EJU9
Length = 127
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 43/112 (38%), Positives = 61/112 (54%)
Query: 110 IGTISCRIL---TIYVF-ESPF--QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVV 163
IGT S + T+Y+ + P T + VSD E Q QV +N+ + A+G + +V
Sbjct: 16 IGTYSQAVKVGNTVYLSGQIPLVPSTMQIVSDDFEAQVVQVFENLTAVCTAAGGTINDIV 75
Query: 164 KTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAAL 215
K I L DL F VNEI ++YF P PARA V LP D++VE++ + L
Sbjct: 76 KLNIFLTDLSHFAKVNEIMSRYFSQPYPARAAIGVKQLPKDSQVEMDGVMEL 127
Score = 100 (40.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYV 104
K + T APAA+G YSQA+K N V++SG + LVP +
Sbjct: 4 KIIIATENAPAAIGTYSQAVKVGNTVYLSGQIPLVPSTMQI 44
>TIGR_CMR|CBU_0304 [details] [associations]
symbol:CBU_0304 "endoribonuclease L-PSP, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004521
"endoribonuclease activity" evidence=ISS] InterPro:IPR006056
Pfam:PF01042 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PROSITE:PS01094 HOGENOM:HOG000267215
InterPro:IPR019897 PANTHER:PTHR11803 TIGRFAMs:TIGR00004
RefSeq:NP_819347.2 ProteinModelPortal:Q83EL5 PRIDE:Q83EL5
GeneID:1208186 KEGG:cbu:CBU_0304 PATRIC:17929303 OMA:MDGVMEI
ProtClustDB:CLSK913971 BioCyc:CBUR227377:GJ7S-311-MONOMER
Uniprot:Q83EL5
Length = 148
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 110 IGTISCRIL---TIYVF-ESPFQ--TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVV 163
IGT S + T+Y + P + T + +S +D +V KNI I +A+G + +V
Sbjct: 35 IGTYSQAVKAGNTVYFSGQIPLEPETMEIISGDFKDHVHRVFKNIAAIAEAAGGSLAQIV 94
Query: 164 KTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAAL 215
K TI L D+++F VNE+ Y+ P PARA V LP +A +EI+ + L
Sbjct: 95 KLTIYLTDMENFHLVNEVMKHYYEEPYPARAVIAVKQLPKNALIEIDAVMVL 146
Score = 110 (43.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPE 100
+K+ + TNKAP A+G YSQA+KA N V+ SG + L PE
Sbjct: 22 MKQIIGTNKAPRAIGTYSQAVKAGNTVYFSGQIPLEPE 59
>TIGR_CMR|SPO_2709 [details] [associations]
symbol:SPO_2709 "endoribonuclease L-PSP, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 RefSeq:YP_167919.1 ProteinModelPortal:Q5LPY7
GeneID:3194321 KEGG:sil:SPO2709 PATRIC:23378833 OMA:IMVEIEA
Uniprot:Q5LPY7
Length = 134
Score = 133 (51.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 126 PFQTG-KFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAK 184
P + G + ++E+QT VL +I L +G VVK + L DF N +Y +
Sbjct: 39 PMRDGVPITTGSVEEQTRAVLDDITATLALAGCTRDDVVKAMVWLRARSDFPGFNAVYGE 98
Query: 185 YFPSPAPARATYQVAALPLDARVEIECIAALP 216
YFP P R+ V+ L +D RVE+E +A P
Sbjct: 99 YFPHDPPTRSAV-VSDLLVDVRVEVEVMAYKP 129
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 7/14 (50%), Positives = 12/14 (85%)
Query: 80 SQAIKANNLVFVSG 93
S+AI+A + VF++G
Sbjct: 23 SRAIRAGDFVFLTG 36
>UNIPROTKB|P0AFQ5 [details] [associations]
symbol:rutC "predicted aminoacrylate peracid reductase"
species:83333 "Escherichia coli K-12" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006212 "uracil
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=IMP] [GO:0019740 "nitrogen utilization"
