Query 027814
Match_columns 218
No_of_seqs 372 out of 1626
Neff 6.8
Searched_HMMs 29240
Date Tue Mar 26 02:50:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.9 5.4E-22 1.8E-26 141.1 8.8 72 73-147 3-74 (77)
2 2ctw_A DNAJ homolog subfamily 99.9 3.4E-22 1.2E-26 151.5 7.6 77 68-146 12-88 (109)
3 2dn9_A DNAJ homolog subfamily 99.9 6.7E-22 2.3E-26 141.2 8.1 73 71-145 5-77 (79)
4 2ctp_A DNAJ homolog subfamily 99.9 9.6E-22 3.3E-26 140.1 8.3 72 71-145 5-76 (78)
5 2ej7_A HCG3 gene; HCG3 protein 99.9 1.2E-21 4E-26 140.9 8.8 74 71-145 7-80 (82)
6 2ctr_A DNAJ homolog subfamily 99.9 1.2E-21 4.2E-26 142.9 8.2 73 71-146 5-77 (88)
7 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.8E-21 6E-26 142.0 8.4 74 68-144 12-85 (88)
8 2yua_A Williams-beuren syndrom 99.8 2.8E-21 9.7E-26 143.9 9.0 73 69-143 13-85 (99)
9 2dmx_A DNAJ homolog subfamily 99.8 2.6E-21 9E-26 142.1 8.7 77 71-148 7-83 (92)
10 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 1.3E-21 4.4E-26 148.1 6.6 92 68-175 10-103 (109)
11 2ctq_A DNAJ homolog subfamily 99.8 3.2E-21 1.1E-25 146.7 8.8 75 70-146 17-91 (112)
12 2och_A Hypothetical protein DN 99.8 4.8E-21 1.6E-25 134.9 8.2 68 70-142 5-72 (73)
13 1wjz_A 1700030A21RIK protein; 99.8 2.4E-21 8.4E-26 142.5 7.0 74 70-143 13-90 (94)
14 2lgw_A DNAJ homolog subfamily 99.8 3.7E-21 1.3E-25 143.5 7.7 75 73-148 2-76 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.8 1E-20 3.4E-25 139.1 7.4 71 71-146 6-76 (92)
16 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.7E-21 2E-25 143.2 3.9 73 73-147 3-75 (103)
17 2l6l_A DNAJ homolog subfamily 99.8 3.2E-19 1.1E-23 142.6 8.1 74 70-143 7-84 (155)
18 3apq_A DNAJ homolog subfamily 99.8 4.4E-19 1.5E-23 146.5 8.4 73 73-147 2-74 (210)
19 1gh6_A Large T antigen; tumor 99.8 8.7E-20 3E-24 139.4 1.7 64 72-141 7-72 (114)
20 3lz8_A Putative chaperone DNAJ 99.8 6.7E-20 2.3E-24 163.2 0.5 71 70-143 25-95 (329)
21 2ys8_A RAB-related GTP-binding 99.7 6E-19 2.1E-23 129.2 4.7 63 70-135 24-86 (90)
22 3hho_A CO-chaperone protein HS 99.7 1.8E-18 6.3E-23 141.1 6.8 71 72-142 3-78 (174)
23 3bvo_A CO-chaperone protein HS 99.7 3.4E-18 1.2E-22 143.1 7.6 72 71-142 41-117 (207)
24 1fpo_A HSC20, chaperone protei 99.7 3.4E-18 1.2E-22 139.1 6.3 69 74-142 2-75 (171)
25 1faf_A Large T antigen; J doma 99.7 2.6E-18 9E-23 123.0 3.6 65 72-143 10-76 (79)
26 2pf4_E Small T antigen; PP2A, 99.7 1.6E-18 5.3E-23 141.3 0.2 65 72-142 10-76 (174)
27 1iur_A KIAA0730 protein; DNAJ 99.7 4.5E-18 1.5E-22 124.3 2.5 66 68-134 11-76 (88)
28 3uo3_A J-type CO-chaperone JAC 99.7 3.6E-17 1.2E-21 134.2 4.3 70 71-145 9-85 (181)
29 1n4c_A Auxilin; four helix bun 99.6 2.1E-17 7.2E-22 135.5 1.8 67 71-137 115-182 (182)
30 2guz_A Mitochondrial import in 99.6 5.5E-17 1.9E-21 113.7 2.7 59 70-134 11-70 (71)
31 2qwo_B Putative tyrosine-prote 99.6 9.2E-17 3.2E-21 118.1 1.9 58 73-130 33-91 (92)
32 3ag7_A Putative uncharacterize 99.6 1.4E-16 4.7E-21 120.2 2.3 62 70-132 38-104 (106)
33 3apo_A DNAJ homolog subfamily 99.6 1.1E-16 3.9E-21 155.0 0.8 78 69-148 17-94 (780)
34 2y4t_A DNAJ homolog subfamily 99.1 4.9E-11 1.7E-15 104.8 5.5 68 72-139 381-449 (450)
35 2guz_B Mitochondrial import in 99.0 2.8E-10 9.5E-15 78.2 4.0 52 73-130 4-58 (65)
36 2pzi_A Probable serine/threoni 87.2 0.32 1.1E-05 45.9 3.1 48 70-127 626-675 (681)
37 2cqn_A Formin-binding protein 74.8 9.1 0.00031 26.2 6.1 57 85-142 6-63 (77)
38 2b7e_A PRE-mRNA processing pro 44.9 60 0.002 21.1 5.5 50 88-142 3-57 (59)
39 1qqr_A Streptokinase domain B; 29.4 22 0.00077 27.0 1.6 32 74-105 33-64 (138)
40 1uzc_A Hypothetical protein FL 25.5 1.1E+02 0.0038 20.3 4.5 55 84-143 11-68 (71)
41 4a3n_A Transcription factor SO 20.0 1.1E+02 0.0038 19.3 3.6 41 91-138 14-54 (71)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.86 E-value=5.4e-22 Score=141.10 Aligned_cols=72 Identities=33% Similarity=0.646 Sum_probs=66.5
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI 147 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 147 (218)
.|||+||||+++++.++||++|++|++++|||+++.. .+.+.|+.|++||++|+||.+|..||.++..|...
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP---GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT---THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 6899999999999999999999999999999998754 56789999999999999999999999999887653
