BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027808
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52760|UK114_MOUSE Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3
Length = 135
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 95/153 (62%), Gaps = 28/153 (18%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTI 120
S +++ + T KAPAA+GPYSQA++ + +++SG +GL P
Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPS-------------------- 42
Query: 121 YVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNE 180
+G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNE
Sbjct: 43 --------SGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNE 94
Query: 181 IYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
IY YF PARA YQVAALP +RVEIE IA
Sbjct: 95 IYKTYFQGSLPARAAYQVAALPRGSRVEIEAIA 127
>sp|P52758|UK114_HUMAN Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1
Length = 137
Score = 134 bits (336), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
++ + T KAP A+GPYSQA+ + +++SG +G+ P
Sbjct: 5 IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPS---------------------- 42
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY
Sbjct: 43 ------SGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIY 96
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
+YF S PARA YQVAALP +R+EIE +A
Sbjct: 97 KQYFKSNFPARAAYQVAALPKGSRIEIEAVA 127
>sp|Q10121|YSD2_CAEEL RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2
PE=3 SV=3
Length = 171
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 29/150 (19%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
++ + + AP A+GPYSQA++A N +++SG LGL P
Sbjct: 41 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDP------------------------ 76
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+TG +E QT Q LKN+GE+LKA+GADY +VVKTT+LL ++ DF VNE+Y
Sbjct: 77 ----KTGDLKEGVVE-QTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYG 131
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIA 213
+YF SP PARA YQVAALP VEIE +A
Sbjct: 132 QYFKSPYPARAAYQVAALPKGGLVEIEAVA 161
>sp|P52759|UK114_RAT Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3
Length = 137
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 28/153 (18%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTI 120
S +++ + T+KAPAA+G YSQA+ + ++VSG +G+ P
Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPS-------------------- 42
Query: 121 YVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNE 180
+G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNE
Sbjct: 43 --------SGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNE 94
Query: 181 IYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
IY YF PARA YQVAALP +R+EIE IA
Sbjct: 95 IYKTYFQGNLPARAAYQVAALPKGSRIEIEAIA 127
>sp|Q3T114|UK114_BOVIN Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3
Length = 137
Score = 129 bits (323), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 28/153 (18%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTI 120
S +++ + T KAPAA+GPYSQA+ + +++SG LG+ P
Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPA-------------------- 42
Query: 121 YVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNE 180
+G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF TVN+
Sbjct: 43 --------SGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSTVND 94
Query: 181 IYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
+Y +YF S PARA YQVAALP RVEIE IA
Sbjct: 95 VYKQYFQSSFPARAAYQVAALPKGGRVEIEAIA 127
>sp|P80601|UK114_CAPHI Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3
Length = 137
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 91/153 (59%), Gaps = 28/153 (18%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTI 120
S ++ + T KAPAA+GPYSQA+ + +++SG LG+ P
Sbjct: 3 SLVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPA-------------------- 42
