Query 027814
Match_columns 218
No_of_seqs 372 out of 1626
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 15:35:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027814hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.9 1.4E-27 3.1E-32 214.6 10.5 122 71-217 2-125 (371)
2 KOG0713 Molecular chaperone (D 99.9 2.3E-23 4.9E-28 183.8 8.0 76 70-147 13-88 (336)
3 KOG0712 Molecular chaperone (D 99.9 3.2E-22 7E-27 178.0 8.4 74 71-149 2-75 (337)
4 PRK14286 chaperone protein Dna 99.8 7.7E-21 1.7E-25 173.1 11.3 73 72-146 3-75 (372)
5 PRK14288 chaperone protein Dna 99.8 4.7E-21 1E-25 174.3 8.3 72 73-146 3-74 (369)
6 PRK14296 chaperone protein Dna 99.8 7E-21 1.5E-25 173.3 8.0 71 72-145 3-73 (372)
7 PRK14287 chaperone protein Dna 99.8 2.5E-20 5.4E-25 169.7 10.5 72 72-146 3-74 (371)
8 PRK14297 chaperone protein Dna 99.8 2.9E-20 6.3E-25 169.7 10.3 72 72-145 3-74 (380)
9 PRK14276 chaperone protein Dna 99.8 3.1E-20 6.7E-25 169.5 10.3 72 72-146 3-74 (380)
10 KOG0718 Molecular chaperone (D 99.8 2.3E-20 5.1E-25 170.0 9.2 77 70-146 6-83 (546)
11 PRK14282 chaperone protein Dna 99.8 3.8E-20 8.2E-25 168.4 10.3 73 72-145 3-75 (369)
12 PRK14285 chaperone protein Dna 99.8 5.1E-20 1.1E-24 167.3 10.5 71 73-145 3-73 (365)
13 PTZ00037 DnaJ_C chaperone prot 99.8 2.8E-20 6.1E-25 171.6 8.4 70 71-146 26-95 (421)
14 PRK14277 chaperone protein Dna 99.8 9.3E-20 2E-24 166.7 10.8 73 72-146 4-76 (386)
15 PRK14280 chaperone protein Dna 99.8 9.9E-20 2.1E-24 166.0 10.5 72 72-146 3-74 (376)
16 PRK14298 chaperone protein Dna 99.8 9.1E-20 2E-24 166.3 10.0 72 72-146 4-75 (377)
17 PRK14299 chaperone protein Dna 99.8 1.7E-19 3.6E-24 159.4 11.2 71 72-145 3-73 (291)
18 PRK14279 chaperone protein Dna 99.8 6.4E-20 1.4E-24 168.1 7.9 70 72-143 8-77 (392)
19 PRK10767 chaperone protein Dna 99.8 1.5E-19 3.2E-24 164.6 9.8 73 72-146 3-75 (371)
20 KOG0719 Molecular chaperone (D 99.8 2.4E-19 5.3E-24 151.1 8.8 94 70-176 11-104 (264)
21 PRK14301 chaperone protein Dna 99.8 3.6E-19 7.7E-24 162.2 10.3 73 72-146 3-75 (373)
22 PRK14283 chaperone protein Dna 99.8 1.8E-19 4E-24 164.3 8.0 72 71-145 3-74 (378)
23 PRK14294 chaperone protein Dna 99.8 2.3E-19 5.1E-24 163.0 8.6 74 71-146 2-75 (366)
24 PRK14291 chaperone protein Dna 99.8 5.7E-19 1.2E-23 161.3 10.6 72 72-146 2-73 (382)
25 TIGR02349 DnaJ_bact chaperone 99.8 4.8E-19 1E-23 160.2 9.5 70 74-146 1-70 (354)
26 KOG0716 Molecular chaperone (D 99.8 3.3E-19 7.1E-24 153.3 7.5 76 71-148 29-104 (279)
27 PF00226 DnaJ: DnaJ domain; I 99.8 4.2E-19 9.2E-24 122.4 6.7 64 74-138 1-64 (64)
28 PRK14281 chaperone protein Dna 99.8 8.4E-19 1.8E-23 161.0 10.5 72 73-146 3-74 (397)
29 PRK14295 chaperone protein Dna 99.8 5.3E-19 1.1E-23 161.9 8.2 72 72-145 8-83 (389)
30 PRK14284 chaperone protein Dna 99.8 6E-19 1.3E-23 161.6 8.2 71 73-145 1-71 (391)
31 KOG0691 Molecular chaperone (D 99.8 1.2E-18 2.7E-23 153.3 9.6 75 72-148 4-78 (296)
32 PRK10266 curved DNA-binding pr 99.8 2.8E-18 6.2E-23 152.5 11.0 69 72-143 3-71 (306)
33 PRK14278 chaperone protein Dna 99.8 7.6E-19 1.7E-23 160.3 7.0 68 73-143 3-70 (378)
34 PRK14290 chaperone protein Dna 99.8 3.4E-18 7.4E-23 155.4 10.0 72 73-145 3-74 (365)
35 KOG0717 Molecular chaperone (D 99.7 2.1E-18 4.6E-23 157.2 7.4 74 69-143 4-77 (508)
36 PRK14289 chaperone protein Dna 99.7 3.3E-18 7.1E-23 156.5 8.5 72 72-145 4-75 (386)
37 KOG0715 Molecular chaperone (D 99.7 3.2E-18 7E-23 150.9 8.1 72 70-144 40-111 (288)
38 PRK14300 chaperone protein Dna 99.7 3.5E-18 7.6E-23 155.7 7.3 71 73-146 3-73 (372)
39 PRK14292 chaperone protein Dna 99.7 6.2E-18 1.4E-22 153.9 7.6 69 73-144 2-70 (371)
40 PRK14293 chaperone protein Dna 99.7 8.4E-18 1.8E-22 153.2 7.5 71 73-146 3-73 (374)
41 PTZ00341 Ring-infected erythro 99.7 1.1E-17 2.5E-22 163.7 8.8 77 67-146 567-643 (1136)
42 smart00271 DnaJ DnaJ molecular 99.7 7.3E-17 1.6E-21 109.5 6.9 59 73-132 1-59 (60)
43 cd06257 DnaJ DnaJ domain or J- 99.7 2.5E-16 5.5E-21 104.9 6.9 55 74-130 1-55 (55)
44 KOG0721 Molecular chaperone (D 99.6 3.3E-16 7.1E-21 131.1 7.5 79 69-149 95-173 (230)
45 COG2214 CbpA DnaJ-class molecu 99.6 7.9E-16 1.7E-20 126.7 7.8 70 71-141 4-73 (237)
46 TIGR03835 termin_org_DnaJ term 99.6 1.6E-15 3.4E-20 146.0 10.2 70 73-145 2-71 (871)
47 PHA03102 Small T antigen; Revi 99.6 5.6E-16 1.2E-20 124.8 5.1 69 72-146 4-74 (153)
48 PRK01356 hscB co-chaperone Hsc 99.6 6.7E-15 1.4E-19 120.3 7.5 70 73-142 2-74 (166)
49 PRK05014 hscB co-chaperone Hsc 99.6 1.1E-14 2.4E-19 119.5 8.2 70 73-142 1-75 (171)
50 KOG0624 dsRNA-activated protei 99.5 9E-15 1.9E-19 130.5 6.7 75 68-142 389-464 (504)
51 PRK00294 hscB co-chaperone Hsc 99.5 3.7E-14 8.1E-19 116.6 8.5 72 71-142 2-78 (173)
52 PRK03578 hscB co-chaperone Hsc 99.5 5.9E-14 1.3E-18 115.7 8.2 71 72-142 5-80 (176)
53 KOG0720 Molecular chaperone (D 99.4 1.3E-13 2.8E-18 126.1 6.3 70 71-143 233-302 (490)