evidence=IMP] HAMAP:MF_00831 Pfam:PF01042 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016491
GO:GO:0019740 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
GO:GO:0006212 HOGENOM:HOG000267215 InterPro:IPR019897
PANTHER:PTHR11803 PIR:H64842 RefSeq:NP_415530.1 RefSeq:YP_489283.1
ProteinModelPortal:P0AFQ5 SMR:P0AFQ5 IntAct:P0AFQ5
EnsemblBacteria:EBESCT00000002580 EnsemblBacteria:EBESCT00000015649
GeneID:12931042 GeneID:945599 KEGG:ecj:Y75_p0983 KEGG:eco:b1010
PATRIC:32117249 EchoBASE:EB3617 EcoGene:EG13857 KO:K09021
OMA:TIITPPG ProtClustDB:CLSK879923 BioCyc:EcoCyc:G6521-MONOMER
BioCyc:ECOL316407:JW0995-MONOMER Genevestigator:P0AFQ5
InterPro:IPR019898 TIGRFAMs:TIGR03610 Uniprot:P0AFQ5
Length = 128
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 97 LVPEVCYVSLLSFI-GTISCRILTIYVFES-PFQTGKFV--SDTIEDQTEQVLKNIGEIL 152
++P L F+ GT++ + +YV + F V +D + QT VL+ I +++
Sbjct: 6 IIPAGSSAPLAPFVPGTLADGV--VYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVI 63
Query: 153 KASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 212
+ +G + V +I + D K++ +NEIYA++FP PAR Q + DA VEI I
Sbjct: 64 ETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATI 123
Query: 213 A 213
A
Sbjct: 124 A 124
>UNIPROTKB|Q0BZ17 [details] [associations]
symbol:HNE_2586 "Amidohydrolase family/endoribonuclease
L-PSP" species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011059 Pfam:PF01042 SUPFAM:SSF51338
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0016810
eggNOG:COG0251 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:YP_761276.1 ProteinModelPortal:Q0BZ17 STRING:Q0BZ17
GeneID:4288554 KEGG:hne:HNE_2586 PATRIC:32218029
HOGENOM:HOG000288353 OMA:VEVECMA ProtClustDB:CLSK839674
BioCyc:HNEP228405:GI69-2604-MONOMER Uniprot:Q0BZ17
Length = 755
Score = 144 (55.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 134 SDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA-PA 192
S D +V+ ++ ++ ++GAD + K T++L D+ ++ NE+YA YF PA
Sbjct: 670 SSDFRDHAVEVMDSVRQVAASAGADMDQIFKCTVMLEDMSNWPAFNEVYAGYFTKGRMPA 729
Query: 193 RATYQVAALPLDARVEIECIAALPN 217
R+ + L L A VE+EC+A N
Sbjct: 730 RSAFGADGLALGASVEVECMAYAEN 754
Score = 52 (23.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 7/19 (36%), Positives = 15/19 (78%)
Query: 78 PYSQAIKANNLVFVSGVLG 96
P+S A++ N++++SG +G
Sbjct: 645 PFSGAVRVGNIIYLSGQIG 663
>TIGR_CMR|SPO_2000 [details] [associations]
symbol:SPO_2000 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 RefSeq:YP_167234.1 ProteinModelPortal:Q5LRX1
GeneID:3193577 KEGG:sil:SPO2000 PATRIC:23377331 OMA:KILMANI
ProtClustDB:CLSK751568 Uniprot:Q5LRX1
Length = 117
Score = 122 (48.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 136 TIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP-APARA 194
++ QT+ L I +L +G+D + +++TTI LAD+ DF +N ++ + P+ APARA
Sbjct: 35 SVAQQTQDCLNQIDALLSEAGSDRTRILQTTIWLADMADFAEMNAVWDSWVPAGHAPARA 94
Query: 195 TYQVAALPLDARVEIECIAA 214
+ D RVE AA
Sbjct: 95 CGEARLATPDYRVEFIVTAA 114
>TIGR_CMR|CPS_2046 [details] [associations]