Query: 121 YVFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNE 180
+G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF VN+
Sbjct: 43 --------SGQLVPGGVVEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSAVND 94
Query: 181 IYAKYFPSPAPARATYQVAALPLDARVEIECIA 213
+Y +YF S PARA YQVAALP RVEIE IA
Sbjct: 95 VYKQYFQSSFPARAAYQVAALPKGGRVEIEAIA 127
>sp|Q9ZKQ6|Y944_HELPJ RutC family protein jhp_0879 OS=Helicobacter pylori (strain J99)
GN=jhp_0879 PE=3 SV=1
Length = 125
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+KE + + AP A+GPYSQAI N+LVFVSG LG+
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGI------------------------- 35
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY
Sbjct: 36 ---DVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIY 92
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
YF P PARAT+QVA LP DA VEIE IA
Sbjct: 93 GSYFKEPYPARATFQVAKLPKDALVEIEAIA 123
>sp|O25598|Y944_HELPY RutC family protein HP_0944 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=HP_0944 PE=3 SV=1
Length = 125
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+KE + + AP A+GPYSQAI N+LVFVSG LG+
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGI------------------------- 35
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY
Sbjct: 36 ---DVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIY 92
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
YF P PARAT+QVA LP DA VEIE IA
Sbjct: 93 GSYFTEPYPARATFQVAKLPKDALVEIEAIA 123
>sp|P55654|Y4SK_RHISN RutC family protein y4sK OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01620 PE=3 SV=1
Length = 126
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 84/151 (55%), Gaps = 28/151 (18%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFE 124
E + TN AP A+GPYSQAIK +L+FVSG L + P
Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDP------------------------- 37
Query: 125 SPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAK 184
TG+F S +Q EQ LKN+ I +A+G D S VKTT+LL DL DF +N +Y
Sbjct: 38 ---ATGEFNSANAVEQAEQCLKNLQAIARAAGTDLSKTVKTTVLLTDLGDFADINRVYTG 94
Query: 185 YFPSPAPARATYQVAALPLDARVEIECIAAL 215
+F +P PARA Y+V ALP A+VEIE + +L
Sbjct: 95 FFSTPYPARACYEVKALPKGAKVEIEAVISL 125
>sp|O58584|Y854_PYRHO RutC family protein PH0854 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0854 PE=1 SV=2
Length = 126
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+KE + T AP +GPYSQAIKA N +F++G + + P
Sbjct: 1 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ V I+DQT QVL+NI IL+A+G + V+K T+ L D+ DF +NE+Y
Sbjct: 38 -----KTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVY 92
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
A+YF PAR +V+ LP D +EIE IA
Sbjct: 93 AEYFGESKPARVAVEVSRLPKDVLIEIEAIA 123
>sp|P37552|RIDA_BACSU Enamine/imine deaminase OS=Bacillus subtilis (strain 168) GN=yabJ
PE=1 SV=3
Length = 125
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 29/151 (19%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ +AV T APAA+GPYSQ I NN+ + SG + L P
Sbjct: 1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+G+ V+ I++QT QV N+ +L+ +GA + +VVK T+ +AD++ F VNE+Y
Sbjct: 38 ------SGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVY 91
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
+YF + PAR+ +VA LP DA VEIE IA
Sbjct: 92 GQYFDTHKPARSCVEVARLPKDALVEIEVIA 122
>sp|Q9UZA3|Y1251_PYRAB RutC family protein PYRAB12510 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB12510 PE=3 SV=1
Length = 127
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 28/150 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
KE + T KAP +GPYSQAIK N +FV+G + + PE
Sbjct: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPE----------------------- 39
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
TG+ V I++QT++V++NI IL+ +GA + VVK T+ L DL DF +NE+Y+