54 PHA02624 large T antigen; Prov 99.4 4E-13 8.7E-18 127.9 8.3 86 72-177 10-99 (647)
55 KOG0714 Molecular chaperone (D 99.4 1.7E-13 3.7E-18 118.0 5.2 75 72-147 2-76 (306)
56 KOG0722 Molecular chaperone (D 99.4 1.5E-13 3.2E-18 117.7 4.6 74 67-143 27-100 (329)
57 PTZ00100 DnaJ chaperone protei 99.4 5.8E-13 1.3E-17 102.4 5.7 53 71-129 63-115 (116)
58 PRK09430 djlA Dna-J like membr 99.3 1.6E-12 3.5E-17 113.7 5.7 61 70-130 197-262 (267)
59 KOG0550 Molecular chaperone (D 99.3 2.1E-12 4.5E-17 117.4 5.0 72 68-140 368-439 (486)
60 PRK01773 hscB co-chaperone Hsc 99.3 1E-11 2.2E-16 102.2 7.2 74 73-146 2-80 (173)
61 COG5407 SEC63 Preprotein trans 99.2 9.5E-12 2.1E-16 113.9 6.1 77 70-146 95-174 (610)
62 TIGR00714 hscB Fe-S protein as 99.2 2.6E-10 5.7E-15 92.5 10.0 61 84-145 2-65 (157)
63 KOG1150 Predicted molecular ch 99.1 1.5E-10 3.2E-15 96.3 6.6 68 71-139 51-118 (250)
64 COG5269 ZUO1 Ribosome-associat 99.0 5.6E-10 1.2E-14 96.7 7.3 72 69-140 39-113 (379)
65 KOG1789 Endocytosis protein RM 98.4 3.5E-07 7.5E-12 91.3 5.8 57 68-129 1276-1336(2235)
66 KOG0568 Molecular chaperone (D 98.4 2.9E-07 6.4E-12 78.5 4.6 57 71-130 45-102 (342)
67 KOG0723 Molecular chaperone (D 98.3 1.8E-06 3.9E-11 65.1 5.4 57 69-131 52-108 (112)
68 KOG3192 Mitochondrial J-type c 97.7 4.6E-05 9.9E-10 61.4 4.9 72 71-142 6-82 (168)
69 COG1076 DjlA DnaJ-domain-conta 97.0 0.00084 1.8E-08 55.2 3.8 56 73-128 113-173 (174)
70 COG1076 DjlA DnaJ-domain-conta 96.9 0.00086 1.9E-08 55.1 3.1 72 74-145 2-78 (174)
71 KOG0431 Auxilin-like protein a 96.7 0.0019 4.2E-08 60.7 4.7 46 83-128 398-448 (453)
72 PF03656 Pam16: Pam16; InterP 95.3 0.035 7.6E-07 43.5 4.8 58 69-132 54-111 (127)
73 PF13446 RPT: A repeated domai 89.4 0.96 2.1E-05 30.5 4.7 28 72-99 4-31 (62)
74 PF14687 DUF4460: Domain of un 82.4 2.8 6.1E-05 32.1 4.6 49 84-132 5-55 (112)
75 KOG0724 Zuotin and related mol 82.2 1.4 3.1E-05 39.4 3.5 56 85-140 4-61 (335)
76 PF11833 DUF3353: Protein of u 75.2 6.8 0.00015 32.9 5.2 40 82-131 1-40 (194)
77 COG5552 Uncharacterized conser 51.6 71 0.0015 22.8 5.8 32 73-104 3-34 (88)
78 PF07709 SRR: Seven Residue Re 46.3 14 0.0003 17.6 1.1 13 117-129 2-14 (14)
79 KOG3442 Uncharacterized conser 44.3 45 0.00098 26.1 4.3 39 70-108 56-94 (132)
80 PF12434 Malate_DH: Malate deh 31.9 52 0.0011 18.9 2.1 17 87-103 10-26 (28)
81 PHA02602 56 dCTP pyrophosphata 31.2 1.8E+02 0.0039 23.9 6.0 100 72-186 18-120 (172)
82 PF10041 DUF2277: Uncharacteri 30.2 2.1E+02 0.0045 20.5 5.9 33 74-106 4-36 (78)
83 PRK15321 putative type III sec 28.2 2.1E+02 0.0045 21.6 5.4 33 77-109 25-57 (120)
84 PF01846 FF: FF domain; Inter 28.0 1E+02 0.0022 19.3 3.5 48 89-139 1-50 (51)
85 PF07739 TipAS: TipAS antibiot 27.4 1.1E+02 0.0024 22.3 4.1 51 80-141 51-102 (118)
86 PRK14102 nifW nitrogenase stab 24.8 2.1E+02 0.0045 21.7 5.0 57 71-128 13-75 (105)
87 COG5432 RAD18 RING-finger-cont 21.8 5.2E+02 0.011 23.4 7.6 26 161-186 317-342 (391)
88 PF08447 PAS_3: PAS fold; Int 21.7 35 0.00077 23.2 0.3 29 72-104 5-34 (91)
89 cd01388 SOX-TCF_HMG-box SOX-TC 21.2 1.9E+02 0.004 19.5 3.9 41 92-139 14-54 (72)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.4e-27 Score=214.64 Aligned_cols=122 Identities=34% Similarity=0.598 Sum_probs=94.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc-cc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI-AF 149 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~-~~ 149 (218)
..+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||++|+.||+++..+... .+
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~--~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~ 79 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD--KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGF 79 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCc
Confidence 468999999999999999999999999999999999864 589999999999999999999999999999998752 11
Q ss_pred cCCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHhCcCCCCCCCchhhhhhhccccCCCCccccccccc
Q 027814 150 SSRKPSRYKEGLDDYG-TWRIRWQSQLTELKRRSMNKDSRDHMSWGSRIRRRHRSKTTADDIDRNSTIK 217 (218)
Q Consensus 150 ~~~~~~~~~e~~~~~~-~w~~~~~~~~~e~~~r~~~~~~~~~~~~g~r~r~~r~~~~~~~~~~~~~~~~ 217 (218)
.+. .|.+++ ++.+.|...|. .|++.|++++.+..++||..+.+|.
T Consensus 80 gg~-------g~~~fgg~~~DIF~~~Fg----------------Gg~~~~~~~~~~~rG~Dl~~~l~is 125 (371)
T COG0484 80 GGF-------GFGGFGGDFGDIFEDFFG----------------GGGGGRRRPNRPRRGADLRYNLEIT 125 (371)
T ss_pred CCC-------CcCCCCCCHHHHHHHhhc----------------CCCcccCCCCCcccCCceEEEEEeE
Confidence 111 222222 34555544441 1222455666688999999998875
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2.3e-23 Score=183.83 Aligned_cols=76 Identities=42% Similarity=0.759 Sum_probs=71.6
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI 147 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 147 (218)
...+|||+||||+++|+..|||+|||+||++||||+|+++ +.|.+.|+.|+.||+||+||++|+.||.+|.+|+..