symbol:CPS_2046 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_268774.1 ProteinModelPortal:Q483J2 STRING:Q483J2
GeneID:3518721 KEGG:cps:CPS_2046 PATRIC:21467215 OMA:EWLVEID
ProtClustDB:CLSK869315 BioCyc:CPSY167879:GI48-2116-MONOMER
Uniprot:Q483J2
Length = 136
Score = 98 (39.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 139 DQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQV 198
+Q +Q +KN+ ++L+ +G++ S VVKTT + D + + V + K+F P +
Sbjct: 57 EQAKQAMKNVKQLLEEAGSELSHVVKTTTYITDPRYREPVYQEVGKWFKGVYPISTGLVI 116
Query: 199 AALPL-DARVEIECIAALP 216
+ L + +EI+ IA +P
Sbjct: 117 SGLAQPEWLMEIDVIAVIP 135
Score = 47 (21.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 81 QAIKANNLVFVSGVLG 96
QA+KA N ++V G +G
Sbjct: 27 QAVKAGNTIYVRGQIG 42
>UNIPROTKB|G4N4Y7 [details] [associations]
symbol:MGG_16750 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:CM001233 Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
RefSeq:XP_003711906.1 ProteinModelPortal:G4N4Y7
EnsemblFungi:MGG_16750T0 GeneID:12984246 KEGG:mgr:MGG_16750
Uniprot:G4N4Y7
Length = 137
Score = 98 (39.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
+ TG+ + + Q EQ +NI L +GA VV+ +L + DF + ++ ++
Sbjct: 39 YSTGEIAAGDVAAQAEQTFRNIASALGEAGAGMRDVVRVRYILPNRTDFPKIWDVTKRWL 98
Query: 187 PSPAPARATYQVAALPLDARVEIECIAALPNA 218
PA Q + VEIE A + A
Sbjct: 99 GDVRPAATMVQAGLMEEAMLVEIEVTARIGGA 130
Score = 47 (21.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 70 NKAPAALGPYSQAIKANNLVFVSGVLG 96
+K + +G YS+A+ + + VFVSG G
Sbjct: 11 SKFESQIG-YSRAVVSGDWVFVSGCTG 36
>UNIPROTKB|P0AEB7 [details] [associations]
symbol:yoaB "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0042710 "biofilm formation" evidence=IMP]
Pfam:PF01042 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 eggNOG:COG0251 InterPro:IPR006175 PROSITE:PS01094
InterPro:IPR019897 PANTHER:PTHR11803 PIR:A64942 RefSeq:NP_416323.4
RefSeq:YP_490070.1 ProteinModelPortal:P0AEB7 SMR:P0AEB7
DIP:DIP-47897N EnsemblBacteria:EBESCT00000002696
EnsemblBacteria:EBESCT00000018006 GeneID:12931348 GeneID:946357
KEGG:ecj:Y75_p1784 KEGG:eco:b1809 PATRIC:32118935 EchoBASE:EB3287
EcoGene:EG13514 HOGENOM:HOG000267214 OMA:DVTIFLA
ProtClustDB:CLSK880215 BioCyc:EcoCyc:G6993-MONOMER
BioCyc:ECOL316407:JW5295-MONOMER Genevestigator:P0AEB7
Uniprot:P0AEB7
Length = 114
Score = 114 (45.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 134 SDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY-AKYFPSPAPA 192
+D E QT L I +L+ G++ SS++ TI LAD DF +N+ + A AP
Sbjct: 33 ADAFE-QTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPV 91
Query: 193 RATYQVAALPLDARVEIECIAAL 215
R T Q + +VEI+ +AA+
Sbjct: 92 RCTVQAGLMNPKYKVEIKIVAAV 114
>UNIPROTKB|Q8EJW9 [details] [associations]
symbol:SO_0337 "YER057c/Yigf/Uk114 family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 114 (45.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/92 (29%), Positives = 46/92 (50%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
Q K I +QT +L+ + +L +G+ ++ T+ L D+ D+ +N ++ + P