Sbjct: 40 -----TGEIVKGDIKEQTKRVIENIKAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYS 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIA 213
+YF PAR +V+ LP D +E+E IA
Sbjct: 95 EYFGESKPARVAVEVSRLPKDVLIEMEAIA 124
>sp|Q8U308|RIDA_PYRFU Enamine/imine deaminase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=yjgF PE=1 SV=1
Length = 126
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+KE + AP +GPYSQAIKA N +F++G + + P
Sbjct: 1 MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ V I+ QT QVL+NI IL+A+G + VVK T+ L D+ DF +NE+Y
Sbjct: 38 -----KTGEIVKGDIKAQTRQVLENIKAILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVY 92
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
A+YF PARA +V+ LP D +EIE IA
Sbjct: 93 AEYFGESKPARAAVEVSRLPKDVLIEIEAIA 123
>sp|O52178|DFRA_MYXXA Protein DfrA OS=Myxococcus xanthus GN=dfrA PE=3 SV=1
Length = 131
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 30/152 (19%)
Query: 64 KEAVVTNKAPAALGPYSQAIK--ANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIY 121
++A+ +++AP A+GPYSQA++ A + F+SG + L P
Sbjct: 6 RKAIHSDQAPKAIGPYSQAVQVDAGKMTFLSGQIPLDPA--------------------- 44
Query: 122 VFESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEI 181
T + V + Q E+V++N+ +L ASG D+S VV+ TI L DL DF VNE+
Sbjct: 45 -------TMEMVQGDVVAQAERVMENLKAVLAASGLDFSHVVRCTIFLTDLGDFARVNEV 97
Query: 182 YAKYFPSPAPARATYQVAALPLDARVEIECIA 213
Y +YF PARAT QV+ALP ++VEI+ IA
Sbjct: 98 YGRYFTGAPPARATVQVSALPRGSKVEIDAIA 129
>sp|P52761|Y709_SYNY3 RutC family protein slr0709 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0709 PE=3 SV=1
Length = 130
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 28/151 (18%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESP 126
+ T +APA +GPY+QAI AN +F +G + L P+ ++ +G
Sbjct: 6 IQTAQAPAPVGPYNQAIAANGFLFTAGQIALDPQT-----MTIMG--------------- 45
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
+E Q +QVL N+G +L+ +G + +VVKTT+ L D+ DF VN IY +YF
Sbjct: 46 -------EGNVEVQAKQVLTNLGAVLQEAGCGWENVVKTTVFLKDMNDFAAVNAIYGQYF 98
Query: 187 -PSPAPARATYQVAALPLDARVEIECIAALP 216
+ APAR+ +VA LP D VEI+C+A LP
Sbjct: 99 DEATAPARSCVEVARLPKDVLVEIDCVAVLP 129
>sp|Q97U19|Y3206_SULSO RutC family protein SSO3206 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO3206 PE=3 SV=1
Length = 126
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 28/151 (18%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+KE + T KAP +GPYSQ +K ++++VSG + + P
Sbjct: 1 MKEIIFTEKAPKPIGPYSQGVKVGDILYVSGQIPVDP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+T + V IE+QT +V++NI +L+A+G VV + + L D+KDF+ NE+Y
Sbjct: 38 -----KTNEVVGKNIEEQTIRVIENIKAVLEAAGYMLDDVVMSFVYLKDIKDFQRFNEVY 92
Query: 183 AKYFPSPAPARATYQVAALPLDARVEIECIA 213
+KYF + PAR T +V+ LP D +EI IA
Sbjct: 93 SKYFSNKPPARVTVEVSRLPRDVLIEITVIA 123
>sp|O66689|Y364_AQUAE RutC family protein aq_364 OS=Aquifex aeolicus (strain VF5)
GN=aq_364 PE=3 SV=1
Length = 125
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 31/147 (21%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESPFQ 128
T KAP +GPYSQA++ N +F+SG +G+ PE
Sbjct: 6 TPKAPVPVGPYSQAVEVNGFLFISGQIGINPE---------------------------- 37
Query: 129 TGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP- 187
TGK V + ++Q Q+ KN+ IL+ +G ++VK TI + D+K FK +NEIY YF
Sbjct: 38 TGKLV-EGFKEQVIQIFKNVDAILEEAGLKRENIVKVTIYITDIKKFKELNEIYEDYFKD 96
Query: 188 -SPAPARATYQVAALPLDARVEIECIA 213
S PAR T V LPL+A VEIE +A
Sbjct: 97 VSVKPARVTVGVKELPLNAEVEIEIVA 123
>sp|O34133|ALDR_LACLA Putative regulator AldR OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=aldR PE=3 SV=2
Length = 126
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 77/149 (51%), Gaps = 28/149 (18%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESP 126
+ T APAA+GPY Q N L++ SG + L P
Sbjct: 4 IATLDAPAAIGPYVQGKIVNGLLYASGQIPLNP--------------------------- 36