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd--p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD--PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 4568999999999999999999999999999999999988 689999999999999999999999999999988763
No 3
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=3.2e-22 Score=177.97 Aligned_cols=74 Identities=39% Similarity=0.699 Sum_probs=68.3
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcccc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIAF 149 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~~ 149 (218)
....||+||||+++|+.+|||+|||+|+++||||||+. +.++|++|.+||+||+||++|..||+++.++.....
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~-----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~ 75 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD-----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGG 75 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc-----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccC
Confidence 45789999999999999999999999999999999986 568999999999999999999999999999885443
No 4
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=7.7e-21 Score=173.07 Aligned_cols=73 Identities=41% Similarity=0.735 Sum_probs=67.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ .++.++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN--KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVN 75 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhc
Confidence 47999999999999999999999999999999998754 46889999999999999999999999999887653
No 5
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=4.7e-21 Score=174.26 Aligned_cols=72 Identities=38% Similarity=0.647 Sum_probs=66.5
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
.|||+||||+++|+.+|||+|||+|+++||||+++.+ .+++++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~--~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~ 74 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD--KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN 74 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccc
Confidence 6999999999999999999999999999999999754 36889999999999999999999999999877553
No 6
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=7e-21 Score=173.34 Aligned_cols=71 Identities=28% Similarity=0.631 Sum_probs=65.9
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..+.++|++|++||+||+||++|+.||+++..++
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~---~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~ 73 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS---PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhh
Confidence 4799999999999999999999999999999999864 3678999999999999999999999999987654
No 7
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=2.5e-20 Score=169.67 Aligned_cols=72 Identities=38% Similarity=0.723 Sum_probs=66.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++. ++++++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~ 74 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPN 74 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccc
Confidence 4699999999999999999999999999999999864 36778999999999999999999999999887653
No 8
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=2.9e-20 Score=169.69 Aligned_cols=72 Identities=35% Similarity=0.718 Sum_probs=66.7
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..|||+||||+++|+.++||+|||+|+++||||+++.. .+++++|++|++||+||+||.+|+.||+++..++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~ 74 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN--KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF 74 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccc
Confidence 36999999999999999999999999999999999754 4688999999999999999999999999988765
No 9
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=3.1e-20 Score=169.55 Aligned_cols=72 Identities=43% Similarity=0.748 Sum_probs=66.5
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .+.++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~ 74 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP---GAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN 74 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---CHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcccc
Confidence 47999999999999999999999999999999998743 5778999999999999999999999999987654
No 10
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=2.3e-20 Score=170.04 Aligned_cols=77 Identities=40% Similarity=0.684 Sum_probs=71.9
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCC-CchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSP-PERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~-~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..+.+||.+|+|+++|+.+|||+|||++++.|||||.. ++.++.|++.|+.|.+|||||+||.+|+.||.+|.+|+.
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 35569999999999999999999999999999999985 566778999999999999999999999999999999986
No 11
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=3.8e-20 Score=168.36 Aligned_cols=73 Identities=45% Similarity=0.837 Sum_probs=66.5
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++... .+++++|++|++||+||+||.+|+.||+++..+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~ 75 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENR-KEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE 75 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccch-hHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence 479999999999999999999999999999999986532 3578999999999999999999999999987654
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=5.1e-20 Score=167.32 Aligned_cols=71 Identities=38% Similarity=0.660 Sum_probs=66.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
.|||+||||+++|+.+|||+|||+|+++||||+++.. +++.++|++|++||+||+||.+|..||+++..++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~ 73 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN--KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF 73 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchh
Confidence 6999999999999999999999999999999998754 4678899999999999999999999999988765
No 13
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.81 E-value=2.8e-20 Score=171.60 Aligned_cols=70 Identities=37% Similarity=0.662 Sum_probs=64.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...|||+||||+++|+.+|||+|||+|+++||||+++. .++|++|++||+||+||.+|+.||.++..++.
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~ 95 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLE 95 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHHHHHHhhhcchhcc
Confidence 45799999999999999999999999999999999853 27999999999999999999999999877653
No 14
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=9.3e-20 Score=166.69 Aligned_cols=73 Identities=41% Similarity=0.761 Sum_probs=67.0
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .+++++|++|++||+||+||.+|+.||+++..++.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 76 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD--KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFD 76 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccc
Confidence 46999999999999999999999999999999999754 46789999999999999999999999999877653
No 15
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=9.9e-20 Score=166.01 Aligned_cols=72 Identities=40% Similarity=0.726 Sum_probs=66.4
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.++||+|||+|+++||||+++.. .+.++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 74 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE---GADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPN 74 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhccHhHHHHHHhcCccccc
Confidence 36999999999999999999999999999999998753 5789999999999999999999999999887654
No 16
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=9.1e-20 Score=166.31 Aligned_cols=72 Identities=36% Similarity=0.698 Sum_probs=66.1
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..+.++|++|++||+||+||.+|+.||+++..++.
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccc
Confidence 4699999999999999999999999999999999864 36778999999999999999999999999877653
No 17
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=1.7e-19 Score=159.39 Aligned_cols=71 Identities=39% Similarity=0.755 Sum_probs=65.6
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..+.++|++|++||+||+||.+|..||+++..+.
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~ 73 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAA 73 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccc
Confidence 4799999999999999999999999999999999864 3678899999999999999999999999988754
No 18
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=6.4e-20 Score=168.06 Aligned_cols=70 Identities=36% Similarity=0.641 Sum_probs=65.0
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
.+|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||+||+||++|+.||+++..
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~ 77 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD--PAAEERFKAVSEAHDVLSDPAKRKEYDETRRL 77 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhh
Confidence 47999999999999999999999999999999999754 46789999999999999999999999999753
No 19
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=1.5e-19 Score=164.59 Aligned_cols=73 Identities=40% Similarity=0.755 Sum_probs=66.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.++||+|||+|+++||||+++.. ..+.++|++|++||++|+||.+|..||+++..++.
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD--KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccc
Confidence 47999999999999999999999999999999998754 35788999999999999999999999999877653
No 20
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=2.4e-19 Score=151.15 Aligned_cols=94 Identities=34% Similarity=0.586 Sum_probs=82.0
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcccc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIAF 149 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~~ 149 (218)
+...|+|+||||..+|+..+|++||++|++++|||+++.....++++.|+.|+.||.||+|.++|+.||..|.-.
T Consensus 11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id----- 85 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID----- 85 (264)
T ss_pred ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC-----
Confidence 455699999999999999999999999999999999987777899999999999999999999999999976432
Q ss_pred cCCCCCCCCCCCCCchhHHHHHHHHHH
Q 027814 150 SSRKPSRYKEGLDDYGTWRIRWQSQLT 176 (218)
Q Consensus 150 ~~~~~~~~~e~~~~~~~w~~~~~~~~~ 176 (218)
++.-+-..+|.++|+..+.