No 2
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=3.4e-22 Score=151.50 Aligned_cols=77 Identities=36% Similarity=0.695 Sum_probs=69.7
Q ss_pred cCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 68 LSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
+.....+||+||||+++|+.++||++|++|+++||||+++.. +.+.+.|++|++||+||+||.+|..||.++..|..
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN--PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC--HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 345678999999999999999999999999999999999764 46789999999999999999999999999887654
No 3
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=6.7e-22 Score=141.18 Aligned_cols=73 Identities=38% Similarity=0.691 Sum_probs=66.4
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
...|||+||||+++++.++||++|++|+++||||+++.. +.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD--PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC--TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 467999999999999999999999999999999998754 3577899999999999999999999999886543
No 4
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=9.6e-22 Score=140.11 Aligned_cols=72 Identities=32% Similarity=0.655 Sum_probs=66.2
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
...|||+||||+++++.++||++|++|+++||||+++.. .+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP---GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH---HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 467999999999999999999999999999999998754 677899999999999999999999999887654
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=140.88 Aligned_cols=74 Identities=38% Similarity=0.723 Sum_probs=67.3
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
...+||+||||+++++.++||++|++|+++||||+++.. .+.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEN-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTT-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 457999999999999999999999999999999998754 24678899999999999999999999999987654
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=142.87 Aligned_cols=73 Identities=41% Similarity=0.732 Sum_probs=67.2
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...+||+||||+++++.++||++|++|+++||||+++.. .+.+.|++|++||++|+||.+|..||.++..++.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP---DAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH---HHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 457999999999999999999999999999999999743 6789999999999999999999999999877654
No 7
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=1.8e-21 Score=142.01 Aligned_cols=74 Identities=35% Similarity=0.569 Sum_probs=67.1
Q ss_pred cCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcC
Q 027814 68 LSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATG 144 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~ 144 (218)
......|||+||||+++++.++||++|++|+++||||+++.. .+.+.|++|++||++|+||.+|..||.++..+
T Consensus 12 ~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP---GAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST---THHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred hccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh---hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 344578999999999999999999999999999999998764 56789999999999999999999999988654
No 8
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.8e-21 Score=143.91 Aligned_cols=73 Identities=37% Similarity=0.642 Sum_probs=66.3
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
.....+||+||||+++++.++||++|++|+++||||+++.. +.+.+.|++|++||+||+||.+|..||..+..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS--AEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC--SHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 34678999999999999999999999999999999999754 46789999999999999999999999997654
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=2.6e-21 Score=142.05 Aligned_cols=77 Identities=38% Similarity=0.710 Sum_probs=69.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
...+||+||||+++++.++||++|++|+++||||+++.. .+.+.+.|++|++||++|+||.+|..||.++..+....