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
G+ V D+IE QTEQV+KNI ILK + +D+ V+KTT L +++DF N IY+K+F
Sbjct: 37 -LNGEIVGDSIETQTEQVMKNISAILKEAHSDFDLVIKTTCFLKNIEDFSRFNAIYSKFF 95
Query: 187 PSPAPARATYQVAALPLDARVEIECIAAL 215
PAR+ VA LP + +EIE IA +
Sbjct: 96 DKEFPARSAVGVAGLPKNVLIEIEVIAEV 124
>sp|P97117|Y142_LEUMC RutC family protein in leuC 5'region OS=Leuconostoc mesenteroides
subsp. cremoris PE=3 SV=1
Length = 130
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 32/154 (20%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K+ V T AP ALGPYSQAI +N +++SG +G+ PE
Sbjct: 3 KKVVSTTTAPKALGPYSQAILNDNTLYISGQIGIDPE----------------------- 39
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
T +F T +Q Q+ NI IL + + +VK + D+ DF VN+IYA
Sbjct: 40 -----TDEFAGATTAEQAHQIFDNIDNILHEAEFSRNDIVKAALFFDDIADFALVNDIYA 94
Query: 184 KYFPSPA----PARATYQVAALPLDARVEIECIA 213
+YF + + PAR+ QVAALP +A++EIE A
Sbjct: 95 QYFDTTSVEEFPARSAVQVAALPKNAKLEIEITA 128
>sp|Q973T6|Y811_SULTO RutC family protein STK_08110 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_08110 PE=1
SV=1
Length = 125
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 73/148 (49%), Gaps = 28/148 (18%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFE 124
E V T KAP +GPYSQAIK N ++VSG + + P
Sbjct: 2 ETVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDP------------------------- 36
Query: 125 SPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAK 184
+T + V I+ QT QVL NI EI+KA+G S V + L D+ F N +YA+
Sbjct: 37 ---RTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAE 93
Query: 185 YFPSPAPARATYQVAALPLDARVEIECI 212
YF PAR T +V+ LP DA +EI I
Sbjct: 94 YFKDKPPARVTVEVSRLPKDALIEIAVI 121
>sp|O43003|MMF1_SCHPO Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf1 PE=3 SV=1
Length = 162
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 33/140 (23%)
Query: 77 GPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESPFQTGKFVSDT 136
GPY+QAIKAN +++ SG + P GK + T
Sbjct: 51 GPYNQAIKANGVIYCSG------------------------------QIPVANGKVIEGT 80
Query: 137 IEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATY 196
+ DQT Q L N+ E+L +G+ + +VK I LAD+ DF VN++Y + P P PAR+
Sbjct: 81 VGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCV 140
Query: 197 QVAALPLDA---RVEIECIA 213
V +PL ++EIECIA
Sbjct: 141 AVKTVPLSTQGVKIEIECIA 160
>sp|P40185|MMF1_YEAST Protein MMF1, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MMF1 PE=1 SV=1
Length = 145
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 29/151 (19%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESP 126
V T AP A YSQA+KANN V+VSG + P+
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPD-------------------------- 57
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
K V +I ++ EQV +N+ IL S + ++VK + LAD+K+F N +YAK+F
Sbjct: 58 ---NKPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHF 114
Query: 187 PSPAPARATYQVAALPLDARVEIECIAALPN 217
+ PAR+ VA+LPL+ +E+E IA N
Sbjct: 115 HTHKPARSCVGVASLPLNVDLEMEVIAVEKN 145
>sp|Q9UR06|MMF2_SCHPO Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf2 PE=3 SV=1
Length = 126
Score = 90.5 bits (223), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 33/141 (23%)
Query: 77 GPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESPFQTGKFVSDT 136
GPY+QA+K+ L+F SG ++ + G FV T
Sbjct: 15 GPYNQAVKSGGLIFCSG------------------------------QAAVKDGNFVPGT 44
Query: 137 IEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATY 196
I++QT ++N+ E+L+ +G+ +VK I L D+ DF +NE+Y + P P PAR T
Sbjct: 45 IQEQTRLTIENLAEVLRVAGSSLEKLVKVNIFLTDIDDFAAMNEVYKEMLPDPMPARTTV 104
Query: 197 QVAALPLDA---RVEIECIAA 214
+PL + ++EIECIAA
Sbjct: 105 AAGKIPLSSKGGKIEIECIAA 125
>sp|P40431|YVN1_AZOVI RutC family protein in vnfA 5'region OS=Azotobacter vinelandii PE=3
SV=2
Length = 127
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K + T+KAPAA+G YSQAI+A + V++SG + L P GT+
Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDP-----------GTM---------- 41
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ V E QT +V +N+ +++A+G ++ +VK I L DL F NE
Sbjct: 42 -------ELVEGDFEAQTVRVFENLKAVVEAAGGSFADIVKLNIFLTDLAHFANGNECMG 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
+YF P PARA A+LP A+VE++ I L
Sbjct: 95 RYFAQPYPARAAIACASLPRGAQVEMDGILVL 126
>sp|P0AGL4|TDCF_SHIFL Putative reactive intermediate deaminase TdcF OS=Shigella flexneri
GN=tdcF PE=3 SV=1
Length = 129
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+K+ + T +AP A+GPY Q + ++VF SG + + P
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y
Sbjct: 38 -----QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
++F P R+ QVA LP D ++EIE IA
Sbjct: 92 KQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
>sp|P0AGL2|TDCF_ECOLI Putative reactive intermediate deaminase TdcF OS=Escherichia coli
(strain K12) GN=tdcF PE=1 SV=1
Length = 129
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+K+ + T +AP A+GPY Q + ++VF SG + + P
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y
Sbjct: 38 -----QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
++F P R+ QVA LP D ++EIE IA
Sbjct: 92 KQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
>sp|P0AGL3|TDCF_ECOL6 Putative reactive intermediate deaminase TdcF OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tdcF PE=3
SV=1
Length = 129
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+K+ + T +AP A+GPY Q + ++VF SG + + P
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
QTG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y
Sbjct: 38 -----QTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
++F P R+ QVA LP D ++EIE IA
Sbjct: 92 KQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIA 125
>sp|P40037|HMF1_YEAST Protein HMF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HMF1 PE=1 SV=1
Length = 129
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 29/132 (21%)
Query: 83 IKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESPFQTGKFVSDTIEDQTE 142
+K NNL+F+SG + + P+ K V +I D+ E
Sbjct: 24 MKVNNLIFLSGQIPVTPD-----------------------------NKLVEGSIADKAE 54
Query: 143 QVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALP 202
QV++NI +L+AS + VVK I LAD+ F N +YAKYF + PAR+ VAALP
Sbjct: 55 QVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALP 114
Query: 203 LDARVEIECIAA 214
L +E+E IAA
Sbjct: 115 LGVDMEMEAIAA 126
>sp|P0AF95|RIDA_SHIFL Enamine/imine deaminase OS=Shigella flexneri GN=yjgF PE=3 SV=2
Length = 128
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T APAA+GPY Q + N++ SG + + P
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y
Sbjct: 38 -----KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
+F PAR+ +VA LP D ++EIE IA
Sbjct: 92 EAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
>sp|P0AF93|RIDA_ECOLI Enamine/imine deaminase OS=Escherichia coli (strain K12) GN=ridA
PE=1 SV=2
Length = 128
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T APAA+GPY Q + N++ SG + + P
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y
Sbjct: 38 -----KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
+F PAR+ +VA LP D ++EIE IA
Sbjct: 92 EAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
>sp|P0AF94|RIDA_ECOL6 Enamine/imine deaminase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yjgF PE=3 SV=2
Length = 128
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T APAA+GPY Q + N++ SG + + P
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y
Sbjct: 38 -----KTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
+F PAR+ +VA LP D ++EIE IA
Sbjct: 92 EAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
>sp|Q89AG0|Y334_BUCBP RutC family protein bbp_334 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=bbp_334 PE=3 SV=1