T Consensus 86 --------d~~~d~~~~~~e~~~~iyk 104 (264)
T KOG0719|consen 86 --------DESGDIDEDWLEFWRAIYK 104 (264)
T ss_pred --------CccchhhhHHHHHHHHHHh
Confidence 3333446789999998776
No 21
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=3.6e-19 Score=162.20 Aligned_cols=73 Identities=38% Similarity=0.716 Sum_probs=67.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.++||+|||+|+++||||+++.. .+++++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~ 75 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN--PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVN 75 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC--hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccc
Confidence 47999999999999999999999999999999999754 46788999999999999999999999999887653
No 22
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.8e-19 Score=164.34 Aligned_cols=72 Identities=38% Similarity=0.705 Sum_probs=66.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
...|||+||||+++|+.+|||+|||+|+++||||+++. ..+.++|++|++||+||+||.+|+.||+++..|+
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~ 74 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM 74 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHHHHHHhhhccccc
Confidence 35799999999999999999999999999999999874 3678999999999999999999999999988765
No 23
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=2.3e-19 Score=163.02 Aligned_cols=74 Identities=38% Similarity=0.738 Sum_probs=67.6
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...|||+||||+++|+.+|||+|||+|+++||||+++.. .++.++|++|++||+||+||.+|+.||+++..++.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~--~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~ 75 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD--KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS 75 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHhccHHHHHHHHhhcccccc
Confidence 347999999999999999999999999999999999754 36788999999999999999999999999987653
No 24
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=5.7e-19 Score=161.33 Aligned_cols=72 Identities=39% Similarity=0.731 Sum_probs=66.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..|||+||||+++|+.++||+|||+|+++||||+++. ..+.++|++|++||+||+||.+|+.||.++..+..
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~ 73 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN---PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFS 73 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccc
Confidence 3699999999999999999999999999999999975 36778999999999999999999999999887653
No 25
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.78 E-value=4.8e-19 Score=160.22 Aligned_cols=70 Identities=41% Similarity=0.758 Sum_probs=64.7
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 74 SFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 74 d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
|||+||||+++|+.++||+||++|+++||||+++. ..+.++|++|++||+||+||.+|..||.++..+..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~ 70 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD---KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhhChHHHHhhhhccccccc
Confidence 79999999999999999999999999999999973 35778999999999999999999999999887653
No 26
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=3.3e-19 Score=153.33 Aligned_cols=76 Identities=42% Similarity=0.717 Sum_probs=70.4
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
...++|+||||+++|+.++||++||+|+++||||+++++ +++.++|++||+||+||+||.+|..||++|..|+...
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~l~ 104 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLKLA 104 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHHHH
Confidence 368999999999999999999999999999999999886 5788999999999999999999999999988877544
No 27
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.78 E-value=4.2e-19 Score=122.39 Aligned_cols=64 Identities=44% Similarity=0.833 Sum_probs=60.2
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHH
Q 027814 74 SFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYD 138 (218)
Q Consensus 74 d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 138 (218)
|||+||||+++++.++||++|+++++++|||+++... ..+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987664 468899999999999999999999998
No 28
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=8.4e-19 Score=160.96 Aligned_cols=72 Identities=40% Similarity=0.727 Sum_probs=66.5
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
.|||+||||+++|+.++||+|||+|+++||||+++.. ..+.++|++|++||+||+||.+|+.||+++..++.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~ 74 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN--KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVG 74 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhc
Confidence 6999999999999999999999999999999999754 46789999999999999999999999999887654
No 29
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5.3e-19 Score=161.89 Aligned_cols=72 Identities=38% Similarity=0.710 Sum_probs=66.0
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHh----hhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDN----HLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~----~~~~~~ 145 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .++.++|++|++||+||+||.+|+.||+ ++..++
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~ 83 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD--AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGF 83 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc--hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccc
Confidence 46999999999999999999999999999999998754 4688999999999999999999999999 776655
No 30
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=6e-19 Score=161.62 Aligned_cols=71 Identities=44% Similarity=0.811 Sum_probs=65.7
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
.|||+||||+++|+.++||+|||+|+++||||+++.. ..+.++|++|++||+||+||.+|+.||+++..++
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD--AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 4899999999999999999999999999999999754 4688999999999999999999999999987654
No 31
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=1.2e-18 Score=153.33 Aligned_cols=75 Identities=44% Similarity=0.755 Sum_probs=70.1
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
..|||+||||+.+++..+|++||+..+++|||||||++. .|.+.|+.|.+||+||+|+..|..||.++..+....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP--~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~ 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDP--QAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch
Confidence 679999999999999999999999999999999999884 588999999999999999999999999998877544
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.76 E-value=2.8e-18 Score=152.48 Aligned_cols=69 Identities=38% Similarity=0.652 Sum_probs=63.6
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
..|||+||||+++|+.++||+|||+|+++||||+++.. .+.++|++|++||++|+||.+|+.||.++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~---~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP---DAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 36999999999999999999999999999999998643 6789999999999999999999999998743
No 33
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=7.6e-19 Score=160.29 Aligned_cols=68 Identities=38% Similarity=0.707 Sum_probs=63.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
.|||+||||+++|+.++||+|||+|+++||||+++. +++.++|++|++||+||+||.+|..||+++..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 699999999999999999999999999999999974 36789999999999999999999999998865
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=3.4e-18 Score=155.37 Aligned_cols=72 Identities=35% Similarity=0.703 Sum_probs=66.2
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
.|||+||||+++|+.+|||+|||+|+++||||+++.. ...+.++|++|++||+||+||.+|..||.++..++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~ 74 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN-KAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF 74 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccc
Confidence 6999999999999999999999999999999998654 23688999999999999999999999999988765
No 35
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=2.1e-18 Score=157.17 Aligned_cols=74 Identities=42% Similarity=0.791 Sum_probs=68.2
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
+...+.||+||||..+|+..+||++||+||++||||++|+. .+++++.|+.|+.||+|||||..|+.||.+..+
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~-ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR-IEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc-HHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 34678999999999999999999999999999999998664 478999999999999999999999999998774
No 36
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.74 E-value=3.3e-18 Score=156.50 Aligned_cols=72 Identities=38% Similarity=0.762 Sum_probs=66.7
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .++.++|++|++||++|+||.+|+.||+++..+.
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~ 75 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD--KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHhccccc
Confidence 47999999999999999999999999999999999754 4688999999999999999999999999987654
No 37
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=3.2e-18 Score=150.93 Aligned_cols=72 Identities=40% Similarity=0.666 Sum_probs=67.1
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcC
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATG 144 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 144 (218)
....|||+||||+++|+..|||+||++|+++||||.+... ++.++|++|.+||+||+|+++|..||.++..+
T Consensus 40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~---~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK---EASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc---chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3444999999999999999999999999999999999776 88899999999999999999999999998876
No 38
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=3.5e-18 Score=155.66 Aligned_cols=71 Identities=30% Similarity=0.634 Sum_probs=65.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
.|||+||||+++|+.+|||+|||+|+++||||+++.. .++++|++|++||++|+||.+|+.||+++..++.
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 73 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAK---DAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQ 73 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---CHHHHHHHHHHHHHHhhhHhHhhHHHhccccccc
Confidence 6999999999999999999999999999999998643 5778999999999999999999999999877653
No 39
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=6.2e-18 Score=153.90 Aligned_cols=69 Identities=39% Similarity=0.728 Sum_probs=64.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATG 144 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 144 (218)
.|||+||||+++|+.++||+||++|+++||||+++. ..+.++|++|++||+||+||.+|+.||.++..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~---~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE---KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 599999999999999999999999999999999974 367899999999999999999999999998765
No 40
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.72 E-value=8.4e-18 Score=153.25 Aligned_cols=71 Identities=41% Similarity=0.745 Sum_probs=65.4
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
.|||+||||+++|+.++||+|||+|+++||||+++.. .+.++|+.|++||+||+||.+|+.||.++..++.