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDN-KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSC-SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 457999999999999999999999999999999998754 24778999999999999999999999999988766543
No 10
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.84 E-value=1.3e-21 Score=148.07 Aligned_cols=92 Identities=26% Similarity=0.391 Sum_probs=77.3
Q ss_pred cCCCCcchhhhcCCCCCC-CHHHHHHHHHHHHHHcCCCCCCC-chhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCC
Q 027814 68 LSAATESFYDLLGIPQSV-TPREIKQAYKHLVLKYHPDVSPP-ERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGS 145 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~a-s~~eIk~aYr~l~~~~HPDk~~~-~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~ 145 (218)
......+||+||||++++ +.++||++|++|+++||||+++. ...+.+.+.|++|++||++|+||.+|..||.++....
T Consensus 10 ~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~ 89 (109)
T 2qsa_A 10 LYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPD 89 (109)
T ss_dssp STTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTT
T ss_pred HHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCch
Confidence 345678999999999999 99999999999999999999875 3345788999999999999999999999999875311
Q ss_pred cccccCCCCCCCCCCCCCchhHHHHHHHHH
Q 027814 146 FIAFSSRKPSRYKEGLDDYGTWRIRWQSQL 175 (218)
Q Consensus 146 ~~~~~~~~~~~~~e~~~~~~~w~~~~~~~~ 175 (218)
+.+..|..+|+..+
T Consensus 90 ----------------~~~~~~~~~~~~~~ 103 (109)
T 2qsa_A 90 ----------------QRFYNYYQYYRLRA 103 (109)
T ss_dssp ----------------CHHHHHHHHHHHC-
T ss_pred ----------------HHHHHHHHHHHHHh
Confidence 23567888887655
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=146.73 Aligned_cols=75 Identities=31% Similarity=0.483 Sum_probs=68.6
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
....|||+||||+++|+.++||++|++|+++||||+++.. +.+.+.|++|++||+||+||.+|..||.++..++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN--PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC--STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 4568999999999999999999999999999999999754 36789999999999999999999999999987663
No 12
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.84 E-value=4.8e-21 Score=134.89 Aligned_cols=68 Identities=35% Similarity=0.743 Sum_probs=61.6
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
....+||+||||+++++.++||++|++|++++|||+++.. .+.|+.|++||++|+||.+|..||.+|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG-----AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC-----HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH-----HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3568999999999999999999999999999999998653 3789999999999999999999999864
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.84 E-value=2.4e-21 Score=142.50 Aligned_cols=74 Identities=28% Similarity=0.595 Sum_probs=66.5
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCC----chhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPP----ERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~----~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
+...+||+||||+++++.++||++|++|+++||||+++. .....+.+.|++|++||+||+||.+|..||..+..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 457899999999999999999999999999999999863 22357889999999999999999999999998764
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.84 E-value=3.7e-21 Score=143.50 Aligned_cols=75 Identities=36% Similarity=0.658 Sum_probs=65.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
.|||+||||+++++.++||++|++|+++||||+++.. .+.+.+.|+.|++||++|+||.+|..||.++..+....