Sbjct: 27 QVAKDKYQNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKDMNDYDAMNAVWDAWVP 86
Query: 188 SP-APARATYQVAALPLDARVEIECIAALPNA 218
APARA Q A + VE+ IAA+ A
Sbjct: 87 KGHAPARACVQAAIAEPEYLVEVSVIAAVAKA 118
>TIGR_CMR|SO_0337 [details] [associations]
symbol:SO_0337 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF01042 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 HOGENOM:HOG000267214
OMA:CGQVCKD HSSP:P37552 RefSeq:NP_715977.1
ProteinModelPortal:Q8EJW9 GeneID:1168214 KEGG:son:SO_0337
PATRIC:23520377 ProtClustDB:CLSK905703 Uniprot:Q8EJW9
Length = 118
Score = 114 (45.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/92 (29%), Positives = 46/92 (50%)
Query: 128 QTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP 187
Q K I +QT +L+ + +L +G+ ++ T+ L D+ D+ +N ++ + P
Sbjct: 27 QVAKDKYQNITEQTTTMLEEVDALLAQAGSSREHLLSATLYLKDMNDYDAMNAVWDAWVP 86
Query: 188 SP-APARATYQVAALPLDARVEIECIAALPNA 218
APARA Q A + VE+ IAA+ A
Sbjct: 87 KGHAPARACVQAAIAEPEYLVEVSVIAAVAKA 118
>UNIPROTKB|Q9KRT0 [details] [associations]
symbol:VC1556 "Putative uncharacterized protein VC1556"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01042 GenomeReviews:AE003852_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 PANTHER:PTHR11803 EMBL:AE004233 PIR:F82185
RefSeq:NP_231196.1 ProteinModelPortal:Q9KRT0 DNASU:2613935
GeneID:2613935 KEGG:vch:VC1556 PATRIC:20082173 OMA:LVEIAFV
ProtClustDB:CLSK874428 Uniprot:Q9KRT0
Length = 120
Score = 111 (44.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 134 SDTIED---QTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP- 189
SDT D Q EQVL L G+D S ++ TI + D D +N+I+ +FP
Sbjct: 30 SDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFADLPVLNQIWDAWFPEGC 89
Query: 190 APARATYQVAALPLDARVEIECIAA 214
AP+RA + D +VE+ +AA
Sbjct: 90 APSRACVKAELADPDYKVEMAFVAA 114
>TIGR_CMR|VC_1556 [details] [associations]
symbol:VC_1556 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF01042
GenomeReviews:AE003852_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803 EMBL:AE004233
PIR:F82185 RefSeq:NP_231196.1 ProteinModelPortal:Q9KRT0
DNASU:2613935 GeneID:2613935 KEGG:vch:VC1556 PATRIC:20082173
OMA:LVEIAFV ProtClustDB:CLSK874428 Uniprot:Q9KRT0
Length = 120
Score = 111 (44.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 134 SDTIED---QTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP- 189
SDT D Q EQVL L G+D S ++ TI + D D +N+I+ +FP
Sbjct: 30 SDTSADMQGQVEQVLAQAERQLAKIGSDRSRILSVTIYVTDFADLPVLNQIWDAWFPEGC 89
Query: 190 APARATYQVAALPLDARVEIECIAA 214
AP+RA + D +VE+ +AA
Sbjct: 90 APSRACVKAELADPDYKVEMAFVAA 114
>TIGR_CMR|CPS_3858 [details] [associations]
symbol:CPS_3858 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:YP_270520.1 ProteinModelPortal:Q47XF0 STRING:Q47XF0
GeneID:3522803 KEGG:cps:CPS_3858 PATRIC:21470621 OMA:PYPNRAA
ProtClustDB:CLSK909028 BioCyc:CPSY167879:GI48-3875-MONOMER
Uniprot:Q47XF0
Length = 125
Score = 109 (43.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 119 TIYVFESPFQT-GKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKT 177
