Your job contains 1 sequence.
>027812
MHWMAFTQHGRNALRQITKESSDRVLHHPLLYSCQGVRYRRLEVILTTKVDKLGKAGETV
KVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEEEEVKVIRKSEDNMSREFEKA
ARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTKEELVAEVSRQLSISIEPENLHL
PSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027812
(218 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2168377 - symbol:AT5G53070 species:3702 "Arabi... 680 6.5e-67 1
TIGR_CMR|CHY_0039 - symbol:CHY_0039 "ribosomal protein L9... 122 1.4e-07 1
TIGR_CMR|GSU_0668 - symbol:GSU_0668 "ribosomal protein L9... 115 8.9e-07 1
TIGR_CMR|NSE_0060 - symbol:NSE_0060 "ribosomal protein L9... 80 2.2e-05 2
TIGR_CMR|CJE_0766 - symbol:CJE_0766 "ribosomal protein L9... 77 0.00011 2
TIGR_CMR|CBU_0867 - symbol:CBU_0867 "ribosomal protein L9... 103 0.00025 1
POMBASE|SPCC777.17c - symbol:SPCC777.17c "mitochondrial r... 90 0.00062 1
>TAIR|locus:2168377 [details] [associations]
symbol:AT5G53070 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000244 Pfam:PF01281
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10
InterPro:IPR009027 InterPro:IPR020069 InterPro:IPR020070
PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653
EMBL:AB018116 eggNOG:NOG277901 UniGene:At.27262 EMBL:BT002884
EMBL:BT004396 IPI:IPI00519351 RefSeq:NP_200119.1
ProteinModelPortal:Q9LVU5 SMR:Q9LVU5 PaxDb:Q9LVU5 PRIDE:Q9LVU5
EnsemblPlants:AT5G53070.1 GeneID:835387 KEGG:ath:AT5G53070
TAIR:At5g53070 HOGENOM:HOG000006313 InParanoid:Q9LVU5 OMA:PGYFRNH
PhylomeDB:Q9LVU5 ProtClustDB:CLSN2686155 ArrayExpress:Q9LVU5
Genevestigator:Q9LVU5 Uniprot:Q9LVU5
Length = 221
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 128/220 (58%), Positives = 172/220 (78%)
Query: 4 MAFTQHGRNALRQITKESS-----DRVLHHPLLYSCQGVRYRRLEVILTTKVDKLGKAGE 58
MA+ RN +R + + + +HHPLL++CQGVRYR+LEVILTT ++KLGKAGE
Sbjct: 1 MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60
Query: 59 TVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVE-EEEVKVIRKSEDNMSREF 117
TVKVAPGYFRNHLMPKLLAVPNI+K+A+LIREQR++ E +EEVKV+ K+ + ++E+
Sbjct: 61 TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEY 120
Query: 118 EKAARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTKEELVAEVSRQLSISIEPEN 177
EKAA+RL NA LVLR+ + EK ++R SKD ++++P+TKEE+V+EV+RQL + I+P+N
Sbjct: 121 EKAAKRLANANLVLRKLVDKEKFKNRSSKDDKPDVQTPITKEEIVSEVARQLCVKIDPDN 180
Query: 178 LHLPSPLSAFGEYEVPMRLPKAIPLPEGKVQWTLNVKVRG 217
+ L +PL FGEYEVP++ PK IPLP+G VQW L VKVRG
Sbjct: 181 VVLAAPLETFGEYEVPLKFPKTIPLPQGTVQWILKVKVRG 220
>TIGR_CMR|CHY_0039 [details] [associations]
symbol:CHY_0039 "ribosomal protein L9" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594
Pfam:PF01281 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0359 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 HOGENOM:HOG000040336 OMA:ITVPDIH RefSeq:YP_358911.1
ProteinModelPortal:Q3AG23 STRING:Q3AG23 GeneID:3728530
KEGG:chy:CHY_0039 PATRIC:21273275 BioCyc:CHYD246194:GJCN-39-MONOMER
Uniprot:Q3AG23
Length = 151
Score = 122 (48.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 42 LEVILTTKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEEE 101
++VIL T+V KLGK G+ V+VA GY RN+L+ K LAV E +++Q+ +E+
Sbjct: 1 MKVILLTEVKKLGKKGDVVEVAEGYGRNYLIAKGLAVEATEGKLKELQQQKEAANRRKEK 60