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~ 76 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDN-KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGT 76 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSC-CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCcc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 5899999999999999999999999999999998754 24678999999999999999999999999998876543
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1e-20 Score=139.12 Aligned_cols=71 Identities=37% Similarity=0.697 Sum_probs=65.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCc
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSF 146 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~ 146 (218)
...+||+||||+++++.++||++|++|+++||||+++.. .+.|++|++||++|+||.+|..||.++..+..
T Consensus 6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD-----TEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC-----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh-----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 568999999999999999999999999999999998654 25899999999999999999999999877654
No 16
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.81 E-value=5.7e-21 Score=143.16 Aligned_cols=73 Identities=37% Similarity=0.696 Sum_probs=67.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI 147 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 147 (218)
.+||+||||+++++.++||++|++|+++||||+++.. +.+.+.|++|++||++|+||.+|..||.++..+...
T Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD--KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT--CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 6899999999999999999999999999999998754 357789999999999999999999999999887653
No 17
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=3.2e-19 Score=142.62 Aligned_cols=74 Identities=28% Similarity=0.616 Sum_probs=65.8
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCc----hhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPE----RIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~----~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
....|||+||||+++++.++||++|++|++++|||+++.. .++.+.+.|+.|++||+||+||.+|+.||..+..
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 3467999999999999999999999999999999998654 2345789999999999999999999999987754
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=4.4e-19 Score=146.47 Aligned_cols=73 Identities=38% Similarity=0.684 Sum_probs=66.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCcc
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFI 147 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~ 147 (218)
.|||+||||+++|+.++||+|||+|+++||||+++.. +++.++|+.|++||++|+||.+|..||.++..+...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~--~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC--TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999754 367899999999999999999999999999876643
No 19
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.76 E-value=8.7e-20 Score=139.41 Aligned_cols=64 Identities=22% Similarity=0.358 Sum_probs=59.5
Q ss_pred CcchhhhcCCCCCCCH--HHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhh
Q 027814 72 TESFYDLLGIPQSVTP--REIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHL 141 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~--~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~ 141 (218)
..+||+||||+++++. ++||+|||+|+++||||+++.. ++|++|++||+||+||.+|+.||.++
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~------e~f~~I~~AYevL~d~~~R~~~~~~~ 72 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFG 72 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT------TTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccH------HHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence 4689999999999998 9999999999999999998753 68999999999999999999999865
No 20
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.75 E-value=6.7e-20 Score=163.17 Aligned_cols=71 Identities=37% Similarity=0.632 Sum_probs=0.0
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
+...|||+||||+++|+.++||+|||+|+++||||+++.. .+.++|++|++||++|+||.+|+.||+++..
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN---DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp --------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh---HHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 4568999999999999999999999999999999998754 6778999999999999999999999998544
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=6e-19 Score=129.18 Aligned_cols=63 Identities=21% Similarity=0.379 Sum_probs=57.3
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHH
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRA 135 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~ 135 (218)
....|||+||||+++++.++||++|++|+++||||+++.. .+.+.|++|++||++|+||.+|.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~---~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP---GSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT---THHHHHHHHHHHHHHHHHHHCCS
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHHCCccccc
Confidence 3568999999999999999999999999999999999754 56788999999999999998774
No 22
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.74 E-value=1.8e-18 Score=141.06 Aligned_cols=71 Identities=24% Similarity=0.450 Sum_probs=63.1