T+ + P G+ V IE Q Q ++N ++A+ V + I +
Sbjct: 25 TLSTAQIPINAEGQVVEGGIEAQARQTMENFKHTIEAANLTMDDVTQVLIYVTARDQLPV 84
Query: 178 VNEIYAKYFPSPAPARATYQVAALPLDARV-EIECIAALP 216
N++YA+YF +P P RA VA L + + E+ AA+P
Sbjct: 85 FNKVYAEYFQAPYPNRAAMIVAGLAREEMLCEVVAYAAVP 124
>UNIPROTKB|O07205 [details] [associations]
symbol:MT2777.1 "Conserved protein" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] Pfam:PF01042 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
EMBL:AL123456 PIR:C70531 RefSeq:NP_217220.1 RefSeq:NP_337279.1
RefSeq:YP_006516148.1 PDB:3I7T PDBsum:3I7T SMR:O07205
EnsemblBacteria:EBMYCT00000003108 EnsemblBacteria:EBMYCT00000070986
GeneID:13319431 GeneID:887675 GeneID:925520 KEGG:mtc:MT2777.1
KEGG:mtu:Rv2704 KEGG:mtv:RVBD_2704 PATRIC:18127850
TubercuList:Rv2704 OMA:WCFVSGT ProtClustDB:CLSK792018
EvolutionaryTrace:O07205 Uniprot:O07205
Length = 142
Score = 98 (39.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 135 DTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARA 194
D I QT L+ I L +GA + VV+T I + D+ ++ V E++A+ F P +
Sbjct: 40 DDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRPVTS 99
Query: 195 TYQVAALPLDAR-VEIECIAALPNA 218
+V AL VEIE A + +A
Sbjct: 100 MVEVTALIAPGLLVEIEADAYVGSA 124
Score = 44 (20.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 74 AALGPYSQAIKANNLVFVSGVLG 96
+A+G YS+A++ LV V+G G
Sbjct: 16 SAVG-YSRAVRIGPLVVVAGTTG 37
>TIGR_CMR|SPO_2949 [details] [associations]
symbol:SPO_2949 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 OMA:CGQVCKD RefSeq:YP_168157.1
ProteinModelPortal:Q5LP99 GeneID:3195985 KEGG:sil:SPO2949
PATRIC:23379331 Uniprot:Q5LP99
Length = 114
Score = 108 (43.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 135 DTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSP-APAR 193
D++ +QT L + +L +G+D + +++ + LAD+ DF +N ++ + P+ APAR
Sbjct: 32 DSVAEQTRDCLARVDALLAEAGSDNTRILQAIVWLADMADFAEMNAVWDAWVPAGHAPAR 91
Query: 194 ATYQVAALPLDA-RVEIECIAA 214
A + A L D +VEI AA
Sbjct: 92 ACGE-AKLARDTLKVEIIVTAA 112
>TIGR_CMR|CJE_0372 [details] [associations]
symbol:CJE_0372 "endoribonuclease L-PSP family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF01042 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
eggNOG:COG0251 InterPro:IPR006175 PANTHER:PTHR11803
HOGENOM:HOG000267214 RefSeq:YP_178391.1 ProteinModelPortal:Q5HWE4
STRING:Q5HWE4 GeneID:3231134 KEGG:cjr:CJE0372 PATRIC:20042448
OMA:RACTEAR ProtClustDB:CLSK878738
BioCyc:CJEJ195099:GJC0-377-MONOMER Uniprot:Q5HWE4
Length = 116
Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 116 RILTIYVFESPFQTGKFV----SDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLAD 171
R+ I VF+ F+T V S I+ QT++ L + + + GA +++ I LA+
Sbjct: 10 RMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALAELDALFEKIGASKGDLIQIQIWLAN 69
Query: 172 LKDFKTVNEIYAKYFPS-PAPARATYQVAALPLDARVEIECIAAL 215
++DF +NE Y + + P P RA +AL VEI+ L
Sbjct: 70 MQDFDAMNETYDAWIKNYPKPVRACVG-SALAEGYLVEIQAFGKL 113
>TIGR_CMR|BA_2691 [details] [associations]