Query: 102 EVKVIRKSEDNMSR-EFEKAARRLENARLVLRRFPNIEKLRSRESK-DVPIELRSPVTKE 159
E++ R + + E + EN +L + + + E + I+ R KE
Sbjct: 61 ELQEARSLAEKLKNIELVLYGKGGENGKL-FGAITSKDIAEALEKNYQIKIDKRKLDLKE 119
Query: 160 ELVAEVSRQLSISIEPE 176
+ A + + + PE
Sbjct: 120 NIKALGVYTVEVKLHPE 136
>TIGR_CMR|GSU_0668 [details] [associations]
symbol:GSU_0668 "ribosomal protein L9" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00503
InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0359 HOGENOM:HOG000040337 KO:K02939
Gene3D:3.10.430.100 Gene3D:3.40.5.10 InterPro:IPR009027
InterPro:IPR020069 InterPro:IPR020070 PANTHER:PTHR21368
Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653 TIGRFAMs:TIGR00158
PROSITE:PS00651 ProtClustDB:PRK00137 OMA:TGIYEIE RefSeq:NP_951725.1
ProteinModelPortal:Q74FE1 GeneID:2685560 KEGG:gsu:GSU0668
PATRIC:22024095 BioCyc:GSUL243231:GH27-687-MONOMER Uniprot:Q74FE1
Length = 148
Score = 115 (45.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 37/139 (26%), Positives = 65/139 (46%)
Query: 42 LEVILTTKVDKLGKAGETVKVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRICQPVEE- 100
++VIL V+ LG G+ VKVAPGY RN+L+P+ A+ EK A + +R +
Sbjct: 1 MKVILKENVENLGHIGDIVKVAPGYARNYLIPRNFAIEATEKNAKALEHAKRQLEYKRNK 60
Query: 101 --EEVKVIRKSEDNMSREFEKAARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTK 158
E+ +++ + +S A E +L N+E +++ V I+ R +
Sbjct: 61 VLEQARLLVAKIEGLSLSISHQAG--EEGKL-FGSVTNMELAELLKAQGVEID-RKKIVL 116
Query: 159 EELVAEVSRQLSI-SIEPE 176
E + V ++ + PE
Sbjct: 117 AEPIKHVGEFTAVVKVHPE 135
>TIGR_CMR|NSE_0060 [details] [associations]
symbol:NSE_0060 "ribosomal protein L9" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594 Pfam:PF01281
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0359
HOGENOM:HOG000040337 KO:K02939 OMA:GKQIFGS Gene3D:3.10.430.100
Gene3D:3.40.5.10 InterPro:IPR009027 InterPro:IPR020069
InterPro:IPR020070 PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658
SUPFAM:SSF55653 TIGRFAMs:TIGR00158 PROSITE:PS00651
RefSeq:YP_505961.1 ProteinModelPortal:Q2GEY5 STRING:Q2GEY5
GeneID:3931413 KEGG:nse:NSE_0060 PATRIC:22680235
ProtClustDB:CLSK2527628 BioCyc:NSEN222891:GHFU-97-MONOMER
Uniprot:Q2GEY5
Length = 160
Score = 80 (33.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 24/83 (28%), Positives = 45/83 (54%)
Query: 110 EDNMSREFEKAARRLENARLVLRRFPNIEKLRSRESKDVPIELRSPVTKEELVAEVSRQL 169
E++ + + A LE A + + F I+ L + + L V+ +++VAE+S++
Sbjct: 48 ENSKEKLAAQQAAELETASELAKSFTEIDVLPIYAQAERGV-LFGAVSAKQVVAELSKK- 105
Query: 170 SISIEPENLHLPSPLSAFGEYEV 192
I I +N+ L +P+ A GE+EV
Sbjct: 106 GIEITTKNVVLGAPIKALGEHEV 128
Score = 72 (30.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 44 VILTTKVDKLGKAGETVKVAPGYFRNHLMPKLLAV 78
VIL KLG G+ +KV G+ RN+L+P AV
Sbjct: 3 VILKETARKLGNVGDVLKVKKGFARNYLIPSGKAV 37
>TIGR_CMR|CJE_0766 [details] [associations]
symbol:CJE_0766 "ribosomal protein L9" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] HAMAP:MF_00503 InterPro:IPR000244 InterPro:IPR020594
Pfam:PF01281 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0359 KO:K02939 Gene3D:3.10.430.100 Gene3D:3.40.5.10
InterPro:IPR009027 InterPro:IPR020069 InterPro:IPR020070
PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658 SUPFAM:SSF55653
TIGRFAMs:TIGR00158 PROSITE:PS00651 ProtClustDB:PRK00137
HOGENOM:HOG000040336 OMA:ITVPDIH RefSeq:YP_178775.1