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~ 73 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP---GAEDRFKEINRAYEVLSDPETRARYDQFGEAGVS 73 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHHHHHHHhchHHHHHHhhccccccc
Confidence 6999999999999999999999999999999998743 5778999999999999999999999999877553
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.72 E-value=1.1e-17 Score=163.74 Aligned_cols=77 Identities=26% Similarity=0.490 Sum_probs=69.9
Q ss_pred ccCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 67 SLSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 67 ~~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...+...+||+||||+++|+..+||+|||+||++||||+++.. .+.++|+.|++||+||+||.+|+.||.+|..|+.
T Consensus 567 t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 567 TIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3445678999999999999999999999999999999999764 5778999999999999999999999999988764
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.69 E-value=7.3e-17 Score=109.48 Aligned_cols=59 Identities=46% Similarity=0.934 Sum_probs=54.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChh
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPN 132 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~ 132 (218)
.+||+||||+++++.++||++|+++++.+|||+++.. ...+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999998753 3578899999999999999985
No 43
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.66 E-value=2.5e-16 Score=104.90 Aligned_cols=55 Identities=49% Similarity=0.965 Sum_probs=51.3
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCC
Q 027814 74 SFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSD 130 (218)
Q Consensus 74 d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsd 130 (218)
|||+||||+++++.++||++|++|++++|||+++.. ..+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 699999999999999999999999999999998764 4678999999999999986
No 44
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=3.3e-16 Score=131.07 Aligned_cols=79 Identities=30% Similarity=0.557 Sum_probs=70.7
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
....-|+|+||||+++++..|||+|||+|+++|||||++++ ++.++.|..|.+||+.|+|+..|..|..+|......+
T Consensus 95 ~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGpq~ 172 (230)
T KOG0721|consen 95 ERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGPQA 172 (230)
T ss_pred HhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCccc
Confidence 34567999999999999999999999999999999999875 4677889999999999999999999999998866544
Q ss_pred c
Q 027814 149 F 149 (218)
Q Consensus 149 ~ 149 (218)
.
T Consensus 173 ~ 173 (230)
T KOG0721|consen 173 T 173 (230)
T ss_pred h
Confidence 3
No 45
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=7.9e-16 Score=126.73 Aligned_cols=70 Identities=43% Similarity=0.768 Sum_probs=64.7
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhh
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHL 141 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 141 (218)
...+||+||||+++|+..+|+++|++++++||||+++.... .+.+.|+.|++||++|+|+.+|..||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 45799999999999999999999999999999999987643 58899999999999999999999999974
No 46
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.62 E-value=1.6e-15 Score=146.02 Aligned_cols=70 Identities=36% Similarity=0.658 Sum_probs=64.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
.|||+||||+++|+.++||++||+|+++||||+++. ..+.++|++|++||++|+||.+|..||.++..|.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~---~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA---PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 599999999999999999999999999999999875 3667899999999999999999999999987654
No 47
>PHA03102 Small T antigen; Reviewed
Probab=99.61 E-value=5.6e-16 Score=124.75 Aligned_cols=69 Identities=23% Similarity=0.393 Sum_probs=62.5
Q ss_pred CcchhhhcCCCCCC--CHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 72 TESFYDLLGIPQSV--TPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 72 ~~d~Y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...+|+||||+++| +.++||+|||++++++|||+++.+ ++|++|++||++|+|+.+|..||.++..+..
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~------e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~ 74 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDE------EKMKELNTLYKKFRESVKSLRDLDGEEDSSS 74 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchh------HHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence 35789999999999 999999999999999999997543 6899999999999999999999999876543
No 48
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.56 E-value=6.7e-15 Score=120.31 Aligned_cols=70 Identities=31% Similarity=0.523 Sum_probs=60.6
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCc-hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 73 ESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPE-RIDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 73 ~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~-~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
.|||+||||++. ++..+|+++|++|++++|||++... .+..+.+.+..||+||+||+||.+|+.|+..+.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l~ 74 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLLQ 74 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHcc
Confidence 589999999996 7899999999999999999998543 223345678999999999999999999998775
No 49
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.56 E-value=1.1e-14 Score=119.53 Aligned_cols=70 Identities=24% Similarity=0.446 Sum_probs=60.4
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCc---hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 73 ESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPE---RIDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 73 ~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
.|||+||||++. ++..+|+++|+++++++|||+.... ....+.+.|..||+||+||+||.+|+.|+-.+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~l~ 75 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLSLH 75 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHHhc
Confidence 489999999996 6889999999999999999996533 223467899999999999999999999997665
No 50
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.54 E-value=9e-15 Score=130.47 Aligned_cols=75 Identities=33% Similarity=0.610 Sum_probs=67.6
Q ss_pred cCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCch-hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 68 LSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPER-IDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
.....+|||+||||.++|+..||.+|||+++.+||||...+++ +..|+.+|..|..|-+||+||++|..||+.-.
T Consensus 389 kqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeD 464 (504)
T KOG0624|consen 389 KQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGED 464 (504)
T ss_pred HHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCC
Confidence 3467899999999999999999999999999999999876554 66789999999999999999999999998533
No 51
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.52 E-value=3.7e-14 Score=116.60 Aligned_cols=72 Identities=28% Similarity=0.395 Sum_probs=62.7
Q ss_pred CCcchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCch---hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 71 ATESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPER---IDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
...+||++|||++. ++..+|+++|++|++++|||++.... +..+.+.|..||+||+||+||.+|+.|+-.+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l~ 78 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALS 78 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 56899999999997 57899999999999999999975432 23467889999999999999999999998775
No 52
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=5.9e-14 Score=115.72 Aligned_cols=71 Identities=30% Similarity=0.483 Sum_probs=60.4
Q ss_pred CcchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCch---hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 72 TESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPER---IDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 72 ~~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
..|||+||||++. ++..+|+++|++|++++|||++.... +..+.+.+..||+||++|+||.+|+.|+-.+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~ 80 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLR 80 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhc
Confidence 4799999999985 68999999999999999999975432 12345667999999999999999999998665
No 53
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.3e-13 Score=126.12 Aligned_cols=70 Identities=27% Similarity=0.475 Sum_probs=65.4
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
+..|+|.+|||+.+++.++||+.||++|..+|||||-.+ .|++.|+.|+.||++|+|+++|..||..+..
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~---~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP---RAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh---hHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 478999999999999999999999999999999999744 8889999999999999999999999997664
No 54
>PHA02624 large T antigen; Provisional
Probab=99.42 E-value=4e-13 Score=127.85 Aligned_cols=86 Identities=21% Similarity=0.378 Sum_probs=69.1
Q ss_pred CcchhhhcCCCCCC--CHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHH--hhhhcCCcc
Q 027814 72 TESFYDLLGIPQSV--TPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYD--NHLATGSFI 147 (218)
Q Consensus 72 ~~d~Y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD--~~~~~~~~~ 147 (218)
..++|+||||+++| +.++||+|||+++++||||+++. .++|++|++||++|+|+.++..|. ..-..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd------eekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~--- 80 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD------EEKMKRLNSLYKKLQEGVKSARQSFGTQDSSE--- 80 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc------HHHHHHHHHHHHHHhcHHHhhhcccccccccC---
Confidence 46899999999999 99999999999999999999743 368999999999999999999994 210000
Q ss_pred cccCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 027814 148 AFSSRKPSRYKEGLDDYGTWRIRWQSQLTE 177 (218)
Q Consensus 148 ~~~~~~~~~~~e~~~~~~~w~~~~~~~~~e 177 (218)
..-++...|+.+|+.....