Q ss_pred CcchhhhcCCCCCCC--HHHHHHHHHHHHHHcCCCCCCCchh---hHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 72 TESFYDLLGIPQSVT--PREIKQAYKHLVLKYHPDVSPPERI---DENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as--~~eIk~aYr~l~~~~HPDk~~~~~~---~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
..|||+||||+++++ .++||++||+|+++||||+++.... ..+.+.|..|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 579999999999887 9999999999999999999865432 2377899999999999999999999999875
No 23
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.73 E-value=3.4e-18 Score=143.07 Aligned_cols=72 Identities=28% Similarity=0.436 Sum_probs=63.2
Q ss_pred CCcchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCch---hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 71 ATESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPER---IDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
...|||+||||+++ ++.++||++||+|+++||||+++... +..+.++|+.|++||+||+||.+|+.||..+.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 45799999999986 78999999999999999999986532 33567899999999999999999999998654
No 24
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.72 E-value=3.4e-18 Score=139.15 Aligned_cols=69 Identities=23% Similarity=0.435 Sum_probs=62.5
Q ss_pred chhhhcCCCCCC--CHHHHHHHHHHHHHHcCCCCCCCch---hhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 74 SFYDLLGIPQSV--TPREIKQAYKHLVLKYHPDVSPPER---IDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 74 d~Y~iLgv~~~a--s~~eIk~aYr~l~~~~HPDk~~~~~---~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
|||+||||++++ +..+||++|++|+++||||+++... +..+.+.|..|++||+||+||.+|+.||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 899999999999 9999999999999999999986542 23467899999999999999999999999875
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.71 E-value=2.6e-18 Score=122.97 Aligned_cols=65 Identities=25% Similarity=0.299 Sum_probs=57.3
Q ss_pred CcchhhhcCCCCC--CCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 72 TESFYDLLGIPQS--VTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 72 ~~d~Y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
..++|+||||+++ ++.++||++||+|+++||||+++.. +.|++|++||++|+|+.+|..+ .++..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~------~~f~~i~~AYe~L~~~~~r~~~-~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH------ALMQELNSLWGTFKTEVYNLRM-NLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCH------HHHHHHHHHHHHHHHHHHHHTT-CCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCH------HHHHHHHHHHHHHhhHHHHHHH-hcCCc
Confidence 4689999999999 9999999999999999999998643 6899999999999999999883 44443
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.69 E-value=1.6e-18 Score=141.32 Aligned_cols=65 Identities=22% Similarity=0.350 Sum_probs=57.9
Q ss_pred CcchhhhcCCCCCCC--HHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhh
Q 027814 72 TESFYDLLGIPQSVT--PREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLA 142 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as--~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~ 142 (218)
..+||+||||+++|+ .++||+|||++++++|||+++.. ++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~------e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE------EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC------TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH------HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 479999999999998 69999999999999999998754 579999999999999999999999885
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.69 E-value=4.5e-18 Score=124.25 Aligned_cols=66 Identities=21% Similarity=0.301 Sum_probs=58.5
Q ss_pred cCCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhH
Q 027814 68 LSAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTR 134 (218)
Q Consensus 68 ~~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R 134 (218)
.+....++|+||||+++|+.++||++|++|+++||||+++... +.+.++|++|++||++|+|...|
T Consensus 11 ~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~-~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 11 RGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENH-DIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp SSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCH-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-HHHHHHHHHHHHHHHHHHhhccc
Confidence 3456689999999999999999999999999999999987653 46889999999999999997655
No 28
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.66 E-value=3.6e-17 Score=134.20 Aligned_cols=70 Identities=29% Similarity=0.561 Sum_probs=61.9
Q ss_pred CCcchhhhc------CCCC-CCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhc
Q 027814 71 ATESFYDLL------GIPQ-SVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLAT 143 (218)
Q Consensus 71 ~~~d~Y~iL------gv~~-~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~ 143 (218)
...|||+|| |+++ +++.++||++||+|+++||||+++. +.+.|+.|++||+||+||.+|..||..+..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~ 83 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-----GSEQSSTLNQAYHTLKDPLRRSQYMLKLLR 83 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-----CSSGGGSHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-----HHHHHHHHHHHHHHHcChHHHHHHHHHHHh
Confidence 457999999 4665 8999999999999999999999875 346899999999999999999999998844
Q ss_pred CC
Q 027814 144 GS 145 (218)
Q Consensus 144 ~~ 145 (218)
|.