Length = 126
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 35/152 (23%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFE 124
+ + T+K+P +GPYSQAI+ N F+SG +
Sbjct: 3 KEIHTHKSPKPIGPYSQAIQIKNFTFLSGQIS---------------------------- 34
Query: 125 SPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAK 184
QT ++ I QT+ +L+NI IL++ + ++VKTTI + +L D VN++Y K
Sbjct: 35 ---QTDN-INTNISFQTQSILQNINYILESKEMNVGNIVKTTIFITNLNDLTIVNDVYQK 90
Query: 185 YF---PSPAPARATYQVAALPLDARVEIECIA 213
+F PAR+ +V+ LP +A++EI+ IA
Sbjct: 91 FFLKYTKTFPARSCVEVSKLPKNAKIEIDAIA 122
>sp|Q7CP78|RIDA_SALTY Enamine/imine deaminase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=ridA PE=1 SV=1
Length = 128
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T APAA+GPY Q + ++V SG + + P
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG V++ + Q Q L+N+ I++A+G +VKTT+ + DL DF TVN Y
Sbjct: 38 -----KTGA-VAEDVSAQARQSLENVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATY 91
Query: 183 AKYFPSPA---PARATYQVAALPLDARVEIECIA 213
+F PAR+ +VA LP D ++EIE IA
Sbjct: 92 EAFFTEHNATFPARSCVEVARLPKDVKIEIEAIA 125
>sp|Q9L6B5|Y1466_PASMU RutC family protein PM1466 OS=Pasteurella multocida (strain Pm70)
GN=PM1466 PE=3 SV=1
Length = 129
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 35/156 (22%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T+ APAA+GPY QA+ N++ SG + + P
Sbjct: 1 MTKVIHTDNAPAAIGPYVQAVDLGNMLLTSGQIPVNP----------------------- 37
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+TG+ +D + Q Q L+N+ I++ +G +++VKTT+ + DL DF VN Y
Sbjct: 38 -----KTGEVPADIVA-QARQSLENVKAIVEQAGLQVANIVKTTVFVKDLNDFAAVNAEY 91
Query: 183 AKYF-----PSPAPARATYQVAALPLDARVEIECIA 213
++F PS PAR+ +VA LP D +EIE IA
Sbjct: 92 ERFFKENNHPS-FPARSCVEVARLPKDVGIEIEAIA 126
>sp|P44839|Y719_HAEIN RutC family protein HI_0719 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0719 PE=1 SV=1
Length = 130
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 33/155 (21%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + + T KAPAA+GPY QA+ NLV SG + + P
Sbjct: 2 MTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNP----------------------- 38
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
TG+ +D + Q Q L+N+ I++ +G + +VKTT+ + DL DF VN Y
Sbjct: 39 -----ATGEVPADIVA-QARQSLENVKAIIEKAGLTAADIVKTTVFVKDLNDFAAVNAEY 92
Query: 183 AKYFPSPA----PARATYQVAALPLDARVEIECIA 213
++F PAR+ +VA LP D +EIE IA
Sbjct: 93 ERFFKENNHPNFPARSCVEVARLPKDVGLEIEAIA 127
>sp|P57452|Y371_BUCAI RutC family protein BU371 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU371 PE=3 SV=1
Length = 128
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYV 122
+ + T AP +GPYSQA+K +N + +SG + I IS +I
Sbjct: 1 MNHIIETKDAPKPIGPYSQALKIDNFIILSGQIP-------------IDVISNQI----- 42
Query: 123 FESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIY 182
+ I +QT VLKNI IL + +++KTT+ DLK +NEIY
Sbjct: 43 -----------PENIAEQTYLVLKNIKLILVHAKFQVHNIIKTTVFTTDLKKINIINEIY 91
Query: 183 AKYF---PSPAPARATYQVAALPLDARVEIECIA 213
K+F S PAR+ +V LP + ++EIE +A
Sbjct: 92 KKFFIDNKSNFPARSCVEVQKLPKNVKIEIEAMA 125
>sp|Q8K9H7|Y359_BUCAP RutC family protein BUsg_359 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_359 PE=3 SV=1
Length = 128
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 32/150 (21%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESP 126
V T AP +GPYSQAIK N + +SG + +
Sbjct: 5 VNTENAPKPIGPYSQAIKNENFLIISGQIPI----------------------------D 36
Query: 127 FQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF 186
++GK + + I +QT VLKNI I+ AS ++K T+ +L+ +NEIY K+F
Sbjct: 37 VKSGK-IPNNISEQTYIVLKNIKSIIIASKYTIQDIIKITVFTTNLEKIHIINEIYEKFF 95
Query: 187 ---PSPAPARATYQVAALPLDARVEIECIA 213
S P R+ +V LP + ++E+E +A
Sbjct: 96 IDNKSSFPTRSCIEVQKLPKNVKIEMEAMA 125
>sp|Q6FFZ5|RUTC_ACIAD Putative aminoacrylate peracid reductase RutC OS=Acinetobacter sp.