ProteinModelPortal:Q5HVB0 STRING:Q5HVB0 GeneID:3230718
KEGG:cjr:CJE0766 PATRIC:20043265 BioCyc:CJEJ195099:GJC0-782-MONOMER
Uniprot:Q5HVB0
Length = 147
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 104 KVIRKSEDNMSREFEKAARRLENARLVLRRFPNIEKLRSRESKDVPIE--LRSPVTKEEL 161
+V+RK E + +E E R E A L + + K+ SK V L VTK+E+
Sbjct: 42 EVLRKYESDKKKEAENL--RFEIANLEKLK-EELSKITLEISKPVGANGSLFGGVTKDEI 98
Query: 162 VAEVSRQLSISIEPENLHLPSPLSAFGEYEVPMRLPKAI 200
+ Q I I+ ++L + L + G +EV ++L AI
Sbjct: 99 AHALKEQSHIEIDKKSLECDT-LKSLGIHEVSVKLGHAI 136
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 42 LEVILTTKVDKLGKAGETVKVAPGYFRNHLMPK 74
++V+L V LGKAGE +V GY +N L+ K
Sbjct: 1 MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAK 33
>TIGR_CMR|CBU_0867 [details] [associations]
symbol:CBU_0867 "ribosomal protein L9" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00503 InterPro:IPR000244
InterPro:IPR020594 Pfam:PF01281 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0359 HOGENOM:HOG000040337 KO:K02939 Gene3D:3.10.430.100
Gene3D:3.40.5.10 InterPro:IPR009027 InterPro:IPR020069
InterPro:IPR020070 PANTHER:PTHR21368 Pfam:PF03948 SUPFAM:SSF55658
SUPFAM:SSF55653 TIGRFAMs:TIGR00158 PROSITE:PS00651
ProtClustDB:PRK00137 OMA:TGIYEIE RefSeq:NP_819886.2
ProteinModelPortal:Q83D73 GeneID:1208760 KEGG:cbu:CBU_0867
PATRIC:17930431 BioCyc:CBUR227377:GJ7S-861-MONOMER Uniprot:Q83D73
Length = 152
Score = 103 (41.3 bits), Expect = 0.00025, P = 0.00025
Identities = 44/152 (28%), Positives = 68/152 (44%)
Query: 42 LEVILTTKVDKLGKAGETVKVAPGYFRNHLMPKLLAVP----NIEKF-----------AH 86
+++IL KV LG G+ V V PGY RN L+P AVP +I +F A
Sbjct: 1 MKLILQEKVANLGNIGDQVVVKPGYARNFLLPLGKAVPATPEHIAEFEKQRAELEKAAAE 60
Query: 87 LIREQRRICQPVEEEEVKVIRKSEDNMSREFEKAARRLENARLVLRRFPNIEKLRSRESK 146
L+ + + + +E++ K+ + D R F R E A+ + IEK R +
Sbjct: 61 LLAKAKARAKKLEDKSFKITANASDE-GRLFGSIGPR-EIAQAITEAGIEIEK-REVDLS 117
Query: 147 DVPI-ELRSPVTKEELVAEVSRQLSISIEPEN 177
PI ++ L +VS + I + PEN
Sbjct: 118 QGPIRQVGEYEVPLRLHTDVSVNVKIEVAPEN 149
>POMBASE|SPCC777.17c [details] [associations]
symbol:SPCC777.17c "mitochondrial ribosomal protein
subunit L9 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISM] [GO:0032543
"mitochondrial translation" evidence=ISS] InterPro:IPR000244
Pfam:PF01281 PomBase:SPCC777.17c GO:GO:0005739 EMBL:CU329672
GO:GO:0005840 GO:GO:0003735 GO:GO:0032543 eggNOG:COG0359
Gene3D:3.40.5.10 InterPro:IPR009027 InterPro:IPR020070
PANTHER:PTHR21368 SUPFAM:SSF55658 RefSeq:NP_588259.1
ProteinModelPortal:Q9P801 EnsemblFungi:SPCC777.17c.1 GeneID:2538814
KEGG:spo:SPCC777.17c NextBio:20799996 Uniprot:Q9P801
Length = 101
Score = 90 (36.7 bits), Expect = 0.00062, P = 0.00062
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 45 ILTTKVDKLGKAGETVKVAPGYFRNHLMPK--LLAVPNIEKF-AHLIR 89
+L +V KLG+ G+ V V GY+RN L PK +AV ++ AHL++
Sbjct: 44 LLNNEVSKLGRQGDVVSVTRGYYRNTLFPKKQAIAVDALKSMKAHLLQ 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 218 218 0.00091 112 3 11 22 0.38 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 592 (63 KB)
Total size of DFA: 164 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.69u 0.10s 24.79t Elapsed: 00:00:01
Total cpu time: 24.69u 0.10s 24.79t Elapsed: 00:00:01
Start: Sat May 11 10:38:28 2013 End: Sat May 11 10:38:29 2013