T Consensus 81 -----------v~~~~~~~w~~ww~~f~~k 99 (647)
T PHA02624 81 -----------IPTYGTPEWEQWWEEFNEK 99 (647)
T ss_pred -----------CCCCccccHHHHHHHhhhh
Confidence 0112566799999887743
No 55
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=1.7e-13 Score=117.98 Aligned_cols=75 Identities=40% Similarity=0.718 Sum_probs=67.9
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI 147 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 147 (218)
..|||+||||.++|+..+|++||+++++++|||+++.. ...+..+|++|.+||++|+|+.+|..||.++..+...
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~ 76 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKG 76 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHhhhccccCcccccc
Confidence 36999999999999999999999999999999998877 6667679999999999999999999999999855543
No 56
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.41 E-value=1.5e-13 Score=117.71 Aligned_cols=74 Identities=36% Similarity=0.634 Sum_probs=67.4
Q ss_pred ccCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 67 SLSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 67 ~~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
.+-+...|.|+||||.++++..+|.+|||+|+++||||++++. +..+.|..|..||++|.|.+.|..||-.+..
T Consensus 27 gLYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~---e~k~~F~~iAtayeilkd~e~rt~ydyaldh 100 (329)
T KOG0722|consen 27 GLYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP---ESKKLFVKIATAYEILKDNETRTQYDYALDH 100 (329)
T ss_pred hhcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc---hhhhhhhhhhcccccccchhhHHhHHHHhcC
Confidence 3567889999999999999999999999999999999999876 5558999999999999999999999987654
No 57
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.38 E-value=5.8e-13 Score=102.40 Aligned_cols=53 Identities=26% Similarity=0.411 Sum_probs=47.6
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLS 129 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLs 129 (218)
...++|+||||+++++.++|+++|++|++++|||+++.. +.|++|++||++|.
T Consensus 63 s~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs~------~~~~kIneAyevL~ 115 (116)
T PTZ00100 63 SKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGST------YIASKVNEAKDLLL 115 (116)
T ss_pred CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH------HHHHHHHHHHHHHh
Confidence 457999999999999999999999999999999986432 57899999999985
No 58
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.32 E-value=1.6e-12 Score=113.74 Aligned_cols=61 Identities=33% Similarity=0.560 Sum_probs=53.4
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CchhhHHHHHHHHHHHHHHHcCC
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSP-----PERIDENTKRFIRLQEAYETLSD 130 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~-----~~~~~~a~~~f~~I~~AY~vLsd 130 (218)
....++|+||||++++|.++||++||+|+++||||+.. ++..+.++++|++|++||++|+.
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 45589999999999999999999999999999999963 22235688999999999999985
No 59
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=2.1e-12 Score=117.38 Aligned_cols=72 Identities=35% Similarity=0.606 Sum_probs=66.3
Q ss_pred cCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhh
Q 027814 68 LSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNH 140 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 140 (218)
...+..|||.||||..+++..+||++|+++++.+|||++... +.+++.+|++|.+||.+|+||.+|..||..
T Consensus 368 kkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 368 KKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred HHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 446789999999999999999999999999999999998766 468889999999999999999999999974
No 60
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.27 E-value=1e-11 Score=102.17 Aligned_cols=74 Identities=22% Similarity=0.271 Sum_probs=63.3
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCc---hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 73 ESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPE---RIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 73 ~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
.|||++|||++. .+...|++.|++|.+++|||+.... .+..+.+....||+||.||+||.+|+.|=-.+..|..
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~~g~~ 80 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALNTGEQ 80 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhccCCC
Confidence 599999999996 7999999999999999999986433 2334667889999999999999999999988775543
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.24 E-value=9.5e-12 Score=113.86 Aligned_cols=77 Identities=34% Similarity=0.546 Sum_probs=70.3
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCC---chhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPP---ERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~---~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
..--|+||||||+.+++..+||++||+|+.+|||||.++ +..++.++.+.+|++||..|+|...|..|-.+|.....
T Consensus 95 ~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~p 174 (610)
T COG5407 95 RRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSP 174 (610)
T ss_pred HcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCC
Confidence 456799999999999999999999999999999999876 66678899999999999999999999999999877554
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.16 E-value=2.6e-10 Score=92.47 Aligned_cols=61 Identities=30% Similarity=0.429 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCc---hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 84 SVTPREIKQAYKHLVLKYHPDVSPPE---RIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 84 ~as~~eIk~aYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
..+..+|+++|++|++++|||+.... .+..+.+.|..||+||+||+||.+|+.|+-.+. |.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~-g~ 65 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH-GI 65 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc-CC
Confidence 35789999999999999999986433 233477899999999999999999999999877 44
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.5e-10 Score=96.29 Aligned_cols=68 Identities=26% Similarity=0.450 Sum_probs=60.6
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHh
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDN 139 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 139 (218)
-..|+|+||.|.|..+.++||+.||+|++..|||+|+++. +.|...|..|.+||..|-|+..|..-+.
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~-~rAqkAFdivkKA~k~l~n~~~rkr~~~ 118 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDA-ERAQKAFDIVKKAYKLLENDKIRKRCLD 118 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccH-HHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 3579999999999999999999999999999999998763 5788899999999999999987665554
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=5.6e-10 Score=96.73 Aligned_cols=72 Identities=32% Similarity=0.463 Sum_probs=62.3
Q ss_pred CCCCcchhhhcCCCC---CCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhh
Q 027814 69 SAATESFYDLLGIPQ---SVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNH 140 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~---~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 140 (218)
..+..|+|.+|||+. .++..+|.++.++.+.+||||+........+.+.|..|+.||+||+|+.+|..||.-
T Consensus 39 ~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 39 NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 456789999999986 688999999999999999999973332246678999999999999999999999974
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=3.5e-07 Score=91.27 Aligned_cols=57 Identities=32% Similarity=0.571 Sum_probs=49.1
Q ss_pred cCCCCcchhhhcCCCCC----CCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcC
Q 027814 68 LSAATESFYDLLGIPQS----VTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLS 129 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~----as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLs 129 (218)
+.+...+.|+||.|+-+ -..++||++|++|+.+|||||||.. .++|..||+||+.|+
T Consensus 1276 ~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEG-----RemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1276 ATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEG-----REMFERVNKAYELLS 1336 (2235)
T ss_pred CccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchH-----HHHHHHHHHHHHHHH
Confidence 44667789999999753 3568999999999999999999744 589999999999998
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=2.9e-07 Score=78.47 Aligned_cols=57 Identities=26% Similarity=0.610 Sum_probs=49.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHH-HcCC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYE-TLSD 130 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~-vLsd 130 (218)
.-..||.||||..+|+.++++.+|..|++++|||..... ...+.|.+|.+||. ||..
T Consensus 45 ~~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~---adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 45 KIMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE---ADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc---ccHHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999987654 45578999999998 7753
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=1.8e-06 Score=65.12 Aligned_cols=57 Identities=23% Similarity=0.321 Sum_probs=49.3
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCCh
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDP 131 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp 131 (218)
.+.....-.||||.+.++.+.||+++|++....|||+.+.+ -.-.+||+|+++|...