symbol:BA_2691 "endoribonuclease L-PSP, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.30.1330.40 InterPro:IPR013813 SUPFAM:SSF55298
InterPro:IPR006175 HOGENOM:HOG000267215 PANTHER:PTHR11803
RefSeq:NP_845048.1 RefSeq:YP_019332.1 RefSeq:YP_028766.1
HSSP:P37552 ProteinModelPortal:Q81PV3 DNASU:1087345
EnsemblBacteria:EBBACT00000009055 EnsemblBacteria:EBBACT00000016755
EnsemblBacteria:EBBACT00000019538 GeneID:1087345 GeneID:2816679
GeneID:2850597 KEGG:ban:BA_2691 KEGG:bar:GBAA_2691 KEGG:bat:BAS2506
OMA:INIDGQI ProtClustDB:CLSK903098
BioCyc:BANT260799:GJAJ-2571-MONOMER
BioCyc:BANT261594:GJ7F-2665-MONOMER Uniprot:Q81PV3
Length = 131
Score = 101 (40.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 119 TIYVF-ESPFQT-GKFVS-DTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDF 175
TIY+ + T G+ V + + QT QV +NI L+ S +++ VVK T L D+
Sbjct: 29 TIYISGQVAINTDGQIVGINDLATQTRQVFENIKIALETSDLNFNDVVKLTFFLTDISQM 88
Query: 176 KTVNEIYAKYFPSP-APARATYQVAALPLD-ARVEIECIA 213
V +I +Y + PA + +V L D +EIE IA
Sbjct: 89 AIVRDIRDQYIDTNNPPASSAVEVRKLINDNLLIEIEAIA 128
>DICTYBASE|DDB_G0278373 [details] [associations]
symbol:DDB_G0278373 "endoribonuclease L-PSP
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] dictyBase:DDB_G0278373 Pfam:PF01042 EMBL:AAFI02000023
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 eggNOG:COG0251 InterPro:IPR006175
RefSeq:XP_642320.1 ProteinModelPortal:Q54Y82
EnsemblProtists:DDB0237492 GeneID:8621526 KEGG:ddi:DDB_G0278373
InParanoid:Q54Y82 Uniprot:Q54Y82
Length = 752
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 46 KKHSTPFA--CLST-SAVSNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVC 102
K T F C+ SNL ++N APA +GPYSQA F++G + ++P
Sbjct: 420 KNDKTKFLIDCIGAIEKKSNLHVQSISNWAPACIGPYSQANLYKGFTFLAGQISMIPN-- 477
Query: 103 YVSLLSFIGTISCRILTIYVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSV 162
+ L+ + + LT ++ + +++ +E + +Q+L N +L +S+V
Sbjct: 478 NLDLIKY-----SKDLT-FIINTNNNNNNDINNQLEIEIQQILLNTYNLLDCLNISFSNV 531
Query: 163 VKTTILLADLKDFKTVNEI--YAKYF 186
+++TI +++ D I Y K F
Sbjct: 532 IQSTIFISNEIDSTMFENIINYLKQF 557
>TIGR_CMR|CPS_4240 [details] [associations]
symbol:CPS_4240 "endoribonuclease, L-PSP family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000294
"nuclear-transcribed mRNA catabolic process, endonucleolytic
cleavage-dependent decay" evidence=ISS] [GO:0004521
"endoribonuclease activity" evidence=ISS] Pfam:PF01042
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 eggNOG:COG0251
InterPro:IPR006175 PROSITE:PS01094 InterPro:IPR019897
PANTHER:PTHR11803 HOGENOM:HOG000267214 RefSeq:YP_270890.1
ProteinModelPortal:Q47WD2 STRING:Q47WD2 GeneID:3522251
KEGG:cps:CPS_4240 PATRIC:21471345 OMA:CGQVCKD
BioCyc:CPSY167879:GI48-4250-MONOMER Uniprot:Q47WD2
Length = 115
Score = 95 (38.5 bits), Expect = 0.00017, P = 0.00017
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 130 GKFVSDTIEDQTEQ---VLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
G+ +D +D TEQ +L + +L +G+D ++ TI + D+ F +N ++ +
Sbjct: 25 GQVAADATKDITEQTQTMLDKVDALLIQAGSDRKHILSATIYVKDMSYFADMNAVWDAWV 84