T Consensus 84 g~ 85 (181)
T 3uo3_A 84 NI 85 (181)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.65 E-value=2.1e-17 Score=135.47 Aligned_cols=67 Identities=27% Similarity=0.534 Sum_probs=59.5
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchh-hHHHHHHHHHHHHHHHcCChhhHHHH
Q 027814 71 ATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERI-DENTKRFIRLQEAYETLSDPNTRALY 137 (218)
Q Consensus 71 ~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~-~~a~~~f~~I~~AY~vLsdp~~R~~Y 137 (218)
...+||+||||+++|+.++||++||+|+++||||+++.... +.+.+.|+.|++||+||+||.+|..|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 34699999999999999999999999999999999865432 23789999999999999999999876
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.64 E-value=5.5e-17 Score=113.73 Aligned_cols=59 Identities=17% Similarity=0.328 Sum_probs=52.0
Q ss_pred CCCcchhhhcCCCC-CCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhH
Q 027814 70 AATESFYDLLGIPQ-SVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTR 134 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~-~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R 134 (218)
+...++|+||||++ +++.++||++|++|++++|||+++.. +.|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~------~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP------FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH------HHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH------HHHHHHHHHHHHHhhhhhc
Confidence 34579999999999 79999999999999999999997543 5899999999999987554
No 31
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=9.2e-17 Score=118.10 Aligned_cols=58 Identities=24% Similarity=0.478 Sum_probs=51.8
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchh-hHHHHHHHHHHHHHHHcCC
Q 027814 73 ESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERI-DENTKRFIRLQEAYETLSD 130 (218)
Q Consensus 73 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~-~~a~~~f~~I~~AY~vLsd 130 (218)
.++|++|||++.|+.++||+|||+++++||||+++.... ..+.+.|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999875432 3578899999999999964
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=1.4e-16 Score=120.16 Aligned_cols=62 Identities=18% Similarity=0.266 Sum_probs=53.3
Q ss_pred CCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCc-----hhhHHHHHHHHHHHHHHHcCChh
Q 027814 70 AATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPE-----RIDENTKRFIRLQEAYETLSDPN 132 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~-----~~~~a~~~f~~I~~AY~vLsdp~ 132 (218)
....+||+|||++. |+.++||+|||+++++||||+++.. ....+.++|+.|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 34579999999996 9999999999999999999997531 22357899999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.59 E-value=1.1e-16 Score=154.96 Aligned_cols=78 Identities=36% Similarity=0.635 Sum_probs=40.9
Q ss_pred CCCCcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHHhhhhcCCccc
Q 027814 69 SAATESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYDNHLATGSFIA 148 (218)
Q Consensus 69 ~~~~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD~~~~~~~~~~ 148 (218)
.....|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|..||++|..|....
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~--~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN--PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 34568999999999999999999999999999999998654 3677899999999999999999999999998766543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.11 E-value=4.9e-11 Score=104.82 Aligned_cols=68 Identities=35% Similarity=0.684 Sum_probs=57.4
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCch-hhHHHHHHHHHHHHHHHcCChhhHHHHHh
Q 027814 72 TESFYDLLGIPQSVTPREIKQAYKHLVLKYHPDVSPPER-IDENTKRFIRLQEAYETLSDPNTRALYDN 139 (218)
Q Consensus 72 ~~d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~-~~~a~~~f~~I~~AY~vLsdp~~R~~YD~ 139 (218)
..++|.+||+...++.++|+++|+++++++|||+.+.+. ++.+.+.|+.|++||++|+||++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999999999999999999987543 45688999999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.8e-10 Score=78.22 Aligned_cols=52 Identities=15% Similarity=0.101 Sum_probs=46.6
Q ss_pred cchhhhcCCCCC---CCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCC
Q 027814 73 ESFYDLLGIPQS---VTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSD 130 (218)
Q Consensus 73 ~d~Y~iLgv~~~---as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsd 130 (218)
...|.||||+++ ++.++|+++|++|...+|||+++.. .....|++|+++|..