T Consensus 52 kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 52 KMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP------YLASKINEAKDLLEGT 108 (112)
T ss_pred ccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH------HHHHHHHHHHHHHhcc
Confidence 34566788899999999999999999999999999999776 4557899999999753
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.75 E-value=4.6e-05 Score=61.35 Aligned_cols=72 Identities=31% Similarity=0.576 Sum_probs=57.2
Q ss_pred CCcchhhhcCCCC--CCCHHHHHHHHHHHHHHcCCCCCCCc---hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 71 ATESFYDLLGIPQ--SVTPREIKQAYKHLVLKYHPDVSPPE---RIDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 71 ~~~d~Y~iLgv~~--~as~~eIk~aYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
...+||.++|... ..++..++..|....++.|||+.... ....+.+...+||+||.+|.||..|+.|=..+.
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4578999998764 45677788789999999999984221 113567889999999999999999999987654
No 69
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.96 E-value=0.00084 Score=55.19 Aligned_cols=56 Identities=32% Similarity=0.541 Sum_probs=47.8
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCC-----CCchhhHHHHHHHHHHHHHHHc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVS-----PPERIDENTKRFIRLQEAYETL 128 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~-----~~~~~~~a~~~f~~I~~AY~vL 128 (218)
.+.|.+||+...+...+|+++|+++...+|||+. +..-.+.+.+.+++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999973 2222356788899999999854
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.86 E-value=0.00086 Score=55.11 Aligned_cols=72 Identities=31% Similarity=0.445 Sum_probs=56.8
Q ss_pred chhhhcCCCCCC--CHHHHHHHHHHHHHHcCCCCCCCc---hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 74 SFYDLLGIPQSV--TPREIKQAYKHLVLKYHPDVSPPE---RIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 74 d~Y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~---~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
+++.++|+++.+ ..+.++..|+.+.+.||||+.... ....+.+.+..++.||.+|.||.+|+.|=..+..|.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g~ 78 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADGL 78 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcccc
Confidence 455666666644 566799999999999999986432 223366789999999999999999999998887665
No 71
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.72 E-value=0.0019 Score=60.66 Aligned_cols=46 Identities=35% Similarity=0.486 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCCc-----hhhHHHHHHHHHHHHHHHc
Q 027814 83 QSVTPREIKQAYKHLVLKYHPDVSPPE-----RIDENTKRFIRLQEAYETL 128 (218)
Q Consensus 83 ~~as~~eIk~aYr~l~~~~HPDk~~~~-----~~~~a~~~f~~I~~AY~vL 128 (218)
.-++.++||++||+.++.+||||..+. .+-.+++.|..+++|++..
T Consensus 398 DLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 398 DLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred hccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 356899999999999999999997543 1234566677777777654
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=95.27 E-value=0.035 Score=43.55 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=40.3
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChh
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPN 132 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~ 132 (218)
.+.......||||++..+.++|.+.|..|-...+|++++.. -.=.+|..|.+.|....
T Consensus 54 ~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf------YLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 54 GMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSF------YLQSKVFRAKERLEQEL 111 (127)
T ss_dssp ---HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H------HHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH------HHHHHHHHHHHHHHHHH
Confidence 35556789999999999999999999999999999987643 33456888888886443
No 73
>PF13446 RPT: A repeated domain in UCH-protein
Probab=89.39 E-value=0.96 Score=30.50 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=25.5
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHH
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVL 99 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~ 99 (218)
-.+.|++|||+++.+.+.|-.+|.....
T Consensus 4 ~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 4 VEEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999877
No 74
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=82.41 E-value=2.8 Score=32.09 Aligned_cols=49 Identities=18% Similarity=0.379 Sum_probs=36.8
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCC--CchhhHHHHHHHHHHHHHHHcCChh
Q 027814 84 SVTPREIKQAYKHLVLKYHPDVSP--PERIDENTKRFIRLQEAYETLSDPN 132 (218)
Q Consensus 84 ~as~~eIk~aYr~l~~~~HPDk~~--~~~~~~a~~~f~~I~~AY~vLsdp~ 132 (218)
..+..+++.+.|.+-+++|||... +..+...++-++.|+.-.+.|..+.
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 456778999999999999999643 3344556677888888888777653
No 75
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.22 E-value=1.4 Score=39.40 Aligned_cols=56 Identities=23% Similarity=0.365 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCC--chhhHHHHHHHHHHHHHHHcCChhhHHHHHhh
Q 027814 85 VTPREIKQAYKHLVLKYHPDVSPP--ERIDENTKRFIRLQEAYETLSDPNTRALYDNH 140 (218)
Q Consensus 85 as~~eIk~aYr~l~~~~HPDk~~~--~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~ 140 (218)
++..+|..+|+..++..||++... .......+.|+.|.+||.||.+.+.|..+|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 567789999999999999997642 11123456799999999999986655555554
No 76
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=75.24 E-value=6.8 Score=32.86 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCCh
Q 027814 82 PQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDP 131 (218)
Q Consensus 82 ~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp 131 (218)
+++|+.+||++|+.++..+|--| .+.-..|..||+.+.=.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd----------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD----------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHHHHH
Confidence 46899999999999999999333 13466788999886533
No 77
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=51.61 E-value=71 Score=22.85 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=26.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPD 104 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPD 104 (218)
++--+++|+++-|+..||+.+-++.+++..=-
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGt 34 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGT 34 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCC
Confidence 45667899999999999999998888886433
No 78
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=46.30 E-value=14 Score=17.64 Aligned_cols=13 Identities=46% Similarity=0.869 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHcC
Q 027814 117 RFIRLQEAYETLS 129 (218)
Q Consensus 117 ~f~~I~~AY~vLs 129 (218)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888774
No 79
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.34 E-value=45 Score=26.14 Aligned_cols=39 Identities=15% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCC
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPP 108 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~ 108 (218)
+.-...-.||+|....+.++|.+.|..|-....+.+.+.
T Consensus 56 iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 56 ITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred ccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 344567789999999999999999999999887776653
No 80
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=31.90 E-value=52 Score=18.86 Aligned_cols=17 Identities=18% Similarity=0.471 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHcCC
Q 027814 87 PREIKQAYKHLVLKYHP 103 (218)
Q Consensus 87 ~~eIk~aYr~l~~~~HP 103 (218)
.++.+.+.|+.++.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47789999999999993
No 81
>PHA02602 56 dCTP pyrophosphatase; Provisional
Probab=31.18 E-value=1.8e+02 Score=23.86 Aligned_cols=100 Identities=13% Similarity=0.234 Sum_probs=52.5
Q ss_pred CcchhhhcCCCCCC--CHHHHHHHHHHHHHHcCCCCCCCch-hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 72 TESFYDLLGIPQSV--TPREIKQAYKHLVLKYHPDVSPPER-IDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 72 ~~d~Y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
...|.++|+...+- ..=++.++.......-+|+-++.+. .+.+.+...- ..++..-.+.+.|..|+..|.. +.+
T Consensus 18 ~~~y~~~l~~~~dpLq~m~dmQ~~lq~~l~~~~p~~~~~p~~l~t~ge~l~W-~~~~~~ai~dE~rEL~t~Lggm--sng 94 (172)
T PHA02602 18 ENAYKDILAENKDPLQVMLDMQKSLQVRLANDKPEYNPHPDELKTCGEILDW-LRNQDDYIADETRELYTSLGGM--SNG 94 (172)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccccccCCCchhHHHhhHHHHH-HHHHHHHHHHHHHHHHHHhccc--ccC
Confidence 34577777765543 1223444444333356677665432 2223333222 3445555567889999986532 111
Q ss_pred ccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHhCcC
Q 027814 149 FSSRKPSRYKEGLDDYGTWRIRWQSQLTELKRRSMNKD 186 (218)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~w~~~~~~~~~e~~~r~~~~~ 186 (218)
.-+....|+ .|.+...|.+.+.+...