Query: 187 PSP-APARATYQVAALPLDAR-VEIECIAA 214
P APARA A + +A VEI +AA
Sbjct: 85 PEGYAPARACV-AAKMAREALLVEISVVAA 113
>SGD|S000004133 [details] [associations]
symbol:DPH6 "Diphthamide synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017178 "diphthine-ammonia ligase
activity" evidence=IEA;IMP;IDA] [GO:0017183 "peptidyl-diphthamide
biosynthetic process from peptidyl-histidine" evidence=IEA;IMP;IDA]
UniPathway:UPA00559 SGD:S000004133 Pfam:PF01042 GO:GO:0005737
EMBL:BK006945 EMBL:X91258 EMBL:U53881 GO:GO:0090305 GO:GO:0004519
Gene3D:3.40.50.620 InterPro:IPR014729 Gene3D:3.30.1330.40
InterPro:IPR013813 SUPFAM:SSF55298 GO:GO:0017183
GeneTree:ENSGT00420000029820 InterPro:IPR002761 Pfam:PF01902
TIGRFAMs:TIGR00290 HSSP:O58996 eggNOG:COG0251 HOGENOM:HOG000247962
KO:K06927 OMA:GGEFETI OrthoDB:EOG4ZSDBS InterPro:IPR006175
PROSITE:PS01094 EMBL:Z73315 PIR:S64985 RefSeq:NP_013244.1
ProteinModelPortal:Q12429 SMR:Q12429 DIP:DIP-2618N IntAct:Q12429
MINT:MINT-539958 STRING:Q12429 PaxDb:Q12429 PeptideAtlas:Q12429
EnsemblFungi:YLR143W GeneID:850835 KEGG:sce:YLR143W CYGD:YLR143w
BioCyc:MetaCyc:MONOMER-17855 NextBio:967108 Genevestigator:Q12429
GermOnline:YLR143W GO:GO:0017178 Uniprot:Q12429
Length = 685
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 122 VFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEI 181
++ S Q+ K S+T+E Q+E + + +IL ++ + ++ ++L+ D+ +F +N+I
Sbjct: 322 LYISNLQSRK--SETVEKQSEDIFTELADILHSNQIPRNHILSASLLIRDMSNFGKINKI 379
Query: 182 Y------AKYFPSPAPARATYQVAALPLDARVEIECIAALPN 217
Y +KY P P P+RA LP D V++ + + N
Sbjct: 380 YNEFLDLSKYGPLP-PSRACVGSKCLPEDCHVQLSVVVDVKN 420
>TIGR_CMR|SPO_1005 [details] [associations]
symbol:SPO_1005 "endoribonuclease L-PSP family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004521
"endoribonuclease activity" evidence=ISS] [GO:0006402 "mRNA
catabolic process" evidence=ISS] Pfam:PF01042 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.1330.40 InterPro:IPR013813
SUPFAM:SSF55298 InterPro:IPR006175 HOGENOM:HOG000267215
PANTHER:PTHR11803 OMA:WCFVSGT RefSeq:YP_166257.1
ProteinModelPortal:Q5LUP8 GeneID:3194692 KEGG:sil:SPO1005
PATRIC:23375303 ProtClustDB:CLSK759102 Uniprot:Q5LUP8
Length = 171
Score = 103 (41.3 bits), Expect = 0.00065, P = 0.00065
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 140 QTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVA 199
Q L+ IG LK +GA ++ VV+ T L D +F+ I A+ F + PA +
Sbjct: 94 QCRSALEVIGAALKEAGAGFADVVRVTYYLPDAAEFEPCWPILAETFGANPPAATMIECG 153
Query: 200 ALPLDARVEIECIAALP 216
+ R+EIE A LP
Sbjct: 154 LIDPKYRIEIEVTALLP 170
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.131 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 218 218 0.00091 112 3 11 22 0.36 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 596 (63 KB)
Total size of DFA: 161 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.97u 0.13s 18.10t Elapsed: 00:00:01
Total cpu time: 17.98u 0.13s 18.11t Elapsed: 00:00:01
Start: Sat May 11 10:17:56 2013 End: Sat May 11 10:17:57 2013