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~------yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF------YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH------HHHHHHHHHHHHHHH
Confidence 467999999999 9999999999999999999998665 568899999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.15 E-value=0.32 Score=45.91 Aligned_cols=48 Identities=15% Similarity=0.206 Sum_probs=37.4
Q ss_pred CCCcchhhhcCCCCCCCH--HHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHH
Q 027814 70 AATESFYDLLGIPQSVTP--REIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYET 127 (218)
Q Consensus 70 ~~~~d~Y~iLgv~~~as~--~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~v 127 (218)
....+||.|||++.+... .+|+++||+|++..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHhccc
Confidence 445669999999766654 67999999999976554 2578888888876
No 37
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=74.79 E-value=9.1 Score=26.22 Aligned_cols=57 Identities=12% Similarity=0.341 Sum_probs=44.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCC-hhhHHHHHhhhh
Q 027814 85 VTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSD-PNTRALYDNHLA 142 (218)
Q Consensus 85 as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsd-p~~R~~YD~~~~ 142 (218)
.-+..++..|+.+.+...|.......-+.+..+|.... +|..+.+ ..++.+|+.|+.
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~ 63 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMH 63 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHH
Confidence 34677999999999998888877766667777776655 7999976 477778887764
No 38
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=44.91 E-value=60 Score=21.06 Aligned_cols=50 Identities=14% Similarity=0.306 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHH---HHHHHHcCC-hh-hHHHHHhhhh
Q 027814 88 REIKQAYKHLVLKYHPDVSPPERIDENTKRFIRL---QEAYETLSD-PN-TRALYDNHLA 142 (218)
Q Consensus 88 ~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I---~~AY~vLsd-p~-~R~~YD~~~~ 142 (218)
+|..++|.+|.+...=|-. -.-+ +....| ..-|.+|.| |. ++..|+.|+.
T Consensus 3 eEae~aF~~lL~~~~V~s~--wswe---qamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDST--WSFS---RIISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHTTCCSS--CCHH---HHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCC--CcHH---HHHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 5678999999998754432 2222 334444 458999997 64 7888998864
No 39
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=29.39 E-value=22 Score=27.04 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=28.8
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Q 027814 74 SFYDLLGIPQSVTPREIKQAYKHLVLKYHPDV 105 (218)
Q Consensus 74 d~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk 105 (218)
-++..|.|....+.+|++++=..+..++|||-
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 45788889999999999999999999999993
No 40
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=25.49 E-value=1.1e+02 Score=20.28 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCCchhhHHHHHHHHH--HHHHHHcCC-hhhHHHHHhhhhc
Q 027814 84 SVTPREIKQAYKHLVLKYHPDVSPPERIDENTKRFIRL--QEAYETLSD-PNTRALYDNHLAT 143 (218)
Q Consensus 84 ~as~~eIk~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I--~~AY~vLsd-p~~R~~YD~~~~~ 143 (218)
-++.++.+.+|++|...++-+ +...-+.+. ..| ..-|.+|.+ -+++..|+.|...
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~--~~~tWe~~~---~~i~~DpRY~al~~~~eRk~~F~ey~~~ 68 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVP--SNASWEQAM---KMIINDPRYSALAKLSEKKQAFNAYKVQ 68 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCC--TTCCHHHHH---HHHHTSGGGGGCSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcC--CCCCHHHHH---HHHccCccccccCCHHHHHHHHHHHHHH
Confidence 468999999999999998643 333222222 222 236777776 4677778877653
No 41
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.02 E-value=1.1e+02 Score=19.28 Aligned_cols=41 Identities=15% Similarity=0.279 Sum_probs=29.0
Q ss_pred HHHHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHcCChhhHHHHH
Q 027814 91 KQAYKHLVLKYHPDVSPPERIDENTKRFIRLQEAYETLSDPNTRALYD 138 (218)
Q Consensus 91 k~aYr~l~~~~HPDk~~~~~~~~a~~~f~~I~~AY~vLsdp~~R~~YD 138 (218)
.+.++..++.-||+.. ..+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~-------~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH-------NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC-------HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4566777778888854 2356788999999999766554444
Done!