T Consensus 95 -----------~k~~s~~WK-~Wk~~h~e~rn~~f~~l 120 (172)
T PHA02602 95 -----------EKDASAVWK-PWKANHGEARNRLFSDL 120 (172)
T ss_pred -----------Cccccccch-Hhhhhhhhhhhhhhccc
Confidence 112234566 67777777777766443
No 82
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=30.15 E-value=2.1e+02 Score=20.50 Aligned_cols=33 Identities=21% Similarity=0.098 Sum_probs=26.1
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q 027814 74 SFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVS 106 (218)
Q Consensus 74 d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~ 106 (218)
|--.+.|+.|-++.+||..|-.+.+++..=-..
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~ 36 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRK 36 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCC
Confidence 444567889999999999999999998754433
No 83
>PRK15321 putative type III secretion system effector protein OrgC; Provisional
Probab=28.23 E-value=2.1e+02 Score=21.63 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=26.3
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCc
Q 027814 77 DLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPE 109 (218)
Q Consensus 77 ~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~ 109 (218)
.+|.+++.++.+.+|.+-.++...+.--+++.+
T Consensus 25 ~l~~LP~la~S~~~KD~I~q~m~~F~dp~~G~p 57 (120)
T PRK15321 25 RLLALPESASSETLKDSIYQEMNAFKDPNSGDS 57 (120)
T ss_pred HHHhCCcccCcHHHHHHHHHHHHHhCCCCCCCc
Confidence 478999999999999999999998864344443
No 84
>PF01846 FF: FF domain; InterPro: IPR002713 The FF domain may be involved in protein-protein interaction []. It often occurs as multiple copies and often accompanies WW domains IPR001202 from INTERPRO. PRP40 from yeast encodes a novel, essential splicing component that associates with the yeast U1 small nuclear ribonucleoprotein particle [].; PDB: 3HFH_B 2KIS_A 2DOD_A 2JUC_A 2LKS_A 1UZC_A 2KZG_A 2L9V_A 2DOF_A 2KFD_A ....
Probab=28.02 E-value=1e+02 Score=19.29 Aligned_cols=48 Identities=17% Similarity=0.452 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHc--CChhhHHHHHh
Q 027814 89 EIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETL--SDPNTRALYDN 139 (218)
Q Consensus 89 eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vL--sdp~~R~~YD~ 139 (218)
+.+.+|++|...+. ..+...-..+...+ .=...|..| .+..++..|+.
T Consensus 1 ~a~~~F~~lL~e~~--i~~~s~W~~~~~~l-~~dpry~~i~~~~~~R~~lF~e 50 (51)
T PF01846_consen 1 KAREAFKELLKEHK--ITPYSSWEEVKPKL-SKDPRYKAIGDSESERESLFEE 50 (51)
T ss_dssp HHHHHHHHHHHHTT--S-TTSSHHHHHHHH-TTSCHHHHSTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCC--CCCCCcHHHHHHHH-ccCHHHHHhcCCHHHHHHHHHh
Confidence 46789999888866 44443322222222 112356666 44455555543
No 85
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=27.42 E-value=1.1e+02 Score=22.34 Aligned_cols=51 Identities=20% Similarity=0.455 Sum_probs=32.6
Q ss_pred CCCCCC-CHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhh
Q 027814 80 GIPQSV-TPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHL 141 (218)
Q Consensus 80 gv~~~a-s~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 141 (218)
|++|+. ...+|-+.+..++..+++. + .+.+..|.+.| +.||.-+..||...
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~---~------~~~~~~l~~~y--~~~~~~~~~~~~~~ 102 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG---D------PELLRGLAQMY--VEDPRFAAMYDKKF 102 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS------------HHHHHHHHHHT--TSTHHHHHHHG-GG
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC---C------HHHHHHHHHHH--HcCHHHHhhccccC
Confidence 556654 3455777777777777772 1 25788888888 78999999999433
No 86
>PRK14102 nifW nitrogenase stabilizing/protective protein; Provisional
Probab=24.79 E-value=2.1e+02 Score=21.72 Aligned_cols=57 Identities=16% Similarity=0.475 Sum_probs=34.0
Q ss_pred CCcchhhhcCCCCCC-----CHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHH-HHHHHHHHHc
Q 027814 71 ATESFYDLLGIPQSV-----TPREIKQAYKHLVLKYHPDVSPPERIDENTKRF-IRLQEAYETL 128 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~a-----s~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f-~~I~~AY~vL 128 (218)
...+|++.|||+-+- ..=-|-+.|.+...+.+.+....++ .+....+ ..+.+||+..
T Consensus 13 sAEdFf~ff~v~YDp~vvnV~RLHILkrf~qyl~~~~~~~~~~~e-~~~~~~yr~~L~~AY~dF 75 (105)
T PRK14102 13 DAEDYFQFFELPYDPTVVNVNRLHILKQFSQLIAEIDANFPDLSE-EEKLEKYQLALEEAYQVF 75 (105)
T ss_pred cHHHHHHHhCCCCCcchhhHHHHHHHHHHHHHHHHhccccCCCCH-HHHHHHHHHHHHHHHHHH
Confidence 457999999998643 4445777888877765544322222 2222333 3467777764
No 87
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=21.76 E-value=5.2e+02 Score=23.44 Aligned_cols=26 Identities=15% Similarity=0.337 Sum_probs=21.0
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhCcC
Q 027814 161 LDDYGTWRIRWQSQLTELKRRSMNKD 186 (218)
Q Consensus 161 ~~~~~~w~~~~~~~~~e~~~r~~~~~ 186 (218)
.-+.++|+..|.+.|..+++|....-
T Consensus 317 ~l~~~~W~~~~~~DFA~LI~~AK~~t 342 (391)
T COG5432 317 KLGGGDWEKAYAEDFADLINRAKQST 342 (391)
T ss_pred hhcCchHHHHHHHHHHHHHHHHhccC
Confidence 44567899999999999999976643
No 88
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=21.66 E-value=35 Score=23.19 Aligned_cols=29 Identities=31% Similarity=0.799 Sum_probs=19.9
Q ss_pred CcchhhhcCCCCCCCHHHH-HHHHHHHHHHcCCC
Q 027814 72 TESFYDLLGIPQSVTPREI-KQAYKHLVLKYHPD 104 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eI-k~aYr~l~~~~HPD 104 (218)
..+++++||+++ +++ ......+....|||
T Consensus 5 s~~~~~i~G~~~----~~~~~~~~~~~~~~ihpd 34 (91)
T PF08447_consen 5 SDNFYEIFGYSP----EEIGKPDFEEWLERIHPD 34 (91)
T ss_dssp -THHHHHHTS-H----HHHTCBEHHHHHHHB-TT
T ss_pred eHHHHHHhCCCH----HHhccCCHHHHHhhcCHH
Confidence 357899999864 566 55666778889998
No 89
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=21.16 E-value=1.9e+02 Score=19.54 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=28.8
Q ss_pred HHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHh
Q 027814 92 QAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDN 139 (218)
Q Consensus 92 ~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 139 (218)
+..+...+.-||+... .+..+.|.+.|..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~~-------~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKEN-------RAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3455666677898531 2567889999999998877665554
Done!