(strain ADP1) GN=rutC PE=3 SV=1
Length = 126
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
KE ++ P L PY A KA+N+V+VSG+L L + + +G +
Sbjct: 3 KEIILPEGTPPPLAPYVPATKADNIVYVSGILPLDEN----NDVVHVGDAAA-------- 50
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
QT VL+ I IL +G V I L D D+ +N++YA
Sbjct: 51 ----------------QTRHVLETIKHILSNAGGSLKDVTFNHIFLRDWADYPAINQVYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
+YFP PAR QV + DA +EI +A +
Sbjct: 95 EYFPEERPARYCVQVGLVKPDALIEIASVAHV 126
>sp|Q9KWS2|AMND_PSESP 2-aminomuconate deaminase OS=Pseudomonas sp. GN=amnD PE=1 SV=1
Length = 142
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 95 LGLVPEVCYVSLLSFI-GTISCRILTIYVFESPFQTGKFVSDTIEDQTEQVLKNIGEILK 153
+G P V F+ GT S R +V P TG+ IE QT +V+ NI +IL+
Sbjct: 19 MGSFPHVKRAGDFLFVSGTSSRRPDNTFVGAEPDDTGR-PRPNIELQTREVISNIRDILQ 77
Query: 154 ASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV-EIECI 212
+ GAD VV+ L ++ DF N++YA++F + PAR T V LP V EI+ +
Sbjct: 78 SVGADLGDVVEVCSYLVNMNDFAAYNKVYAEFFDATGPARTTVAVHQLPHPQLVIEIKVV 137
Query: 213 AALP 216
A P
Sbjct: 138 AYKP 141
>sp|A8IAD2|RUTC_AZOC5 Putative aminoacrylate peracid reductase RutC OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=rutC PE=3 SV=1
Length = 128
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 28/149 (18%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFE 124
A++ + L PYS ++A+N+++VSG L + V L G +C
Sbjct: 4 RAIIPPGSGVPLAPYSPGMQADNVIYVSGTLPFDKDNNVVHL----GDAAC--------- 50
Query: 125 SPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAK 184
QT VL+ I +L+A+G+ + V I L D ++ +N +YA+
Sbjct: 51 ---------------QTRHVLEIIKGVLEAAGSGMADVTFNHIFLTDWANYGAINAVYAE 95
Query: 185 YFPSPAPARATYQVAALPLDARVEIECIA 213
YFP PAR QV + A VEI IA
Sbjct: 96 YFPGEKPARYCVQVGLVKPGALVEIATIA 124
>sp|D0LI57|RUTC_HALO1 Putative aminoacrylate peracid reductase RutC OS=Haliangium
ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=rutC
PE=3 SV=1
Length = 130
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 28/143 (19%)
Query: 73 PAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVFESPFQTGKF 132
P + PYS A+N+V+VSG L L ++L
Sbjct: 12 PKPIAPYSAGAMADNVVYVSGTLAL--------------GEGGQVL-------------H 44
Query: 133 VSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPA 192
V D + QT VL+ I L+A+G + + I + D+K +NE+YA+YFP PA
Sbjct: 45 VGDA-KAQTRHVLETIKTTLEAAGGGMADITFNHIFVKSWDDYKAINEVYAEYFPGDKPA 103
Query: 193 RATYQVAALPLDARVEIECIAAL 215
R Q + + VEI IA L
Sbjct: 104 RYCIQCGLVKPELLVEIASIAHL 126
>sp|Q32HQ1|RUTC_SHIDS Putative aminoacrylate peracid reductase RutC OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|Q1RDK7|RUTC_ECOUT Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain UTI89 / UPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|B1LIZ5|RUTC_ECOSM Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|D2NGI7|RUTC_ECOS5 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O150:H5 (strain SE15) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|P0AFQ5|RUTC_ECOLI Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain K12) GN=rutC PE=1 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|B1IV87|RUTC_ECOLC Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|P0AFQ6|RUTC_ECOL6 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rutC PE=1
SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|Q0TJ57|RUTC_ECOL5 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
>sp|D5CZH0|RUTC_ECOKI Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O18:K1:H7 (strain IHE3034 / ExPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPEVCYVSLLSFIGTISCRILTIYVF 123
K ++ + A L P+ A+ +V+VSG L F
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLA--------------------------F 36
Query: 124 ESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYA 183
+ +D + QT VL+ I ++++ +G + V +I + D K++ +NEIYA
Sbjct: 37 DQ--HNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYA 94
Query: 184 KYFPSPAPARATYQVAALPLDARVEIECIAAL 215
++FP PAR Q + DA VEI IA +
Sbjct: 95 EFFPGDKPARFCIQCGLVKPDALVEIATIAHI 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,933,972
Number of Sequences: 539616
Number of extensions: 2733064
Number of successful extensions: 7848
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 7625
Number of HSP's gapped (non-prelim): 208
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)